Pregenerated sensors for VEGFA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023951Ensembl transcript IDs: ENSMUST00000024747.14, ENSMUST00000071648.12, ENSMUST00000113519.2, ENSMUST00000113520.8, ENSMUST00000142351.9
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGCCTCCTAGGCCCCTCAGAAGTGGAGGAGCGAGCTGAAGGCTaGCCAGGCTCCCGATTCTTCCAGGCAGTGCCCAGAGGGGCGGGG | + |
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Preference number: 1 (lower is better) Translates to: GGLLGPSEVEERAEG*PGSRFFQAVPRGAG Trigger: CCCCGCCCCTCTGGGCACTGCCTGGAAGAATCGGGAGCCTGGCCAGCCTTCAGCTCGCTCCTCCACTTCTGAGGGGCCTAGGAGGCCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR TCA 90 bp | ACCTGTGGGAGGCCTCCTAGGCCCCTCAGAAGTGGAGGAGCGAGCTaGAGGCTGGCCAGGCTCCCGATTCTTCCAGGCAGTGCCCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: TCGRPPRPLRSGGAS*RLARLPILPGSAQR Trigger: CCTCTGGGCACTGCCTGGAAGAATCGGGAGCCTGGCCAGCCTTCAGCTCGCTCCTCCACTTCTGAGGGGCCTAGGAGGCCTCCCACAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR GCA 90 bp | AGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTaGCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: SPTRDRAWSPARECV*RSLALRTQSAPRRV Trigger: GACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR GCA 90 bp | GAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATaGGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCCTCGA | + |
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Preference number: 1 (lower is better) Translates to: ESSPTRDRAWSPARE*VCRSLALRTQSAPR Trigger: TCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR GCA 90 bp | AGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTaGCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: RKWRIQSHEGPCLVT*PGMRLPESRPPDPK Trigger: CTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR CCA 90 bp | GCCTCCGTGAGGGGCTTGCGGGTCCTGCCCCATTGCTCTGTGCCTTaGGAAGGGAAGATGAGGAAGGGTAAGCCACTCACACACACAGCC | + |
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Preference number: 1 (lower is better) Translates to: ASVRGLRVLPHCSVP*EGKMRKGKPLTHTA Trigger: GGCTGTGTGTGTGAGTGGCTTACCCTTCCTCATCTTCCCTTCCCAAGGCACAGAGCAATGGGGCAGGACCCGCAAGCCCCTCACGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR TCA 90 bp | CCTCTTGACTCAGGGCCAGGAATGGGTTTGTCGTGTTTCTGGAAGTaGGCCAATGTGCCCCCGTGCCCTGGCCTTGCTTGCTCCCCGGCA | + |
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Preference number: 1 (lower is better) Translates to: PLDSGPGMGLSCFWK*ANVPPCPGLACSPA Trigger: TGCCGGGGAGCAAGCAAGGCCAGGGCACGGGGGCACATTGGCTCACTTCCAGAAACACGACAAACCCATTCCTGGCCCTGAGTCAAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR GCA 90 bp | TGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTaGTCCTCGAAGAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: CPGMRLPESRPPDPK*SSKSLLFLHVRLSG Trigger: TCCAGAAAGCCTGACATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR GCA 90 bp | GCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTaGTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCT | + |
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Preference number: 1 (lower is better) Translates to: AADIRKWRIQSHEGP*LVTCPGMRLPESRP Trigger: AGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR CCA 90 bp | AAGGACTGTTCTGTCAACGGTGACGATGATGGCGTGGTGGTGACATaGTTAATCGGTCTTTCCGGTGAGAGGTCTGGTTCCCGAAACCCT | + |
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Preference number: 1 (lower is better) Translates to: KDCSVNGDDDGVVVT*LIGLSGERSGSRNP Trigger: AGGGTTTCGGGAACCAGACCTCTCACCGGAAAGACCGATTAACCATGTCACCACCACGCCATCATCGTCACCGTTGACAGAACAGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR TCA 90 bp | ACACTGAAGCCTTTCATCCCATTGTCTCCCGTGTCGGCATCCGAGTaGGGACATCCTCCTCCCAACACAAGTCCACAGCAGTCAAACATA | + |
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Preference number: 1 (lower is better) Translates to: TLKPFIPLSPVSASE*GHPPPNTSPQQSNI Trigger: TATGTTTGACTGCTGTGGACTTGTGTTGGGAGGAGGATGTCCTCACTCGGATGCCGACACGGGAGACAATGGGATGAAAGGCTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR CCA 90 bp | AAAGTGCTCCTCGAAGAGTCTCCTCTTCCTTCATGTCAGGCTTTCTaGATTAAGGACTGTTCTGTCAACGGTGACGATGATGGCGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: KVLLEESPLPSCQAF*IKDCSVNGDDDGVV Trigger: CACCACGCCATCATCGTCACCGTTGACAGAACAGTCCTTAATCCAGAAAGCCTGACATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR CCA 90 bp | GGTGTGTCTACAGGAATCCCAGAAACAACCCTAATCTTCCGGGCTTaGCGATTTAGCAGCAGATATAAGAAAATGGCGAATCCAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GVSTGIPETTLIFRA*RFSSRYKKMANPVP Trigger: TGGGACTGGATTCGCCATTTTCTTATATCTGCTGCTAAATCGCCAAGCCCGGAAGATTAGGGTTGTTTCTGGGATTCCTGTAGACACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR CCA 90 bp | TCTCAGGACAAGCTAGTGACTGTCACCGATCTGGGAGAGAGAGATTaGAAACACAGATTTCATACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: SQDKLVTVTDLGERD*KHRFHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTATGAAATCTGTGTTTCCAATCTCTCTCTCCCAGATCGGTGACAGTCACTAGCTTGTCCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCCCGTGTCGGCATCCGAGTGAGGACATCCTCCTCCCAACACAAGTCCACGCCCGGGAATGCGTCTaGCGGAGTCTCGCCCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: CLPCRHPSEDILLPTQVHARECV*RSLALR Trigger: CCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGC...GTGGACTTGTGTTGGGAGGAGGATGTCCTCACTCGGATGCCGACACGGGAGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR TCA 90 bp | GTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCAATCGGTCTTTCCGGTaGGAGGTCTGGTTCCCGAAA | + |
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Preference number: 2 (lower is better) Translates to: VTCPGMRLPESRPPDPKCNRSFR*EVWFPK Trigger: TTTCGGGAACCAGACCTCTCACCGGAAAGACCGATT...GCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR-3UTR TCA 90 bp | GGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGAATCGGTCTTTCCGGTaGGAGGTCTGGTTCCCGAAA | + |
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Preference number: 2 (lower is better) Translates to: GHLPGNASAGVSPSGPKVNRSFR*EVWFPK Trigger: TTTCGGGAACCAGACCTCTCACCGGAAAGACCGATT...CACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCCCGTGTCGGCATCCGAGTGAGGACATCCTCCTCCCAACACAAGTCCACTCACCTGCCCGGGAATaGGTCTGCCGGAGTCTCGCC | + |
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Preference number: 2 (lower is better) Translates to: CLPCRHPSEDILLPTQVHSPARE*VCRSLA Trigger: GGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGA...GTGGACTTGTGTTGGGAGGAGGATGTCCTCACTCGGATGCCGACACGGGAGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR CAA 90 bp | GCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTaGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: ADIRKWRIQSHEGPC*VTCPGMRLPESRPP Trigger: CGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCGCCCGGGAATGCGTCTaGCGGAGTCTCGCCCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: AADIRKWRIQSHEGPCLVARECV*RSLALR Trigger: CCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGC...GACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR-3UTR TCA 90 bp | CGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTTCATGTCAGGTGGTTCCCGAAACCCTaGGGGAGGCTCCTTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RPPDPKCSSKSLLFLHVRWFPKP*GRLLPA Trigger: TGCAGGAAGGAGCCTCCCTCAGGGTTTCGGGAACCA...CCTGACATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGTGAGCCAATGTGCCCCCGTGCCCTGGCCTTGCTTGCTCCCCGGCAGGTCTCTCAGACCACACTaGAGCCTTTCATCCCATTGT | + |
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Preference number: 2 (lower is better) Translates to: LEVSQCAPVPWPCLLPGRSLRPH*SLSSHC Trigger: ACAATGGGATGAAAGGCTTCAGTGTGGTCTGAGAGA...CCTGCCGGGGAGCAAGCAAGGCCAGGGCACGGGGGCACATTGGCTCACTTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCCCTCCGGACCCAAAGTaGTCCTCGAAGAGTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: AADIRKWRIQSHEGPCLVPPDPK*SSKSLL Trigger: GAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGG...GACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR-3UTR CCA 90 bp | CGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGTCATGTCAGGCTTTCTaGATTAAGGACTGTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RIQSHEGPCLVTCPGMRLSCQAF*IKDCSV Trigger: GACAGAACAGTCCTTAATCCAGAAAGCCTGACATGA...CAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR-3UTR CCA 90 bp | TACCAGGCCTCTTCTTCCACCACCGTGTCTTCTCTTGCCGGGACACCTGTGGGACTAATCTTCCGGGCTTaGCGATTTAGCAGCAGATAT | + |
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Preference number: 2 (lower is better) Translates to: YQASSSTTVSSLAGTPVGLIFRA*RFSSRY Trigger: ATATCTGCTGCTAAATCGCCAAGCCCGGAAGATTAG...TCCCACAGGTGTCCCGGCAAGAGAAGACACGGTGGTGGAAGAAGAGGCCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR TCA 90 bp | AGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGAATCGGTCTTTCCGGTaGGAGGTCTGGTTCCCGAAA | + |
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Preference number: 2 (lower is better) Translates to: RYKKMANPVPRGTVLGHLNRSFR*EVWFPK Trigger: TTTCGGGAACCAGACCTCTCACCGGAAAGACCGATT...CAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR-3UTR TCA 90 bp | CATGGGGATCCACAAAGCATGCCATGTCCTGAGGCTCCCCAAACTTCTGGTTGGTCTCTCAGACCACACTaGAGCCTTTCATCCCATTGT | + |
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Preference number: 2 (lower is better) Translates to: HGDPQSMPCPEAPQTSGWSLRPH*SLSSHC Trigger: ACAATGGGATGAAAGGCTTCAGTGTGGTCTGAGAGA...CCAACCAGAAGTTTGGGGAGCCTCAGGACATGGCATGCTTTGTGGATCCCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR CCA 90 bp | CCATTACCAGGCCTCTTCTTCCACCACCGTGTCTTCTCTTGCCGGGACACCTGTGCAGATATAAGAAAATaGCGAATCCAGTCCCACGAG | + |
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Preference number: 2 (lower is better) Translates to: PLPGLFFHHRVFSCRDTCADIRK*RIQSHE Trigger: CTCGTGGGACTGGATTCGCCATTTTCTTATATCTGC...ACAGGTGTCCCGGCAAGAGAAGACACGGTGGTGGAAGAAGAGGCCTGGTAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR TCA 90 bp | GATTGGAAACACAGATTTCATACACACACACACACACACACACACACACACACATGGTTCCCGAAACCCTaGGGGAGGCTCCTTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: DWKHRFHTHTHTHTHTHTWFPKP*GRLLPA Trigger: TGCAGGAAGGAGCCTCCCTCAGGGTTTCGGGAACCA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAAATCTGTGTTTCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACAAGCTAGTGACTGTCACCGATCTGGGAGAGAGAGATTGGAAACACAGCATTGCTCTGTGCCTTaGGAAGGGAAGATGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SGQASDCHRSGRERLETQHCSVP*EGKMRK Trigger: CTTCCTCATCTTCCCTTCCCAAGGCACAGAGCAATG...CTGTGTTTCCAATCTCTCTCTCCCAGATCGGTGACAGTCACTAGCTTGTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGGTGGGTGTGTCTACAGGAATCCCAGAAACAACCCTAATCTTCCGGGCTTCATGTCAGGCTTTCTaGATTAAGGACTGTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: MWVGVSTGIPETTLIFRASCQAF*IKDCSV Trigger: GACAGAACAGTCCTTAATCCAGAAAGCCTGACATGA...AGCCCGGAAGATTAGGGTTGTTTCTGGGATTCCTGTAGACACACCCACCCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR GCA 72 bp | CCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATaGGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: PTRDRAWSPARE*VCRSLALRTQS Trigger: ACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR GCA 72 bp | CGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTaGCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCG | + |
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Preference number: 3 (lower is better) Translates to: RIQSHEGPCLVT*PGMRLPESRPP Trigger: CGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR GCA 72 bp | AGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTaGCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: RDRAWSPARECV*RSLALRTQSAP Trigger: AGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR CCA 72 bp | CTAGGCCCCTCAGAAGTGGAGGAGCGAGCTGAAGGCTaGCCAGGCTCCCGATTCTTCCAGGCAGTGCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LGPSEVEERAEG*PGSRFFQAVPR Trigger: TCTGGGCACTGCCTGGAAGAATCGGGAGCCTGGCCAGCCTTCAGCTCGCTCCTCCACTTCTGAGGGGCCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR GCA 72 bp | TTACCAGGCCTCTTCTTCCACCACCGTGTCTTCTCTTaGCGGGACACCTGTGGGAGGCCTCCTAGGCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LPGLFFHHRVFS*RDTCGRPPRPL Trigger: GAGGGGCCTAGGAGGCCTCCCACAGGTGTCCCGGCAAGAGAAGACACGGTGGTGGAAGAAGAGGCCTGGTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR CCA 72 bp | GAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTaGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: ENGESSPTRDRA*SPARECVCRSL Trigger: GAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR CCA 72 bp | GATCACACAAGGTCCTCCTGGGCTGTACCCAGGAGGTaGGGTAAGGAGAGGACGAAGGGGTCCCAGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: DHTRSSWAVPRR*GKERTKGSQEE Trigger: CTCCTCCTGGGACCCCTTCGTCCTCTCCTTACCCCACCTCCTGGGTACAGCCCAGGAGGACCTTGTGTGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR GCA 72 bp | GAATGGGTTTGTCGTGTTTCTGGAAGTGAGCCAATGTaGCCCCGTGCCCTGGCCTTGCTTGCTCCCCGGCAG | + |
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Preference number: 3 (lower is better) Translates to: EWVCRVSGSEPM*PRALALLAPRQ Trigger: CTGCCGGGGAGCAAGCAAGGCCAGGGCACGGGGGCACATTGGCTCACTTCCAGAAACACGACAAACCCATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR CAA 90 bp | CATGGGGATCCACAAAGCATGCCATGTCCTGAGGCTCCCCAAACTTCTGGTTGGCACGAGGGACCGTGCTaGGTCACCTGCCCGGGAATG | + |
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Preference number: 3 (lower is better) Translates to: HGDPQSMPCPEAPQTSGWHEGPC*VTCPGM Trigger: CATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTG...CCAACCAGAAGTTTGGGGAGCCTCAGGACATGGCATGCTTTGTGGATCCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCTCCTAGGCCCCTCAGAAGTGGAGGAGCGAGCTGAAGGCTGGCCAGGCTCCCCAAACTTCTGGTaGGAACCGGCATCTTTATCT | + |
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Preference number: 3 (lower is better) Translates to: GGLLGPSEVEERAEGWPGSPNFW*EPASLS Trigger: AGATAAAGATGCCGGTTCCAACCAGAAGTTTGGGGA...GCCTGGCCAGCCTTCAGCTCGCTCCTCCACTTCTGAGGGGCCTAGGAGGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR TCA 72 bp | TCAGGGCCAGGAATGGGTTTGTCGTGTTTCTGGAAGTaGGCCAATGTGCCCCCGTGCCCTGGCCTTGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SGPGMGLSCFWK*ANVPPCPGLAC Trigger: GCAAGCAAGGCCAGGGCACGGGGGCACATTGGCTCACTTCCAGAAACACGACAAACCCATTCCTGGCCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
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| 3UTR GCA 72 bp | ATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTaGTCCTCGAAGAGTCTCCTCTTCCTTCATGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: MRLPESRPPDPK*SSKSLLFLHVR Trigger: CCTGACATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
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| 3UTR GCA 72 bp | ATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTaGTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IRKWRIQSHEGP*LVTCPGMRLPE Trigger: CTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCATGGGGATCCACAAAGCATGCCATGTCCTGAGGCTCCCCAAACTTCTGGTGTGCCCTGGCCTTGCTaGCTCCCCGGCAGGCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YHGDPQSMPCPEAPQTSGVPWPC*LPGRQK Trigger: CTTTTGCCTGCCGGGGAGCAAGCAAGGCCAGGGCAC...ACCAGAAGTTTGGGGAGCCTCAGGACATGGCATGCTTTGTGGATCCCCATGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| 3UTR TCA 72 bp | CCTTTCATCCCATTGTCTCCCGTGTCGGCATCCGAGTaGGGACATCCTCCTCCCAACACAAGTCCACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PFIPLSPVSASE*GHPPPNTSPQQ Trigger: CTGCTGTGGACTTGTGTTGGGAGGAGGATGTCCTCACTCGGATGCCGACACGGGAGACAATGGGATGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| 3UTR TCA 72 bp | GCAGGCAAAAGGACTTCGGCCTCTCTCAGACCACACTaGAGCCTTTCATCCCATTGTCTCCCGTGTCGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: AGKRTSASLRPH*SLSSHCLPCRH Trigger: ATGCCGACACGGGAGACAATGGGATGAAAGGCTTCAGTGTGGTCTGAGAGAGGCCGAAGTCCTTTTGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| 3UTR CCA 72 bp | TCCGGGCTTGGCGATTTAGCAGCAGATATAAGAAAATaGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SGLGDLAADIRK*RIQSHEGPCLV Trigger: GACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGCTAAATCGCCAAGCCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| 3UTR TCA 72 bp | AGACTATCATGGGGATCCACAAAGCATGCCATGTCCTaGGGCTCCCCAAACTTCTGGTTGGAACCGGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: RLSWGSTKHAMS*GSPNFWLEPAS Trigger: AGATGCCGGTTCCAACCAGAAGTTTGGGGAGCCTCAGGACATGGCATGCTTTGTGGATCCCCATGATAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| 3UTR TCA 72 bp | AGTCTCCTGGGGACAGAATTAGTGGTTTCAATGGTCTaGTCACACAAGGTCCTCCTGGGCTGTACCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLLGTELVVSMV*SHKVLLGCTQE Trigger: CTCCTGGGTACAGCCCAGGAGGACCTTGTGTGATCAGACCATTGAAACCACTAATTCTGTCCCCAGGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| 3UTR CCA 72 bp | AGCATGCCATGTCCTGAGGCTCCCCAAACTTCTGGTTaGAACCGGCATCTTTATCTCTTTCTCTGTCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: SMPCPEAPQTSG*NRHLYLFLCHH Trigger: ATGATGACAGAGAAAGAGATAAAGATGCCGGTTCCAACCAGAAGTTTGGGGAGCCTCAGGACATGGCATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| 3UTR CCA 72 bp | ACAGGAATCCCAGAAACAACCCTAATCTTCCGGGCTTaGCGATTTAGCAGCAGATATAAGAAAATGGCGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGIPETTLIFRA*RFSSRYKKMAN Trigger: ATTCGCCATTTTCTTATATCTGCTGCTAAATCGCCAAGCCCGGAAGATTAGGGTTGTTTCTGGGATTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | CGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCGGTGGGCGCTGGGGCTaGGGGCGGTGTCTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RAWSPARECVCRSLALRTGGRWG*GRCLSV Trigger: GACAGACAGACACCGCCCCCAGCCCCAGCGCCCACC...GGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAGAGCCGAGCGCCCACTaGGGCCCCCTCTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AWSPARECVCRSLALRTQEPSAH*GPLSSS Trigger: GGAAGAGGAGAGGGGGCCGCAGTGGGCGCTCGGCTC...TTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | ATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGGTGGGCGCTGGGGCTaGGGGCGGTGTCTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQSHEGPCLVTCPGMRLPGGRWG*GRCLSV Trigger: GACAGACAGACACCGCCCCCAGCCCCAGCGCCCACC...CGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | CGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCGAGGAGGTGGGCGCTaGGGCTGGGGGCGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIQSHEGPCLVTCPGMRLRGGGR*GWGRCL Trigger: CAGACACCGCCCCCAGCCCCAGCGCCCACCTCCTCG...CAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | CGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGGGCGCGCGCGCGGCTaGAGCACTGTCTGCGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RECVCRSLALRTQSAPRRGRARG*STVCAH Trigger: GTGTGCGCAGACAGTGCTCCAGCCGCGCGCGCGCCC...TCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | TCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCTCTCCGGCTCGGACTaGGAGGCAGCCCGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPARECVCRSLALRTQSALSGSD*EAARSL Trigger: AAGAGAGCGGGCTGCCTCGCAGTCCGAGCCGGAGAG...AGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | GCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTGGCTCCTCTCCCTTCTaGAACCGAGGCCCGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGVSPSGPKVLLEESPLPGSSPF*NRGPGR Trigger: CCGGCCCGGGCCTCGGTTCCAGAAGGGAGAGGAGCC...AGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGACGAAAAGTTTCCGTaGAATCCCGCGAGCCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTVLGHLPGNASAGVSPSDEKFP*NPASPD Trigger: GTCGGGGCTCGCGGGATTGCACGGAAACTTTTCGTC...GGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTCTCTCCGGCTCGGACTaGGAGGCAGCCCGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGVSPSGPKVLLEESPLPLSGSD*EAARSL Trigger: AAGAGAGCGGGCTGCCTCGCAGTCCGAGCCGGAGAG...AGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | CGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGGTCGTGGGTGCAGCCTaGGACCACTTGGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIQSHEGPCLVTCPGMRLVVGAA*DHLAWW Trigger: CCACCATGCCAAGTGGTCCCAGGCTGCACCCACGAC...CAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | TCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTGACGAAAAGTTTCCGTaGAATCCCGCGAGCCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPARECVCRSLALRTQSADEKFP*NPASPD Trigger: GTCGGGGCTCGCGGGATTGCACGGAAACTTTTCGTC...AGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCCAAGCTGCCTCGCCTTaGAACGCGAGTCTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTVLGHLPGNASAGVSPSQAASP*NASLCF Trigger: AAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTG...GGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | TCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCAGCCTGGGACCACTTaGCATGGTGGAGGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPARECVCRSLALRTQSAQPGTT*HGGGTA Trigger: TGCTGTACCTCCACCATGCCAAGTGGTCCCAGGCTG...AGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | GAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCGCTCTCCTTCTGTCGTaGGTGCAGCCTGGGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: ESSPTRDRAWSPARECVCALLLS*VQPGTT Trigger: AGTGGTCCCAGGCTGCACCCACGACAGAAGGAGAGC...GCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAACAAGCTGCCTCGCCTTaGAACGCGAGTCTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AWSPARECVCRSLALRTQQAASP*NASLCF Trigger: AAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTG...TTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGCCTCCTAGGCCCCTCAGAAGTGGAGGAGCGAGCTGAAGGCTGGCCAGGCGACCACTTGGCATGGTaGAGGTACAGCAGTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLLGPSEVEERAEGWPGDHLAW*RYSSKA Trigger: GGCTTTACTGCTGTACCTCCACCATGCCAAGTGGTC...GCCTGGCCAGCCTTCAGCTCGCTCCTCCACTTCTGAGGGGCCTAGGAGGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| CDS-3UTR CCA 90 bp | ACATGGTTAATCGGTCTTTCCGGTGAGAGGTCTGGTTCCCGAAACCCTGAGGGAGGGCGCGCGCGCGGCTaGAGCACTGTCTGCGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TWLIGLSGERSGSRNPEGGRARG*STVCAH Trigger: GTGTGCGCAGACAGTGCTCCAGCCGCGCGCGCGCCC...TCCCTCAGGGTTTCGGGAACCAGACCTCTCACCGGAAAGACCGATTAACCATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | ATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGAGAGCAGAAAGTTCATaGTTTCGGAGGCCCGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IQSHEGPCLVTCPGMRLPRAESS*FRRPVR Trigger: CCGGACGGGCCTCCGAAACCATGAACTTTCTGCTCT...CGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | GAGCGAGCTGAAGGCTGGCCAGGCTCCCGATTCTTCCAGGCAGTGCCCAGAGGGGACCACTTGGCATGGTaGAGGTACAGCAGTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERAEGWPGSRFFQAVPRGDHLAW*RYSSKA Trigger: GGCTTTACTGCTGTACCTCCACCATGCCAAGTGGTC...CCCTCTGGGCACTGCCTGGAAGAATCGGGAGCCTGGCCAGCCTTCAGCTCGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| 3UTR CAA 72 bp | AGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTaGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKWRIQSHEGPC*VTCPGMRLPES Trigger: AGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGGAGGGGCCATTACCAGGCCTCTTCTTCCACCACCGTGTCTTCTCTTGCCTCCTTCTGTCGTGGGTaGAGCCTGGGACCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRGHYQASSSTTVSSLASFCRG*SLGPLG Trigger: GCCAAGTGGTCCCAGGCTGCACCCACGACAGAAGGA...GGCAAGAGAAGACACGGTGGTGGAAGAAGAGGCCTGGTAATGGCCCCTCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| CDS-3UTR GCA 90 bp | GTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCGTCTGCATTCACATCTaGTGTGCTGTAGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTCPGMRLPESRPPDPKCVCIHI*CAVGSS Trigger: TGAGCTTCCTACAGCACAGCAGATGTGAATGCAGAC...GCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCCGTGTCGGCATCCGAGTGAGGACATCCTCCTCCCAACACAAGTCCACGCTCTCCTTCTGTCGTaGGTGCAGCCTGGGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: CLPCRHPSEDILLPTQVHALLLS*VQPGTT Trigger: AGTGGTCCCAGGCTGCACCCACGACAGAAGGAGAGC...GTGGACTTGTGTTGGGAGGAGGATGTCCTCACTCGGATGCCGACACGGGAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| CDS-3UTR TCA 90 bp | TCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGGAACAAGGCTCACAGTaGTTTTCTGGCTTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPTRDRAWSPARECVCREQGSQ*FSGFVL Trigger: CAGAACAAAGCCAGAAAATCACTGTGAGCCTTGTTC...CCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071648.12 |
||
| CDS-3UTR GCA 90 bp | GTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCCATTCACATCTGCTGTaGTGTAGGAAGCTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTCPGMRLPESRPPDPKCHSHLL*CRKLIS Trigger: AGAGATGAGCTTCCTACAGCACAGCAGATGTGAATG...GCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | TCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTGTCTGCATTCACATCTaGTGTGCTGTAGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPARECVCRSLALRTQSAVCIHI*CAVGSS Trigger: TGAGCTTCCTACAGCACAGCAGATGTGAATGCAGAC...AGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | TTTAGCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTCGAGGAGGTGGGCGCTaGGGCTGGGGGCGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSRYKKMANPVPRGTVLRGGGR*GWGRCL Trigger: CAGACACCGCCCCCAGCCCCAGCGCCCACCTCCTCG...AAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGCTAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | TCCGGGCTTGGCGATTTAGCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGGCTCCTCTCCCTTCTaGAACCGAGGCCCGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLGDLAADIRKWRIQSHGSSPF*NRGPGR Trigger: CCGGCCCGGGCCTCGGTTCCAGAAGGGAGAGGAGCC...GTGGGACTGGATTCGCCATTTTCTTATATCTGCTGCTAAATCGCCAAGCCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | TCCGGGCTTGGCGATTTAGCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGGCTGGAGCACTGTCTaGGCACACGGCCGCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SGLGDLAADIRKWRIQSHGWSTV*AHGRLT Trigger: GGTGAGGCGGCCGTGTGCGCAGACAGTGCTCCAGCC...GTGGGACTGGATTCGCCATTTTCTTATATCTGCTGCTAAATCGCCAAGCCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGAACATTTACACGTCTaGGGATCTTGGACAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTVLGHLPGNASAGVSPSEHLHV*GSWTNK Trigger: TTTGTTTGTCCAAGATCCGCAGACGTGTAAATGTTC...GGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | CGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGGAAGAGCCCAGAAGTTaGACGAAAAGTTTCCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RIQSHEGPCLVTCPGMRLEEPRS*TKSFRA Trigger: TGCACGGAAACTTTTCGTCCAACTTCTGGGCTCTTC...CAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | ACATGGTTAATCGGTCTTTCCGGTGAGAGGTCTGGTTCCCGAAACCCTGAGGGATCCTTCTGTCGTGGGTaGAGCCTGGGACCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWLIGLSGERSGSRNPEGSFCRG*SLGPLG Trigger: GCCAAGTGGTCCCAGGCTGCACCCACGACAGAAGGA...TCCCTCAGGGTTTCGGGAACCAGACCTCTCACCGGAAAGACCGATTAACCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | CGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCATTCACATCTGCTGTaGTGTAGGAAGCTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIQSHEGPCLVTCPGMRLHSHLL*CRKLIS Trigger: AGAGATGAGCTTCCTACAGCACAGCAGATGTGAATG...CAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGTGTCTTTCTTTGGTCTaGATTCACATCTGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQSHEGPCLVTCPGMRLPCLSLV*IHICCA Trigger: AGCACAGCAGATGTGAATGCAGACCAAAGAAAGACA...CGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCATGTCAGGCTTTCTGGATTAAGGACTGTTCTGTCAACGGTGACGATGATGAGCCGAGCGCCCACTaGGGCCCCCTCTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSCQAFWIKDCSVNGDDDEPSAH*GPLSSS Trigger: GGAAGAGGAGAGGGGGCCGCAGTGGGCGCTCGGCTC...ATCATCGTCACCGTTGACAGAACAGTCCTTAATCCAGAAAGCCTGACATGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAATCTTGGACAAACAAATaGTTTCTCCGCTCTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: AWSPARECVCRSLALRTQSWTNK*FLRSEQ Trigger: TTGTTCAGAGCGGAGAAAGCATTTGTTTGTCCAAGA...TTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | AGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGGTCGTGGGTGCAGCCTaGGACCACTTGGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYKKMANPVPRGTVLGHLVVGAA*DHLAWW Trigger: CCACCATGCCAAGTGGTCCCAGGCTGCACCCACGAC...CAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | CGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGCTCTCCTTCTGTCGTaGGTGCAGCCTGGGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: RTQSAPRRVSSSFMSGFLALLLS*VQPGTT Trigger: AGTGGTCCCAGGCTGCACCCACGACAGAAGGAGAGC...CAGAAAGCCTGACATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | GAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCACGTCTGCGGATCTTaGACAAACAAATGCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESSPTRDRAWSPARECVCHVCGS*TNKCFL Trigger: GAGAAAGCATTTGTTTGTCCAAGATCCGCAGACGTG...GCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTTCATAAAGCCAGGGTCCAGTaGACCCAAGAGAGCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESRPPDPKCSSKSLLFLHKARVQ*TQESRK Trigger: CTTTCTGCTCTCTTGGGTGCACTGGACCCTGGCTTT...ATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | CGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTTCATGTCAGGACTTCATGGGACTTCTaGTCTCCTTCTGTCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPPDPKCSSKSLLFLHVRTSWDF*SPSVVG Trigger: ACCCACGACAGAAGGAGAGCAGAAGTCCCATGAAGT...CCTGACATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGATTAAGGACTGTTCTGTCAACGGCTGGAGCACTGTCTaGGCACACGGCCGCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: ESPLPSCQAFWIKDCSVNGWSTV*AHGRLT Trigger: GGTGAGGCGGCCGTGTGCGCAGACAGTGCTCCAGCC...GTTGACAGAACAGTCCTTAATCCAGAAAGCCTGACATGAAGGAAGAGGAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTTGTCTTTCTTTGGTCTaGATTCACATCTGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGVSPSGPKVLLEESPLPCLSLV*IHICCA Trigger: AGCACAGCAGATGTGAATGCAGACCAAAGAAAGACA...AGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | AATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGAACATTTACACGTCTaGGGATCTTGGACAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NPVPRGTVLGHLPGNASAEHLHV*GSWTNK Trigger: TTTGTTTGTCCAAGATCCGCAGACGTGTAAATGTTC...GGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | CATGGGGATCCACAAAGCATGCCATGTCCTGAGGCTCCCCAAACTTCTGGTTGGTCGTTTAACTCAAGCTaGCTCGCCTTGCAACGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HGDPQSMPCPEAPQTSGWSFNSS*LALQRE Trigger: CTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACGA...CCAACCAGAAGTTTGGGGAGCCTCAGGACATGGCATGCTTTGTGGATCCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071648.12 |
||
| CDS-3UTR CCA 90 bp | CGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGACCACTTGGCATGGTaGAGGTACAGCAGTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQSAPRRVSSSFMSGFLDHLAW*RYSSKA Trigger: GGCTTTACTGCTGTACCTCCACCATGCCAAGTGGTC...CAGAAAGCCTGACATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | ACAACCCTAATCTTCCGGGCTTGGCGATTTAGCAGCAGATATAAGAAAATGGCGGTCGTGGGTGCAGCCTaGGACCACTTGGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTLIFRAWRFSSRYKKMAVVGAA*DHLAWW Trigger: CCACCATGCCAAGTGGTCCCAGGCTGCACCCACGAC...CGCCATTTTCTTATATCTGCTGCTAAATCGCCAAGCCCGGAAGATTAGGGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCATGCTTTCTCCGCTCTaGACAAGGCTCACAGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AADIRKWRIQSHEGPCLVMLSPL*TRLTVN Trigger: GTTCACTGTGAGCCTTGTTCAGAGCGGAGAAAGCAT...GACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | ACATGGTTAATCGGTCTTTCCGGTGAGAGGTCTGGTTCCCGAAACCCTGAGGGAACTTCATGGGACTTCTaGTCTCCTTCTGTCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWLIGLSGERSGSRNPEGTSWDF*SPSVVG Trigger: ACCCACGACAGAAGGAGAGCAGAAGTCCCATGAAGT...TCCCTCAGGGTTTCGGGAACCAGACCTCTCACCGGAAAGACCGATTAACCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGGCTTTCTGGATTAAGGACTGTTCTGTCAACGGTGACGATGATGGCGTGGATGTGCTGGCTTTGGTaGGGTTTGATCCGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: VRLSGLRTVLSTVTMMAWMCWLW*GLIRMI Trigger: GATCATGCGGATCAAACCTCACCAAAGCCAGCACAT...CCACGCCATCATCGTCACCGTTGACAGAACAGTCCTTAATCCAGAAAGCCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR TCA 90 bp | AGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGATGTGCTGGCTTTGGTaGGGTTTGATCCGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: RYKKMANPVPRGTVLGHLMCWLW*GLIRMI Trigger: GATCATGCGGATCAAACCTCACCAAAGCCAGCACAT...CAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGACAAGCTAGTGACTGTCACCGATCTGGGAGAGAGAGATTGGAAACACAGAAAGCCAGGGTCCAGTaGACCCAAGAGAGCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGQASDCHRSGRERLETQKARVQ*TQESRK Trigger: CTTTCTGCTCTCTTGGGTGCACTGGACCCTGGCTTT...CTGTGTTTCCAATCTCTCTCTCCCAGATCGGTGACAGTCACTAGCTTGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| CDS-3UTR CCA 90 bp | ACAACCCTAATCTTCCGGGCTTGGCGATTTAGCAGCAGATATAAGAAAATGGCGCAGCCTGGGACCACTTaGCATGGTGGAGGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTLIFRAWRFSSRYKKMAQPGTT*HGGGTA Trigger: TGCTGTACCTCCACCATGCCAAGTGGTCCCAGGCTG...CGCCATTTTCTTATATCTGCTGCTAAATCGCCAAGCCCGGAAGATTAGGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCGAAGAGCCCAGAAGTTaGACGAAAAGTTTCCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AADIRKWRIQSHEGPCLVEEPRS*TKSFRA Trigger: TGCACGGAAACTTTTCGTCCAACTTCTGGGCTCTTC...GACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCATGCCATGTCCTGAGGCTCCCCAAACTTCTGGTTGGAACCGGCATCTTTATGCTTTCTCCGCTCTaGACAAGGCTCACAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: KACHVLRLPKLLVGTGIFMLSPL*TRLTVI Trigger: AATCACTGTGAGCCTTGTTCAGAGCGGAGAAAGCAT...AAAGATGCCGGTTCCAACCAGAAGTTTGGGGAGCCTCAGGACATGGCATGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071648.12 |
||
| CDS-3UTR GCA 90 bp | TTTAGCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTAAAGCCAGGGTCCAGTaGACCCAAGAGAGCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSSRYKKMANPVPRGTVLKARVQ*TQESRK Trigger: CTTTCTGCTCTCTTGGGTGCACTGGACCCTGGCTTT...AAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | ATTAGTGGTTTCAATGGTCTGATCACACAAGGTCCTCCTGGGCTGTACCCAGGAACTTCATGGGACTTCTaGTCTCCTTCTGTCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISGFNGLITQGPPGLYPGTSWDF*SPSVVG Trigger: ACCCACGACAGAAGGAGAGCAGAAGTCCCATGAAGT...TCCTGGGTACAGCCCAGGAGGACCTTGTGTGATCAGACCATTGAAACCACTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| CDS-3UTR GCA 90 bp | CCATTACCAGGCCTCTTCTTCCACCACCGTGTCTTCTCTTGCCGGGACACCTGTTCTTGGACAAACAAATaGTTTCTCCGCTCTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPGLFFHHRVFSCRDTCSWTNK*FLRSEQ Trigger: TTGTTCAGAGCGGAGAAAGCATTTGTTTGTCCAAGA...ACAGGTGTCCCGGCAAGAGAAGACACGGTGGTGGAAGAAGAGGCCTGGTAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071648.12 |
||
| CDS-3UTR CCA 90 bp | CTCGAAGAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGATTAAGGACTGTTCTAGAGCAGAAAGTTCATaGTTTCGGAGGCCCGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LEESPLPSCQAFWIKDCSRAESS*FRRPVR Trigger: CCGGACGGGCCTCCGAAACCATGAACTTTCTGCTCT...AGAACAGTCCTTAATCCAGAAAGCCTGACATGAAGGAAGAGGAGACTCTTCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCCACGTCTGCGGATCTTaGACAAACAAATGCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AADIRKWRIQSHEGPCLVHVCGS*TNKCFL Trigger: GAGAAAGCATTTGTTTGTCCAAGATCCGCAGACGTG...GACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGATTAAGGACTGTTCTGTCTCGTTTAACTCAAGCTaGCTCGCCTTGCAACGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EESPLPSCQAFWIKDCSVSFNSS*LALQRE Trigger: CTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACGA...GACAGAACAGTCCTTAATCCAGAAAGCCTGACATGAAGGAAGAGGAGACTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGAAACAACCCTAATCTTCCGGGCTTGGCGATTTAGCAGCAGATATAAGATGTGCTGGCTTTGGTaGGGTTTGATCCGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: IPETTLIFRAWRFSSRYKMCWLW*GLIRMI Trigger: GATCATGCGGATCAAACCTCACCAAAGCCAGCACAT...CTTATATCTGCTGCTAAATCGCCAAGCCCGGAAGATTAGGGTTGTTTCTGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | AGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGTGTCTTTCTTTGGTCTaGATTCACATCTGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RYKKMANPVPRGTVLGHLCLSLV*IHICCA Trigger: AGCACAGCAGATGTGAATGCAGACCAAAGAAAGACA...CAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGATTAAGGACTGTTCTGTCAACGTCTGCATTCACATCTaGTGTGCTGTAGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESPLPSCQAFWIKDCSVNVCIHI*CAVGSS Trigger: TGAGCTTCCTACAGCACAGCAGATGTGAATGCAGAC...GTTGACAGAACAGTCCTTAATCCAGAAAGCCTGACATGAAGGAAGAGGAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | TCCGGGCTTGGCGATTTAGCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGCGAGTCTGTGTTTTTaGAGGAACATTTACACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGLGDLAADIRKWRIQSHASLCF*RNIYTS Trigger: AGACGTGTAAATGTTCCTGCAAAAACACAGACTCGC...GTGGGACTGGATTCGCCATTTTCTTATATCTGCTGCTAAATCGCCAAGCCCGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGATTAAGGACTGTTCTGTCCATTCACATCTGCTGTaGTGTAGGAAGCTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EESPLPSCQAFWIKDCSVHSHLL*CRKLIS Trigger: AGAGATGAGCTTCCTACAGCACAGCAGATGTGAATG...GACAGAACAGTCCTTAATCCAGAAAGCCTGACATGAAGGAAGAGGAGACTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGAAACAACCCTAATCTTCCGGGCTTGGCGATTTAGCAGCAGATATAAGGCGAGTCTGTGTTTTTaGAGGAACATTTACACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPETTLIFRAWRFSSRYKASLCF*RNIYTS Trigger: AGACGTGTAAATGTTCCTGCAAAAACACAGACTCGC...CTTATATCTGCTGCTAAATCGCCAAGCCCGGAAGATTAGGGTTGTTTCTGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS CCA 90 bp | CCTCTCCGGCTCGGACTGCGAGGCAGCCCGCTCTCTTGCGCGCCTTaGCGGGCTCCTCTCCCTTCTGGAACCGAGGCCCGGGCCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLRLGLRGSPLSCAP*RAPLPSGTEARAGA Trigger: GGCCCCGGCCCGGGCCTCGGTTCCAGAAGGGAGAGGAGCCCGCCAAGGCGCGCAAGAGAGCGGGCTGCCTCGCAGTCCGAGCCGGAGAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS TCA 90 bp | CGCGGCTGGAGCACTGTCTGCGCACACGGCCGCCTCACCCGTCCATaGGCTCGGCTCCTGAGAGCCGAGCGCCCACTGCGGCCCCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGWSTVCAHGRLTRP*ARLLRAERPLRPPL Trigger: GAGAGGGGGCCGCAGTGGGCGCTCGGCTCTCAGGAGCCGAGCTCATGGACGGGTGAGGCGGCCGTGTGCGCAGACAGTGCTCCAGCCGCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | GGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGCACACAGGACGGCTaGAAGATGTACTCTATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GTVLGHLPGNASAGVSPSGTQDG*KMYSIS Trigger: CGAGATAGAGTACATCTTCAAGCCGTCCTGTGTGCC...GGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCCGGAGAAGAGCCCAGAAGTaGGACGAAAAGTTTCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPTRDRAWSPARECVCRRRAQK*DEKFPC Trigger: GCACGGAAACTTTTCGTCCAACTTCTGGGCTCTTCT...CCGGCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | GAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAATGCGTCTGCTCAAGCTGCCTCGCCTaGCAACGCGAGTCTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ESSPTRDRAWSPARECVCSSCLA*QRESVF Trigger: AAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGA...GCAGACGCATTCCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | GTCACCTGCCCGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCACACGTCTGCGGATCTaGGACAAACAAATGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTCPGMRLPESRPPDPKCTRLRI*DKQMLS Trigger: AGAAAGCATTTGTTTGTCCAAGATCCGCAGACGTGT...GCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCGGGCAGGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS GCA 90 bp | GACCACTTGGCATGGTGGAGGTACAGCAGTAAAGCCAGGGTCCAGTaGACCCAAGAGAGCAGAAAGTTCATGGTTTCGGAGGCCCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: DHLAWWRYSSKARVQ*TQESRKFMVSEARP Trigger: CGGACGGGCCTCCGAAACCATGAACTTTCTGCTCTCTTGGGTGCACTGGACCCTGGCTTTACTGCTGTACCTCCACCATGCCAAGTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS TCA 90 bp | CGTTACAGCAGCCTGCACAGCGCATCAGCGGCACACAGGACGGCTTaGAGATGTACTCTATCTCGTCGGGGTACTCCTGGAAGATGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RYSSLHSASAAHRTA*RCTLSRRGTPGRCP Trigger: TGGACATCTTCCAGGAGTACCCCGACGAGATAGAGTACATCTTCAAGCCGTCCTGTGTGCCGCTGATGCGCTGTGCAGGCTGCTGTAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000113519.2 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGGAGGGGCCATTACCAGGCCTCTTCTTCCACCACCGTGTCTTCTCTTGCCGGCACACAGGACGGCTaGAAGATGTACTCTATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RRRGHYQASSSTTVSSLAGTQDG*KMYSIS Trigger: CGAGATAGAGTACATCTTCAAGCCGTCCTGTGTGCC...GGCAAGAGAAGACACGGTGGTGGAAGAAGAGGCCTGGTAATGGCCCCTCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| CDS-3UTR CAA 90 bp | CGGGAATGCGTCTGCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCCTCGAAGAACACGTCTGCGGATCTaGGACAAACAAATGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RECVCRSLALRTQSAPRRTRLRI*DKQMLS Trigger: AGAAAGCATTTGTTTGTCCAAGATCCGCAGACGTGT...TCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGCAGACGCATTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | GCCGGAGTCTCGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTCGCGAGTCTGTGTTTTaGCAGGAACATTTACACGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGVSPSGPKVLLEESPLPRESVF*QEHLHV Trigger: GACGTGTAAATGTTCCTGCAAAAACACAGACTCGCG...AGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | CGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGGCACACAGGACGGCTaGAAGATGTACTCTATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RTQSAPRRVSSSFMSGFLGTQDG*KMYSIS Trigger: CGAGATAGAGTACATCTTCAAGCCGTCCTGTGTGCC...CAGAAAGCCTGACATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTTCCGGTGAGAGGTCTGGTTCCCGAAACCCTGAGGGAGGCTCCTTCCTGCTTGTTCTGTCTTTCTTaGGTCTGCATTCACATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VFPVRGLVPETLREAPSCLFCLS*VCIHIC Trigger: GCAGATGTGAATGCAGACCAAAGAAAGACAGAACAA...GCAGGAAGGAGCCTCCCTCAGGGTTTCGGGAACCAGACCTCTCACCGGAAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | CTCGCCCTCCGGACCCAAAGTGCTCCTCGAAGAGTCTCCTCTTCCTTCATGTCACGCGAGTCTGTGTTTTaGCAGGAACATTTACACGTC | + |
|
Preference number: 5 (lower is better) Translates to: LALRTQSAPRRVSSSFMSRESVF*QEHLHV Trigger: GACGTGTAAATGTTCCTGCAAAAACACAGACTCGCG...TGACATGAAGGAAGAGGAGACTCTTCGAGGAGCACTTTGGGTCCGGAGGGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | ACATGGTTAATCGGTCTTTCCGGTGAGAGGTCTGGTTCCCGAAACCCTGAGGGATCCTATGTGCTGGCTTaGGTGAGGTTTGATCCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TWLIGLSGERSGSRNPEGSYVLA*VRFDPH Trigger: ATGCGGATCAAACCTCACCAAAGCCAGCACATAGGA...TCCCTCAGGGTTTCGGGAACCAGACCTCTCACCGGAAAGACCGATTAACCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | AAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTGGTCACCTGCCCGGGAGTGATTTTCTGGCTTaGTTCTGTCTTTCTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KKMANPVPRGTVLGHLPGSDFLA*FCLSLV Trigger: GACCAAAGAAAGACAGAACAAAGCCAGAAAATCACT...CCCGGGCAGGTGACCAAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071648.12 |
||
| CDS TCA 90 bp | CTGCTGTGCTGTAGGAAGCTCATCTCTCCTATGTGCTGGCTTTGGTaGGGTTTGATCCGCATGATCTGCATGGTGATGTTGCTCTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLCCRKLISPMCWLW*GLIRMICMVMLLSD Trigger: GTCAGAGAGCAACATCACCATGCAGATCATGCGGATCAAACCTCACCAAAGCCAGCACATAGGAGAGATGAGCTTCCTACAGCACAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000113519.2 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | ATGTGGGTGGGTGTGTCTACAGGAATCCCAGAAACAACCCTAATCTTCCGGGCTTCCTATGTGCTGGCTTaGGTGAGGTTTGATCCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: MWVGVSTGIPETTLIFRASYVLA*VRFDPH Trigger: ATGCGGATCAAACCTCACCAAAGCCAGCACATAGGA...AGCCCGGAAGATTAGGGTTGTTTCTGGGATTCCTGTAGACACACCCACCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| CDS-3UTR CAA 90 bp | CCATTACCAGGCCTCTTCTTCCACCACCGTGTCTTCTCTTGCCGGGACACCTGTTTGTTCTGTCTTTCTTaGGTCTGCATTCACATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLPGLFFHHRVFSCRDTCLFCLS*VCIHIC Trigger: GCAGATGTGAATGCAGACCAAAGAAAGACAGAACAA...ACAGGTGTCCCGGCAAGAGAAGACACGGTGGTGGAAGAAGAGGCCTGGTAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 |
||
| CDS-3UTR CAA 90 bp | TTTAGCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTTCAAGCTGCCTCGCCTaGCAACGCGAGTCTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSSRYKKMANPVPRGTVLSSCLA*QRESVF Trigger: AAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGA...AAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGGCTTTCTGGATTAAGGACTGTTCTGTCAACGGTGACGATGATGGCGTGGCTTGCGCTTTCGTTTTaGACCCTTTCCCTTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VRLSGLRTVLSTVTMMAWLALSF*TLSLSS Trigger: CGAGGAAAGGGAAAGGGTCAAAAACGAAAGCGCAAG...CCACGCCATCATCGTCACCGTTGACAGAACAGTCCTTAATCCAGAAAGCCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142351.9 |
||
| CDS GCA 90 bp | GCCTTGCAACGCGAGTCTGTGTTTTTGCAGGAACATTTACACGTCTaGGGATCTTGGACAAACAAATGCTTTCTCCGCTCTGAACAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALQRESVFLQEHLHV*GSWTNKCFLRSEQG Trigger: GCCTTGTTCAGAGCGGAGAAAGCATTTGTTTGTCCAAGATCCGCAGACGTGTAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS GCA 90 bp | TGTCACATCTGCAAGTACGTTCGTTTAACTCAAGCTGCCTCGCCTTaGAACGCGAGTCTGTGTTTTTGCAGGAACATTTACACGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CHICKYVRLTQAASP*NASLCFCRNIYTSA Trigger: CGCAGACGTGTAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACGAACGTACTTGCAGATGTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS GCA 90 bp | CGCCTTGGCTTGTCACATCTGCAAGTACGTTCGTTTAACTCAAGCTaGCTCGCCTTGCAACGCGAGTCTGTGTTTTTGCAGGAACATTTA | + |
|
Preference number: 5 (lower is better) Translates to: RLGLSHLQVRSFNSS*LALQRESVFLQEHL Trigger: TAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACGAACGTACTTGCAGATGTGACAAGCCAAGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS GCA 90 bp | CGTTTAACTCAAGCTGCCTCGCCTTGCAACGCGAGTCTGTGTTTTTaGAGGAACATTTACACGTCTGCGGATCTTGGACAAACAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLTQAASPCNASLCF*RNIYTSADLGQTNA Trigger: AGCATTTGTTTGTCCAAGATCCGCAGACGTGTAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | GAGTCTCCTCTTCCTTCATGTCAGGCTTTCTGGATTAAGGACTGTTCTGTCAACAGAAGAGCCCAGAAGTaGGACGAAAAGTTTCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ESPLPSCQAFWIKDCSVNRRAQK*DEKFPC Trigger: GCACGGAAACTTTTCGTCCAACTTCTGGGCTCTTCT...GTTGACAGAACAGTCCTTAATCCAGAAAGCCTGACATGAAGGAAGAGGAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS TCA 90 bp | TTTACACGTCTGCGGATCTTGGACAAACAAATGCTTTCTCCGCTCTaGACAAGGCTCACAGTGAACGCTCCAGGATTTAAACCGGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: FTRLRILDKQMLSPL*TRLTVNAPGFKPGF Trigger: AAATCCCGGTTTAAATCCTGGAGCGTTCACTGTGAGCCTTGTTCAGAGCGGAGAAAGCATTTGTTTGTCCAAGATCCGCAGACGTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142351.9 |
||
| CDS-3UTR CAA 90 bp | TTTAGCAGCAGATATAAGAAAATGGCGAATCCAGTCCCACGAGGGACCGTGCTTTTGTTCTGTCTTTCTTaGGTCTGCATTCACATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSSRYKKMANPVPRGTVLLFCLS*VCIHIC Trigger: GCAGATGTGAATGCAGACCAAAGAAAGACAGAACAA...AAGCACGGTCCCTCGTGGGACTGGATTCGCCATTTTCTTATATCTGCTGCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS TCA 90 bp | TTTACACGTCTGCGGATCTTGGACAAACAAATGCTTTCTCCGCTCTaGACAAGGCTCACAGTGATTTTCTGGCTTTGTTCTGTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FTRLRILDKQMLSPL*TRLTVIFWLCSVFL Trigger: AAGAAAGACAGAACAAAGCCAGAAAATCACTGTGAGCCTTGTTCAGAGCGGAGAAAGCATTTGTTTGTCCAAGATCCGCAGACGTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071648.12 |
||
| CDS GCA 72 bp | GGCCGGCGCGGCTCGCGCTCCCTCTCCGGCTCGGACTaGGAGGCAGCCCGCTCTCTTGCGCGCCTTGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRRGSRSLSGSD*EAARSLARLGG Trigger: CCCGCCAAGGCGCGCAAGAGAGCGGGCTGCCTCGCAGTCCGAGCCGGAGAGGGAGCGCGAGCCGCGCCGGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS CAA 90 bp | CCCTCTCCGGCTCGGACTGCGAGGCAGCCCGCTCTCTTGCGCGCCTaGGCGGGCTCCTCTCCCTTCTGGAACCGAGGCCCGGGCCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSPARTARQPALLRA*AGSSPFWNRGPGRG Trigger: GCCCCGGCCCGGGCCTCGGTTCCAGAAGGGAGAGGAGCCCGCCAAGGCGCGCAAGAGAGCGGGCTGCCTCGCAGTCCGAGCCGGAGAGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS CAA 90 bp | GCTCGCGCTCCCTCTCCGGCTCGGACTGCGAGGCAGCCCGCTCTCTaGCGCGCCTTGGCGGGCTCCTCTCCCTTCTGGAACCGAGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ARAPSPARTARQPAL*RALAGSSPFWNRGP Trigger: CGGGCCTCGGTTCCAGAAGGGAGAGGAGCCCGCCAAGGCGCGCAAGAGAGCGGGCTGCCTCGCAGTCCGAGCCGGAGAGGGAGCGCGAGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS CCA 72 bp | CTCGGACTGCGAGGCAGCCCGCTCTCTTGCGCGCCTTaGCGGGCTCCTCTCCCTTCTGGAACCGAGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLRGSPLSCAP*RAPLPSGTEAR Trigger: CCGGGCCTCGGTTCCAGAAGGGAGAGGAGCCCGCCAAGGCGCGCAAGAGAGCGGGCTGCCTCGCAGTCCGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS TCA 72 bp | AGCACTGTCTGCGCACACGGCCGCCTCACCCGTCCATaGGCTCGGCTCCTGAGAGCCGAGCGCCCACTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: STVCAHGRLTRP*ARLLRAERPLR Trigger: CCGCAGTGGGCGCTCGGCTCTCAGGAGCCGAGCTCATGGACGGGTGAGGCGGCCGTGTGCGCAGACAGTGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS GCA 72 bp | CCTCTCCGGCTCGGACTGCGAGGCAGCCCGCTCTCTTaGGCGCCTTGGCGGGCTCCTCTCCCTTCTGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: PLRLGLRGSPLS*APWRAPLPSGT Trigger: GGTTCCAGAAGGGAGAGGAGCCCGCCAAGGCGCGCAAGAGAGCGGGCTGCCTCGCAGTCCGAGCCGGAGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS CCA 72 bp | CCAGGGTCCAGTGCACCCAAGAGAGCAGAAAGTTCATaGTTTCGGAGGCCCGTCCGGGGCCGGCGCGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PGSSAPKRAESS*FRRPVRGRRGS Trigger: CGAGCCGCGCCGGCCCCGGACGGGCCTCCGAAACCATGAACTTTCTGCTCTCTTGGGTGCACTGGACCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS CAA 90 bp | GGCTTCTCCAGGCCCGAGCTAGCACTTCTCCCAGCTCCGATCGGTTaGTCTCCTGCGGCGCAGACCACGGCTACTACGGAGCGAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GFSRPELALLPAPIG*SPAAQTTATTEREE Trigger: CTCTTCTCGCTCCGTAGTAGCCGTGGTCTGCGCCGCAGGAGACAAACCGATCGGAGCTGGGAGAAGTGCTAGCTCGGGCCTGGAGAAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS GCA 72 bp | GGGCACGCACTCCAGGGCTTCATCGTTACAGCAGCCTaGACAGCGCATCAGCGGCACACAGGACGGCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GHALQGFIVTAA*TAHQRHTGRLE Trigger: TTCAAGCCGTCCTGTGTGCCGCTGATGCGCTGTGCAGGCTGCTGTAACGATGAAGCCCTGGAGTGCGTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000113519.2 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS CCA 72 bp | CCTTCTGTCGTGGGTGCAGCCTGGGACCACTTGGCATaGTGGAGGTACAGCAGTAAAGCCAGGGTCCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSVVGAAWDHLA*WRYSSKARVQC Trigger: GCACTGGACCCTGGCTTTACTGCTGTACCTCCACCATGCCAAGTGGTCCCAGGCTGCACCCACGACAGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000113519.2 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS CCA 72 bp | ACCACGGCTACTACGGAGCGAGAAGAGCCCAGAAGTTaGACGAAAAGTTTCCGTGCAATCCCGCGAGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TTATTEREEPRS*TKSFRAIPRAP Trigger: CGGGGCTCGCGGGATTGCACGGAAACTTTTCGTCCAACTTCTGGGCTCTTCTCGCTCCGTAGTAGCCGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS CAA 72 bp | CAGCCTGCACAGCGCATCAGCGGCACACAGGACGGCTaGAAGATGTACTCTATCTCGTCGGGGTACTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QPAQRISGTQDG*KMYSISSGYSW Trigger: CCAGGAGTACCCCGACGAGATAGAGTACATCTTCAAGCCGTCCTGTGTGCCGCTGATGCGCTGTGCAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000113519.2 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS CAA 72 bp | GACCACGGCTACTACGGAGCGAGAAGAGCCCAGAAGTaGGACGAAAAGTTTCCGTGCAATCCCGCGAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: DHGYYGARRAQK*DEKFPCNPASP Trigger: GGGGCTCGCGGGATTGCACGGAAACTTTTCGTCCAACTTCTGGGCTCTTCTCGCTCCGTAGTAGCCGTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS TCA 72 bp | AGCCTGCACAGCGCATCAGCGGCACACAGGACGGCTTaGAGATGTACTCTATCTCGTCGGGGTACTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLHSASAAHRTA*RCTLSRRGTPG Trigger: TCCAGGAGTACCCCGACGAGATAGAGTACATCTTCAAGCCGTCCTGTGTGCCGCTGATGCGCTGTGCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000113519.2 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS CAA 90 bp | TCGTTACAGCAGCCTGCACAGCGCATCAGCGGCACACAGGACGGCTaGAAGATGTACTCTATCTCGTCGGGGTACTCCTGGAAGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLQQPAQRISGTQDG*KMYSISSGYSWKMS Trigger: GGACATCTTCCAGGAGTACCCCGACGAGATAGAGTACATCTTCAAGCCGTCCTGTGTGCCGCTGATGCGCTGTGCAGGCTGCTGTAACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000113519.2 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS GCA 72 bp | GCATGGTGGAGGTACAGCAGTAAAGCCAGGGTCCAGTaGACCCAAGAGAGCAGAAAGTTCATGGTTTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AWWRYSSKARVQ*TQESRKFMVSE Trigger: CTCCGAAACCATGAACTTTCTGCTCTCTTGGGTGCACTGGACCCTGGCTTTACTGCTGTACCTCCACCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071648.12 ENSMUST00000142351.9 |
||
| CDS GCA 72 bp | CAAGCTGCCTCGCCTTGCAACGCGAGTCTGTGTTTTTaGAGGAACATTTACACGTCTGCGGATCTTGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: QAASPCNASLCF*RNIYTSADLGQ Trigger: TTGTCCAAGATCCGCAGACGTGTAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS CAA 72 bp | TCAAGCTGCCTCGCCTTGCAACGCGAGTCTGTGTTTTaGCAGGAACATTTACACGTCTGCGGATCTTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSCLALQRESVF*QEHLHVCGSWT Trigger: TGTCCAAGATCCGCAGACGTGTAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS TCA 72 bp | CTGCGGATCTTGGACAAACAAATGCTTTCTCCGCTCTaGACAAGGCTCACAGTGACGGGATTTCTTGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LRILDKQMLSPL*TRLTVTGFLAL Trigger: AAGCGCAAGAAATCCCGTCACTGTGAGCCTTGTTCAGAGCGGAGAAAGCATTTGTTTGTCCAAGATCCGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113520.8 |
||
| CDS TCA 72 bp | TGTAGGAAGCTCATCTCTCCTATGTGCTGGCTTTGGTaGGGTTTGATCCGCATGATCTGCATGGTGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CRKLISPMCWLW*GLIRMICMVML Trigger: CAACATCACCATGCAGATCATGCGGATCAAACCTCACCAAAGCCAGCACATAGGAGAGATGAGCTTCCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000113519.2 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS GCA 72 bp | TTGTCACATCTGCAAGTACGTTCGTTTAACTCAAGCTaGCTCGCCTTGCAACGCGAGTCTGTGTTTTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSHLQVRSFNSS*LALQRESVFLQ Trigger: CTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACGAACGTACTTGCAGATGTGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS CAA 90 bp | TCGTTTAACTCAAGCTGCCTCGCCTTGCAACGCGAGTCTGTGTTTTaGCAGGAACATTTACACGTCTGCGGATCTTGGACAAACAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: SFNSSCLALQRESVF*QEHLHVCGSWTNKC Trigger: GCATTTGTTTGTCCAAGATCCGCAGACGTGTAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS CAA 90 bp | TTGTCACATCTGCAAGTACGTTCGTTTAACTCAAGCTGCCTCGCCTaGCAACGCGAGTCTGTGTTTTTGCAGGAACATTTACACGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSHLQVRSFNSSCLA*QRESVFLQEHLHVC Trigger: GCAGACGTGTAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACGAACGTACTTGCAGATGTGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
||
| CDS TCA 72 bp | CTGCGGATCTTGGACAAACAAATGCTTTCTCCGCTCTaGACAAGGCTCACAGTGAACGCTCCAGGATTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LRILDKQMLSPL*TRLTVNAPGFK Trigger: TTTAAATCCTGGAGCGTTCACTGTGAGCCTTGTTCAGAGCGGAGAAAGCATTTGTTTGTCCAAGATCCGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142351.9 |
||
| CDS GCA 72 bp | CGCGAGTCTGTGTTTTTGCAGGAACATTTACACGTCTaGGGATCTTGGACAAACAAATGCTTTCTCCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RESVFLQEHLHV*GSWTNKCFLRS Trigger: AGAGCGGAGAAAGCATTTGTTTGTCCAAGATCCGCAGACGTGTAAATGTTCCTGCAAAAACACAGACTCGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
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| CDS GCA 72 bp | TGCAAGTACGTTCGTTTAACTCAAGCTGCCTCGCCTTaGAACGCGAGTCTGTGTTTTTGCAGGAACATTTAC | + |
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Preference number: 6 (lower is better) Translates to: CKYVRLTQAASP*NASLCFCRNIY Trigger: GTAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACGAACGTACTTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
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| CDS CAA 72 bp | CTGCAAGTACGTTCGTTTAACTCAAGCTGCCTCGCCTaGCAACGCGAGTCTGTGTTTTTGCAGGAACATTTA | + |
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Preference number: 6 (lower is better) Translates to: LQVRSFNSSCLA*QRESVFLQEHL Trigger: TAAATGTTCCTGCAAAAACACAGACTCGCGTTGCAAGGCGAGGCAGCTTGAGTTAAACGAACGTACTTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
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| CDS CAA 90 bp | CTGAACAAGGCTCACAGTGATTTTCTGGCTTTGTTCTGTCTTTCTTaGGTCTGCATTCACATCTGCTGTGCTGTAGGAAGCTCATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LNKAHSDFLALFCLS*VCIHICCAVGSSSL Trigger: GAGAGATGAGCTTCCTACAGCACAGCAGATGTGAATGCAGACCAAAGAAAGACAGAACAAAGCCAGAAAATCACTGTGAGCCTTGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071648.12 |
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| CDS TCA 72 bp | CTGCGGATCTTGGACAAACAAATGCTTTCTCCGCTCTaGACAAGGCTCACAGTGATTTTCTGGCTTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LRILDKQMLSPL*TRLTVIFWLCS Trigger: AGAACAAAGCCAGAAAATCACTGTGAGCCTTGTTCAGAGCGGAGAAAGCATTTGTTTGTCCAAGATCCGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071648.12 |
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| CDS GCA 72 bp | GCTTTGTTCTGTCTTTCTTTGGTCTGCATTCACATCTaGTGTGCTGTAGGAAGCTCATCTCTCCTATGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ALFCLSLVCIHI*CAVGSSSLLCA Trigger: AGCACATAGGAGAGATGAGCTTCCTACAGCACAGCAGATGTGAATGCAGACCAAAGAAAGACAGAACAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024747.14 ENSMUST00000071648.12 ENSMUST00000113519.2 ENSMUST00000113520.8 ENSMUST00000142351.9 |
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| CDS CCA 72 bp | GTGTTTTTGCAGGAACATTTACACGTCTGCGGATCTTaGACAAACAAATGCTTTCTCCGCTCTGAACAAGGC | + |
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Preference number: 6 (lower is better) Translates to: VFLQEHLHVCGS*TNKCFLRSEQG Trigger: GCCTTGTTCAGAGCGGAGAAAGCATTTGTTTGTCCAAGATCCGCAGACGTGTAAATGTTCCTGCAAAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071648.12 ENSMUST00000113520.8 ENSMUST00000142351.9 |
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