Pregenerated sensors for VEPH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027831Ensembl transcript IDs: ENSMUST00000029419.8
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTCTaGGCAGAGGACCTCATAGCTCCGAACAAGGTGATGGTGGGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: CIVSVGAGLHLIPAL*AEDLIAPNKVMVGW Trigger: CCAGCCCACCATCACCTTGTTCGGAGCTATGAGGTCCTCTGCTCAGAGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR GCA 90 bp | GTCAGTTATGGGGCTAGAACTCAGGCAATCTGGCTTGGCAGCAAGTaGCCTTTACCTGCTGAGCCTTCCTGCTGGCCCCACTCACTGTTT | + |
|
Preference number: 1 (lower is better) Translates to: VSYGARTQAIWLGSK*PLPAEPSCWPHSLF Trigger: AAACAGTGAGTGGGGCCAGCAGGAAGGCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCAGATTGCCTGAGTTCTAGCCCCATAACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 90 bp | GGCGGAGCCTTGGTAGAGGAAGTACATCGATGGAGGTGGGCCTTGTaGTTTATTACCACACCCTACTTCCCACCTTCACTGCTTCCTCGG | + |
|
Preference number: 1 (lower is better) Translates to: GGALVEEVHRWRWAL*FITTPYFPPSLLPR Trigger: CCGAGGAAGCAGTGAAGGTGGGAAGTAGGGTGTGGTAATAAACCACAAGGCCCACCTCCATCGATGTACTTCCTCTACCAAGGCTCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 90 bp | TTCTTTTATTCGCAGCGTTCCCTTTCTGGCCCACACGATCCACTGTaGACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCAGAAAACT | + |
|
Preference number: 1 (lower is better) Translates to: FFYSQRSLSGPHDPL*TPWPLFLMNFRQKT Trigger: AGTTTTCTGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGGCCAGAAAGGGAACGCTGCGAATAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 90 bp | AAGAATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTaGTGCCATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAA | + |
|
Preference number: 1 (lower is better) Translates to: KNQPASCSCCCAFSA*CHVFPDTMDSIPLE Trigger: TTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGATTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 90 bp | AATCACATAGCTACAGAAGTTCTTTTATTCGCAGCGTTCCCTTTCTaGCCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCAT | + |
|
Preference number: 1 (lower is better) Translates to: NHIATEVLLFAAFPF*PTRSTVNSVASLSH Trigger: ATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGGCCAGAAAGGGAACGCTGCGAATAAAAGAACTTCTGTAGCTATGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 90 bp | TATGGGGGCCCTTCTTGTCCAAACTACCATATGGAGTTTCTCACTTaGTCAGAAGTTCATGACTTCAGTTGGACTGATGGCCAAGGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: YGGPSCPNYHMEFLT*SEVHDFSWTDGQGA Trigger: AGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCAAGTGAGAAACTCCATATGGTAGTTTGGACAAGAAGGGCCCCCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 90 bp | GAAAACTTGGAGTTAATACCAGAGTTGCGAGGGCGTGAGGTTTACTaGGAACCCTGCCATTTTAGGCTCTCCTTAGGGATAATGGTTTCC | + |
|
Preference number: 1 (lower is better) Translates to: ENLELIPELRGREVY*EPCHFRLSLGIMVS Trigger: GGAAACCATTATCCCTAAGGAGAGCCTAAAATGGCAGGGTTCTCAGTAAACCTCACGCCCTCGCAACTCTGGTATTAACTCCAAGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 90 bp | TACCATATGGAGTTTCTCACTTGGTCAGAAGTTCATGACTTCAGTTaGACTGATGGCCAAGGAGCTCTTGGGATGTACTTGCCTCCAACT | + |
|
Preference number: 1 (lower is better) Translates to: YHMEFLTWSEVHDFS*TDGQGALGMYLPPT Trigger: AGTTGGAGGCAAGTACATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCAAGTGAGAAACTCCATATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 90 bp | CTGCCTGGTGCCATGTATTCCCTGACACAATGGACTCCATCCCTCTaGAACCATAAACAAAATAAATCCTTTCGCCTGTACGCTATTTTC | + |
|
Preference number: 1 (lower is better) Translates to: LPGAMYSLTQWTPSL*NHKQNKSFRLYAIF Trigger: GAAAATAGCGTACAGGCGAAAGGATTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACATGGCACCAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 90 bp | TCCATTTCTTTCACAATTACCTACATATGCAGTGGACCCAAAATTTaGCCTCTTGAACTCTATTTCCAGCGTGTAATAATTTCTGTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: SISFTITYICSGPKI*PLELYFQRVIISVA Trigger: AGCCACAGAAATTATTACACGCTGGAAATAGAGTTCAAGAGGTCAAATTTTGGGTCCACTGCATATGTAGGTAATTGTGAAAGAAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR GCA 90 bp | AATCCAGCAGTCGATTACTACAGCACATCGAAAGTTAACTTTTACTaGATTGTTCCAATGAAATTGTTCTTACTAGTGACATCAATTGCT | + |
|
Preference number: 1 (lower is better) Translates to: NPAVDYYSTSKVNFY*IVPMKLFLLVTSIA Trigger: AGCAATTGATGTCACTAGTAAGAACAATTTCATTGGAACAATGCAGTAAAAGTTAACTTTCGATGTGCTGTAGTAATCGACTGCTGGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 90 bp | GGGGGCGGAGCCTTGGTAGAGGAAGTACATCGATGGAGGTGGGCCTaGTGGTTTATTACCACACCCTACTTCCCACCTTCACTGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GGGALVEEVHRWRWA*WFITTPYFPPSLLP Trigger: AGGAAGCAGTGAAGGTGGGAAGTAGGGTGTGGTAATAAACCACAAGGCCCACCTCCATCGATGTACTTCCTCTACCAAGGCTCCGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 90 bp | CATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTTGGGATGTACTaGCCTCCAACTCCCAGTGCAGGGAGAGTTACAGGCCCCCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HDFSWTDGQGALGMY*PPTPSAGRVTGPQS Trigger: GCTTTGGGGGCCTGTAACTCTCCCTGCACTGGGAGTTGGAGGCAAGTACATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 90 bp | GCAGAGGCAGGTGGTAGGGTGGCTAACTTGAAACGCTATGGGCTTTaGAACCCTCAAAGCCCACCCACCAGTGACACACCTTCTCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: AEAGGRVANLKRYGL*NPQSPPTSDTPSPT Trigger: TGTTGGAGAAGGTGTGTCACTGGTGGGTGGGCTTTGAGGGTTCAAAAGCCCATAGCGTTTCAAGTTAGCCACCCTACCACCTGCCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 90 bp | ATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTaGAAACGCTATGGGCTTTTGAACCCTCAAAGCCCACCCACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: MRHNHVAEAGGRVAN*KRYGLLNPQSPPTS Trigger: ACTGGTGGGTGGGCTTTGAGGGTTCAAAAGCCCATAGCGTTTCAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTGTTACTGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTAGAGTTGCGAGGGCGTaGGGTTTACTGAGAACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TLLLHSFCGGRTPSYPGPRVARA*GLLRTL Trigger: CAGGGTTCTCAGTAAACCTCACGCCCTCGCAACTCT...AGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCAGTAACAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 90 bp | GGTCAGAAGTTCATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTaGGGATGTACTTGCCTCCAACTCCCAGTGCAGGGAGAGTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: GQKFMTSVGLMAKEL*GCTCLQLPVQGELQ Trigger: CTGTAACTCTCCCTGCACTGGGAGTTGGAGGCAAGTACATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGAGGCAAGCTCTCTCATaGTTGAAACATTTCTCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: CIMRHNHVAEAGGRVANLRQALS*LKHFSG Trigger: GCCGGAGAAATGTTTCAATCATGAGAGAGCTTGCCT...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAGGATAAATATATTTCCATCATGGCAGAGAGCATGGCAGTAGGCAGGCATCTGGGATTAAAGGCATaGGCCACCACTGCCTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SEDKYISIMAESMAVGRHLGLKA*ATTAWL Trigger: GAGCCAGGCAGTGGTGGCGCATGCCTTTAATCCCAG...ATGCCTGCCTACTGCCATGCTCTCTGCCATGATGGAAATATATTTATCCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATTGTTACTGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTGCTTTTTCTGCCTGGTaGCATGTATTCCCTGACACA | + |
|
Preference number: 2 (lower is better) Translates to: TLLLHSFCGGRTPSYPGPAFSAW*HVFPDT Trigger: TGTGTCAGGGAATACATGGCACCAGGCAGAAAAAGC...AGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCAGTAACAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCTATGGGGGCCCTTCTTGTCCAAACTACCATATGGAGTTTCTCACTTGGTCTAGTCGGCCATCACTaGAAAGAGAGGCCCATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: KPMGALLVQTTIWSFSLGLVGHH*KERPIG Trigger: ACCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAG...ACCAAGTGAGAAACTCCATATGGTAGTTTGGACAAGAAGGGCCCCCATAGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTGTTACTGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTGGCCTCTCTTTCTCATaGACTTCAGGCAGAAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: TLLLHSFCGGRTPSYPGPGLSFS*TSGRKL Trigger: AAGTTTTCTGCCTGAAGTTCATGAGAAAGAGAGGCC...AGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCAGTAACAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATTGTTACTGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTACTTCCCACCTTCACTaGTTCCTCGGTCTAAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLLLHSFCGGRTPSYPGPTSHLH*FLGLNK Trigger: CTTATTTAGACCGAGGAAGCAGTGAAGGTGGGAAGT...AGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCAGTAACAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCTATGGGGGCCCTTCTTGTCCAAACTACCATATGGAGTTTCTCACTTGGTTATTCCCTGACACAATaGACTCCATCCCTCTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KPMGALLVQTTIWSFSLGYSLTQ*TPSLWN Trigger: GTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATA...ACCAAGTGAGAAACTCCATATGGTAGTTTGGACAAGAAGGGCCCCCATAGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATTAGATGTGCCATGGCATaGAGAAAACAGAGGAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: SASILFLLLCFFCLVPCIRCAMA*RKQRKT Trigger: GGTTTTCCTCTGTTTTCTGCATGCCATGGCACATCT...AATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAATGGCTTGGCAGCAAGTaGCCTTTACCTGCTGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKWLGSK*PLPAEP Trigger: AGGCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCA...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAGGATAAATATATTTCCATCATGGCAGAGAGCATGGCAGTAGGCAGGCATCATGCAAACTGTATATaGCCCAGTACAGGGGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: SEDKYISIMAESMAVGRHHANCI*PSTGEC Trigger: GCATTCCCCTGTACTGGGGCATATACAGTTTGCATG...ATGCCTGCCTACTGCCATGCTCTCTGCCATGATGGAAATATATTTATCCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGCACCTAAACTGCCTATaGCAGCTTAATTCAAAATTA | + |
|
Preference number: 2 (lower is better) Translates to: CIMRHNHVAEAGGRVANLHLNCL*QLNSKL Trigger: TAATTTTGAATTAAGCTGCCATAGGCAGTTTAGGTG...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCTATGGGGGCCCTTCTTGTCCAAACTACCATATGGAGTTTCTCACTTGGTAGGACTTCAAATTGCTaGCATCCTGAAAATCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KPMGALLVQTTIWSFSLGRTSNC*HPENPS Trigger: AGAAGGATTTTCAGGATGTCAGCAATTTGAAGTCCT...ACCAAGTGAGAAACTCCATATGGTAGTTTGGACAAGAAGGGCCCCCATAGGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAGGATAAATATATTTCCATCATGGCAGAGAGCATGGCAGTAGGCAGGCATACCATTCATCTATTCTaGTCTTTCACCTTAACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SEDKYISIMAESMAVGRHTIHLF*SFTLTP Trigger: TGGGGTTAAGGTGAAAGAGCAGAATAGATGAATGGT...ATGCCTGCCTACTGCCATGCTCTCTGCCATGATGGAAATATATTTATCCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTTTTTAAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCTGGGTTCCTCTTTGTTaGCACTGGCAATGCTTATCT | + |
|
Preference number: 2 (lower is better) Translates to: MVFKLLSLAAYVSKDGLVWVPLC*HWQCLS Trigger: AGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCA...GACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTTAAAAACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACCACATGGTTTGCATTTAAAGCAGGATACATTGTTACTGCATAGTTTCTGTATATGCTCACATATTTaGATGCGTGGCCCCATTGTA | + |
|
Preference number: 2 (lower is better) Translates to: SPHGLHLKQDTLLLHSFCICSHI*MRGPIV Trigger: TACAATGGGGCCACGCATTCAAATATGTGAGCATAT...ACAGAAACTATGCAGTAACAATGTATCCTGCTTTAAATGCAAACCATGTGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACCACATGGTTTGCATTTAAAGCAGGATACATTGTTACTGCATAGTTTCTGTTGGACTCCATCCCTCTaGAACCATAAACAAAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: SPHGLHLKQDTLLLHSFCWTPSL*NHKQNK Trigger: TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCA...ACAGAAACTATGCAGTAACAATGTATCCTGCTTTAAATGCAAACCATGTGGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 72 bp | TCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTCTaGGCAGAGGACCTCATAGCTCCGAACAAGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: SVGAGLHLIPAL*AEDLIAPNKVM Trigger: CATCACCTTGTTCGGAGCTATGAGGTCCTCTGCTCAGAGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 72 bp | TGGATCCCGAGAGGCTCACTGTTGTTCAGGGTCACGTaGATGTTGGCACAGGCTCACTCCTTGCCTTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WIPRGSLLFRVT*MLAQAHSLPCS Trigger: GCTGCAAGGCAAGGAGTGAGCCTGTGCCAACATCCACGTGACCCTGAACAACAGTGAGCCTCTCGGGATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGCCGAGAGGCTCACTGTaGTTCAGGGTCACGTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: CIMRHNHVAEAGGRVANLPRGSL*FRVTWM Trigger: CATCCACGTGACCCTGAACAACAGTGAGCCTCTCGG...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 72 bp | GGCAATCTGGCTTGGCAGCAAGTGCCCTTTACCTGCTaGGCCTTCCTGCTGGCCCCACTCACTGTTTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GNLAWQQVPFTC*AFLLAPLTVFL Trigger: TAAGAAAACAGTGAGTGGGGCCAGCAGGAAGGCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCAGATTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 72 bp | CTATGGGCTTTTGAACCCTCAAAGCCCACCCACCAGTaGCACACCTTCTCCAACAAGACCACGCCTTCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LWAFEPSKPTHQ*HTFSNKTTPSD Trigger: ATCCGAAGGCGTGGTCTTGTTGGAGAAGGTGTGTCACTGGTGGGTGGGCTTTGAGGGTTCAAAAGCCCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 72 bp | CACCAAGTCAGTTATGGGGCTAGAACTCAGGCAATCTaGCTTGGCAGCAAGTGCCCTTTACCTGCTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HQVSYGARTQAI*LGSKCPLPAEP Trigger: AGGCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCAGATTGCCTGAGTTCTAGCCCCATAACTGACTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 72 bp | TGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTaGTCATGCAAACTGTATATGCCCCAGTACAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPSRPSLEREAH*SCKLYMPQYRG Trigger: TCCCCTGTACTGGGGCATATACAGTTTGCATGACCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR GCA 72 bp | GTCACGTGGATGTTGGCACAGGCTCACTCCTTGCCTTaGAGCGATAGTTCCGTGGCAGCTTATTCAAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VTWMLAQAHSLP*SDSSVAAYSSS Trigger: TGAACTTGAATAAGCTGCCACGGAACTATCGCTGCAAGGCAAGGAGTGAGCCTGTGCCAACATCCACGTGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 72 bp | GCTACAGAAGTTCTTTTATTCGCAGCGTTCCCTTTCTaGCCCACACGATCCACTGTGAACTCCGTGGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ATEVLLFAAFPF*PTRSTVNSVAS Trigger: AGAGGCCACGGAGTTCACAGTGGATCGTGTGGGCCAGAAAGGGAACGCTGCGAATAAAAGAACTTCTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTAGAACTCAGGCAATCTGGCTTGGCAGCAAGTGCCCTTTACCTGCTGAGCCTTCAGGCAGAAAACTaGGAGTTAATACCAGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GLELRQSGLAASALYLLSLQAEN*ELIPEL Trigger: CAACTCTGGTATTAACTCCAAGTTTTCTGCCTGAAG...GCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCAGATTGCCTGAGTTCTAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATTCTCAGGCAATCTGGCTaGGCAGCAAGTGCCCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SASILFLLLCFFCLVPCILRQSG*AASALY Trigger: GTAAAGGGCACTTGCTGCCAAGCCAGATTGCCTGAG...AATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR GCA 72 bp | CTTGGCAGCAAGTGCCCTTTACCTGCTGAGCCTTCCTaGTGGCCCCACTCACTGTTTTCTTACAGTCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGSKCPLPAEPS*WPHSLFSYSHK Trigger: TTTATGACTGTAAGAAAACAGTGAGTGGGGCCAGCAGGAAGGCTCAGCAGGTAAAGGGCACTTGCTGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGTCATGCAAACTGTATATaGCCCAGTACAGGGGAATGCCAGGGCCAAAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WKERPIGHANCI*PSTGECQGQKV Trigger: CACTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATACAGTTTGCATGACCAATGGGCCTCTCTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 72 bp | CCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTaGTGCCATGTATTCCCTGACACAATGGACTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: PASCSCCCAFSA*CHVFPDTMDSI Trigger: GATGGAGTCCATTGTGTCAGGGAATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR GCA 72 bp | CAGTGCAGGGAGAGTTACAGGCCCCCAAAGCCATGCTaGGATTTTCATGTATGTGTTGCTGATTTGACATCA | + |
|
Preference number: 3 (lower is better) Translates to: QCRESYRPPKPC*DFHVCVADLTS Trigger: TGATGTCAAATCAGCAACACATACATGAAAATCGCAGCATGGCTTTGGGGGCCTGTAACTCTCCCTGCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATTGTGGGTTCCTCTTTGTaGACACTGGCAATGCTTATC | + |
|
Preference number: 3 (lower is better) Translates to: SASILFLLLCFFCLVPCIVGSSL*TLAMLI Trigger: GATAAGCATTGCCAGTGTCAACAAAGAGGAACCCAC...AATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 72 bp | AGCCATGCTGCGATTTTCATGTATGTGTTGCTGATTTaGCATCAGGGGCTGATGTGTGTAGGCAAGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SHAAIFMYVLLI*HQGLMCVGKLS Trigger: AGAGAGCTTGCCTACACACATCAGCCCCTGATGTCAAATCAGCAACACATACATGAAAATCGCAGCATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 72 bp | GAGTTTCTCACTTGGTCAGAAGTTCATGACTTCAGTTaGACTGATGGCCAAGGAGCTCTTGGGATGTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: EFLTWSEVHDFS*TDGQGALGMYL Trigger: CAAGTACATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCAAGTGAGAAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCTATGGGGGCCCTTCTTGTCCAAACTACCATATGGAGTTTCTCACTTGGTCCAAAATTTGACCTCTaGAACTCTATTTCCAGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: KPMGALLVQTTIWSFSLGPKFDL*NSISSV Trigger: CACGCTGGAAATAGAGTTCAAGAGGTCAAATTTTGG...ACCAAGTGAGAAACTCCATATGGTAGTTTGGACAAGAAGGGCCCCCATAGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 72 bp | AAGCCTATGGGGGCCCTTCTTGTCCAAACTACCATATaGAGTTTCTCACTTGGTCAGAAGTTCATGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KPMGALLVQTTI*SFSLGQKFMTS Trigger: TGAAGTCATGAACTTCTGACCAAGTGAGAAACTCCATATGGTAGTTTGGACAAGAAGGGCCCCCATAGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 72 bp | TCCTATGCCAGTGAGTTAACTGTAGTGTCAGCGCGGTaGCAACTTTTCTGGGCTTCTCTGCTAAAATACATA | + |
|
Preference number: 3 (lower is better) Translates to: SYASELTVVSAR*QLFWASLLKYI Trigger: TATGTATTTTAGCAGAGAAGCCCAGAAAAGTTGTCACCGCGCTGACACTACAGTTAACTCACTGGCATAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 72 bp | GCCATGTATTCCCTGACACAATGGACTCCATCCCTCTaGAACCATAAACAAAATAAATCCTTTCGCCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: AMYSLTQWTPSL*NHKQNKSFRLY Trigger: GTACAGGCGAAAGGATTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CCA 72 bp | GGGGCACAGGTCACTGGATGTCACCTAAACTGCCTATaGCAGCTTAATTCAAAATTATATAAGGGTAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: GAQVTGCHLNCL*QLNSKLYKGNR Trigger: CCTATTACCCTTATATAATTTTGAATTAAGCTGCCATAGGCAGTTTAGGTGACATCCAGTGACCTGTGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 72 bp | TACCTACATATGCAGTGGACCCAAAATTTGACCTCTTaGACTCTATTTCCAGCGTGTAATAATTTCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: YLHMQWTQNLTS*TLFPACNNFCG Trigger: GCCACAGAAATTATTACACGCTGGAAATAGAGTTCAAGAGGTCAAATTTTGGGTCCACTGCATATGTAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 72 bp | ATATCATGTCTCCTGGGCTACATCATCTCTGAATACTaGTCAGCTAATCTAACCTGCCTTTGTCTAAATATT | + |
|
Preference number: 3 (lower is better) Translates to: ISCLLGYIISEY*SANLTCLCLNI Trigger: AATATTTAGACAAAGGCAGGTTAGATTAGCTGATCAGTATTCAGAGATGATGTAGCCCAGGAGACATGATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR TCA 72 bp | TTCACAATTACCTACATATGCAGTGGACCCAAAATTTaGCCTCTTGAACTCTATTTCCAGCGTGTAATAATT | + |
|
Preference number: 3 (lower is better) Translates to: FTITYICSGPKI*PLELYFQRVII Trigger: AATTATTACACGCTGGAAATAGAGTTCAAGAGGTCAAATTTTGGGTCCACTGCATATGTAGGTAATTGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTAGAACTCAGGCAATCTGGCTTGGCAGCAAGTGCCCTTTACCTGCTGAGCTGCACAGACCCACTCTaGATGGACAGGGGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLELRQSGLAASALYLLSCTDPL*MDRGSG Trigger: TCCTGAGCCCCTGTCCATTCAGAGTGGGTCTGTGCA...GCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCAGATTGCCTGAGTTCTAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTAGAACTCAGGCAATCTGGCTTGGCAGCAAGTGCCCTTTACCTGCTGAGCCCCCCGCTGTTTCACTaGAGCCAAACACGTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLELRQSGLAASALYLLSPPLFH*SQTRRR Trigger: TCTTCGACGTGTTTGGCTTCAGTGAAACAGCGGGGG...GCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCAGATTGCCTGAGTTCTAGCCC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCACAGGGTTGTTGCACATaGAGCACTGCCATGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PTRSTVNSVASLSHELQAQGCCT*STAMPP Trigger: CGGGGGCATGGCAGTGCTTCATGTGCAACAACCCTG...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCAACCTGGATCCACGGCTaGGGTGCTTGGCTGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTRSTVNSVASLSHELQATWIHG*GAWLTR Trigger: CCTTGTCAGCCAAGCACCCCAGCCGTGGATCCAGGT...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 72 bp | CCGAGAGGCTCACTGTTGTTCAGGGTCACGTGGATGTaGGCACAGGCTCACTCCTTGCCTTGCAGCGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRGSLLFRVTWM*AQAHSLPCSDS Trigger: ACTATCGCTGCAAGGCAAGGAGTGAGCCTGTGCCAACATCCACGTGACCCTGAACAACAGTGAGCCTCTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCATTGCCATCTGTCCAGTaGGGTAGGGGAATTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTRSTVNSVASLSHELQALPSVQ*GRGIAL Trigger: CAGAGCAATTCCCCTACCTCACTGGACAGATGGCAA...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCAGCCACGTTGATGCACTaGAGCCATTCCTCTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPATLMH*SHSSAF Trigger: GAACGCAGAGGAATGGCTGCAGTGCATCAACGTGGC...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCATCTCCGGCCAGAGCCTaGGGTATTGCTCTCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPSPARA*GIALSI Trigger: AATGCTGAGAGCAATACCCCAGGCTCTGGCCGGAGA...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 72 bp | AAGTCAGTTATGGGGCTAGAACTCAGGCAATCTGGCTaGGCAGCAAGTGCCCTTTACCTGCTGAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVMGLELRQSG*AASALYLLSLP Trigger: AGGAAGGCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCAGATTGCCTGAGTTCTAGCCCCATAACTGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 72 bp | TTCATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTaGGGATGTACTTGCCTCCAACTCCCAGTGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FMTSVGLMAKEL*GCTCLQLPVQG Trigger: TCCCTGCACTGGGAGTTGGAGGCAAGTACATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 72 bp | AACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTaGAAACGCTATGGGCTTTTGAACCCTCAAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NHVAEAGGRVAN*KRYGLLNPQSP Trigger: TGGGCTTTGAGGGTTCAAAAGCCCATAGCGTTTCAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGCTGAGTGGGTCTATTTaGGAAAGAGAGATGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CIMRHNHVAEAGGRVANLLSGSI*EREMLA Trigger: CGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAG...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCATCCTTGCTGCCTCTGTaGAGGAATTTCACTGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: PTRSTVNSVASLSHELQASLLPL*RNFTAM Trigger: CATCGCAGTGAAATTCCTCCACAGAGGCAGCAAGGA...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGCCAGGGACAGGTAGTTaGACATGTTCCTACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIMRHNHVAEAGGRVANLPGTGS*TCSYTA Trigger: AGCTGTGTAGGAACATGTCCAACTACCTGTCCCTGG...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | ACATTGTTACTGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTATTATCCCTTCAGTGTaGTCAGCCAGCAGATCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLLHSFCGGRTPSYPGPIIPSV*SASRSA Trigger: GGCGGATCTGCTGGCTGACCACACTGAAGGGATAAT...AGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCAGTAACAATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGAAGTTCATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTTGGGATGGAGAGAAACATGACCTaGATCCACGGCTGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSEVHDFSWTDGQGALGMERNMT*IHGWGA Trigger: AGCACCCCAGCCGTGGATCCAGGTCATGTTTCTCTC...CATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCATCTGCTGTGGAAAGGTaGACTCTGTCATGGCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PTRSTVNSVASLSHELQASAVER*TLSWRL Trigger: AAGTCGCCATGACAGAGTCCACCTTTCCACAGCAGA...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | ACATTGTTACTGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTTCTGTCTGCTCCAATTaGGACATCAAGGCCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLLHSFCGGRTPSYPGPSVCSN*DIKARS Trigger: ACTCCTGGCCTTGATGTCTCAATTGGAGCAGACAGA...AGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCAGTAACAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGACCAGGGCTCTGGCATaGTTTTCAATGGATTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CIMRHNHVAEAGGRVANLTRALA*FSMDSV Trigger: GACAGAATCCATTGAAAAGCATGCCAGAGCCCTGGT...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTAGAACTCAGGCAATCTGGCTTGGCAGCAAGTGCCCTTTACCTGCTGAGCCAGAGCCTGGGGTATTaGTCTCAGCATTTATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLELRQSGLAASALYLLSQSLGY*SQHLFC Trigger: ACAAAATAAATGCTGAGAGCAATACCCCAGGCTCTG...GCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCAGATTGCCTGAGTTCTAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCAGGAATTTCACTGCGATaGGGACAGCTAAGACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PTRSTVNSVASLSHELQAGISLR*GQLRPS Trigger: TGATGGTCTTAGCTGTCCCCATCGCAGTGAAATTCC...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCATCCATATTAGCCAGCTaGCTCACCAGGTATCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPSILAS*LTRYRR Trigger: CCTACGATACCTGGTGAGCCAGCTGGCTAATATGGA...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTAGAACTCAGGCAATCTGGCTTGGCAGCAAGTGCCCTTTACCTGCTGAGCACTTGGAGTTTTTCATaGTCTTCACTTTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLELRQSGLAASALYLLSTWSFS*SSLSGS Trigger: GGAGCCTGAAAGTGAAGACCATGAAAAACTCCAAGT...GCTCAGCAGGTAAAGGGCACTTGCTGCCAAGCCAGATTGCCTGAGTTCTAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGGGAATTTCTCAGTGGTaGTCCATGAGTGTCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CIMRHNHVAEAGGRVANLGISQW*SMSVCL Trigger: AAGACAGACACTCATGGATCACCACTGAGAAATTCC...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATCAAGGCCAGGAGTTCTaGCAGGTGTCTGTTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYQGQEF*QVSVDW Trigger: CCAATCAACAGACACCTGGCAGAACTCCTGGCCTTG...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCACACATCTTTTCTCTTTaGTGCTACGTGCAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTRSTVNSVASLSHELQAHIFSL*CYVQKP Trigger: AGGCTTCTGCACGTAGCAGCAAAGAGAAAAGATGTG...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCAGTAGGGGAATTGCTCTaGAATCTCTTTCAGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPVGELL*NLFQHR Trigger: CCGATGCTGAAAGAGATTGCAGAGCAATTCCCCTAC...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | ACATTGTTACTGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTTGCTACTGTCAGCCTTaGTGTTTTCCAGTTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLLHSFCGGRTPSYPGPCYCQP*CFPVVW Trigger: CCAGACAACTGGAAAACAGCAAGGCTGACAGTAGCA...AGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCAGTAACAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATTCTGCAGCCATTCCTCTaGGTTCTTCTCATCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SASILFLLLCFFCLVPCILQPFL*VLLILG Trigger: GCCAAGGATGAGAAGAACGCAGAGGAATGGCTGCAG...AATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTTTTTAAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGCAGATCCGCCTTGGTaGTGGCAGCCAGGGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MVFKLLSLAAYVSKDGLVADPPW*WQPGTG Trigger: ACCTGTCCCTGGCTGCCATCACCAAGGCGGATCTGC...GACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTTAAAAACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCACAGGTGTCTGTTGATTaGTTGGGGCTGCTTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPQVSVD*LGLLFI Trigger: TATGAAAAGCAGCCCCAACCAATCAACAGACACCTG...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCAAGAAGCCTTAGTAGATaGTACTGTTCTGTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPRSLSR*YCSVCS Trigger: GGAGCAGACAGAACAGTACCATCTACTAAGGCTTCT...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATATCGTAGGCAGCTCCTaGCTCTCTCTTCATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYIVGSS*LSLHPH Trigger: ATGTGGATGAAGAGAGAGCCAGGAGCTGCCTACGAT...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCATCCAGCAGGAGAATATaGTGGAATGGATGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPSSRRI*WNGCSI Trigger: TATGGAGCATCCATTCCACCATATTCTCCTGCTGGA...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGAAGTTCATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTTGGGATGTCTTCAATGGTGCACTaGTCTGGGATTGGGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSEVHDFSWTDGQGALGMSSMVH*SGIGTF Trigger: AAAGGTCCCAATCCCAGACCAGTGCACCATTGAAGA...CATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCTATGGGGGCCCTTCTTGTCCAAACTACCATATGGAGTTTCTCACTTGGTGGAAACAGGCTCTGTTaGGAGAGAAACATGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPMGALLVQTTIWSFSLGGNRLC*ERNMTW Trigger: CCAGGTCATGTTTCTCTCCCAACAGAGCCTGTTTCC...ACCAAGTGAGAAACTCCATATGGTAGTTTGGACAAGAAGGGCCCCCATAGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 72 bp | GTGGCCTCTCTTTCTCATGAACTTCAGGCAGAAAACTaGGAGTTAATACCAGAGTTGCGAGGGCGTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VASLSHELQAEN*ELIPELRGREV Trigger: AACCTCACGCCCTCGCAACTCTGGTATTAACTCCAAGTTTTCTGCCTGAAGTTCATGAGAAAGAGAGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGATAAATATATTTCCATCATGGCAGAGAGCATGGCAGTAGGCAGGCATCTGCCAGGTGTCTGTTaGTTGGTTGGGGCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEDKYISIMAESMAVGRHLPGVC*LVGAAF Trigger: AAAAGCAGCCCCAACCAATCAACAGACACCTGGCAG...ATGCCTGCCTACTGCCATGCTCTCTGCCATGATGGAAATATATTTATCCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATCTCTTTGCTGCTACGTaGAGAAGCCTTAGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYLFAAT*RSLSRW Trigger: CCATCTACTAAGGCTTCTGCACGTAGCAGCAAAGAG...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATAGCACCAAAGATCCTTaGCATCTGTCCAGTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYSTKDP*HLSSEV Trigger: TACCTCACTGGACAGATGGCAAGGATCTTTGGTGCT...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATAGAGGCTGGCCATCTTaGTTTACAACAGTTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYRGWPS*FTTVAF Trigger: AAAGGCAACTGTTGTAAATCAAGATGGCCAGCCTCT...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCACTAATTACTTTAATCTaGTCCAAAGCTTCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTRSTVNSVASLSHELQALITLI*SKASVR Trigger: CCTGACAGAAGCTTTGGAGCAGATTAAAGTAATTAG...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGAAGTTCATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTTGGGATGATCAGAGGCGATTTTTaGATGTGGAGTATCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: WSEVHDFSWTDGQGALGMIRGDF*MWSIFV Trigger: GACGAAGATACTCCACATGCAAAAATCGCCTCTGAT...CATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGATAAATATATTTCCATCATGGCAGAGAGCATGGCAGTAGGCAGGCATTCCTACACAGCTCCTTaGTGCCTCTGTGGAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SEDKYISIMAESMAVGRHSYTAP*CLCGGI Trigger: AATTCCTCCACAGAGGCAGCAAGGAGCTGTGTAGGA...ATGCCTGCCTACTGCCATGCTCTCTGCCATGATGGAAATATATTTATCCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | TCACCACATGGTTTGCATTTAAAGCAGGATACATTGTTACTGCATAGTTTCTGTAAGATGTCCCTGCTGTaGGGGCCCAGGATGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPHGLHLKQDTLLLHSFCKMSLL*GPRMEE Trigger: CTCCTCCATCCTGGGCCCGCACAGCAGGGACATCTT...ACAGAAACTATGCAGTAACAATGTATCCTGCTTTAAATGCAAACCATGTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CATAAATCACATAGCTACAGAAGTTCTTTTATTCGCAGCGTTCCCTTTCTGGCCCAGACCCACTCTGAATaGACAGGGGCTCAGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HKSHSYRSSFIRSVPFLAQTHSE*TGAQET Trigger: TGTTTCCTGAGCCCCTGTCCATTCAGAGTGGGTCTG...GGCCAGAAAGGGAACGCTGCGAATAAAAGAACTTCTGTAGCTATGTGATTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 72 bp | AAGCCATGCTGCGATTTTCATGTATGTGTTGCTGATTaGACATCAGGGGCTGATGTGTGTAGGCAAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KPCCDFHVCVAD*TSGADVCRQAL Trigger: GAGAGCTTGCCTACACACATCAGCCCCTGATGTCAAATCAGCAACACATACATGAAAATCGCAGCATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGAAGTTCATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTTGGGATGATTTCAACCACCGCCTaGTCATTGTTATTAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSEVHDFSWTDGQGALGMISTTA*SLLLVW Trigger: CCAAACTAATAACAATGACCAGGCGGTGGTTGAAAT...CATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCAAGCATGGCATTTCCTTaGAGTATGCTCTTTATTATC | + |
|
Preference number: 4 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPSMAFP*SMLFII Trigger: GATAATAAAGAGCATACTCCAAGGAAATGCCATGCT...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGAAGTTCATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTTGGGATGAGCAGGAGAATATGGTaGAATGGATGCTCCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: WSEVHDFSWTDGQGALGMSRRIW*NGCSIL Trigger: TAATATGGAGCATCCATTCCACCATATTCTCCTGCT...CATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGGCTTGGATTTTAACTTaGAGTTTTTCATGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CIMRHNHVAEAGGRVANLAWILT*SFSWSS Trigger: TGAAGACCATGAAAAACTCCAAGTTAAAATCCAAGC...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 72 bp | GCCACCACTGCCTGGCTCCTAATGGTTTTTAAGCTCTaGTCTCTAGCTGCATATGTATCAAAAGATGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ATTAWLLMVFKL*SLAAYVSKDGL Trigger: TAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTTAAAAACCATTAGGAGCCAGGCAGTGGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATGTAAGATGCAACTCATaGTATCAGAGGCGATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYVRCNS*YQRRFL Trigger: CAAAAATCGCCTCTGATATCATGAGTTGCATCTTAC...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGATAAATATATTTCCATCATGGCAGAGAGCATGGCAGTAGGCAGGCATATATGGTGGAATGGATaGTCCATATTAGCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SEDKYISIMAESMAVGRHIWWNG*SILASW Trigger: CCAGCTGGCTAATATGGAGCATCCATTCCACCATAT...ATGCCTGCCTACTGCCATGCTCTCTGCCATGATGGAAATATATTTATCCTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAACATGAAGCACTGCCATaGCCCCGCTGTTTCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKHEALP*PRCFTE Trigger: TTCAGTGAAACAGCGGGGGCATGGCAGTGCTTCATG...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAATTGCACATGAAGCACTaGCATGCCCCCGCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKLHMKH*HAPAVS Trigger: TGAAACAGCGGGGGCATGGCAGTGCTTCATGTGCAA...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAAGCTTGGCAATGTTGGTaGAGCTGTTGCTCATTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKAWQCW*SCCSFG Trigger: TCCGAATGAGCAACAGCTTCACCAACATTGCCAAGC...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | TCACCACATGGTTTGCATTTAAAGCAGGATACATTGTTACTGCATAGTTTCTGTGCCCCACCAGGGCTCTaGCATGCTTTTCAATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SPHGLHLKQDTLLLHSFCAPPGL*HAFQWI Trigger: AATCCATTGAAAAGCATGCCAGAGCCCTGGTGGGGC...ACAGAAACTATGCAGTAACAATGTATCCTGCTTTAAATGCAAACCATGTGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTTTTTAAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCATCTTCGTCTTTCCCTaGAGGTCTCAGGTTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MVFKLLSLAAYVSKDGLVIFVFP*RSQVVF Trigger: GAACACAACCTGAGACCTGCAGGGAAAGACGAAGAT...GACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTTAAAAACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGATAAATATATTTCCATCATGGCAGAGAGCATGGCAGTAGGCAGGCATTGTCTGTTGATTGGTTaGGGCTGCTTTTCATATACA | + |
|
Preference number: 4 (lower is better) Translates to: SEDKYISIMAESMAVGRHCLLIG*GCFSYT Trigger: TGTATATGAAAAGCAGCCCCAACCAATCAACAGACA...ATGCCTGCCTACTGCCATGCTCTCTGCCATGATGGAAATATATTTATCCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTTTTTAAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCCAGATCCTTCTGCTGTaGAAAGGTGGACTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MVFKLLSLAAYVSKDGLVQILLL*KGGLCH Trigger: ATGACAGAGTCCACCTTTCCACAGCAGAAGGATCTG...GACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTTAAAAACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | TCACCACATGGTTTGCATTTAAAGCAGGATACATTGTTACTGCATAGTTTCTGTCAGGCTCCATGGAATTaGGTTCTCTCAGTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPHGLHLKQDTLLLHSFCQAPWN*VLSVSQ Trigger: CTGAGAAACTGAGAGAACTCAATTCCATGGAGCCTG...ACAGAAACTATGCAGTAACAATGTATCCTGCTTTAAATGCAAACCATGTGGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAAGGCGATTTTTGCATGTaGAGTATCTTCGTCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKGDFCM*SIFVFP Trigger: GGGAAAGACGAAGATACTCCACATGCAAAAATCGCC...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAAAAGCCTTCACTTTGCTaGGGTTTTCCCTTAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKKPSLC*GFPLNA Trigger: TGCATTTAAGGGAAAACCTCAGCAAAGTGAAGGCTT...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | CATAAATCACATAGCTACAGAAGTTCTTTTATTCGCAGCGTTCCCTTTCTGGCCCATTTCCTTGGAGTATaGTCTTTATTATCCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKSHSYRSSFIRSVPFLAHFLGV*SLLSLQ Trigger: CTGAAGGGATAATAAAGAGCATACTCCAAGGAAATG...GGCCAGAAAGGGAACGCTGCGAATAAAAGAACTTCTGTAGCTATGTGATTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| 3UTR CAA 72 bp | ATCCTTTCGCCTGTACGCTATTTTCATCAGGGTATTTaGCCACGGAACAGAAAGCTAACTAATATACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSPVRYFHQGI*PRNRKLTNILK Trigger: CTTCAGTATATTAGTTAGCTTTCTGTTCCGTGGCAAAATACCCTGATGAAAATAGCGTACAGGCGAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAAAAAGGAACACATTTCTaGACCACCTCCACATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKKGTHF*TTSTSF Trigger: AAAAGATGTGGAGGTGGTTCAGAAATGTGTTCCTTT...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAATTAGATTTCCCCTTTTaGAACAGAAGTTGGTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKLDFPF*NRSWFP Trigger: CGGAAACCAACTTCTGTTTCAAAAGGGGAAATCTAA...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAATCTCATCCTTGGCTTTaGAAACATAGGTCTTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKSHPWL*KHRSYY Trigger: ATAGTAAGACCTATGTTTTCAAAGCCAAGGATGAGA...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR GCA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAATTGATTTACAACAGTTaGCTTTTCAGGGTTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKLIYNS*LFRVVA Trigger: TGCAACAACCCTGAAAAGGCAACTGTTGTAAATCAA...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGGGCTTTCCCTCTCCTTaGCCTGGGCCAGCGCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: CIMRHNHVAEAGGRVANLGFPSP*PGPAPR Trigger: ACGTGGCGCTGGCCCAGGCAAAGGAGAGGGAAAGCC...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 90 bp | GACAGGGGCTCAGGAAACAGGCTCTGTTGGGAGAGAAACATGACCTaGATCCACGGCTGGGGTGCTTGGCTGACAAGGATGAAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: DRGSGNRLCWERNMT*IHGWGAWLTRMKLD Trigger: GTCCAGCTTCATCCTTGTCAGCCAAGCACCCCAGCCGTGGATCCAGGTCATGTTTCTCTCCCAACAGAGCCTGTTTCCTGAGCCCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 90 bp | CAAAGCTGTGCGCTCCCGTGTCCTGCGTTTTCTCCCATAGGGCTTTaGGGAACTGCACAGACCCACTCTGAATGGACAGGGGCTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QSCALPCPAFSPIGL*GTAQTHSEWTGAQE Trigger: TTCCTGAGCCCCTGTCCATTCAGAGTGGGTCTGTGCAGTTCCTCAAAGCCCTATGGGAGAAAACGCAGGACACGGGAGCGCACAGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | GTGGACTCTGTCATGGCGACTTCAAAGCTGTGCGCTCCCGTGTCCTaGGTTTTCTCCCATAGGGCTTTGAGGAACTGCACAGACCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: VDSVMATSKLCAPVS*VFSHRALRNCTDPL Trigger: GAGTGGGTCTGTGCAGTTCCTCAAAGCCCTATGGGAGAAAACGCAGGACACGGGAGCGCACAGCTTTGAAGTCGCCATGACAGAGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 90 bp | GAAGCTGCTCCAGATCCTTCTGCTGTGGAAAGGTGGACTCTGTCATaGCGACTTCAAAGCTGTGCGCTCCCGTGTCCTGCGTTTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EAAPDPSAVERWTLS*RLQSCALPCPAFSP Trigger: GGGAGAAAACGCAGGACACGGGAGCGCACAGCTTTGAAGTCGCCATGACAGAGTCCACCTTTCCACAGCAGAAGGATCTGGAGCAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | TGGCAGCCAGGGACAGGTAGTTGGACATGTTCCTACACAGCTCCTTaGTGCCTCTGTGGAGGAATTTCACTGCGATGGGGACAGCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WQPGTGSWTCSYTAP*CLCGGISLRWGQLR Trigger: TCTTAGCTGTCCCCATCGCAGTGAAATTCCTCCACAGAGGCAGCAAGGAGCTGTGTAGGAACATGTCCAACTACCTGTCCCTGGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | TTCTGCTGTGGAAAGGTGGACTCTGTCATGGCGACTTCAAAGCTGTaGGCTCCCGTGTCCTGCGTTTTCTCCCATAGGGCTTTGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FCCGKVDSVMATSKL*APVSCVFSHRALRN Trigger: GTTCCTCAAAGCCCTATGGGAGAAAACGCAGGACACGGGAGCGCACAGCTTTGAAGTCGCCATGACAGAGTCCACCTTTCCACAGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCAGAAGTTCATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTTGGGATGCCACGGCTGGGGTGCTaGGCTGACAAGGATGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WSEVHDFSWTDGQGALGMPRLGC*ADKDEA Trigger: AGCTTCATCCTTGTCAGCCAAGCACCCCAGCCGTGG...CATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATTGGGCCAGCGCCACGTaGATGCACTGCAGCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYWASAT*MHCSHS Trigger: GGAATGGCTGCAGTGCATCAACGTGGCGCTGGCCCA...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 90 bp | TGCGTTTTCTCCCATAGGGCTTTGAGGAACTGCACAGACCCACTCTaGATGGACAGGGGCTCAGGAAACAGGCTCTGTTGGGAGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CVFSHRALRNCTDPL*MDRGSGNRLCWERN Trigger: GTTTCTCTCCCAACAGAGCCTGTTTCCTGAGCCCCTGTCCATTCAGAGTGGGTCTGTGCAGTTCCTCAAAGCCCTATGGGAGAAAACGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 90 bp | TCCAGCAGGAGAATATGGTGGAATGGATGCTCCATATTAGCCAGCTaGCTCACCAGGTATCGTAGGCAGCTCCTGGCTCTCTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRRIWWNGCSILAS*LTRYRRQLLALSSS Trigger: GGATGAAGAGAGAGCCAGGAGCTGCCTACGATACCTGGTGAGCCAGCTGGCTAATATGGAGCATCCATTCCACCATATTCTCCTGCTGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 90 bp | TCTTTATTATCCCTTCAGTGTGGTCAGCCAGCAGATCCGCCTTGGTaGTGGCAGCCAGGGACAGGTAGTTGGACATGTTCCTACACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLSLQCGQPADPPW*WQPGTGSWTCSYTA Trigger: AGCTGTGTAGGAACATGTCCAACTACCTGTCCCTGGCTGCCATCACCAAGGCGGATCTGCTGGCTGACCACACTGAAGGGATAATAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | TACAACAGTTGCCTTTTCAGGGTTGTTGCACATGAAGCACTGCCATaGCCCCGCTGTTTCACTGAAGCCAAACACGTCGAAGAACCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YNSCLFRVVAHEALP*PRCFTEAKHVEEPH Trigger: GTGCGGTTCTTCGACGTGTTTGGCTTCAGTGAAACAGCGGGGGCATGGCAGTGCTTCATGTGCAACAACCCTGAAAAGGCAACTGTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 90 bp | TCCTACACAGCTCCTTGCTGCCTCTGTGGAGGAATTTCACTGCGATaGGGACAGCTAAGACCATCACAGGGGTCCGGTTGTAATTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SYTAPCCLCGGISLR*GQLRPSQGSGCNSV Trigger: TACAGAATTACAACCGGACCCCTGTGATGGTCTTAGCTGTCCCCATCGCAGTGAAATTCCTCCACAGAGGCAGCAAGGAGCTGTGTAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCATCTGCCAGGTGTCTGTaGATTGGTTGGGGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPSARCL*IGWGCF Trigger: AAAGCAGCCCCAACCAATCAACAGACACCTGGCAGA...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCATGTCTGGAAAGGAGCTaGGCAATGTTGGTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTRSTVNSVASLSHELQACLERS*AMLVKL Trigger: CAGCTTCACCAACATTGCCAAGCTCCTTTCCAGACA...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCAGTTGCCTTTTCAGGGTaGTTGCACATGAAGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PTRSTVNSVASLSHELQAVAFSG*LHMKHC Trigger: GCAGTGCTTCATGTGCAACAACCCTGAAAAGGCAAC...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCATTCACGCTCTGTACCTaGCTGAGTTCTATCGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PTRSTVNSVASLSHELQAFTLCT*LSSIGE Trigger: TTCCCCGATAGAACTCAGCAAGGTACAGAGCGTGAA...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 90 bp | CATCCACATGACCAACAGCACCAAAGATCCTTGCCATCTGTCCAGTaGGGTAGGGGAATTGCTCTGCAATCTCTTTCAGCATCGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HPHDQQHQRSLPSVQ*GRGIALQSLSASGG Trigger: TCCTCCCGATGCTGAAAGAGATTGCAGAGCAATTCCCCTACCTCACTGGACAGATGGCAAGGATCTTTGGTGCTGTTGGTCATGTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | ACCAAAGATCCTTGCCATCTGTCCAGTGAGGTAGGGGAATTGCTCTaGAATCTCTTTCAGCATCGGGAGGAAACTGTTCAAGGCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TKDPCHLSSEVGELL*NLFQHREETVQGQW Trigger: CCACTGGCCTTGAACAGTTTCCTCCCGATGCTGAAAGAGATTGCAGAGCAATTCCCCTACCTCACTGGACAGATGGCAAGGATCTTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | GTCTTAAAGGGCAACTTGCCAATCCCGTGGCTGAGTGGGTCTATTTaGGAAAGAGAGATGCTGGCGTGCATTCCTGCCTTTTCTTCGACT | + |
|
Preference number: 5 (lower is better) Translates to: VLKGNLPIPWLSGSI*EREMLACIPAFSST Trigger: AGTCGAAGAAAAGGCAGGAATGCACGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAGCCACGGGATTGGCAAGTTGCCCTTTAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 90 bp | ATGAGTGTCTGTCTTAAAGGGCAACTTGCCAATCCCGTGGCTGAGTaGGTCTATTTGCGAAAGAGAGATGCTGGCGTGCATTCCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MSVCLKGQLANPVAE*VYLRKRDAGVHSCL Trigger: AAGGCAGGAATGCACGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAGCCACGGGATTGGCAAGTTGCCCTTTAAGACAGACACTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATTCCTGCAGGTCTCAGGTaGTGTTCCAAGCAGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: SASILFLLLCFFCLVPCIPAGLR*CSKQES Trigger: GGATTCCTGCTTGGAACACAACCTGAGACCTGCAGG...AATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCATTCTGTCTGCTCCAATaGAGACATCAAGGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPFCLLQ*RHQGQE Trigger: CTCCTGGCCTTGATGTCTCAATTGGAGCAGACAGAA...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | CGCCATGGTGGGTTCCTCTTTGTTGACACTGGCAATGCTTATCTTGCATGGCCAGCCTTTTCAGGGTTGTaGCACATGAAGCACTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RHGGFLFVDTGNAYLAWPAFSGL*HMKHCH Trigger: ATGGCAGTGCTTCATGTGCAACAACCCTGAAAAGGC...TGGCCATGCAAGATAAGCATTGCCAGTGTCAACAAAGAGGAACCCACCATGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGTGCGTTTTCCACCTCTaGATGAACTTCCACCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: CIMRHNHVAEAGGRVANLCVFHL*MNFHLT Trigger: AGTGAGGTGGAAGTTCATCAAGAGGTGGAAAACGCA...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 90 bp | GCTCCAATTGAGACATCAAGGCCAGGAGTTCTGCCAGGTGTCTGTTaGTTGGTTGGGGCTGCTTTTCATATACAGCAGGTAGCACCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: APIETSRPGVLPGVC*LVGAAFHIQQVAPL Trigger: TAAGGGTGCTACCTGCTGTATATGAAAAGCAGCCCCAACCAATCAACAGACACCTGGCAGAACTCCTGGCCTTGATGTCTCAATTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | CCTGGCTCTCTCTTCATCCACATGACCAACAGCACCAAAGATCCTTaGCATCTGTCCAGTGAGGTAGGGGAATTGCTCTGCAATCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSLFIHMTNSTKDP*HLSSEVGELLCNLF Trigger: AAAGAGATTGCAGAGCAATTCCCCTACCTCACTGGACAGATGGCAAGGATCTTTGGTGCTGTTGGTCATGTGGATGAAGAGAGAGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | ATCCCGTGGCTGAGTGGGTCTATTTGCGAAAGAGAGATGCTGGCGTaGATTCCTGCCTTTTCTTCGACTTCGTTATCTTCCACACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: IPWLSGSICEREMLA*IPAFSSTSLSSTLT Trigger: TGTGAGTGTGGAAGATAACGAAGTCGAAGAAAAGGCAGGAATGCACGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAGCCACGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATGCTGAGTGGGTCTATTaGCGAAAGAGAGATGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYAEWVY*RKRDAG Trigger: GCCAGCATCTCTCTTTCGCAAATAGACCCACTCAGC...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCAGAAGTTCATGACTTCAGTTGGACTGATGGCCAAGGAGCTCTTGGGATGAGGAAACAGGCTCTGTaGGGAGAGAAACATGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSEVHDFSWTDGQGALGMRKQAL*GEKHDL Trigger: CAGGTCATGTTTCTCTCCCAACAGAGCCTGTTTCCT...CATCCCAAGAGCTCCTTGGCCATCAGTCCAACTGAAGTCATGAACTTCTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | ATACAGCAGGTAGCACCCTTAACAGCATGGCATTTCCTTGGAGTATaGTCTTTATTATCCCTTCAGTGTGGTCAGCCAGCAGATCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IQQVAPLTAWHFLGV*SLLSLQCGQPADPP Trigger: AGGCGGATCTGCTGGCTGACCACACTGAAGGGATAATAAAGAGCATACTCCAAGGAAATGCCATGCTGTTAAGGGTGCTACCTGCTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | GTACTGTTCTGTCTGCTCCAATTGAGACATCAAGGCCAGGAGTTCTaGCAGGTGTCTGTTGATTGGTTGGGGCTGCTTTTCATATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLFCLLQLRHQGQEF*QVSVDWLGLLFIYS Trigger: GCTGTATATGAAAAGCAGCCCCAACCAATCAACAGACACCTGGCAGAACTCCTGGCCTTGATGTCTCAATTGGAGCAGACAGAACAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | GCTGAGTGGGTCTATTTGCGAAAGAGAGATGCTGGCGTGCATTCCTaGCTTTTCTTCGACTTCGTTATCTTCCACACTCACACCGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AEWVYLRKRDAGVHS*LFFDFVIFHTHTVC Trigger: ACAAACGGTGTGAGTGTGGAAGATAACGAAGTCGAAGAAAAGGCAGGAATGCACGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | ACATTGTTACTGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTGTGTCTGTTGATTGGTaGGGGCTGCTTTTCATATAC | + |
|
Preference number: 5 (lower is better) Translates to: TLLLHSFCGGRTPSYPGPVSVDW*GLLFIY Trigger: GTATATGAAAAGCAGCCCCAACCAATCAACAGACAC...AGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCAGTAACAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | TGCATCATGAGGCATAACCATGTGGCAGAGGCAGGTGGTAGGGTGGCTAACTTGCTTTTGAAACAGAAGTaGGTTTCCGGCCAGTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: CIMRHNHVAEAGGRVANLLLKQK*VSGQCK Trigger: TTTACACTGGCCGGAAACCAACTTCTGTTTCAAAAG...CAAGTTAGCCACCCTACCACCTGCCTCTGCCACATGGTTATGCCTCATGATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 90 bp | TCTGTGATACTCTTAATTTCCAGCAGGAGAATATGGTGGAATGGATaGTCCATATTAGCCAGCTGGCTCACCAGGTATCGTAGGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVILLISSRRIWWNG*SILASWLTRYRRQL Trigger: GAGCTGCCTACGATACCTGGTGAGCCAGCTGGCTAATATGGAGCATCCATTCCACCATATTCTCCTGCTGGAAATTAAGAGTATCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | ACATTGTTACTGCATAGTTTCTGTGGGGGCAGGACTCCATCTTATCCCGGCCCTTATCAGAGGCGATTTTaGCATGTGGAGTATCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TLLLHSFCGGRTPSYPGPYQRRF*HVEYLR Trigger: ACGAAGATACTCCACATGCAAAAATCGCCTCTGATA...AGGGCCGGGATAAGATGGAGTCCTGCCCCCACAGAAACTATGCAGTAACAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATATGTTGGTGAAGCTGTaGCTCATTCGGAAGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYMLVKL*LIRKMS Trigger: GGACATCTTCCGAATGAGCAACAGCTTCACCAACAT...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCAGGCTTGGATTTTAACTaGGAGTTTTTCATGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTRSTVNSVASLSHELQAGLDFN*EFFMVF Trigger: GAAGACCATGAAAAACTCCAAGTTAAAATCCAAGCC...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCTATGGGGGCCCTTCTTGTCCAAACTACCATATGGAGTTTCTCACTTGGTGAGAGGCTGGCCATCTaGATTTACAACAGTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KPMGALLVQTTIWSFSLGERLAI*IYNSCL Trigger: AAGGCAACTGTTGTAAATCAAGATGGCCAGCCTCTC...ACCAAGTGAGAAACTCCATATGGTAGTTTGGACAAGAAGGGCCCCCATAGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 90 bp | ATAATACTTGGGTGTGAAGCTGAGGAATTTCTCAGTGGTGATCCATaGGTGTCTGTCTTAAAGGGCAACTTGCCAATCCCGTGGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IILGCEAEEFLSGDP*VSVLKGNLPIPWLS Trigger: ACTCAGCCACGGGATTGGCAAGTTGCCCTTTAAGACAGACACTCATGGATCACCACTGAGAAATTCCTCAGCTTCACACCCAAGTATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 90 bp | GAGAAGGCATCTGTGATACTCTTAATTTCCAGCAGGAGAATATGGTaGAATGGATGCTCCATATTAGCCAGCTGGCTCACCAGGTATCGT | + |
|
Preference number: 5 (lower is better) Translates to: EKASVILLISSRRIW*NGCSILASWLTRYR Trigger: ACGATACCTGGTGAGCCAGCTGGCTAATATGGAGCATCCATTCCACCATATTCTCCTGCTGGAAATTAAGAGTATCACAGATGCCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGCCAGCATCTTGTTCTTGCTGCTGTGCTTTTTCTGCCTGGTGCCATGTATTCAGGCTCCATGGAATaGAGTTCTCTCAGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISQHLVLAAVLFLPGAMYSGSME*SSLSFS Trigger: TGAGAAACTGAGAGAACTCAATTCCATGGAGCCTGA...ATACATGGCACCAGGCAGAAAAAGCACAGCAGCAAGAACAAGATGCTGGCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | CCCACACGATCCACTGTGAACTCCGTGGCCTCTCTTTCTCATGAACTTCAGGCACAAGTAGAGCTTATCTaGGTATTCAATAGGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PTRSTVNSVASLSHELQAQVELI*VFNRTC Trigger: ACAAGTCCTATTGAATACCAAGATAAGCTCTACTTG...TGCCTGAAGTTCATGAGAAAGAGAGGCCACGGAGTTCACAGTGGATCGTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGATAAATATATTTCCATCATGGCAGAGAGCATGGCAGTAGGCAGGCATAGTGAGGTAGGGGAATaGCTCTGCAATCTCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SEDKYISIMAESMAVGRHSEVGE*LCNLFQ Trigger: CTGAAAGAGATTGCAGAGCAATTCCCCTACCTCACT...ATGCCTGCCTACTGCCATGCTCTCTGCCATGATGGAAATATATTTATCCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 90 bp | AGACCATCACAGGGGTCCGGTTGTAATTCTGTAAGATGCAACTCATaGTATCAGAGGCGATTTTTGCATGTGGAGTATCTTCGTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPSQGSGCNSVRCNS*YQRRFLHVEYLRLS Trigger: GGAAAGACGAAGATACTCCACATGCAAAAATCGCCTCTGATATCATGAGTTGCATCTTACAGAATTACAACCGGACCCCTGTGATGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCTATGGGGGCCCTTCTTGTCCAAACTACCATATGGAGTTTCTCACTTGGTCAGCATGGCATTTCCTaGGAGTATGCTCTTTATTAT | + |
|
Preference number: 5 (lower is better) Translates to: KPMGALLVQTTIWSFSLGQHGIS*EYALYY Trigger: ATAATAAAGAGCATACTCCAAGGAAATGCCATGCTG...ACCAAGTGAGAAACTCCATATGGTAGTTTGGACAAGAAGGGCCCCCATAGGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | TCACCACATGGTTTGCATTTAAAGCAGGATACATTGTTACTGCATAGTTTCTGTTTCCTACACAGCTCCTaGCTGCCTCTGTGGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPHGLHLKQDTLLLHSFCFLHSS*LPLWRN Trigger: ATTCCTCCACAGAGGCAGCAAGGAGCTGTGTAGGAA...ACAGAAACTATGCAGTAACAATGTATCCTGCTTTAAATGCAAACCATGTGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTTTTTAAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCAGGAGCTTGGCAATGTaGGTGAAGCTGTTGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: MVFKLLSLAAYVSKDGLVRSLAM*VKLLLI Trigger: AATGAGCAACAGCTTCACCAACATTGCCAAGCTCCT...GACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTTAAAAACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | ATGTATTCCCTGACACAATGGACTCCATCCCTCTGGAACCATAAACAAAATAAACCAGAGCCTGGGGTATaGCTCTCAGCATTTATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MYSLTQWTPSLWNHKQNKPEPGV*LSAFIL Trigger: CAAAATAAATGCTGAGAGCAATACCCCAGGCTCTGG...TTTATTTTGTTTATGGTTCCAGAGGGATGGAGTCCATTGTGTCAGGGAATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGATAAATATATTTCCATCATGGCAGAGAGCATGGCAGTAGGCAGGCATCTCTCAGCATTTATTTaGTCTTCAAAGGCTTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SEDKYISIMAESMAVGRHLSAFI*SSKAWI Trigger: AATCCAAGCCTTTGAAGACAAAATAAATGCTGAGAG...ATGCCTGCCTACTGCCATGCTCTCTGCCATGATGGAAATATATTTATCCTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 72 bp | CGGCTTTCCCTCTCCTTTGCCTGGGCCAGCGCCACGTaGATGCACTGCAGCCATTCCTCTGCGTTCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RLSLSFAWASAT*MHCSHSSAFFS Trigger: TGAGAAGAACGCAGAGGAATGGCTGCAGTGCATCAACGTGGCGCTGGCCCAGGCAAAGGAGAGGGAAAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 72 bp | CCAGATCCTTCTGCTGTGGAAAGGTGGACTCTGTCATaGCGACTTCAAAGCTGTGCGCTCCCGTGTCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PDPSAVERWTLS*RLQSCALPCPA Trigger: CGCAGGACACGGGAGCGCACAGCTTTGAAGTCGCCATGACAGAGTCCACCTTTCCACAGCAGAAGGATCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | GGAAAGGTGGACTCTGTCATGGCGACTTCAAAGCTGTaGGCTCCCGTGTCCTGCGTTTTCTCCCATAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GKVDSVMATSKL*APVSCVFSHRA Trigger: AGCCCTATGGGAGAAAACGCAGGACACGGGAGCGCACAGCTTTGAAGTCGCCATGACAGAGTCCACCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | GTCATGGCGACTTCAAAGCTGTGCGCTCCCGTGTCCTaGGTTTTCTCCCATAGGGCTTTGAGGAACTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: VMATSKLCAPVS*VFSHRALRNCT Trigger: TGTGCAGTTCCTCAAAGCCCTATGGGAGAAAACGCAGGACACGGGAGCGCACAGCTTTGAAGTCGCCATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 72 bp | CTCTGTTGGGAGAGAAACATGACCTGGATCCACGGCTaGGGTGCTTGGCTGACAAGGATGAAGCTGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LCWERNMTWIHG*GAWLTRMKLDL Trigger: CAAGTCCAGCTTCATCCTTGTCAGCCAAGCACCCCAGCCGTGGATCCAGGTCATGTTTCTCTCCCAACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 72 bp | GCTGAAGCTGCTCCAGATCCTTCTGCTGTGGAAAGGTaGACTCTGTCATGGCGACTTCAAAGCTGTGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AEAAPDPSAVER*TLSWRLQSCAL Trigger: GAGCGCACAGCTTTGAAGTCGCCATGACAGAGTCCACCTTTCCACAGCAGAAGGATCTGGAGCAGCTTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 72 bp | GGGCAACTTGCCAATCCCGTGGCTGAGTGGGTCTATTaGCGAAAGAGAGATGCTGGCGTGCATTCCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GQLANPVAEWVY*RKRDAGVHSCL Trigger: AAGGCAGGAATGCACGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAGCCACGGGATTGGCAAGTTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | GGGACAGGTAGTTGGACATGTTCCTACACAGCTCCTTaGTGCCTCTGTGGAGGAATTTCACTGCGATGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTGSWTCSYTAP*CLCGGISLRWG Trigger: TCCCCATCGCAGTGAAATTCCTCCACAGAGGCAGCAAGGAGCTGTGTAGGAACATGTCCAACTACCTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | GGCAACTTGCCAATCCCGTGGCTGAGTGGGTCTATTTaGGAAAGAGAGATGCTGGCGTGCATTCCTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GNLPIPWLSGSI*EREMLACIPAF Trigger: AAAGGCAGGAATGCACGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAGCCACGGGATTGGCAAGTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | TGCCTTTTCAGGGTTGTTGCACATGAAGCACTGCCATaGCCCCGCTGTTTCACTGAAGCCAAACACGTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: CLFRVVAHEALP*PRCFTEAKHVE Trigger: TTCGACGTGTTTGGCTTCAGTGAAACAGCGGGGGCATGGCAGTGCTTCATGTGCAACAACCCTGAAAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | ACAGTTGCCTTTTCAGGGTTGTTGCACATGAAGCACTaGCATGCCCCCGCTGTTTCACTGAAGCCAAACACG | + |
|
Preference number: 6 (lower is better) Translates to: TVAFSGLLHMKH*HAPAVSLKPNT Trigger: CGTGTTTGGCTTCAGTGAAACAGCGGGGGCATGGCAGTGCTTCATGTGCAACAACCCTGAAAAGGCAACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 72 bp | AGAATATGGTGGAATGGATGCTCCATATTAGCCAGCTaGCTCACCAGGTATCGTAGGCAGCTCCTGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RIWWNGCSILAS*LTRYRRQLLAL Trigger: GAGAGCCAGGAGCTGCCTACGATACCTGGTGAGCCAGCTGGCTAATATGGAGCATCCATTCCACCATATTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 72 bp | CGGCGTTTCTTAGCCACAGCTTTCACGCTCTGTACCTaGCTGAGTTCTATCGGGGAATCATCAGGGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RRFLATAFTLCT*LSSIGESSGSS Trigger: GGATGACCCTGATGATTCCCCGATAGAACTCAGCAAGGTACAGAGCGTGAAAGCTGTGGCTAAGAAACGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 90 bp | GAGCGGTCCCGGCGTTTCTTAGCCACAGCTTTCACGCTCTGTACCTaGCTGAGTTCTATCGGGGAATCATCAGGGTCATCCTTAGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: ERSRRFLATAFTLCT*LSSIGESSGSSLDF Trigger: GAAATCTAAGGATGACCCTGATGATTCCCCGATAGAACTCAGCAAGGTACAGAGCGTGAAAGCTGTGGCTAAGAAACGCCGGGACCGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 90 bp | TGTCTTAAAGGGCAACTTGCCAATCCCGTGGCTGAGTGGGTCTATTaGCGAAAGAGAGATGCTGGCGTGCATTCCTGCCTTTTCTTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: CLKGQLANPVAEWVY*RKRDAGVHSCLFFD Trigger: GTCGAAGAAAAGGCAGGAATGCACGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAGCCACGGGATTGGCAAGTTGCCCTTTAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | TGTCTGCTCCAATTGAGACATCAAGGCCAGGAGTTCTaGCAGGTGTCTGTTGATTGGTTGGGGCTGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CLLQLRHQGQEF*QVSVDWLGLLF Trigger: GAAAAGCAGCCCCAACCAATCAACAGACACCTGGCAGAACTCCTGGCCTTGATGTCTCAATTGGAGCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | CTCTTCATCCACATGACCAACAGCACCAAAGATCCTTaGCATCTGTCCAGTGAGGTAGGGGAATTGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LFIHMTNSTKDP*HLSSEVGELLC Trigger: GCAGAGCAATTCCCCTACCTCACTGGACAGATGGCAAGGATCTTTGGTGCTGTTGGTCATGTGGATGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 72 bp | TGTCTTAAAGGGCAACTTGCCAATCCCGTGGCTGAGTaGGTCTATTTGCGAAAGAGAGATGCTGGCGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: CLKGQLANPVAE*VYLRKRDAGVH Trigger: ATGCACGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAGCCACGGGATTGGCAAGTTGCCCTTTAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 90 bp | CTGCTACTGTCAGCCTTGCTGTTTTCCAGTTGTCTGGAAAGGAGCTaGGCAATGTTGGTGAAGCTGTTGCTCATTCGGAAGATGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLSALLFSSCLERS*AMLVKLLLIRKMSL Trigger: CAGGGACATCTTCCGAATGAGCAACAGCTTCACCAACATTGCCAAGCTCCTTTCCAGACAACTGGAAAACAGCAAGGCTGACAGTAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 72 bp | AGCCTTAGTAGATGGTACTGTTCTGTCTGCTCCAATTaGGACATCAAGGCCAGGAGTTCTGCCAGGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLSRWYCSVCSN*DIKARSSARCL Trigger: CAGACACCTGGCAGAACTCCTGGCCTTGATGTCTCAATTGGAGCAGACAGAACAGTACCATCTACTAAGGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 72 bp | GACCAACAGCACCAAAGATCCTTGCCATCTGTCCAGTaGGGTAGGGGAATTGCTCTGCAATCTCTTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: DQQHQRSLPSVQ*GRGIALQSLSA Trigger: TGCTGAAAGAGATTGCAGAGCAATTCCCCTACCTCACTGGACAGATGGCAAGGATCTTTGGTGCTGTTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 72 bp | GGGTGTGAAGCTGAGGAATTTCTCAGTGGTGATCCATaGGTGTCTGTCTTAAAGGGCAACTTGCCAATCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GCEAEEFLSGDP*VSVLKGNLPIP Trigger: CGGGATTGGCAAGTTGCCCTTTAAGACAGACACTCATGGATCACCACTGAGAAATTCCTCAGCTTCACACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | GGCGATTTTTGCATGTGGAGTATCTTCGTCTTTCCCTaGAGGTCTCAGGTTGTGTTCCAAGCAGGAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GDFCMWSIFVFP*RSQVVFQAGIP Trigger: TGGGATTCCTGCTTGGAACACAACCTGAGACCTGCAGGGAAAGACGAAGATACTCCACATGCAAAAATCGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | AGGAGTTCTGCCAGGTGTCTGTTGATTGGTTGGGGCTaGTTTTCATATACAGCAGGTAGCACCCTTAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSARCLLIGWG*FSYTAGSTLNS Trigger: GCTGTTAAGGGTGCTACCTGCTGTATATGAAAAGCAGCCCCAACCAATCAACAGACACCTGGCAGAACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | CTGAGTGGGTCTATTTGCGAAAGAGAGATGCTGGCGTaGATTCCTGCCTTTTCTTCGACTTCGTTATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSGSICEREMLA*IPAFSSTSLSS Trigger: GGAAGATAACGAAGTCGAAGAAAAGGCAGGAATGCACGCCAGCATCTCTCTTTCGCAAATAGACCCACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 72 bp | TCAGCCTTGCTGTTTTCCAGTTGTCTGGAAAGGAGCTaGGCAATGTTGGTGAAGCTGTTGCTCATTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SALLFSSCLERS*AMLVKLLLIRK Trigger: CTTCCGAATGAGCAACAGCTTCACCAACATTGCCAAGCTCCTTTCCAGACAACTGGAAAACAGCAAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 90 bp | AGTGCTGGTTTTTCTCCTGCTACTGTCAGCCTTGCTGTTTTCCAGTaGTCTGGAAAGGAGCTTGGCAATGTTGGTGAAGCTGTTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SAGFSPATVSLAVFQ*SGKELGNVGEAVAH Trigger: ATGAGCAACAGCTTCACCAACATTGCCAAGCTCCTTTCCAGACAACTGGAAAACAGCAAGGCTGACAGTAGCAGGAGAAAAACCAGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 72 bp | CTTCGACTTCGTTATCTTCCACACTCACACCGTTTGTaGGCACAGTATTCAAAGCCAAACTTCTGGACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRLRYLPHSHRL*AQYSKPNFWTC Trigger: GCAGGTCCAGAAGTTTGGCTTTGAATACTGTGCTCACAAACGGTGTGAGTGTGGAAGATAACGAAGTCGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS GCA 72 bp | CTCTTAATTTCCAGCAGGAGAATATGGTGGAATGGATaGTCCATATTAGCCAGCTGGCTCACCAGGTATCGT | + |
|
Preference number: 6 (lower is better) Translates to: LLISSRRIWWNG*SILASWLTRYR Trigger: ACGATACCTGGTGAGCCAGCTGGCTAATATGGAGCATCCATTCCACCATATTCTCCTGCTGGAAATTAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 72 bp | AGCATCGGGAGGAAACTGTTCAAGGCCAGTGGCTCATaGCCTGCTATTTCTATGAGAATGTTTAGGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: SIGRKLFKASGS*PAISMRMFRMM Trigger: CATCATCCTAAACATTCTCATAGAAATAGCAGGCCATGAGCCACTGGCCTTGAACAGTTTCCTCCCGATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 72 bp | TCTGTGATACTCTTAATTTCCAGCAGGAGAATATGGTaGAATGGATGCTCCATATTAGCCAGCTGGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SVILLISSRRIW*NGCSILASWLT Trigger: GGTGAGCCAGCTGGCTAATATGGAGCATCCATTCCACCATATTCTCCTGCTGGAAATTAAGAGTATCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 72 bp | CTCCTTAAGTTTTCCTTCGATGAGAGGCTGGCCATCTaGATTTACAACAGTTGCCTTTTCAGGGTTGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLKFSFDERLAI*IYNSCLFRVVA Trigger: TGCAACAACCCTGAAAAGGCAACTGTTGTAAATCAAGATGGCCAGCCTCTCATCGAAGGAAAACTTAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS TCA 72 bp | CAGGGGTCCGGTTGTAATTCTGTAAGATGCAACTCATaGTATCAGAGGCGATTTTTGCATGTGGAGTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: QGSGCNSVRCNS*YQRRFLHVEYL Trigger: AAGATACTCCACATGCAAAAATCGCCTCTGATATCATGAGTTGCATCTTACAGAATTACAACCGGACCCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 72 bp | CGGCCAGAGCCTGGGGTATTGCTCTCAGCATTTATTTaGTCTTCAAAGGCTTGGATTTTAACTTGGAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RPEPGVLLSAFI*SSKAWILTWSF Trigger: AAAACTCCAAGTTAAAATCCAAGCCTTTGAAGACAAAATAAATGCTGAGAGCAATACCCCAGGCTCTGGCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 90 bp | TTAACTTGGAGTTTTTCATGGTCTTCACTTTCAGGCTCCATGGAATaGAGTTCTCTCAGTTTCTCAGGAATGCTAACTTCAGTGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LTWSFSWSSLSGSME*SSLSFSGMLTSVLV Trigger: AACCAGCACTGAAGTTAGCATTCCTGAGAAACTGAGAGAACTCAATTCCATGGAGCCTGAAAGTGAAGACCATGAAAAACTCCAAGTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CAA 72 bp | AGTTTTTCATGGTCTTCACTTTCAGGCTCCATGGAATaGAGTTCTCTCAGTTTCTCAGGAATGCTAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFSWSSLSGSME*SSLSFSGMLTS Trigger: TGAAGTTAGCATTCCTGAGAAACTGAGAGAACTCAATTCCATGGAGCCTGAAAGTGAAGACCATGAAAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||
| CDS CCA 72 bp | TCTTCAAAGGCTTGGATTTTAACTTGGAGTTTTTCATaGTCTTCACTTTCAGGCTCCATGGAATTGAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSKAWILTWSFS*SSLSGSMELSS Trigger: AGAACTCAATTCCATGGAGCCTGAAAGTGAAGACCATGAAAAACTCCAAGTTAAAATCCAAGCCTTTGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029419.8 |
||