Pregenerated sensors for VEGFB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024962Ensembl transcript IDs: ENSMUST00000025914.7, ENSMUST00000130048.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCCTGTGAAGCAGGGCCATAAAAGCAGCCGGGCCCGTGGAGTCTaGAAAGCAGCTTGTCACTTTCGCGGCTTCCGGCACCTACAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: LPVKQGHKSSRARGV*KAACHFRGFRHLQV Trigger: CACCTGTAGGTGCCGGAAGCCGCGAAAGTGACAAGCTGCTTTCCAGACTCCACGGGCCCGGCTGCTTTTATGGCCCTGCTTCACAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| 3UTR CCA 90 bp | CACAGTTATCATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTaGGGTTTTCATAGTGAGGGGAGACAGCCAGCCAGAAGATGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: HSYHNRTQIPLLVEV*GFHSEGRQPARRCS Trigger: TGAGCATCTTCTGGCTGGCTGTCTCCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATGATAACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR-3UTR TCA 90 bp | CATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGCAGGTCCTGGGGCAGTaGCCTCCCAGACTGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HNRTQIPLLVEVWGFHSEQVLGQ*PPRLRR Trigger: CCTCCTCAGTCTGGGAGGTCACTGCCCCAGGACCTG...CTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATCATAACCAGGTCCTGGGGCAGTaGCCTCCCAGACTGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FHLFYQSVSVCVCHSYHNQVLGQ*PPRLRR Trigger: CCTCCTCAGTCTGGGAGGTCACTGCCCCAGGACCTG...GTTATGATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGTCTTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATCAGCCAGCCAGAAGATaGTCACTTGACCAGGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SVFHLFYQSVSVCVCHSYQPARR*SLDQGG Trigger: ACCACCCTGGTCAAGTGAGCATCTTCTGGCTGGCTG...ATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAAGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR-3UTR TCA 90 bp | CATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGAGACATGAGGTTCCTTaGCAATTGTTAGATGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: HNRTQIPLLVEVWGFHSERHEVP*QLLDGS Trigger: GCTGCCATCTAACAATTGTCAAGGAACCTCATGTCT...CTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTCTTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATCTGGGAGATAAAAGATaGCGAGAGAGCTCTCTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SVFHLFYQSVSVCVCHSYLGDKR*RESSLK Trigger: TTTTAGAGAGCTCTCTCGCCATCTTTTATCTCCCAG...ATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAAGACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGGGTTGACAATTGTTAGATaGCAGCTCTGGGAGATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: NRTQIPLLVEVWGFHSEGLTIVR*QLWEIK Trigger: TTTTATCTCCCAGAGCTGCCATCTAACAATTGTCAA...CCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR TCA 72 bp | CTGAGGAGGTTCGCCTGTGCTCCACTCTTCTCCCTGTaGAGCAGGGCCATAAAAGCAGCCGGGCCCGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LRRFACAPLFSL*SRAIKAAGPVE Trigger: CTCCACGGGCCCGGCTGCTTTTATGGCCCTGCTTCACAGGGAGAAGAGTGGAGCACAGGCGAACCTCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR TCA 72 bp | AAAAGGTCCAGGTCCTGGGGCAGTGACCTCCCAGACTaGGGAGGTTCGCCTGTGCTCCACTCTTCTCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KRSRSWGSDLPD*GGSPVLHSSPC Trigger: ACAGGGAGAAGAGTGGAGCACAGGCGAACCTCCTCAGTCTGGGAGGTCACTGCCCCAGGACCTGGACCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR CCA 72 bp | CATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTaGGGTTTTCATAGTGAGGGGAGACAGCCAGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HNRTQIPLLVEV*GFHSEGRQPAR Trigger: TCTGGCTGGCTGTCTCCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTCTTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATACCCAAATCCCGTTATaGGTAGAAGTTTGGGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SVFHLFYQSVSVCVCHSYTQIPL*VEVWGF Trigger: AAAACCCCAAACTTCTACCAATAACGGGATTTGGGT...ATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAAGACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATAAAAGCAGCCGGGCCCGTGGAGTCTGGAAAGCAGCTTGTCACTTTCGCCGGGGGTCAGGGCGTTaGCGGCGCTGGGTGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHKSSRARGVWKAACHFRRGSGR*RRWVQG Trigger: GCCTTGCACCCAGCGCCGTCAACGCCCTGACCCCCG...GCGAAAGTGACAAGCTGCTTTCCAGACTCCACGGGCCCGGCTGCTTTTATGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTCCACTCTTCTCCCTGTGAAGCAGGGCCATAAAAGCAGCCGGGCCCGTGTTGACGGCGCTGGGTaGAAGGCGGGCAGAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLLPVKQGHKSSRARVDGAG*KAGRGS Trigger: GGATCCTCTGCCCGCCTTGCACCCAGCGCCGTCAAC...ACGGGCCCGGCTGCTTTTATGGCCCTGCTTCACAGGGAGAAGAGTGGAGCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATAAAAGCAGCCGGGCCCGTGGAGTCTGGAAAGCAGCTTGTCACTTTCGCTGGGACACAGGGGCCTaGGTGCGAGCCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHKSSRARGVWKAACHFRWDTGA*VRASCS Trigger: GCTGCAGCTGGCTCGCACCCAGGCCCCTGTGTCCCA...GCGAAAGTGACAAGCTGCTTTCCAGACTCCACGGGCCCGGCTGCTTTTATGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCCACTCTTCTCCCTGTGAAGCAGGGCCATAAAAGCAGCCGGGCCCGTGCGGGCAGAGGATCCTaGGGCTGGAGTGGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLLPVKQGHKSSRARAGRGS*GWSGMD Trigger: ATCCATCCCACTCCAGCCCCAGGATCCTCTGCCCGC...ACGGGCCCGGCTGCTTTTATGGCCCTGCTTCACAGGGAGAAGAGTGGAGCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR TCA 90 bp | CTGTGCTCCACTCTTCTCCCTGTGAAGCAGGGCCATAAAAGCAGCCGGGCCCGTGACATCTCCCCCAGCTaGCTGCTCGGGTACTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLLPVKQGHKSSRARDISPS*LLGYWI Trigger: GATCCAGTACCCGAGCAGTCAGCTGGGGGAGATGTC...ACGGGCCCGGCTGCTTTTATGGCCCTGCTTCACAGGGAGAAGAGTGGAGCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR GCA 90 bp | GTGAAGCAGGGCCATAAAAGCAGCCGGGCCCGTGGAGTCTGGAAAGCAGCTTGTGTCAGCTGGGGAGGATaGTCCCGGGGTAGAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKQGHKSSRARGVWKAACVSWGG*SRGRVP Trigger: TGGGACTCTACCCCGGGAGCATCCTCCCCAGCTGAC...ACAAGCTGCTTTCCAGACTCCACGGGCCCGGCTGCTTTTATGGCCCTGCTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR TCA 90 bp | GGCCATAAAAGCAGCCGGGCCCGTGGAGTCTGGAAAGCAGCTTGTCACTTTCGCGACATCTCCCCCAGCTaGCTGCTCGGGTACTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GHKSSRARGVWKAACHFRDISPS*LLGYWI Trigger: GATCCAGTACCCGAGCAGTCAGCTGGGGGAGATGTC...GCGAAAGTGACAAGCTGCTTTCCAGACTCCACGGGCCCGGCTGCTTTTATGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR CCA 90 bp | GGCCATAAAAGCAGCCGGGCCCGTGGAGTCTGGAAAGCAGCTTGTCACTTTCGCATGGATGATGTCAGCTaGGGAGGATGCTCCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHKSSRARGVWKAACHFRMDDVS*GGCSRG Trigger: ACCCCGGGAGCATCCTCCCCAGCTGACATCATCCAT...GCGAAAGTGACAAGCTGCTTTCCAGACTCCACGGGCCCGGCTGCTTTTATGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCTGGGAGATAAAAGATGGCGAGAGAGCTCTCTAAAAGGTCCAGGTCCTCCCCGCCCTTGGCAATaGAGGAAGCGGCGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AALGDKRWRESSLKGPGPPRPWQ*RKRRRL Trigger: CAGACGCCGCCGCTTCCTCCATTGCCAAGGGCGGGG...AGGACCTGGACCTTTTAGAGAGCTCTCTCGCCATCTTTTATCTCCCAGAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCCACTCTTCTCCCTGTGAAGCAGGGCCATAAAAGCAGCCGGGCCCGTGATCCTGGGGCTGTCTaGCTTCACAGCACTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLLPVKQGHKSSRARDPGAV*LHSTLL Trigger: AAGGAGAGTGCTGTGAAGCCAGACAGCCCCAGGATC...ACGGGCCCGGCTGCTTTTATGGCCCTGCTTCACAGGGAGAAGAGTGGAGCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGAGTCTGGAAAGCAGCTTGTCACTTTCGCGGCTTCCGGCACCTACAGGTGCTTGGTGTTGCCCAGTaGGCACACATTCCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGVWKAACHFRGFRHLQVLGVAQ*AHIPGH Trigger: ATGGCCTGGAATGTGTGCCCACTGGGCAACACCAAG...CACCTGTAGGTGCCGGAAGCCGCGAAAGTGACAAGCTGCTTTCCAGACTCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCCACTCTTCTCCCTGTGAAGCAGGGCCATAAAAGCAGCCGGGCCCGTATCTGCATTCGGACTTaGTGTTGCCCAGTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLLPVKQGHKSSRARICIRT*CCPVGT Trigger: TGTGCCCACTGGGCAACACCAAGTCCGAATGCAGAT...ACGGGCCCGGCTGCTTTTATGGCCCTGCTTCACAGGGAGAAGAGTGGAGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATAAAAGCAGCCGGGCCCGTGGAGTCTGGAAAGCAGCTTGTCACTTTCGCAGAGGATCCTGGGGCTaGAGTGGGATGGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHKSSRARGVWKAACHFRRGSWG*SGMDDV Trigger: GACATCATCCATCCCACTCCAGCCCCAGGATCCTCT...GCGAAAGTGACAAGCTGCTTTCCAGACTCCACGGGCCCGGCTGCTTTTATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR TCA 90 bp | AACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGGGCGGGGGTCAGGGCGTTaGCGGCGCTGGGTGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRTQIPLLVEVWGFHSEGRGSGR*RRWVQG Trigger: GCCTTGCACCCAGCGCCGTCAACGCCCTGACCCCCG...CCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCTGGGAGATAAAAGATGGCGAGAGAGCTCTCTAAAAGGTCCAGGTCCTCAGCCACCACAGCGCTaGACAGTCACACAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AALGDKRWRESSLKGPGPQPPQR*TVTQLG Trigger: GCCCAGCTGTGTGACTGTGCAGCGCTGTGGTGGCTG...AGGACCTGGACCTTTTAGAGAGCTCTCTCGCCATCTTTTATCTCCCAGAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | GTGAAGCAGGGCCATAAAAGCAGCCGGGCCCGTGGAGTCTGGAAAGCAGCTTGTATCTGCATTCGGACTTaGTGTTGCCCAGTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VKQGHKSSRARGVWKAACICIRT*CCPVGT Trigger: TGTGCCCACTGGGCAACACCAAGTCCGAATGCAGAT...ACAAGCTGCTTTCCAGACTCCACGGGCCCGGCTGCTTTTATGGCCCTGCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCTGGGAGATAAAAGATGGCGAGAGAGCTCTCTAAAAGGTCCAGGTCCTAGCCAGCTGCAGCAGTaGAACAAGCAGCAGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: AALGDKRWRESSLKGPGPSQLQQ*NKQQAT Trigger: CGTCGCCTGCTGCTTGTTGCACTGCTGCAGCTGGCT...AGGACCTGGACCTTTTAGAGAGCTCTCTCGCCATCTTTTATCTCCCAGAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCTTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATGGAAGCGGCGGCGTCTaGAGCGGCAGCGGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVFHLFYQSVSVCVCHSYGSGGV*SGSGRS Trigger: GGACCTGCCGCTGCCGCTGCAGACGCCGCCGCTTCC...ATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAAGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTGAGGGGAGACAGCCAGCCAGAAGATGCTCACTTGACCAGGGTGGTTAAGCTTGGTGTTGCCCAGTaGGCACACATTCCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IVRGDSQPEDAHLTRVVKLGVAQ*AHIPGH Trigger: ATGGCCTGGAATGTGTGCCCACTGGGCAACACCAAG...CTTAACCACCCTGGTCAAGTGAGCATCTTCTGGCTGGCTGTCTCCCCTCACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGGGCCCCGCCCTTGGCAATaGAGGAAGCGGCGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTQIPLLVEVWGFHSEGPRPWQ*RKRRRL Trigger: CAGACGCCGCCGCTTCCTCCATTGCCAAGGGCGGGG...CCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGGGGGAACAGAGCGGGGCTaGGGACGGTGGTGGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: NRTQIPLLVEVWGFHSEGGTERG*GRWWGM Trigger: CATACCCCACCACCGTCCCCAGCCCCGCTCTGTTCC...CCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCTGGGAGATAAAAGATGGCGAGAGAGCTCTCTAAAAGGTCCAGGTCCTATTCGGACTTGGTGTTaGCCAGTGGGCACACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: AALGDKRWRESSLKGPGPIRTWC*PVGTHS Trigger: GGAATGTGTGCCCACTGGGCAACACCAAGTCCGAAT...AGGACCTGGACCTTTTAGAGAGCTCTCTCGCCATCTTTTATCTCCCAGAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATTGGGACACAGGGGCCTaGGTGCGAGCCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVFHLFYQSVSVCVCHSYWDTGA*VRASCS Trigger: GCTGCAGCTGGCTCGCACCCAGGCCCCTGTGTCCCA...ATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAAGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTGAGGGGAGACAGCCAGCCAGAAGATGCTCACTTGACCAGGGTGGTTAAGGGTCTGCATTCACATTaGCTGTGTTCTTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVRGDSQPEDAHLTRVVKGLHSH*LCSSRD Trigger: GTCCCTGGAAGAACACAGCCAATGTGAATGCAGACC...CTTAACCACCCTGGTCAAGTGAGCATCTTCTGGCTGGCTGTCTCCCCTCACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGGGGGCTGGGGACGGTGGTaGGGTATGGCAACCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRTQIPLLVEVWGFHSEGGWGRW*GMATLS Trigger: AGACAGGGTTGCCATACCCCACCACCGTCCCCAGCC...CCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR GCA 90 bp | CATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGTTGACGGCGCTGGGTaGAAGGCGGGCAGAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: HNRTQIPLLVEVWGFHSEVDGAG*KAGRGS Trigger: GGATCCTCTGCCCGCCTTGCACCCAGCGCCGTCAAC...CTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | CATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGCACCACCACCTCCCTaGGCTGGCATGTGGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: HNRTQIPLLVEVWGFHSEAPPPP*AGMWHV Trigger: CACGTGCCACATGCCAGCCCAGGGAGGTGGTGGTGC...CTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCTGGGAGATAAAAGATGGCGAGAGAGCTCTCTAAAAGGTCCAGGTCCTGGTCTGCATTCACATTaGCTGTGTTCTTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AALGDKRWRESSLKGPGPGLHSH*LCSSRD Trigger: GTCCCTGGAAGAACACAGCCAATGTGAATGCAGACC...AGGACCTGGACCTTTTAGAGAGCTCTCTCGCCATCTTTTATCTCCCAGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR TCA 90 bp | AACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGGGCTGGAGTGGGATGGATaGTGTCAGCTGGGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NRTQIPLLVEVWGFHSEGLEWDG*CQLGRM Trigger: CATCCTCCCCAGCTGACATCATCCATCCCACTCCAG...CCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR GCA 90 bp | AGTGTCTTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATCAGCCACCACAGCGCTaGACAGTCACACAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVFHLFYQSVSVCVCHSYQPPQR*TVTQLG Trigger: GCCCAGCTGTGTGACTGTGCAGCGCTGTGGTGGCTG...ATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAAGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | TTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATCATAACGCACCACCACCTCCCTaGGCTGGCATGTGGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHLFYQSVSVCVCHSYHNAPPPP*AGMWHV Trigger: CACGTGCCACATGCCAGCCCAGGGAGGTGGTGGTGC...GTTATGATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | CATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGTCTAAGCCCCGCCCTTaGCAATGGAGGAAGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HNRTQIPLLVEVWGFHSESKPRP*QWRKRR Trigger: CCGCCGCTTCCTCCATTGCCAAGGGCGGGGCTTAGA...CTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130048.8 |
||
| CDS-3UTR GCA 90 bp | CATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGAGCCAGCTGCAGCAGTaGAACAAGCAGCAGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: HNRTQIPLLVEVWGFHSESQLQQ*NKQQAT Trigger: CGTCGCCTGCTGCTTGTTGCACTGCTGCAGCTGGCT...CTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR TCA 90 bp | TTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATCATAACTACAGGTGTCTGGGTTaGGCTCTAAGCCCCGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FHLFYQSVSVCVCHSYHNYRCLG*ALSPAL Trigger: AAGGGCGGGGCTTAGAGCTCAACCCAGACACCTGTA...GTTATGATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGGGTATGGCAACCCTGTCTaGCTTCACAGCACTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRTQIPLLVEVWGFHSEGYGNPV*LHSTLL Trigger: AAGGAGAGTGCTGTGAAGCCAGACAGGGTTGCCATA...CCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR CCA 90 bp | CATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGACCACTTTCTTCTGGTaGCTGGGGCCATCAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HNRTQIPLLVEVWGFHSETTFFW*LGPSNW Trigger: CCAGTTTGATGGCCCCAGCCACCAGAAGAAAGTGGT...CTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | TTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATCATAACACCACTTTCTTCTGGTaGCTGGGGCCATCAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHLFYQSVSVCVCHSYHNTTFFW*LGPSNW Trigger: CCAGTTTGATGGCCCCAGCCACCAGAAGAAAGTGGT...GTTATGATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGGGATAAACGTCTATCCATaGCACCACTTTCTTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTQIPLLVEVWGFHSEGINVYP*HHFLLV Trigger: CACCAGAAGAAAGTGGTGCCATGGATAGACGTTTAT...CCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS GCA 90 bp | AGCGGCAGCGGCAGGTCCGGGGGTCAGGGCGTTGACGGCGCTGGGTaGAAGGCGGGCAGAGGATCCTGGGGCTGTCTGGCTTCACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGSGRSGGQGVDGAG*KAGRGSWGCLASQH Trigger: GTGCTGTGAAGCCAGACAGCCCCAGGATCCTCTGCCCGCCTTGCACCCAGCGCCGTCAACGCCCTGACCCCCGGACCTGCCGCTGCCGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130048.8 |
||
| CDS CCA 90 bp | GCGGGCAGAGGATCCTGGGGCTGGAGTGGGATGGATGATGTCAGCTaGGGAGGATGCTCCCGGGGTAGAGTCCCAGCCCGGAACAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGRGSWGWSGMDDVS*GGCSRGRVPARNRA Trigger: CGCTCTGTTCCGGGCTGGGACTCTACCCCGGGAGCATCCTCCCCAGCTGACATCATCCATCCCACTCCAGCCCCAGGATCCTCTGCCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS CCA 90 bp | GGTCAGGGCGTTGACGGCGCTGGGTGCAAGGCGGGCAGAGGATCCTaGGGCTGGAGTGGGATGGATGATGTCAGCTGGGGAGGATGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQGVDGAGCKAGRGS*GWSGMDDVSWGGCS Trigger: GGAGCATCCTCCCCAGCTGACATCATCCATCCCACTCCAGCCCCAGGATCCTCTGCCCGCCTTGCACCCAGCGCCGTCAACGCCCTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR CAA 90 bp | CGTGGAGTCTGGAAAGCAGCTTGTCACTTTCGCGGCTTCCGGCACCTACAGGTGCCGGGGGTCAGGGCGTaGACGGCGCTGGGTGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGVWKAACHFRGFRHLQVPGVRA*TALGAR Trigger: CCTTGCACCCAGCGCCGTCAACGCCCTGACCCCCGG...CACCTGTAGGTGCCGGAAGCCGCGAAAGTGACAAGCTGCTTTCCAGACTCCACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS CCA 90 bp | ACTTTCTTCTGGTGGCTGGGGCCATCAAACTGGGACACAGGGGCCTaGGTGCGAGCCAGCTGCAGCAGTGCAACAAGCAGCAGGCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: TFFWWLGPSNWDTGA*VRASCSSATSSRRR Trigger: CCGTCGCCTGCTGCTTGTTGCACTGCTGCAGCTGGCTCGCACCCAGGCCCCTGTGTCCCAGTTTGATGGCCCCAGCCACCAGAAGAAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTCCACTCTTCTCCCTGTGAAGCAGGGCCATAAAAGCAGCCGGGCCCGTCTACAGGTGTCTGGGTaGAGCTCTAAGCCCCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCSTLLPVKQGHKSSRARLQVSG*SSKPRP Trigger: AGGGCGGGGCTTAGAGCTCAACCCAGACACCTGTAG...ACGGGCCCGGCTGCTTTTATGGCCCTGCTTCACAGGGAGAAGAGTGGAGCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130048.8 |
||
| CDS GCA 90 bp | GGCACACATTCCAGGCCATCGTCAGGGCAGCAGCCACCACAGCGCTaGACAGTCACACAGCTGGGCACTAGTTGTTTGACCACATTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTHSRPSSGQQPPQR*TVTQLGTSCLTTLP Trigger: GGGCAATGTGGTCAAACAACTAGTGCCCAGCTGTGTGACTGTGCAGCGCTGTGGTGGCTGCTGCCCTGACGATGGCCTGGAATGTGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGGCCCGTGGAGTCTGGAAAGCAGCTTGTCACTTTCGCGGCTTCCGGCACCTGGTCTGCATTCACATaGGCTGTGTTCTTCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AGPVESGKQLVTFAASGTWSAFT*AVFFQG Trigger: TCCCTGGAAGAACACAGCCAATGTGAATGCAGACCA...GGTGCCGGAAGCCGCGAAAGTGACAAGCTGCTTTCCAGACTCCACGGGCCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS GCA 90 bp | CATGCTCAGAGGCACCACCACCTCCCTGGGCTGGCATGTGGCACGTaGATAAACGTCTATCCATGGCACCACTTTCTTCTGGTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HAQRHHHLPGLACGT*INVYPWHHFLLVAG Trigger: CCCAGCCACCAGAAGAAAGTGGTGCCATGGATAGACGTTTATGCACGTGCCACATGCCAGCCCAGGGAGGTGGTGGTGCCTCTGAGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGCTTGTCACTTTCGCGGCTTCCGGCACCTACAGGTGTCTGGGTTGAGCGATCTGCATTCGGACTaGGTGTTGCCCAGTGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KAACHFRGFRHLQVSGLSDLHSD*VLPSGH Trigger: GTGCCCACTGGGCAACACCAAGTCCGAATGCAGATC...GCTCAACCCAGACACCTGTAGGTGCCGGAAGCCGCGAAAGTGACAAGCTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR CAA 90 bp | AACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGGGGCCGGGGGTCAGGGCGTaGACGGCGCTGGGTGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NRTQIPLLVEVWGFHSEGPGVRA*TALGAR Trigger: CCTTGCACCCAGCGCCGTCAACGCCCTGACCCCCGG...CCCCTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS TCA 90 bp | CTGCATTCACATTGGCTGTGTTCTTCCAGGGACATCTCCCCCAGCTaGCTGCTCGGGTACTGGATCATGAGGATCTGCATTCGGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHSHWLCSSRDISPS*LLGYWIMRICIRTW Trigger: CCAAGTCCGAATGCAGATCCTCATGATCCAGTACCCGAGCAGTCAGCTGGGGGAGATGTCCCTGGAAGAACACAGCCAATGTGAATGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CAA 90 bp | GGCCATAAAAGCAGCCGGGCCCGTGGAGTCTGGAAAGCAGCTTGTCACTTTCGCAGTTGTTTGACCACATaGCCCATGAGTTCCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHKSSRARGVWKAACHFRSCLTT*PMSSML Trigger: GAGCATGGAACTCATGGGCAATGTGGTCAAACAACT...GCGAAAGTGACAAGCTGCTTTCCAGACTCCACGGGCCCGGCTGCTTTTATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS-3UTR CAA 90 bp | GCAGCTCTGGGAGATAAAAGATGGCGAGAGAGCTCTCTAAAAGGTCCAGGTCCTTGGTCTGCATTCACATaGGCTGTGTTCTTCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AALGDKRWRESSLKGPGPWSAFT*AVFFQG Trigger: TCCCTGGAAGAACACAGCCAATGTGAATGCAGACCA...AGGACCTGGACCTTTTAGAGAGCTCTCTCGCCATCTTTTATCTCCCAGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCCTTGACAATTGTTAGATGGCAGCTCTGGGAGATAAAAGATGGCGAGAGACATTCGGACTTGGTGTaGCCCAGTGGGCACACATTC | + |
|
Preference number: 5 (lower is better) Translates to: GSLTIVRWQLWEIKDGERHSDLV*PSGHTF Trigger: GAATGTGTGCCCACTGGGCAACACCAAGTCCGAATG...TCTCTCGCCATCTTTTATCTCCCAGAGCTGCCATCTAACAATTGTCAAGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CAA 90 bp | TTCCATCTCTTTTATCAGAGTGTGAGTGTGTGTGTGTGTCACAGTTATCATAACCATTCGGACTTGGTGTaGCCCAGTGGGCACACATTC | + |
|
Preference number: 5 (lower is better) Translates to: FHLFYQSVSVCVCHSYHNHSDLV*PSGHTF Trigger: GAATGTGTGCCCACTGGGCAACACCAAGTCCGAATG...GTTATGATAACTGTGACACACACACACACTCACACTCTGATAAAAGAGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS-3UTR CAA 90 bp | CATAACAGAACCCAAATCCCGTTATTGGTAGAAGTTTGGGGTTTTCATAGTGAGAGTTGTTTGACCACATaGCCCATGAGTTCCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HNRTQIPLLVEVWGFHSESCLTT*PMSSML Trigger: GAGCATGGAACTCATGGGCAATGTGGTCAAACAACT...CTCACTATGAAAACCCCAAACTTCTACCAATAACGGGATTTGGGTTCTGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS GCA 72 bp | GGCAGGTCCGGGGGTCAGGGCGTTGACGGCGCTGGGTaGAAGGCGGGCAGAGGATCCTGGGGCTGGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRSGGQGVDGAG*KAGRGSWGWSG Trigger: CCCACTCCAGCCCCAGGATCCTCTGCCCGCCTTGCACCCAGCGCCGTCAACGCCCTGACCCCCGGACCTGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS GCA 72 bp | AGCCCCGCCCTTGGCAATGGAGGAAGCGGCGGCGTCTaGAGCGGCAGCGGCAGGTCCGGGGGTCAGGGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPALGNGGSGGV*SGSGRSGGQGV Trigger: AACGCCCTGACCCCCGGACCTGCCGCTGCCGCTGCAGACGCCGCCGCTTCCTCCATTGCCAAGGGCGGGGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS CCA 72 bp | TCCCAGCCCGGAACAGAGCGGGGCTGGGGACGGTGGTaGGGTATGGCAACCCTGTCTGGCTTCACAGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SQPGTERGWGRW*GMATLSGFTAL Trigger: GAGTGCTGTGAAGCCAGACAGGGTTGCCATACCCCACCACCGTCCCCAGCCCCGCTCTGTTCCGGGCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS CCA 72 bp | GGATCCTGGGGCTGGAGTGGGATGGATGATGTCAGCTaGGGAGGATGCTCCCGGGGTAGAGTCCCAGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSWGWSGMDDVS*GGCSRGRVPAR Trigger: CCGGGCTGGGACTCTACCCCGGGAGCATCCTCCCCAGCTGACATCATCCATCCCACTCCAGCCCCAGGATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS GCA 72 bp | GGCTGGAGTGGGATGGATGATGTCAGCTGGGGAGGATaGTCCCGGGGTAGAGTCCCAGCCCGGAACAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GWSGMDDVSWGG*SRGRVPARNRA Trigger: CGCTCTGTTCCGGGCTGGGACTCTACCCCGGGAGCATCCTCCCCAGCTGACATCATCCATCCCACTCCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS CCA 72 bp | GTTGACGGCGCTGGGTGCAAGGCGGGCAGAGGATCCTaGGGCTGGAGTGGGATGGATGATGTCAGCTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VDGAGCKAGRGS*GWSGMDDVSWG Trigger: TCCCCAGCTGACATCATCCATCCCACTCCAGCCCCAGGATCCTCTGCCCGCCTTGCACCCAGCGCCGTCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025914.7 |
||
| CDS CCA 72 bp | CTACAGGTGTCTGGGTTGAGCTCTAAGCCCCGCCCTTaGCAATGGAGGAAGCGGCGGCGTCTGCAGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQVSGLSSKPRP*QWRKRRRLQRQ Trigger: CTGCCGCTGCAGACGCCGCCGCTTCCTCCATTGCCAAGGGCGGGGCTTAGAGCTCAACCCAGACACCTGTAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130048.8 |
||
| CDS GCA 72 bp | TCCAGGCCATCGTCAGGGCAGCAGCCACCACAGCGCTaGACAGTCACACAGCTGGGCACTAGTTGTTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SRPSSGQQPPQR*TVTQLGTSCLT Trigger: GGTCAAACAACTAGTGCCCAGCTGTGTGACTGTGCAGCGCTGTGGTGGCTGCTGCCCTGACGATGGCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS CAA 72 bp | CACTTTCGCGGCTTCCGGCACCTACAGGTGTCTGGGTaGAGCTCTAAGCCCCGCCCTTGGCAATGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HFRGFRHLQVSG*SSKPRPWQWRK Trigger: CTTCCTCCATTGCCAAGGGCGGGGCTTAGAGCTCAACCCAGACACCTGTAGGTGCCGGAAGCCGCGAAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130048.8 |
||
| CDS CAA 90 bp | CAGCGCTGCACAGTCACACAGCTGGGCACTAGTTGTTTGACCACATaGCCCATGAGTTCCATGCTCAGAGGCACCACCACCTCCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRCTVTQLGTSCLTT*PMSSMLRGTTTSLG Trigger: GCCCAGGGAGGTGGTGGTGCCTCTGAGCATGGAACTCATGGGCAATGTGGTCAAACAACTAGTGCCCAGCTGTGTGACTGTGCAGCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS CAA 90 bp | CAGCCACCACAGCGCTGCACAGTCACACAGCTGGGCACTAGTTGTTaGACCACATTGCCCATGAGTTCCATGCTCAGAGGCACCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: QPPQRCTVTQLGTSC*TTLPMSSMLRGTTT Trigger: GGTGGTGGTGCCTCTGAGCATGGAACTCATGGGCAATGTGGTCAAACAACTAGTGCCCAGCTGTGTGACTGTGCAGCGCTGTGGTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS CCA 72 bp | AAACGTCTATCCATGGCACCACTTTCTTCTGGTGGCTaGGGCCATCAAACTGGGACACAGGGGCCTGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KRLSMAPLSSGG*GHQTGTQGPGC Trigger: GCACCCAGGCCCCTGTGTCCCAGTTTGATGGCCCCAGCCACCAGAAGAAAGTGGTGCCATGGATAGACGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS CAA 72 bp | CAGCGCTGCACAGTCACACAGCTGGGCACTAGTTGTTaGACCACATTGCCCATGAGTTCCATGCTCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRCTVTQLGTSC*TTLPMSSMLRG Trigger: GCCTCTGAGCATGGAACTCATGGGCAATGTGGTCAAACAACTAGTGCCCAGCTGTGTGACTGTGCAGCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||
| CDS TCA 72 bp | CATTGGCTGTGTTCTTCCAGGGACATCTCCCCCAGCTaGCTGCTCGGGTACTGGATCATGAGGATCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: HWLCSSRDISPS*LLGYWIMRICI Trigger: AATGCAGATCCTCATGATCCAGTACCCGAGCAGTCAGCTGGGGGAGATGTCCCTGGAAGAACACAGCCAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025914.7 ENSMUST00000130048.8 |
||