Pregenerated sensors for VEGFD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031380Ensembl transcript IDs: ENSMUST00000033751.8
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTCATTTGTCAGTGAACTGGGGAATCACCTAGCCGCCATTGCATaGAAATGTGGCTTTACCATGACACTAGGTCAAATCAACTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: KSFVSELGNHLAAIA*KCGFTMTLGQINFS Trigger: AGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCCACATTTCCATGCAATGGCGGCTAGGTGATTCCCCAGTTCACTGACAAATGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| 3UTR TCA 90 bp | AGGCAGTGCTTCAGTAAACCTAAAAAGTACAAGTGGAATGGGAATTaGTCAGTGCTGATCATACAAATGAAATTCCGCATAAGAAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: RQCFSKPKKYKWNGN*SVLIIQMKFRIRKK Trigger: CTTCTTTCTTATGCGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTGTACTTTTTAGGTTTACTGAAGCACTGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAGTGCTGATGGCGCAAAGACATCTGAAGCTACAAGTCATTTGTCAGTGACAGTGACAGCAACTTaGCAAAGCAGTGAGCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: FLSADGAKTSEATSHLSVTVTAT*QSSELF Trigger: AAACAGCTCACTGCTTTGTCAAGTTGCTGTCACTGT...CACTGACAAATGACTTGTAGCTTCAGATGTCTTTGCGCCATCAGCACTCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTACAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGCTAGCCGCCATTGCATaGAAATGTGGCTTTACCATG | + |
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Preference number: 2 (lower is better) Translates to: KVQVEWELISADHTNEIPLAAIA*KCGFTM Trigger: CATGGTAAAGCCACATTTCCATGCAATGGCGGCTAG...CGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTGTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| 3UTR TCA 72 bp | GCGCAAAGACATCTGAAGCTACAAGTCATTTGTCAGTaGACTGGGGAATCACCTAGCCGCCATTGCATGGAA | + |
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Preference number: 3 (lower is better) Translates to: AQRHLKLQVICQ*TGESPSRHCME Trigger: TTCCATGCAATGGCGGCTAGGTGATTCCCCAGTTCACTGACAAATGACTTGTAGCTTCAGATGTCTTTGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| 3UTR CCA 72 bp | GTCAGTGAACTGGGGAATCACCTAGCCGCCATTGCATaGAAATGTGGCTTTACCATGACACTAGGTCAAATC | + |
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Preference number: 3 (lower is better) Translates to: VSELGNHLAAIA*KCGFTMTLGQI Trigger: GATTTGACCTAGTGTCATGGTAAAGCCACATTTCCATGCAATGGCGGCTAGGTGATTCCCCAGTTCACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| 3UTR TCA 72 bp | ATGAAATTCCGCATAAGAAAGAAGCACAATAACTCATaGGCATTGCCCTTGGACTTTGCCAGCCCGAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: MKFRIRKKHNNS*ALPLDFASPRN Trigger: GTTCCTCGGGCTGGCAAAGTCCAAGGGCAATGCTCATGAGTTATTGTGCTTCTTTCTTATGCGGAATTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| 3UTR TCA 72 bp | TTCAGTAAACCTAAAAAGTACAAGTGGAATGGGAATTaGTCAGTGCTGATCATACAAATGAAATTCCGCATA | + |
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Preference number: 3 (lower is better) Translates to: FSKPKKYKWNGN*SVLIIQMKFRI Trigger: TATGCGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTGTACTTTTTAGGTTTACTGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGAGTGCTGATGGCGCAAAGACATCTGAAGCTACAAGTCATTTGTCAGTGGATGGCGGGGGCCCGTaGGCAAGCACTTACAACCCG | + |
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Preference number: 4 (lower is better) Translates to: FLSADGAKTSEATSHLSVDGGGP*ASTYNP Trigger: CGGGTTGTAAGTGCTTGCCCACGGGCCCCCGCCATC...CACTGACAAATGACTTGTAGCTTCAGATGTCTTTGCGCCATCAGCACTCAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR TCA 90 bp | GGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCGGGGATTTCCGGGTGCTGAATaGGATCTCCCGGACATGGTG | + |
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Preference number: 4 (lower is better) Translates to: GFTMTLGQINFSNTWRRGFPGAE*DLPDMV Trigger: CACCATGTCCGGGAGATCTCATTCAGCACCCGGAAA...TCCCCGCCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | GGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCGGGGAAATCTGGTGGAGCGATaGGATGCTGAGCGTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: GFTMTLGQINFSNTWRRGNLVER*DAERES Trigger: GGACTCACGCTCAGCATCCCATCGCTCCACCAGATT...TCCCCGCCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR TCA 90 bp | TGTGGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCGGGTCCATGTTCGCTCCTaGAGCCCTGCACCAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: CGFTMTLGQINFSNTWRRVHVRS*SPAPST Trigger: TGTACTTGGTGCAGGGCTTCAGGAGCGAACATGGAC...CCGCCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | TGTGGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCGGAAGTTGCCGCAAATCTaGTGGAGCGATGGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: CGFTMTLGQINFSNTWRRKLPQI*WSDGML Trigger: CAGCATCCCATCGCTCCACCAGATTTGCGGCAACTT...CCGCCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | GGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCGGGGATTCTGTCCCAGGCAGTaGAGTCTCGTCTTGCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: GFTMTLGQINFSNTWRRGFCPRQ*SLVLQN Trigger: GTTTTGCAAGACGAGACTCCACTGCCTGGGACAGAA...TCCCCGCCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | AGCCGCCATTGCATGGAAATGTGGCTTTACCATGACACTAGGTCAAATCAACTTGCGGTCCACAGAGAGTaGGTTCCTGGAGGTAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SRHCMEMWLYHDTRSNQLAVHRE*VPGGKS Trigger: ACTCTTACCTCCAGGAACCCACTCTCTGTGGACCGC...AAGTTGATTTGACCTAGTGTCATGGTAAAGCCACATTTCCATGCAATGGCGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR TCA 90 bp | TACAAGTCATTTGTCAGTGAACTGGGGAATCACCTAGCCGCCATTGCATGGAAAGCACATGTTCTGGTGTaGAAAGGACATCTGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: YKSFVSELGNHLAAIAWKAHVLV*KGHLSS Trigger: TGAGGACAGATGTCCTTTTCACACCAGAACATGTGC...TTTCCATGCAATGGCGGCTAGGTGATTCCCCAGTTCACTGACAAATGACTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | AGCCGCCATTGCATGGAAATGTGGCTTTACCATGACACTAGGTCAAATCAACTTCAGATCGTTCCAACATaGACCGGGATGATCGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: SRHCMEMWLYHDTRSNQLQIVPT*TGMIAQ Trigger: TTGAGCGATCATCCCGGTCCATGTTGGAACGATCTG...AAGTTGATTTGACCTAGTGTCATGGTAAAGCCACATTTCCATGCAATGGCGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGAGTGCTGATGGCGCAAAGACATCTGAAGCTACAAGTCATTTGTCAGTGTCTCTAGGGCTGCATTaGGTCCTCTGCCATTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FLSADGAKTSEATSHLSVSLGLH*VLCHSS Trigger: TGAAGAATGGCAGAGGACCCAATGCAGCCCTAGAGA...CACTGACAAATGACTTGTAGCTTCAGATGTCTTTGCGCCATCAGCACTCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | GGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCGGGGAACAGCTGCAGGTGTCTaGGTGAAAAATCTTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: GFTMTLGQINFSNTWRRGTAAGV*VKNLVL Trigger: AAGCACAAGATTTTTCACCCAGACACCTGCAGCTGT...TCCCCGCCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR GCA 90 bp | AGCCGCCATTGCATGGAAATGTGGCTTTACCATGACACTAGGTCAAATCAACTTAGTGTCATAGAAAGTTaGCGCAAATCTGGTGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: SRHCMEMWLYHDTRSNQLSVIES*RKSGGA Trigger: CGCTCCACCAGATTTGCGGCAACTTTCTATGACACT...AAGTTGATTTGACCTAGTGTCATGGTAAAGCCACATTTCCATGCAATGGCGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | AAATGTGGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGTCTTCCCCAGCTCACTaGCGACTTCTACGCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: KCGFTMTLGQINFSNTWRSSPAH*RLLRMS Trigger: AGACATGCGTAGAAGTCGCCAGTGAGCTGGGGAAGA...CCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCCACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGAGTGCTGATGGCGCAAAGACATCTGAAGCTACAAGTCATTTGTCAGTGGTGCTTTCCACAGGCTaGCTTTCTACTTGCACATGT | + |
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Preference number: 4 (lower is better) Translates to: FLSADGAKTSEATSHLSVVLSTG*LSTCTC Trigger: ACATGTGCAAGTAGAAAGCCAGCCTGTGGAAAGCAC...CACTGACAAATGACTTGTAGCTTCAGATGTCTTTGCGCCATCAGCACTCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR TCA 90 bp | CAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGCATAAGGGATCTTCTGATAATTaGGTAAGGATGGCGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QVEWELISADHTNEIPHKGSSDN*VRMAGA Trigger: GGCCCCCGCCATCCTTACTCAATTATCAGAAGATCC...CTTATGCGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | AAAGTACAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGTTGCCGCAAATCTGGTaGAGCGATGGGATGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: KVQVEWELISADHTNEIPLPQIW*SDGMLS Trigger: GCTCAGCATCCCATCGCTCCACCAGATTTGCGGCAA...CGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTGTACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR TCA 90 bp | CAATCGAGTGGCACCTACTACTCTGTTTCAGGCAACCTTTTCTTATTCATCAAACTGCAGGTGTCTGGGTaGAAAATCTTGTGCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: QSSGTYYSVSGNLFLFIKLQVSG*KILCFW Trigger: CCAAAAGCACAAGATTTTTCACCCAGACACCTGCAG...TTTGATGAATAAGAAAAGGTTGCCTGAAACAGAGTAGTAGGTGCCACTCGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR GCA 90 bp | AGCCGCCATTGCATGGAAATGTGGCTTTACCATGACACTAGGTCAAATCAACTTTGGAGATGTAGGAGGTaGTTGTGTTCATACACATCA | + |
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Preference number: 4 (lower is better) Translates to: SRHCMEMWLYHDTRSNQLWRCRR*LCSYTS Trigger: TGATGTGTATGAACACAAGCACCTCCTACATCTCCA...AAGTTGATTTGACCTAGTGTCATGGTAAAGCCACATTTCCATGCAATGGCGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR GCA 90 bp | CAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGCATAAGTGCACTCAAAGCAACTaGAGTTTTCCGGGTGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: QVEWELISADHTNEIPHKCTQSN*SFPGAE Trigger: TTCAGCACCCGGAAAACTGCAGTTGCTTTGAGTGCA...CTTATGCGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR GCA 90 bp | CAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGCATAAGATCTGTCCTCACAGCTaGAGGTGTCTGGGTGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: QVEWELISADHTNEIPHKICPHS*RCLGEK Trigger: TTTTTCACCCAGACACCTGCAGCTGTGAGGACAGAT...CTTATGCGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | CAATCGAGTGGCACCTACTACTCTGTTTCAGGCAACCTTTTCTTATTCATCAAATCTCAAAGAGCTGTTTaGAGATGTAGGAGGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QSSGTYYSVSGNLFLFIKSQRAV*RCRRCL Trigger: CAAGCACCTCCTACATCTCCAAACAGCTCTTTGAGA...TTTGATGAATAAGAAAAGGTTGCCTGAAACAGAGTAGTAGGTGCCACTCGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR TCA 90 bp | AAAGTACAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGACACATGGAACATCATaGGGATATTCCCCATTCCCC | + |
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Preference number: 4 (lower is better) Translates to: KVQVEWELISADHTNEIPTHGTS*GYSPFP Trigger: GGGGAATGGGGAATATCCTCATGATGTTCCATGTGT...CGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTGTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR GCA 90 bp | ACATCAGGCAGTGCTTCAGTAAACCTAAAAAGTACAAGTGGAATGGGAATTGATCTCCAAACTAGAAGCTaGTCGGATCTGTTGTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: TSGSASVNLKSTSGMGIDLQTRS*SDLLFR Trigger: TCTGAACAACAGATCCGAGCAGCTTCTAGTTTGGAG...ATCAATTCCCATTCCACTTGTACTTTTTAGGTTTACTGAAGCACTGCCTGATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | AAATGTGGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCACTTACAACCCGTATaGTTGGCAATTTTAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: KCGFTMTLGQINFSNTWRHLQPV*LAILTG Trigger: GCCTGTTAAAATTGCCAACCATACGGGTTGTAAGTG...CCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCCACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | ACATCAGGCAGTGCTTCAGTAAACCTAAAAAGTACAAGTGGAATGGGAATTGATAAAATCTTGTGCTTTTaGCAGCAGCTCTCCAGACTT | + |
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Preference number: 4 (lower is better) Translates to: TSGSASVNLKSTSGMGIDKILCF*QQLSRL Trigger: AAGTCTGGAGAGCTGCTGCCAAAAGCACAAGATTTT...ATCAATTCCCATTCCACTTGTACTTTTTAGGTTTACTGAAGCACTGCCTGATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | AAAGTACAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGAGAAAAATCCTTCACTaGTCCATGTTCGCTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: KVQVEWELISADHTNEIPRKILH*SMFAPE Trigger: TTCAGGAGCGAACATGGACCAGTGAAGGATTTTTCT...CGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTGTACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR GCA 90 bp | AATCGAGTGGCACCTACTACTCTGTTTCAGGCAACCTTTTCTTATTCATCAAAAAGTGGAGTCTCGTCTTaGAAAACACATTTACATTTG | + |
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Preference number: 4 (lower is better) Translates to: NRVAPTTLFQATFSYSSKSGVSS*KTHLHL Trigger: CAAATGTAAATGTGTTTTGCAAGACGAGACTCCACT...TTTTGATGAATAAGAAAAGGTTGCCTGAAACAGAGTAGTAGGTGCCACTCGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | AAAGTACAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGTACTTGCACATGTTCTaGTGTGAAAAGGACATCTGT | + |
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Preference number: 4 (lower is better) Translates to: KVQVEWELISADHTNEIPYLHMF*CEKDIC Trigger: ACAGATGTCCTTTTCACACCAGAACATGTGCAAGTA...CGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTGTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CCA 90 bp | AAAGTACAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGAAACACATTTACATTTaGTGTTATCCCACAGCATGT | + |
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Preference number: 4 (lower is better) Translates to: KVQVEWELISADHTNEIPKHIYI*CYPTAC Trigger: ACATGCTGTGGGATAACACCAAATGTAAATGTGTTT...CGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTGTACTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS TCA 90 bp | TGGAGCGATGGGATGCTGAGCGTGAGTCCATACTGGCAAGACTTTTaGGCTTCAACCGGCATCGCCACAGCTTCCAGTCCTCAGAGTGCG | + |
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Preference number: 5 (lower is better) Translates to: WSDGMLSVSPYWQDF*ASTGIATASSPQSA Trigger: CGCACTCTGAGGACTGGAAGCTGTGGCGATGCCGGTTGAAGCTCAAAAGTCTTGCCAGTATGGACTCACGCTCAGCATCCCATCGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CCA 90 bp | TCAAGGGTTCTCCTGGCTGTAGAGTCCCTGGGCCCTTGTCTCCTTTaGAAAGCGCCAGTGCTTTCCACAGGCTGGCTTTCTACTTGCACA | + |
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Preference number: 5 (lower is better) Translates to: SRVLLAVESLGPCLL*KAPVLSTGWLSTCT Trigger: TGTGCAAGTAGAAAGCCAGCCTGTGGAAAGCACTGGCGCTTTCCAAAGGAGACAAGGGCCCAGGGACTCTACAGCCAGGAGAACCCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 90 bp | CTTTTGAGCTTCAACCGGCATCGCCACAGCTTCCAGTCCTCAGAGTaGGCGATTTGCAGCAACTCCTCCAAACTAGAAGCTGCTCGGATC | + |
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Preference number: 5 (lower is better) Translates to: LLSFNRHRHSFQSSE*AICSNSSKLEAARI Trigger: GATCCGAGCAGCTTCTAGTTTGGAGGAGTTGCTGCAAATCGCGCACTCTGAGGACTGGAAGCTGTGGCGATGCCGGTTGAAGCTCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 90 bp | TTCAACCGGCATCGCCACAGCTTCCAGTCCTCAGAGTGCGCGATTTaGAGCAACTCCTCCAAACTAGAAGCTGCTCGGATCTGTTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: FNRHRHSFQSSECAI*SNSSKLEAARICCS Trigger: TGAACAACAGATCCGAGCAGCTTCTAGTTTGGAGGAGTTGCTGCAAATCGCGCACTCTGAGGACTGGAAGCTGTGGCGATGCCGGTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CCA 90 bp | AGCGCCAGTGCTTTCCACAGGCTGGCTTTCTACTTGCACATGTTCTaGTGTGAAAAGGACATCTGTCCTCACAGCTGCAGGTGTCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SASAFHRLAFYLHMF*CEKDICPHSCRCLG Trigger: ACCCAGACACCTGCAGCTGTGAGGACAGATGTCCTTTTCACACCAGAACATGTGCAAGTAGAAAGCCAGCCTGTGGAAAGCACTGGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CCA 90 bp | CTGGGCCCTTGTCTCCTTTGGAAAGCGCCAGTGCTTTCCACAGGCTaGCTTTCTACTTGCACATGTTCTGGTGTGAAAAGGACATCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LGPCLLWKAPVLSTG*LSTCTCSGVKRTSV Trigger: GACAGATGTCCTTTTCACACCAGAACATGTGCAAGTAGAAAGCCAGCCTGTGGAAAGCACTGGCGCTTTCCAAAGGAGACAAGGGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS TCA 90 bp | AGGACATTCATCTTCTTCTGGGGTCTGAATGGATCTTCTGATAATTaGGTAAGGATGGCGGGGGCCCGTGGGCAAGCACTTACAACCCGT | + |
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Preference number: 5 (lower is better) Translates to: RTFIFFWGLNGSSDN*VRMAGARGQALTTR Trigger: ACGGGTTGTAAGTGCTTGCCCACGGGCCCCCGCCATCCTTACTCAATTATCAGAAGATCCATTCAGACCCCAGAAGAAGATGAATGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 90 bp | GCAACTGCAGTTTTCCGGGTGCTGAATGAGATCTCCCGGACATGGTaGTTTACAGACGCACTCACAGCGATCTTCATCAAACGTCATGTG | + |
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Preference number: 5 (lower is better) Translates to: ATAVFRVLNEISRTW*FTDALTAIFIKRHV Trigger: CACATGACGTTTGATGAAGATCGCTGTGAGTGCGTCTGTAAAGCACCATGTCCGGGAGATCTCATTCAGCACCCGGAAAACTGCAGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 90 bp | CTCCTTTGGAAAGCGCCAGTGCTTTCCACAGGCTGGCTTTCTACTTaGACATGTTCTGGTGTGAAAAGGACATCTGTCCTCACAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LLWKAPVLSTGWLST*TCSGVKRTSVLTAA Trigger: TGCAGCTGTGAGGACAGATGTCCTTTTCACACCAGAACATGTGCAAGTAGAAAGCCAGCCTGTGGAAAGCACTGGCGCTTTCCAAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | TGTGGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCGGGGGCCCTTGTCTCCTTaGGAAAGCGCCAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGFTMTLGQINFSNTWRRGPLSP*ESASAF Trigger: GAAAGCACTGGCGCTTTCCAAAGGAGACAAGGGCCC...CCGCCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
||
| CDS TCA 90 bp | GACTTTCTTTGCACTCAAAGCAACTGCAGTTTTCCGGGTGCTGAATaGGATCTCCCGGACATGGTGCTTTACAGACGCACTCACAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: DFLCTQSNCSFPGAE*DLPDMVLYRRTHSD Trigger: ATCGCTGTGAGTGCGTCTGTAAAGCACCATGTCCGGGAGATCTCATTCAGCACCCGGAAAACTGCAGTTGCTTTGAGTGCAAAGAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS TCA 90 bp | TCCAGACTTTCTTTGCACTCAAAGCAACTGCAGTTTTCCGGGTGCTaGATGAGATCTCCCGGACATGGTGCTTTACAGACGCACTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SRLSLHSKQLQFSGC*MRSPGHGALQTHSQ Trigger: CTGTGAGTGCGTCTGTAAAGCACCATGTCCGGGAGATCTCATTCAGCACCCGGAAAACTGCAGTTGCTTTGAGTGCAAAGAAAGTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CCA 90 bp | AAAGCAACTGCAGTTTTCCGGGTGCTGAATGAGATCTCCCGGACATaGTGCTTTACAGACGCACTCACAGCGATCTTCATCAAACGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KATAVFRVLNEISRT*CFTDALTAIFIKRH Trigger: ATGACGTTTGATGAAGATCGCTGTGAGTGCGTCTGTAAAGCACCATGTCCGGGAGATCTCATTCAGCACCCGGAAAACTGCAGTTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGTGCTGATGGCGCAAAGACATCTGAAGCTACAAGTCATTTGTCAGTGCTCTCTAGGGCTGCATaGGGTCCTCTGCCATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLSADGAKTSEATSHLSVLSRAA*GPLPFF Trigger: GAAGAATGGCAGAGGACCCAATGCAGCCCTAGAGAG...CACTGACAAATGACTTGTAGCTTCAGATGTCTTTGCGCCATCAGCACTCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | CAATCGAGTGGCACCTACTACTCTGTTTCAGGCAACCTTTTCTTATTCATCAAAATCACACCCTCTTCGTaGCAGCAGCCTCCACACCGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSGTYYSVSGNLFLFIKITPSS*QQPPHR Trigger: CCGGTGTGGAGGCTGCTGCAACGAAGAGGGTGTGAT...TTTGATGAATAAGAAAAGGTTGCCTGAAACAGAGTAGTAGGTGCCACTCGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | TGTGGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCGGGGCTTGAAGAATGTGTaGGTTGTCTTCCCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CGFTMTLGQINFSNTWRRGLKNV*VVFPSS Trigger: TGAGCTGGGGAAGACAACCAACACATTCTTCAAGCC...CCGCCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | ACCCCTTCCTTTCTGAGTGCTGATGGCGCAAAGACATCTGAAGCTACAAGTCATTTACAACCCGTATGGTaGGCAATTTTAACAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TPSFLSADGAKTSEATSHLQPVW*AILTGT Trigger: AGTGCCTGTTAAAATTGCCAACCATACGGGTTGTAA...ATGACTTGTAGCTTCAGATGTCTTTGCGCCATCAGCACTCAGAAAGGAAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | TACAAGTCATTTGTCAGTGAACTGGGGAATCACCTAGCCGCCATTGCATGGAAAAAAAATCTTGTGCTTTaGGCAGCAGCTCTCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: YKSFVSELGNHLAAIAWKKNLVL*AAALQT Trigger: AGTCTGGAGAGCTGCTGCCAAAAGCACAAGATTTTT...TTTCCATGCAATGGCGGCTAGGTGATTCCCCAGTTCACTGACAAATGACTTGTA 46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | AAATGTGGCTTTACCATGACACTAGGTCAAATCAACTTTTCTAACACCTGGAGGCAGTGTCATAGAAAGTaGCCGCAAATCTGGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KCGFTMTLGQINFSNTWRQCHRK*PQIWWS Trigger: GCTCCACCAGATTTGCGGCAACTTTCTATGACACTG...CCTCCAGGTGTTAGAAAAGTTGATTTGACCTAGTGTCATGGTAAAGCCACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | CAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGCATAAGAGCTGCTCGGATCTGTaGTTCAGATCGTTCCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: QVEWELISADHTNEIPHKSCSDL*FRSFQH Trigger: ATGTTGGAACGATCTGAACAACAGATCCGAGCAGCT...CTTATGCGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
||
| CDS-3UTR CAA 90 bp | AATCGAGTGGCACCTACTACTCTGTTTCAGGCAACCTTTTCTTATTCATCAAAACTCTCCAGACTTTCTTaGCACTCAAAGCAACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NRVAPTTLFQATFSYSSKLSRLS*HSKQLQ Trigger: CTGCAGTTGCTTTGAGTGCAAAGAAAGTCTGGAGAG...TTTTGATGAATAAGAAAAGGTTGCCTGAAACAGAGTAGTAGGTGCCACTCGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | AAAGTACAAGTGGAATGGGAATTGATCAGTGCTGATCATACAAATGAAATTCCGAGATGTAGGAGGTGCTaGTGTTCATACACATCACAC | + |
|
Preference number: 5 (lower is better) Translates to: KVQVEWELISADHTNEIPRCRRC*CSYTSH Trigger: GTGTGATGTGTATGAACACAAGCACCTCCTACATCT...CGGAATTTCATTTGTATGATCAGCACTGATCAATTCCCATTCCACTTGTACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS-3UTR CAA 90 bp | ACATCAGGCAGTGCTTCAGTAAACCTAAAAAGTACAAGTGGAATGGGAATTGATAAAACACATTTACATTaGGTGTTATCCCACAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TSGSASVNLKSTSGMGIDKTHLH*VLSHSM Trigger: CATGCTGTGGGATAACACCAAATGTAAATGTGTTTT...ATCAATTCCCATTCCACTTGTACTTTTTAGGTTTACTGAAGCACTGCCTGATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CCA 72 bp | CTCCTGGCTGTAGAGTCCCTGGGCCCTTGTCTCCTTTaGAAAGCGCCAGTGCTTTCCACAGGCTGGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLAVESLGPCLL*KAPVLSTGWLS Trigger: AGAAAGCCAGCCTGTGGAAAGCACTGGCGCTTTCCAAAGGAGACAAGGGCCCAGGGACTCTACAGCCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CAA 72 bp | TCTCCTGGCTGTAGAGTCCCTGGGCCCTTGTCTCCTTaGGAAAGCGCCAGTGCTTTCCACAGGCTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPGCRVPGPLSP*ESASAFHRLAF Trigger: GAAAGCCAGCCTGTGGAAAGCACTGGCGCTTTCCAAAGGAGACAAGGGCCCAGGGACTCTACAGCCAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CAA 90 bp | GTGGAGCGATGGGATGCTGAGCGTGAGTCCATACTGGCAAGACTTTaGAGCTTCAACCGGCATCGCCACAGCTTCCAGTCCTCAGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VERWDAERESILARL*SFNRHRHSFQSSEC Trigger: GCACTCTGAGGACTGGAAGCTGTGGCGATGCCGGTTGAAGCTCAAAAGTCTTGCCAGTATGGACTCACGCTCAGCATCCCATCGCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CCA 72 bp | TGGCGGGGGCCCGTGGGCAAGCACTTACAACCCGTATaGTTGGCAATTTTAACAGGCACTAACTCGGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: WRGPVGKHLQPV*LAILTGTNSGT Trigger: AGTGCCCGAGTTAGTGCCTGTTAAAATTGCCAACCATACGGGTTGTAAGTGCTTGCCCACGGGCCCCCGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS TCA 72 bp | GGGATGCTGAGCGTGAGTCCATACTGGCAAGACTTTTaGGCTTCAACCGGCATCGCCACAGCTTCCAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GMLSVSPYWQDF*ASTGIATASSP Trigger: AGGACTGGAAGCTGTGGCGATGCCGGTTGAAGCTCAAAAGTCTTGCCAGTATGGACTCACGCTCAGCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 72 bp | CATCGCCACAGCTTCCAGTCCTCAGAGTGCGCGATTTaGAGCAACTCCTCCAAACTAGAAGCTGCTCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: HRHSFQSSECAI*SNSSKLEAARI Trigger: GATCCGAGCAGCTTCTAGTTTGGAGGAGTTGCTGCAAATCGCGCACTCTGAGGACTGGAAGCTGTGGCGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CAA 72 bp | GCATCGCCACAGCTTCCAGTCCTCAGAGTGCGCGATTaGCAGCAACTCCTCCAAACTAGAAGCTGCTCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ASPQLPVLRVRD*QQLLQTRSCSD Trigger: ATCCGAGCAGCTTCTAGTTTGGAGGAGTTGCTGCAAATCGCGCACTCTGAGGACTGGAAGCTGTGGCGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CAA 72 bp | TGGGATGCTGAGCGTGAGTCCATACTGGCAAGACTTTaGAGCTTCAACCGGCATCGCCACAGCTTCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WDAERESILARL*SFNRHRHSFQS Trigger: GGACTGGAAGCTGTGGCGATGCCGGTTGAAGCTCAAAAGTCTTGCCAGTATGGACTCACGCTCAGCATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CAA 72 bp | CGGGGGCCCGTGGGCAAGCACTTACAACCCGTATGGTaGGCAATTTTAACAGGCACTAACTCGGGCACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RGPVGKHLQPVW*AILTGTNSGTD Trigger: ATCAGTGCCCGAGTTAGTGCCTGTTAAAATTGCCAACCATACGGGTTGTAAGTGCTTGCCCACGGGCCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CAA 90 bp | CTTCAACCGGCATCGCCACAGCTTCCAGTCCTCAGAGTGCGCGATTaGCAGCAACTCCTCCAAACTAGAAGCTGCTCGGATCTGTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQPASPQLPVLRVRD*QQLLQTRSCSDLLF Trigger: GAACAACAGATCCGAGCAGCTTCTAGTTTGGAGGAGTTGCTGCAAATCGCGCACTCTGAGGACTGGAAGCTGTGGCGATGCCGGTTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 72 bp | TTCAACCGGCATCGCCACAGCTTCCAGTCCTCAGAGTaGGCGATTTGCAGCAACTCCTCCAAACTAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FNRHRHSFQSSE*AICSNSSKLEA Trigger: AGCTTCTAGTTTGGAGGAGTTGCTGCAAATCGCGCACTCTGAGGACTGGAAGCTGTGGCGATGCCGGTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 72 bp | AGTCCCTGGGCCCTTGTCTCCTTTGGAAAGCGCCAGTaGTTTCCACAGGCTGGCTTTCTACTTGCACATGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPWALVSFGKRQ*FPQAGFLLAHV Trigger: AACATGTGCAAGTAGAAAGCCAGCCTGTGGAAAGCACTGGCGCTTTCCAAAGGAGACAAGGGCCCAGGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CAA 90 bp | TCTCCTTTGGAAAGCGCCAGTGCTTTCCACAGGCTGGCTTTCTACTaGCACATGTTCTGGTGTGAAAAGGACATCTGTCCTCACAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPLESASAFHRLAFY*HMFWCEKDICPHSC Trigger: GCAGCTGTGAGGACAGATGTCCTTTTCACACCAGAACATGTGCAAGTAGAAAGCCAGCCTGTGGAAAGCACTGGCGCTTTCCAAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS TCA 72 bp | ATCTTCTTCTGGGGTCTGAATGGATCTTCTGATAATTaGGTAAGGATGGCGGGGGCCCGTGGGCAAGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: IFFWGLNGSSDN*VRMAGARGQAL Trigger: AAGTGCTTGCCCACGGGCCCCCGCCATCCTTACTCAATTATCAGAAGATCCATTCAGACCCCAGAAGAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS TCA 72 bp | TGCACTCAAAGCAACTGCAGTTTTCCGGGTGCTGAATaGGATCTCCCGGACATGGTGCTTTACAGACGCACT | + |
|
Preference number: 6 (lower is better) Translates to: CTQSNCSFPGAE*DLPDMVLYRRT Trigger: AGTGCGTCTGTAAAGCACCATGTCCGGGAGATCTCATTCAGCACCCGGAAAACTGCAGTTGCTTTGAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS TCA 72 bp | CCACAGGCTGGCTTTCTACTTGCACATGTTCTGGTGTaGAAAGGACATCTGTCCTCACAGCTGCAGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PQAGFLLAHVLV*KGHLSSQLQVS Trigger: AGACACCTGCAGCTGTGAGGACAGATGTCCTTTTCACACCAGAACATGTGCAAGTAGAAAGCCAGCCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 72 bp | AGGTGCTTGTGTTCATACACATCACACCCTCTTCGTTaGAGCAGCCTCCACACCGGAAGACATTTACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RCLCSYTSHPLR*SSLHTGRHLHR Trigger: CCTGTGTAAATGTCTTCCGGTGTGGAGGCTGCTGCAACGAAGAGGGTGTGATGTGTATGAACACAAGCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CCA 72 bp | GTGTTTCAGTGTCATAGAAAGTTGCCGCAAATCTGGTaGAGCGATGGGATGCTGAGCGTGAGTCCATACTGG | + |
|
Preference number: 6 (lower is better) Translates to: VFQCHRKLPQIW*SDGMLSVSPYW Trigger: CCAGTATGGACTCACGCTCAGCATCCCATCGCTCCACCAGATTTGCGGCAACTTTCTATGACACTGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CAA 72 bp | GAGGTGCTTGTGTTCATACACATCACACCCTCTTCGTaGCAGCAGCCTCCACACCGGAAGACATTTACACAG | + |
|
Preference number: 6 (lower is better) Translates to: EVLVFIHITPSS*QQPPHRKTFTQ Trigger: CTGTGTAAATGTCTTCCGGTGTGGAGGCTGCTGCAACGAAGAGGGTGTGATGTGTATGAACACAAGCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
||
| CDS TCA 72 bp | TCTTTGCACTCAAAGCAACTGCAGTTTTCCGGGTGCTaGATGAGATCTCCCGGACATGGTGCTTTACAGACG | + |
|
Preference number: 6 (lower is better) Translates to: SLHSKQLQFSGC*MRSPGHGALQT Trigger: CGTCTGTAAAGCACCATGTCCGGGAGATCTCATTCAGCACCCGGAAAACTGCAGTTGCTTTGAGTGCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
||
| CDS TCA 72 bp | AAAGGACATCTGTCCTCACAGCTGCAGGTGTCTGGGTaGAAAATCTTGTGCTTTTGGCAGCAGCTCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KGHLSSQLQVSG*KILCFWQQLSR Trigger: TCTGGAGAGCTGCTGCCAAAAGCACAAGATTTTTCACCCAGACACCTGCAGCTGTGAGGACAGATGTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 72 bp | GTGCGCGATTTGCAGCAACTCCTCCAAACTAGAAGCTaGTCGGATCTGTTGTTCAGATCGTTCCAACATGGA | + |
|
Preference number: 6 (lower is better) Translates to: VRDLQQLLQTRS*SDLLFRSFQHG Trigger: TCCATGTTGGAACGATCTGAACAACAGATCCGAGCAGCTTCTAGTTTGGAGGAGTTGCTGCAAATCGCGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS GCA 72 bp | AAAGCGCCAGTGCTTTCCACAGGCTGGCTTTCTACTTaGACATGTTCTGGTGTGAAAAGGACATCTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: KAPVLSTGWLST*TCSGVKRTSVL Trigger: GAGGACAGATGTCCTTTTCACACCAGAACATGTGCAAGTAGAAAGCCAGCCTGTGGAAAGCACTGGCGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CCA 72 bp | CCATGTTCGCTCCTGAAGCCCTGCACCAAGTACACATaGAACATCATGAGGATATTCCCCATTCCCCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: PCSLLKPCTKYT*NIMRIFPIPHS Trigger: AGAATGGGGAATGGGGAATATCCTCATGATGTTCCATGTGTACTTGGTGCAGGGCTTCAGGAGCGAACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
||
| CDS CAA 72 bp | GAAAGCGCCAGTGCTTTCCACAGGCTGGCTTTCTACTaGCACATGTTCTGGTGTGAAAAGGACATCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ESASAFHRLAFY*HMFWCEKDICP Trigger: AGGACAGATGTCCTTTTCACACCAGAACATGTGCAAGTAGAAAGCCAGCCTGTGGAAAGCACTGGCGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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| CDS CAA 90 bp | TCTGTCCTCACAGCTGCAGGTGTCTGGGTGAAAAATCTTGTGCTTTaGGCAGCAGCTCTCCAGACTTTCTTTGCACTCAAAGCAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVLTAAGVWVKNLVL*AAALQTFFALKATA Trigger: TGCAGTTGCTTTGAGTGCAAAGAAAGTCTGGAGAGCTGCTGCCAAAAGCACAAGATTTTTCACCCAGACACCTGCAGCTGTGAGGACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
||
| CDS CCA 72 bp | TTAGTGTTTCAGTGTCATAGAAAGTTGCCGCAAATCTaGTGGAGCGATGGGATGCTGAGCGTGAGTCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: LVFQCHRKLPQI*WSDGMLSVSPY Trigger: GTATGGACTCACGCTCAGCATCCCATCGCTCCACCAGATTTGCGGCAACTTTCTATGACACTGAAACACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
||
| CDS CAA 90 bp | CTGGAGGTAAGAGTGGTCTTCTGTCCCAGGCAGTGGAGTCTCGTCTaGCAAAACACATTTACATTTGGTGTTATCCCACAGCATGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LEVRVVFCPRQWSLV*QNTFTFGVIPQHVN Trigger: ATTGACATGCTGTGGGATAACACCAAATGTAAATGTGTTTTGCAAGACGAGACTCCACTGCCTGGGACAGAAGACCACTCTTACCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
||
| CDS CCA 72 bp | AAGCTGCTCGGATCTGTTGTTCAGATCGTTCCAACATaGACCGGGATGATCGCTCAAAAGAAAAATCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KLLGSVVQIVPT*TGMIAQKKNPS Trigger: TGAAGGATTTTTCTTTTGAGCGATCATCCCGGTCCATGTTGGAACGATCTGAACAACAGATCCGAGCAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
||
| CDS CAA 72 bp | GGCAGTGGAGTCTCGTCTTGCAAAACACATTTACATTaGGTGTTATCCCACAGCATGTCAATAGGACAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSGVSSCKTHLH*VLSHSMSIGQS Trigger: ACTCTGTCCTATTGACATGCTGTGGGATAACACCAAATGTAAATGTGTTTTGCAAGACGAGACTCCACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033751.8 |
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