Pregenerated sensors for VDR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022479Ensembl transcript IDs: ENSMUST00000023119.15, ENSMUST00000126568.8
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCTTTGGGCACTTCTCAGTGATGGACCCCTTGGGCTGAGAAACTaGTATTCTCTGGAGGCCTGTGGAGTTTCCTGGAGAGGCAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: SLWALLSDGPLGLRN*YSLEACGVSWRGKG Trigger: GCCCTTGCCTCTCCAGGAAACTCCACAGGCCTCCAGAGAATACCAGTTTCTCAGCCCAAGGGGTCCATCACTGAGAAGTGCCCAAAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR TCA 90 bp | CAGGCAGGTAGGTTTGGAATCGGGGTAGGTACAGGTACCTGTCCCTaGGGAATGGACTCATCTCTTCTGCCTGCCTCCCTTGACACAAGC | + |
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Preference number: 1 (lower is better) Translates to: QAGRFGIGVGTGTCP*GMDSSLLPASLDTS Trigger: GCTTGTGTCAAGGGAGGCAGGCAGAAGAGATGAGTCCATTCCTCAGGGACAGGTACCTGTACCTACCCCGATTCCAAACCTACCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CCA 90 bp | CTTGGGCTGAGAAACTGGTATTCTCTGGAGGCCTGTGGAGTTTCCTaGAGAGGCAAGGGCTGGGAAGACAGAGGCTTTCCAGTGCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: LGLRNWYSLEACGVS*RGKGWEDRGFPVPD Trigger: ATCAGGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGCCTCTCCAGGAAACTCCACAGGCCTCCAGAGAATACCAGTTTCTCAGCCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR GCA 90 bp | TCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTaGTTGGGCTCTGTATTCCATTCCCTGGGGACTTTCCAATGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SICCPAGRLALPAPH*LGSVFHSLGTFQWW Trigger: CCACCATTGGAAAGTCCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR GCA 90 bp | GAGTTTCCTGGAGAGGCAAGGGCTGGGAAGACAGAGGCTTTCCAGTaGCTGATGCACACAAGGCTGATGCAGAGAGTCCTAAAGCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: EFPGEARAGKTEAFQ*LMHTRLMQRVLKPS Trigger: ACTTGGCTTTAGGACTCTCTGCATCAGCCTTGTGTGCATCAGGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGCCTCTCCAGGAAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR GCA 90 bp | AAGATAGATGGACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTaGCTGCTCCTCATTGCTTGGGCTCTGTATTCCATTCCCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: KIDGPPFVVLLGGWL*LLLIAWALYSIPWG Trigger: TCCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGTCCATCTATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CCA 90 bp | TTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTTaGGCTCTGTATTCCATTCCCTGGGGACTTTCCAATGGTGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: FVVLLGGWLCLLLIA*ALYSIPWGLSNGGF Trigger: GAAACCACCATTGGAAAGTCCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CCA 90 bp | CCACCAGATTTGTCATTTATCTCAACCATCTCTGGTGGCCTGGTTTaGACTCCTCCCCTACTTTCTCCCACGCAGGCAGCAGGAGGATTC | + |
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Preference number: 1 (lower is better) Translates to: PPDLSFISTISGGLV*TPPLLSPTQAAGGF Trigger: GAATCCTCCTGCTGCCTGCGTGGGAGAAAGTAGGGGAGGAGTCCAAACCAGGCCACCAGAGATGGTTGAGATAAATGACAAATCTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CCA 90 bp | GACTTCCACCAGATTTGTCATTTATCTCAACCATCTCTGGTGGCCTaGTTTGGACTCCTCCCCTACTTTCTCCCACGCAGGCAGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: DFHQICHLSQPSLVA*FGLLPYFLPRRQQE Trigger: CTCCTGCTGCCTGCGTGGGAGAAAGTAGGGGAGGAGTCCAAACCAGGCCACCAGAGATGGTTGAGATAAATGACAAATCTGGTGGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CCA 90 bp | GTGACAAAGATAGATGGACCTCCATTTGTTGTCCTGCTGGGAGGCTaGCTTTGCCTGCTCCTCATTGCTTGGGCTCTGTATTCCATTCCC | + |
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Preference number: 1 (lower is better) Translates to: VTKIDGPPFVVLLGG*LCLLLIAWALYSIP Trigger: GGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGTCCATCTATCTTTGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CCA 90 bp | TCTAGGGATGGGGGAAGAAGTCCACTTTACCAGAGGTACTGGACTTaGGGACTTACCATAACAAAACCTCAAAGGTGGGAACTGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: SRDGGRSPLYQRYWT*GLTITKPQRWELQG Trigger: GCCCTGCAGTTCCCACCTTTGAGGTTTTGTTATGGTAAGTCCCCAAGTCCAGTACCTCTGGTAAAGTGGACTTCTTCCCCCATCCCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CCA 90 bp | GATAACTTCTGGGATACTCTTGGTGATCAAATTGTAAGGCCTGGGTaGCTCAAGGACCTGCTTTCCTGGGTAGGTGGTAAGGCACTGGCA | + |
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Preference number: 1 (lower is better) Translates to: DNFWDTLGDQIVRPG*LKDLLSWVGGKALA Trigger: TGCCAGTGCCTTACCACCTACCCAGGAAAGCAGGTCCTTGAGCCACCCAGGCCTTACAATTTGATCACCAAGAGTATCCCAGAAGTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR TCA 90 bp | AGATACGTCCCTAGCCCATCACCTGACCGTTTCGTAGGTCTACATTaGCTTTTGGGTGGTAGAGTGAAGAGTCAGGAGGAACTGGACCAA | + |
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Preference number: 1 (lower is better) Translates to: RYVPSPSPDRFVGLH*LLGGRVKSQEELDQ Trigger: TTGGTCCAGTTCCTCCTGACTCTTCACTCTACCACCCAAAAGTCAATGTAGACCTACGAAACGGTCAGGTGATGGGCTAGGGACGTATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR TCA 90 bp | ACACCCCCACAACGCATGATCAGCAAGAAGTATATTTGGGGTGAATaGGACCAGGGTTCCAAAGTCCTGGACTGGGCTACTACAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: TPPQRMISKKYIWGE*DQGSKVLDWATTEE Trigger: TTCCTCTGTAGTAGCCCAGTCCAGGACTTTGGAACCCTGGTCTCATTCACCCCAAATATACTTCTTGCTGATCATGCGTTGTGGGGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CCA 90 bp | CAGGAGGATTCTCCTATCTTGGGAAATCTTGCTGATCTCTCATTTTaGTACCCATTTCCGCCTCGGAAGTGTGAGCTCTTTCAAGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: QEDSPILGNLADLSF*YPFPPRKCELFQGP Trigger: AGGGCCTTGAAAGAGCTCACACTTCCGAGGCGGAAATGGGTACCAAAATGAGAGATCAGCAAGATTTCCCAAGATAGGAGAATCCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR TCA 90 bp | AGCTCTTTCAAGGCCCTGCCTTTGTACATTCAGAATAAAAATAGATaGTGCTGTTCTCTCCCAGTTCGGCTTCGGAATCCTACTTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: SSFKALPLYIQNKNR*CCSLPVRLRNPTWS Trigger: GGACCAAGTAGGATTCCGAAGCCGAACTGGGAGAGAACAGCATCATCTATTTTTATTCTGAATGTACAAAGGCAGGGCCTTGAAAGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR GCA 90 bp | GTAACAATAATCATTAATATACAGTATTTTCACACACACACACACTaGTCTGAATCAGGTGCCACCACCCTCAGTGTTAGAACACAGTAC | + |
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Preference number: 1 (lower is better) Translates to: VTIIINIQYFHTHTH*SESGATTLSVRTQY Trigger: GTACTGTGTTCTAACACTGAGGGTGGTGGCACCTGATTCAGAGCAGTGTGTGTGTGTGTGAAAATACTGTATATTAATGATTATTGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR TCA 90 bp | TTTATTTACAGCGGTACTTGTCACGTAGCAAGCGCTATGAAAGTGTaGGCATCTTTTATTATCATCGGCAAAGCTTTTTCATTGGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: FIYSGTCHVASAMKV*ASFIIIGKAFSLVY Trigger: ATAAACCAATGAAAAAGCTTTGCCGATGATAATAAAAGATGCTCACACTTTCATAGCGCTTGCTACGTGACAAGTACCGCTGTAAATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGGCTGGGAAGACAGAGGCTTTCCAGTGCCTGATGCACACAAGGCTGATGGAGGCACTGCTGGGCTaGAACCAGCCCAGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ARAGKTEAFQCLMHTRLMEALLG*NQPRAW Trigger: CCAGGCCCTGGGCTGGTTGCAGCCCAGCAGTGCCTC...CATCAGCCTTGTGTGCATCAGGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGGCTCGTGGGGCCATGCTCCGTCTGACCTTAGCCCTCTATTGGTGCTTCAGGCCCCACAGTGACTaGCTCCCCTGGGTCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: SGARGAMLRLTLALYWCFRPHSD*LPWVRI Trigger: TATTCTGACCCAGGGGAGTCAGTCACTGTGGGGCCT...GAAGCACCAATAGAGGGCTAAGGTCAGACGGAGCATGGCCCCACGAGCCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR TCA 90 bp | ACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTTGGGGCAGGAGAAAGGATaGGCCAGACAGACACGGGCC | + |
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Preference number: 2 (lower is better) Translates to: TSICCPAGRLALPAPHCLGQEKG*ARQTRA Trigger: GGCCCGTGTCTGTCTGGCTCATCCTTTCTCCTGCCC...CAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTCCATCTGGGCCACTGTTGGTTTTCTGCCATCCCATTCCACTGGGTGGATCTGCCTGCCTCCCTTaGCACAAGCAGTGGCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GGPSGPLLVFCHPIPLGGSACLP*HKQWPL Trigger: AAGGGGCCACTGCTTGTGTCAAGGGAGGCAGGCAGA...TCCACCCAGTGGAATGGGATGGCAGAAAACCAACAGTGGCCCAGATGGACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGGCTGGGAAGACAGAGGCTTTCCAGTGCCTGATGCACACAAGGCTGATGAAGGGAGATCAGGTGTaGGGCTGGGCAGGAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: ARAGKTEAFQCLMHTRLMKGDQV*GWAGER Trigger: CCTTTCTCCTGCCCAGCCTCACACCTGATCTCCCTT...CATCAGCCTTGTGTGCATCAGGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR GCA 90 bp | ATAGAGGAGAGGAGGGGTCCCAGTAGCTCCAGGCTTCAGACACCTCAGCTTGGTCTGGGAGGCTGGCTTTaGCTGCTCCTCATTGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: IEERRGPSSSRLQTPQLGLGGWL*LLLIAW Trigger: CCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAG...ACCAAGCTGAGGTGTCTGAAGCCTGGAGCTACTGGGACCCCTCCTCTCCTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR CCA 90 bp | GCTCGTGGGGCCATGCTCCGTCTGACCTTAGCCCTCTATTGGTGCTTCCAGTGTCATTTGTTGTCCTGCTaGGAGGCTGGCTTTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: ARGAMLRLTLALYWCFQCHLLSC*EAGFAC Trigger: GCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATG...ACACTGGAAGCACCAATAGAGGGCTAAGGTCAGACGGAGCATGGCCCCACGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR CCA 90 bp | GCTCGTGGGGCCATGCTCCGTCTGACCTTAGCCCTCTATTGGTGCTTCCAGTGTAAGGACCTGCTTTCCTaGGTAGGTGGTAAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: ARGAMLRLTLALYWCFQCKDLLS*VGGKAL Trigger: CAGTGCCTTACCACCTACCCAGGAAAGCAGGTCCTT...ACACTGGAAGCACCAATAGAGGGCTAAGGTCAGACGGAGCATGGCCCCACGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGAGTTTCCTGGAGAGGCAAGGGCTGGGAAGACAGAGGCTTTCCAGTGCCACCTTTTCCCTGAGGTaGGAGAGCTCATGTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LWSFLERQGLGRQRLSSATFSLR*ESSCLA Trigger: AGCCAGACATGAGCTCTCCCACCTCAGGGAAAAGGT...GGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGCCTCTCCAGGAAACTCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTCCATCTGGGCCACTGTTGGTTTTCTGCCATCCCATTCCACTGGGTGGAGCAGTGTCTCCTAACTaGGATCTCAAGGGACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GGPSGPLLVFCHPIPLGGAVSPN*DLKGQE Trigger: CTCCTGTCCCTTGAGATCTCAGTTAGGAGACACTGC...TCCACCCAGTGGAATGGGATGGCAGAAAACCAACAGTGGCCCAGATGGACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGAGTTTCCTGGAGAGGCAAGGGCTGGGAAGACAGAGGCTTTCCAGTGCCTGGACTCATCTCTTCTaGCTGCCTCCCTTGACACAA | + |
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Preference number: 2 (lower is better) Translates to: LWSFLERQGLGRQRLSSAWTHLF*LPPLTQ Trigger: TTGTGTCAAGGGAGGCAGGCAGAAGAGATGAGTCCA...GGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGCCTCTCCAGGAAACTCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTCCATCTGGGCCACTGTTGGTTTTCTGCCATCCCATTCCACTGGGTGGACTGGGGACTTTCCAATaGTGGTTTCTAGGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GGPSGPLLVFCHPIPLGGLGTFQ*WFLGPW Trigger: CCAGGGACCTAGAAACCACCATTGGAAAGTCCCCAG...TCCACCCAGTGGAATGGGATGGCAGAAAACCAACAGTGGCCCAGATGGACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CAA 90 bp | CTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATaGCTTGGGCTCTGTATTCCATTCCCTGGGGACTTTCCAATGGTG | + |
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Preference number: 2 (lower is better) Translates to: LHLLSCWEAGFACSS*LGLCIPFPGDFPMV Trigger: CACCATTGGAAAGTCCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGCTTGCCTCCTTAGGATGGGTGGCTGAGTTTATTACCCAGGGAAAAGGGCTAGGCAGAGCTCTCTaGCTTCAGCCTCTGCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: QVLASLGWVAEFITQGKGLGRAL*LQPLPS Trigger: AGAGGGCAGAGGCTGAAGGCAGAGAGCTCTGCCTAG...CCCTTTTCCCTGGGTAATAAACTCAGCCACCCATCCTAAGGAGGCAAGCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGGCTGGGAAGACAGAGGCTTTCCAGTGCCTGATGCACACAAGGCTGATGGCCATCCCATTCCACTaGGTGGAAAGGGTAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: ARAGKTEAFQCLMHTRLMAIPFH*VERVAF Trigger: AAAAGCTACCCTTTCCACCCAGTGGAATGGGATGGC...CATCAGCCTTGTGTGCATCAGGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CAA 90 bp | AAAGATAGATGGACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTaGCCTGCTCCTCATTGCTTGGGCTCTGTATTCCATTCCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: KDRWTSICCPAGRLA*PAPHCLGSVFHSLG Trigger: CCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGTCCATCTATCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR GCA 90 bp | GCTACTACAGAGGAAGAAATGGAGTTTGAAGATACGTCCCTAGCCCATCACCTGTCTGCCTTCAGCCTCTaGCCTCTACCCTCTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: ATTEEEMEFEDTSLAHHLSAFSL*PLPSSP Trigger: GGGGGAAGAGGGTAGAGGGCAGAGGCTGAAGGCAGA...CAGGTGATGGGCTAGGGACGTATCTTCAAACTCCATTTCTTCCTCTGTAGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGGCTGGGAAGACAGAGGCTTTCCAGTGCCTGATGCACACAAGGCTGATGTTGCCTGCTCCTCATTaGTTGGGCTCTGTATTCCAT | + |
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Preference number: 2 (lower is better) Translates to: ARAGKTEAFQCLMHTRLMLPAPH*LGSVFH Trigger: ATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAA...CATCAGCCTTGTGTGCATCAGGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CAA 90 bp | ATTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTaGGGCTCTGTATTCCATTCCCTGGGGACTTTCCAATGGTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: ICCPAGRLALPAPHC*GSVFHSLGTFQWWF Trigger: AAACCACCATTGGAAAGTCCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CAA 90 bp | AGGGATGAAGACAGGGCTAGGGACGTTCTGAAAGTTGGGGTCAACTaGGTCCTGACACATCTAATAGCTATAGAGGAGAGGAGGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: RDEDRARDVLKVGVN*VLTHLIAIEERRGP Trigger: GGGACCCCTCCTCTCCTCTATAGCTATTAGATGTGTCAGGACCAAGTTGACCCCAACTTTCAGAACGTCCCTAGCCCTGTCTTCATCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR GCA 90 bp | CTCGGAAGTGTGAGCTCTTTCAAGGCCCTGCCTTTGTACATTCAGAATAAAAATAGGGGCAGGAGGCACTaGTGGGCTGCAACCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LGSVSSFKALPLYIQNKNRGRRH*WAATSP Trigger: TGGGCTGGTTGCAGCCCAGCAGTGCCTCCTGCCCCT...ATTTTTATTCTGAATGTACAAAGGCAGGGCCTTGAAAGAGCTCACACTTCCGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCAGTGGAAACAGGCTCACTACAAAGCAGCCCGGGACCATAAGTTCAAATGGGACAGGAGCAACCTaGAGTCTACAGGAAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: QSSGNRLTTKQPGTISSNGTGAT*SLQERE Trigger: CTCCCTTTCCTGTAGACTGCAGGTTGCTCCTGTCCC...ATTTGAACTTATGGTCCCGGGCTGCTTTGTAGTGAGCCTGTTTCCACTGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGCTTGCCTCCTTAGGATGGGTGGCTGAGTTTATTACCCAGGGAAAAGGGCACACACACACACACTaGTCTGAATCAGGTGCCACC | + |
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Preference number: 2 (lower is better) Translates to: QVLASLGWVAEFITQGKGHTHTH*SESGAT Trigger: GGTGGCACCTGATTCAGAGCAGTGTGTGTGTGTGTG...CCCTTTTCCCTGGGTAATAAACTCAGCCACCCATCCTAAGGAGGCAAGCACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR CCA 90 bp | GCTACTACAGAGGAAGAAATGGAGTTTGAAGATACGTCCCTAGCCCATCACCTGGTCCTGCTGGGAGGCTaGCTTTGCCTGCTCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: ATTEEEMEFEDTSLAHHLVLLGG*LCLLLI Trigger: AATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGAC...CAGGTGATGGGCTAGGGACGTATCTTCAAACTCCATTTCTTCCTCTGTAGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CAA 90 bp | GCTAGGGAGGGCTCCTTGGTTAGTGTGGTAGAGTATTTGGTCATCTaGGCAGTGAATGAGTCCATGAGTATACCAGCAGAGGAAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: AREGSLVSVVEYLVI*AVNESMSIPAEEGG Trigger: GCCTCCTTCCTCTGCTGGTATACTCATGGACTCATTCACTGCCAAGATGACCAAATACTCTACCACACTAACCAAGGAGCCCTCCCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR CAA 90 bp | CTCCCCTACTTTCTCCCACGCAGGCAGCAGGAGGATTCTCCTATCTaGGGAAATCTTGCTGATCTCTCATTTTGGTACCCATTTCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: LPYFLPRRQQEDSPI*GNLADLSFWYPFPP Trigger: AGGCGGAAATGGGTACCAAAATGAGAGATCAGCAAGATTTCCCAAGATAGGAGAATCCTCCTGCTGCCTGCGTGGGAGAAAGTAGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR TCA 90 bp | CTGACACATCTAATAGCTATAGAGGAGAGGAGGGGTCCCAGTAGCTCCAGGCTTACAGGTACCTGTCCCTaGGGAATGGACTCATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LTHLIAIEERRGPSSSRLTGTCP*GMDSSL Trigger: AAGAGATGAGTCCATTCCTCAGGGACAGGTACCTGT...AAGCCTGGAGCTACTGGGACCCCTCCTCTCCTCTATAGCTATTAGATGTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR TCA 90 bp | GCTACTACAGAGGAAGAAATGGAGTTTGAAGATACGTCCCTAGCCCATCACCTGCCTCTACCTTTTCCCTaGGGTGGGAGAGCTCATGTC | + |
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Preference number: 2 (lower is better) Translates to: ATTEEEMEFEDTSLAHHLPLPFP*GGRAHV Trigger: GACATGAGCTCTCCCACCTCAGGGAAAAGGTAGAGG...CAGGTGATGGGCTAGGGACGTATCTTCAAACTCCATTTCTTCCTCTGTAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGCTTGCCTCCTTAGGATGGGTGGCTGAGTTTATTACCCAGGGAAAAGGGAATAATACAGACAGGTaGCAGGAGGAGACGGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: QVLASLGWVAEFITQGKGNNTDR*QEETGH Trigger: GTGTCCCGTCTCCTCCTGCCACCTGTCTGTATTATT...CCCTTTTCCCTGGGTAATAAACTCAGCCACCCATCCTAAGGAGGCAAGCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTGCTTGCCTCCTTAGGATGGGTGGCTGAGTTTATTACCCAGGGAAAAGGGTTCGTAGGTCTACATTaGCTTTTGGGTGGTAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: QVLASLGWVAEFITQGKGFVGLH*LLGGRV Trigger: CACTCTACCACCCAAAAGTCAATGTAGACCTACGAA...CCCTTTTCCCTGGGTAATAAACTCAGCCACCCATCCTAAGGAGGCAAGCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR-3UTR CCA 90 bp | GCTACTACAGAGGAAGAAATGGAGTTTGAAGATACGTCCCTAGCCCATCACCTGCTGCTCCTCATTGCTTaGGCTCTGTATTCCATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: ATTEEEMEFEDTSLAHHLLLLIA*ALYSIP Trigger: GGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAG...CAGGTGATGGGCTAGGGACGTATCTTCAAACTCCATTTCTTCCTCTGTAGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR-3UTR TCA 90 bp | GCTACTACAGAGGAAGAAATGGAGTTTGAAGATACGTCCCTAGCCCATCACCTGCTGGGATACTCTTGGTaGTCAAATTGTAAGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ATTEEEMEFEDTSLAHHLLGYSW*SNCKAW Trigger: CCAGGCCTTACAATTTGATCACCAAGAGTATCCCAG...CAGGTGATGGGCTAGGGACGTATCTTCAAACTCCATTTCTTCCTCTGTAGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR-3UTR CCA 90 bp | CTCGGAAGTGTGAGCTCTTTCAAGGCCCTGCCTTTGTACATTCAGAATAAAAATATTGTAAGGCCTGGGTaGCTCAAGGACCTGCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGSVSSFKALPLYIQNKNIVRPG*LKDLLS Trigger: GGAAAGCAGGTCCTTGAGCCACCCAGGCCTTACAAT...ATTTTTATTCTGAATGTACAAAGGCAGGGCCTTGAAAGAGCTCACACTTCCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR-3UTR GCA 90 bp | AAAACAAACAAACACTTTTGTCTCTCTCTCGGGAAGTCTCTTAGGAAGCTCTTTCCACAAGTTCTAACCTaGCCCCTCTACCTTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: KTNKHFCLSLGKSLRKLFPQVLT*PLYLFP Trigger: AGGGAAAAGGTAGAGGGGGCAGGTTAGAACTTGTGG...AAAGAGCTTCCTAAGAGACTTCCCGAGAGAGAGACAAAAGTGTTTGTTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR-3UTR CCA 90 bp | AAAACAAACAAACACTTTTGTCTCTCTCTCGGGAAGTCTCTTAGGAAGCTCTTTAAACATAGGGCCAGGTaGACACTAAGGGTTCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KTNKHFCLSLGKSLRKLFKHRAR*TLRVLL Trigger: CAGAAGAACCCTTAGTGTCCACCTGGCCCTATGTTT...AAAGAGCTTCCTAAGAGACTTCCCGAGAGAGAGACAAAAGTGTTTGTTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | CTGCCTGCCTCCCTTGACACAAGCAGTGGCCCCTTATaGCGGAGGCATTCCCTAGGCAGAGCTCTCTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LPASLDTSSGPL*RRHSLGRALCL Trigger: AAGGCAGAGAGCTCTGCCTAGGGAATGCCTCCGCCATAAGGGGCCACTGCTTGTGTCAAGGGAGGCAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR GCA 72 bp | TGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTaGTTGGGCTCTGTATTCCATTCCCTGGGGACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CPAGRLALPAPH*LGSVFHSLGTF Trigger: GAAAGTCCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR GCA 72 bp | GGAGAGGCAAGGGCTGGGAAGACAGAGGCTTTCCAGTaGCTGATGCACACAAGGCTGATGCAGAGAGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GEARAGKTEAFQ*LMHTRLMQRVL Trigger: TAGGACTCTCTGCATCAGCCTTGTGTGCATCAGGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGCCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | CCTTGGGCTGAGAAACTGGTATTCTCTGGAGGCCTGTaGAGTTTCCTGGAGAGGCAAGGGCTGGGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: PWAEKLVFSGGL*SFLERQGLGRQ Trigger: CTGTCTTCCCAGCCCTTGCCTCTCCAGGAAACTCCACAGGCCTCCAGAGAATACCAGTTTCTCAGCCCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGCTTGCCTCCTTAGGATGGGTGGCTGAGTTTATTACCCAGGGAAAAGGGGCTGGGAGGCTGGCTTaGCCTGCTCCTCATTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QVLASLGWVAEFITQGKGAGRLA*PAPHCL Trigger: CAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGC...CCCTTTTCCCTGGGTAATAAACTCAGCCACCCATCCTAAGGAGGCAAGCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | AGCAACCTGCAGTCTACAGGAAAGGGAGATCAGGTGTaGGGCTGGGCAGGAGAAAGGATGAGCCAGACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SNLQSTGKGDQV*GWAGERMSQTD Trigger: GTCTGTCTGGCTCATCCTTTCTCCTGCCCAGCCTCACACCTGATCTCCCTTTCCTGTAGACTGCAGGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | GAGTATACCAGCAGAGGAAGGAGGCCCCACAGTGACTaGCTCCCCTGGGTCAGAATAATACAGACAGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EYTSRGRRPHSD*LPWVRIIQTGG Trigger: GCCACCTGTCTGTATTATTCTGACCCAGGGGAGTCAGTCACTGTGGGGCCTCCTTCCTCTGCTGGTATACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | CTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTTaGGCTCTGTATTCCATTCCCTGGGGACTTTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLGGWLCLLLIA*ALYSIPWGLSN Trigger: ATTGGAAAGTCCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | CCCTTTGGGCACTTCTCAGTGATGGACCCCTTGGGCTaGGAAACTGGTATTCTCTGGAGGCCTGTGGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PFGHFSVMDPLG*ETGILWRPVEF Trigger: AAACTCCACAGGCCTCCAGAGAATACCAGTTTCTCAGCCCAAGGGGTCCATCACTGAGAAGTGCCCAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | TCCCAGCTCCCTGACTTCCCTTTGGGCACTTCTCAGTaGTGGACCCCTTGGGCTGAGAAACTGGTATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SQLPDFPLGTSQ*WTPWAEKLVFS Trigger: AGAGAATACCAGTTTCTCAGCCCAAGGGGTCCATCACTGAGAAGTGCCCAAAGGGAAGTCAGGGAGCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR GCA 72 bp | GGACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTaGCTGCTCCTCATTGCTTGGGCTCTGTATTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GPPFVVLLGGWL*LLLIAWALYSI Trigger: AATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | GCACTTCTCAGTGATGGACCCCTTGGGCTGAGAAACTaGTATTCTCTGGAGGCCTGTGGAGTTTCCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALLSDGPLGLRN*YSLEACGVSWR Trigger: TCTCCAGGAAACTCCACAGGCCTCCAGAGAATACCAGTTTCTCAGCCCAAGGGGTCCATCACTGAGAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR GCA 72 bp | AGACTTGGAGGTCCATCTGGGCCACTGTTGGTTTTCTaGCATCCCATTCCACTGGGTGGAAAGGGTAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLGGPSGPLLVF*HPIPLGGKGSF Trigger: AAAGCTACCCTTTCCACCCAGTGGAATGGGATGGCAGAAAACCAACAGTGGCCCAGATGGACCTCCAAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | CCTGGACTGGGCTACTACAGAGGAAGAAATGGAGTTTaGAGATACGTCCCTAGCCCATCACCTGACCGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PGLGYYRGRNGV*RYVPSPSPDRF Trigger: GAAACGGTCAGGTGATGGGCTAGGGACGTATCTTCAAACTCCATTTCTTCCTCTGTAGTAGCCCAGTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | CCCACAACGCATGATCAGCAAGAAGTATATTTGGGGTaGATGAGACCAGGGTTCCAAAGTCCTGGACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PTTHDQQEVYLG*MRPGFQSPGLG Trigger: GCCCAGTCCAGGACTTTGGAACCCTGGTCTCATTCACCCCAAATATACTTCTTGCTGATCATGCGTTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR GCA 72 bp | AACTGGACCAATATCACTGTACCACAAGTTCTAACCTaGCCCCTCTACCTTTTCCCTGAGGTGGGAGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NWTNITVPQVLT*PLYLFPEVGEL Trigger: GAGCTCTCCCACCTCAGGGAAAAGGTAGAGGGGGCAGGTTAGAACTTGTGGTACAGTGATATTGGTCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | TGGGATACTCTTGGTGATCAAATTGTAAGGCCTGGGTaGCTCAAGGACCTGCTTTCCTGGGTAGGTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: WDTLGDQIVRPG*LKDLLSWVGGK Trigger: CTTACCACCTACCCAGGAAAGCAGGTCCTTGAGCCACCCAGGCCTTACAATTTGATCACCAAGAGTATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | TTCCACTGGGTGGAAAGGGTAGCTTTTATTGGTAAGTaGGGTGGAGATGTGACACTGTTGCTCCAAGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FHWVERVAFIGK*GGDVTLLLQVG Trigger: CCCCACTTGGAGCAACAGTGTCACATCTCCACCCCACTTACCAATAAAAGCTACCCTTTCCACCCAGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | GGCTTTACACCTGAAAAGCAGACTTGGAGGTCCATCTaGGCCACTGTTGGTTTTCTGCCATCCCATTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: GFTPEKQTWRSI*ATVGFLPSHST Trigger: AGTGGAATGGGATGGCAGAAAACCAACAGTGGCCCAGATGGACCTCCAAGTCTGCTTTTCAGGTGTAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | GAGCTCATGTCTGGCTTTACACCTGAAAAGCAGACTTaGAGGTCCATCTGGGCCACTGTTGGTTTTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ELMSGFTPEKQT*RSIWATVGFLP Trigger: TGGCAGAAAACCAACAGTGGCCCAGATGGACCTCCAAGTCTGCTTTTCAGGTGTAAAGCCAGACATGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | CAGATTTGTCATTTATCTCAACCATCTCTGGTGGCCTaGTTTGGACTCCTCCCCTACTTTCTCCCACGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QICHLSQPSLVA*FGLLPYFLPRR Trigger: CCTGCGTGGGAGAAAGTAGGGGAGGAGTCCAAACCAGGCCACCAGAGATGGTTGAGATAAATGACAAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | CCTAGCCCATCACCTGACCGTTTCGTAGGTCTACATTaGCTTTTGGGTGGTAGAGTGAAGAGTCAGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSPSPDRFVGLH*LLGGRVKSQEE Trigger: TTCCTCCTGACTCTTCACTCTACCACCCAAAAGTCAATGTAGACCTACGAAACGGTCAGGTGATGGGCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | TTCCCTAGGTCAAACATTCACTGGAAGGTCCTTCTGTaGGTCCCCCTTATGAAGAGAACCTCCTCTGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: FPRSNIHWKVLL*VPLMKRTSSAW Trigger: CCATGCAGAGGAGGTTCTCTTCATAAGGGGGACTCACAGAAGGACCTTCCAGTGAATGTTTGACCTAGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGCTTGCCTCCTTAGGATGGGTGGCTGAGTTTATTACCCAGGGAAAAGGGTTCAGACACCTCAGCTaGGTGACAAAGATAGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: QVLASLGWVAEFITQGKGFRHLS*VTKIDG Trigger: TCCATCTATCTTTGTCACCAAGCTGAGGTGTCTGAA...CCCTTTTCCCTGGGTAATAAACTCAGCCACCCATCCTAAGGAGGCAAGCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | CAACGCATGATCAGCAAGAAGTATATTTGGGGTGAATaGGACCAGGGTTCCAAAGTCCTGGACTGGGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: QRMISKKYIWGE*DQGSKVLDWAT Trigger: AGTAGCCCAGTCCAGGACTTTGGAACCCTGGTCTCATTCACCCCAAATATACTTCTTGCTGATCATGCGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | TCTCTCATTTTGGTACCCATTTCCGCCTCGGAAGTGTaGGCTCTTTCAAGGCCCTGCCTTTGTACATTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLILVPISASEV*ALSRPCLCTFR Trigger: TCTGAATGTACAAAGGCAGGGCCTTGAAAGAGCTCACACTTCCGAGGCGGAAATGGGTACCAAAATGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | GCAGCAGGAGGATTCTCCTATCTTGGGAAATCTTGCTaGTCTCTCATTTTGGTACCCATTTCCGCCTCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AAGGFSYLGKSC*SLILVPISASE Trigger: TTCCGAGGCGGAAATGGGTACCAAAATGAGAGATCAGCAAGATTTCCCAAGATAGGAGAATCCTCCTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | ACTTCCACCAGATTTGTCATTTATCTCAACCATCTCTaGTGGCCTGGTTTGGACTCCTCCCCTACTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TSTRFVIYLNHL*WPGLDSSPTFS Trigger: GGAGAAAGTAGGGGAGGAGTCCAAACCAGGCCACCAGAGATGGTTGAGATAAATGACAAATCTGGTGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | ATATTTGGGGTGAATGAGACCAGGGTTCCAAAGTCCTaGACTGGGCTACTACAGAGGAAGAAATGGAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IFGVNETRVPKS*TGLLQRKKWSL Trigger: CAAACTCCATTTCTTCCTCTGTAGTAGCCCAGTCCAGGACTTTGGAACCCTGGTCTCATTCACCCCAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | GTGGACACTAAGGGTTCTTCTGATGTTAAATGTGATTaGTCTCAGGATTTTCAGGGAATCTGGGGCTCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VDTKGSSDVKCD*SQDFQGIWGSW Trigger: CCACGAGCCCCAGATTCCCTGAAAATCCTGAGATCAATCACATTTAACATCAGAAGAACCCTTAGTGTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CCA 72 bp | TCTCCTATCTTGGGAAATCTTGCTGATCTCTCATTTTaGTACCCATTTCCGCCTCGGAAGTGTGAGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPILGNLADLSF*YPFPPRKCELF Trigger: AAAGAGCTCACACTTCCGAGGCGGAAATGGGTACCAAAATGAGAGATCAGCAAGATTTCCCAAGATAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR TCA 72 bp | AAGGCCCTGCCTTTGTACATTCAGAATAAAAATAGATaGTGCTGTTCTCTCCCAGTTCGGCTTCGGAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: KALPLYIQNKNR*CCSLPVRLRNP Trigger: AGGATTCCGAAGCCGAACTGGGAGAGAACAGCATCATCTATTTTTATTCTGAATGTACAAAGGCAGGGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR GCA 72 bp | ATCATTAATATACAGTATTTTCACACACACACACACTaGTCTGAATCAGGTGCCACCACCCTCAGTGTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: IINIQYFHTHTH*SESGATTLSVR Trigger: TCTAACACTGAGGGTGGTGGCACCTGATTCAGAGCAGTGTGTGTGTGTGTGAAAATACTGTATATTAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGCTCGTGGGGCCATGCTCCGTCTGACCTTAGCCCTCTATTGGTGCTTCCCAGGTGGGGCAGCATaGAGAGCGGAGACAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGARGAMLRLTLALYWCFPGGAA*RAETGP Trigger: TGGACCTGTCTCCGCTCTCCATGCTGCCCCACCTGG...GAAGCACCAATAGAGGGCTAAGGTCAGACGGAGCATGGCCCCACGAGCCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGCTCGTGGGGCCATGCTCCGTCTGACCTTAGCCCTCTATTGGTGCTTCCCACCTGGAACTTTATaGGGGGTTCGATCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGARGAMLRLTLALYWCFPPGTL*GVRSAP Trigger: TGGAGCTGATCGAACCCCTCATAAAGTTCCAGGTGG...GAAGCACCAATAGAGGGCTAAGGTCAGACGGAGCATGGCCCCACGAGCCCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGTGGAAACAGGCTCACTACAAAGCAGCCCGGGACCATAAGTTCAAATTGTCCACGCAGCGTTTaGGCCGGCAGGCCTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSSGNRLTTKQPGTISSNCPRSV*AGRPGS Trigger: ACTGCCAGGCCTGCCGGCTCAAACGCTGCGTGGACA...ATTTGAACTTATGGTCCCGGGCTGCTTTGTAGTGAGCCTGTTTCCACTGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGCTCGTGGGGCCATGCTCCGTCTGACCTTAGCCCTCTATTGGTGCTTCCCTCCTTCCTCTTCATaGTCATCTCTCGCTTACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGARGAMLRLTLALYWCFPPSSS*SSLAYA Trigger: AGCGTAAGCGAGAGATGATCATGAAGAGGAAGGAGG...GAAGCACCAATAGAGGGCTAAGGTCAGACGGAGCATGGCCCCACGAGCCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | ACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTTGTGGAGTGCTCCTCATTaGGGCTTCGCAGGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSICCPAGRLALPAPHCLWSAPH*GFAGQP Trigger: TGGCTGACCTGCGAAGCCTCAATGAGGAGCACTCCA...CAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGAGAGGAGGGGTCCCAGTAGCTCCAGGCTTCAGACACCTCAGCTTGGTGGAAGTCGGCATAGGTaGGGTCGTAGGTCTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IEERRGPSSSRLQTPQLGGSRHR*GRRSCG Trigger: ACCACAAGACCTACGACCCCACCTATGCCGACTTCC...ACCAAGCTGAGGTGTCTGAAGCCTGGAGCTACTGGGACCCCTCCTCTCCTCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CAA 72 bp | CCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTaGGGCTCTGTATTCCATTCCCTGGGGACTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PAGRLALPAPHC*GSVFHSLGTFQ Trigger: TTGGAAAGTCCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR GCA 90 bp | ACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTTGATCAGCTCCAGGGTGTaGCCAGCTCTGGAGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: TSICCPAGRLALPAPHCLISSRV*PALETS Trigger: TGATGTCTCCAGAGCTGGGCACACCCTGGAGCTGAT...CAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | CAAGGGACAGGAGCAACCTGCAGTCTACAGGAAAGGGAGATCAGGTGTGAGGCTGCTTCTGGATCATCTTaGCGTAGAGCTGGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGTGATCSLQEREIRCEAASGSS*RRAGGC Trigger: GCAGCCACCAGCTCTACGCCAAGATGATCCAGAAGC...AGCCTCACACCTGATCTCCCTTTCCTGTAGACTGCAGGTTGCTCCTGTCCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CAA 72 bp | AGGAGGAGACGGGACACACTAGGGATGATGGGTAGGTaGTGTACCCTTTGTAGGCAGGGGCAGGAGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRRDTLGMMGR*CTLCRQGQEFS Trigger: TGAGAACTCCTGCCCCTGCCTACAAAGGGTACACAACCTACCCATCATCCCTAGTGTGTCCCGTCTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGGCAGGAGGAGACGGGACACACTAGGGATGATGGGTAGGTTGTGTACCCAATGCAGATGGCCATaGGCAGCACATGTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGGRRRRDTLGMMGRLCTQCRWP*AAHVLP Trigger: AGGAAGAACATGTGCTGCTCATGGCCATCTGCATTG...GGTACACAACCTACCCATCATCCCTAGTGTGTCCCGTCTCCTCCTGCCACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR GCA 90 bp | ACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTTGGCGATAATGTGCTGTTaGTCCTCAGACAGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSICCPAGRLALPAPHCLAIMCC*SSDSLG Trigger: GCCCAAGCTGTCTGAGGAGCAACAGCACATTATCGC...CAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR GCA 90 bp | CAAGGGACAGGAGCAACCTGCAGTCTACAGGAAAGGGAGATCAGGTGTGAGGCTCGGTACTGTTTGGAGTaGTCCTCATTGAGGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QGTGATCSLQEREIRCEARYCLE*SSLRLR Trigger: GCGAAGCCTCAATGAGGAGCACTCCAAACAGTACCG...AGCCTCACACCTGATCTCCCTTTCCTGTAGACTGCAGGTTGCTCCTGTCCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTCTGCCATCCCATTCCACTGGGTGGAAAGGGTAGCTTTTATTGGTAAGTTGAGCCGGCAGGCCTaGCAGTGTCGCCGGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WFSAIPFHWVERVAFIGKLSRQA*QCRRLS Trigger: GGACAACCGGCGACACTGCCAGGCCTGCCGGCTCAA...CTTACCAATAAAAGCTACCCTTTCCACCCAGTGGAATGGGATGGCAGAAAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | ACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTTGAGGTCTGCAGTGTGTTaGATAGGCGGTCCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TSICCPAGRLALPAPHCLRSAVC*IGGPEW Trigger: CCATTCAGGACCGCCTATCCAACACACTGCAGACCT...CAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CAA 72 bp | TGGACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTaGCCTGCTCCTCATTGCTTGGGCTCTGTATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WTSICCPAGRLA*PAPHCLGSVFH Trigger: ATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCTTGCCTCCTTAGGATGGGTGGCTGAGTTTATTACCCAGGGAAAAGGGGTCATAGCGTTGAAGTaGAAGCCCGTGGCTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLASLGWVAEFITQGKGVIALK*KPVARS Trigger: AGACCGAGCCACGGGCTTCCACTTCAACGCTATGAC...CCCTTTTCCCTGGGTAATAAACTCAGCCACCCATCCTAAGGAGGCAAGCACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CAA 72 bp | CTCAAAGGTGGGAACTGCAGGGCTAGGGAGGGCTCCTaGGTTAGTGTGGTAGAGTATTTGGTCATCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKGGNCRAREGS*VSVVEYLVILA Trigger: TGCCAAGATGACCAAATACTCTACCACACTAACCAAGGAGCCCTCCCTAGCCCTGCAGTTCCCACCTTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | ACCTCCATTTGTTGTCCTGCTGGGAGGCTGGCTTTGCCTGCTCCTCATTGCTTGTTAAGCAGGACAATCTaGTCATCAGAGGTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSICCPAGRLALPAPHCLLSRTI*SSEVRS Trigger: GGACCTCACCTCTGATGACCAGATTGTCCTGCTTAA...CAAGCAATGAGGAGCAGGCAAAGCCAGCCTCCCAGCAGGACAACAAATGGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGAGAGGAGGGGTCCCAGTAGCTCCAGGCTTCAGACACCTCAGCTTGGTACATGTTCTTCCTCATaGAGGTTCAGCTTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IEERRGPSSSRLQTPQLGTCSSS*RFSFFS Trigger: GCTGAAGAAGCTGAACCTCCATGAGGAAGAACATGT...ACCAAGCTGAGGTGTCTGAAGCCTGGAGCTACTGGGACCCCTCCTCTCCTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | GCTACTACAGAGGAAGAAATGGAGTTTGAAGATACGTCCCTAGCCCATCACCTGAGTCTCCGGAGAAGCTaGGTGTGGGCCTTGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATTEEEMEFEDTSLAHHLSLRRS*VWALEN Trigger: ATTCTCCAAGGCCCACACTCAGCTTCTCCGGAGACT...CAGGTGATGGGCTAGGGACGTATCTTCAAACTCCATTTCTTCCTCTGTAGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | GACCAGGGTTCCAAAGTCCTGGACTGGGCTACTACAGAGGAAGAAATGGAGTTTGGTTGGAGCGCAACATaGTCACCTCAATGGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DQGSKVLDWATTEEEMEFGWSAT*SPQWHL Trigger: CAAGTGCCATTGAGGTGATCATGTTGCGCTCCAACC...AAACTCCATTTCTTCCTCTGTAGTAGCCCAGTCCAGGACTTTGGAACCCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | CAAGTGCTTGCCTCCTTAGGATGGGTGGCTGAGTTTATTACCCAGGGAAAAGGGTCTTGGCAAAGCCGATaGCCTTTTGGATGCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVLASLGWVAEFITQGKGSWQSR*PFGCCN Trigger: GTTACAGCATCCAAAAGGTCATCGGCTTTGCCAAGA...CCCTTTTCCCTGGGTAATAAACTCAGCCACCCATCCTAAGGAGGCAAGCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | GACCAGGGTTCCAAAGTCCTGGACTGGGCTACTACAGAGGAAGAAATGGAGTTTCACCTCAATGGCACTTaGCTTAAGCAGGACAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DQGSKVLDWATTEEEMEFHLNGT*LKQDNL Trigger: CAGATTGTCCTGCTTAAGTCAAGTGCCATTGAGGTG...AAACTCCATTTCTTCCTCTGTAGTAGCCCAGTCCAGGACTTTGGAACCCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAGTGGAAACAGGCTCACTACAAAGCAGCCCGGGACCATAAGTTCAAATATTTGTAGTCTTGGCTaGCACAGTCCCAGGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: QSSGNRLTTKQPGTISSNICSLG*HSPRTC Trigger: ACATGTCCTGGGACTGTGGCAGCCAAGACTACAAAT...ATTTGAACTTATGGTCCCGGGCTGCTTTGTAGTGAGCCTGTTTCCACTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | CTCGGAAGTGTGAGCTCTTTCAAGGCCCTGCCTTTGTACATTCAGAATAAAAATCTAGCACAAGGGGTGTaGGCTTCATGCTGTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGSVSSFKALPLYIQNKNLAQGV*ASCCSP Trigger: CGGAGAACAGCATGAAGCTCACACCCCTTGTGCTAG...ATTTTTATTCTGAATGTACAAAGGCAGGGCCTTGAAAGAGCTCACACTTCCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | GACCAGGGTTCCAAAGTCCTGGACTGGGCTACTACAGAGGAAGAAATGGAGTTTTCCAAGGTAAAAGACTaGTTGGAGCGCAACATGATC | + |
|
Preference number: 4 (lower is better) Translates to: DQGSKVLDWATTEEEMEFSKVKD*LERNMI Trigger: GATCATGTTGCGCTCCAACCAGTCTTTTACCTTGGA...AAACTCCATTTCTTCCTCTGTAGTAGCCCAGTCCAGGACTTTGGAACCCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CAA 72 bp | GGCTCCTTGGTTAGTGTGGTAGAGTATTTGGTCATCTaGGCAGTGAATGAGTCCATGAGTATACCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLVSVVEYLVI*AVNESMSIPAE Trigger: CTCTGCTGGTATACTCATGGACTCATTCACTGCCAAGATGACCAAATACTCTACCACACTAACCAAGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CAA 72 bp | GCTAGGGAGGGCTCCTTGGTTAGTGTGGTAGAGTATTaGGTCATCTTGGCAGTGAATGAGTCCATGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: AREGSLVSVVEY*VILAVNESMSI Trigger: TATACTCATGGACTCATTCACTGCCAAGATGACCAAATACTCTACCACACTAACCAAGGAGCCCTCCCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CCA 90 bp | AAAACAAACAAACACTTTTGTCTCTCTCTCGGGAAGTCTCTTAGGAAGCTCTTTGCTCCTCAGACAGCTTaGGCCTCAGACTGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTNKHFCLSLGKSLRKLFAPQTA*ASDCPS Trigger: TGAAGGACAGTCTGAGGCCCAAGCTGTCTGAGGAGC...AAAGAGCTTCCTAAGAGACTTCCCGAGAGAGAGACAAAAGTGTTTGTTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR TCA 90 bp | GCTACTACAGAGGAAGAAATGGAGTTTGAAGATACGTCCCTAGCCCATCACCTGCTCTGGAGACATCAGTaGTGTCATATTTGTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATTEEEMEFEDTSLAHHLLWRHQ*CHICSL Trigger: AAGACTACAAATATGACATCACTGATGTCTCCAGAG...CAGGTGATGGGCTAGGGACGTATCTTCAAACTCCATTTCTTCCTCTGTAGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| 3UTR CAA 72 bp | CGAACTAGCTTATCAACTTTCAGACTTTCCCTCCTGTaGAGTAGTAAGCCAGATCAATGTGTTCTGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RTSLSTFRLSLL*SSKPDQCVLLL Trigger: TAGCAGCAGAACACATTGATCTGGCTTACTACTCAACAGGAGGGAAAGTCTGAAAGTTGATAAGCTAGTTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | GCTCGTGGGGCCATGCTCCGTCTGACCTTAGCCCTCTATTGGTGCTTCCAGTGTATGTCCACGCAGCGTTaGAGCCGGCAGGCCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARGAMLRLTLALYWCFQCMSTQR*SRQAWQ Trigger: CTGCCAGGCCTGCCGGCTCAAACGCTGCGTGGACAT...ACACTGGAAGCACCAATAGAGGGCTAAGGTCAGACGGAGCATGGCCCCACGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS CCA 90 bp | TCCTTCATCATGCCAATGTCCACGCAGCGTTTGAGCCGGCAGGCCTaGCAGTGTCGCCGGTTGTCCTTGGTGATGCGGCAATCTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SFIMPMSTQRLSRQA*QCRRLSLVMRQSPL Trigger: CAATGGAGATTGCCGCATCACCAAGGACAACCGGCGACACTGCCAGGCCTGCCGGCTCAAACGCTGCGTGGACATTGGCATGATGAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | GACTCATCTCTTCTGCCTGCCTCCCTTGACACAAGCAGTGGCCCCTTATGGCGGTGTCGCCGGTTGTCCTaGGTGATGCGGCAATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSSLLPASLDTSSGPLWRCRRLS*VMRQSP Trigger: TGGAGATTGCCGCATCACCAAGGACAACCGGCGACA...CCGCCATAAGGGGCCACTGCTTGTGTCAAGGGAGGCAGGCAGAAGAGATGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGGCAGGAGGAGACGGGACACACTAGGGATGATGGGTAGGTTGTGTACCTGGCAGTGTCGCCGGTaGTCCTTGGTGATGCGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TGGRRRRDTLGMMGRLCTWQCRR*SLVMRQ Trigger: TTGCCGCATCACCAAGGACAACCGGCGACACTGCCA...GGTACACAACCTACCCATCATCCCTAGTGTGTCCCGTCTCCTCCTGCCACCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS CCA 90 bp | TGTGGGCCTTGGAGAATAGCTCCCTGTACTTACGTCTGCACGAATTaGAGGCCGGAAGTCCCGGAAGTCGGCATAGGTGGGGTCGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CGPWRIAPCTYVCTN*RPEVPEVGIGGVVG Trigger: ACCTACGACCCCACCTATGCCGACTTCCGGGACTTCCGGCCTCCAATTCGTGCAGACGTAAGTACAGGGAGCTATTCTCCAAGGCCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | GGAGGTCCATCTGGGCCACTGTTGGTTTTCTGCCATCCCATTCCACTGGGTGGATCACAGGTCATAGCGTaGAAGTGGAAGCCCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGPSGPLLVFCHPIPLGGSQVIA*KWKPVA Trigger: AGCCACGGGCTTCCACTTCAACGCTATGACCTGTGA...TCCACCCAGTGGAATGGGATGGCAGAAAACCAACAGTGGCCCAGATGGACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS TCA 90 bp | CTTCCTCATGGAGGTTCAGCTTCTTCAGCCCCACCTGGAACTTTATaGGGGGTTCGATCAGCTCCAGGGTGTGCCCAGCTCTGGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LPHGGSASSAPPGTL*GVRSAPGCAQLWRH Trigger: ATGTCTCCAGAGCTGGGCACACCCTGGAGCTGATCGAACCCCTCATAAAGTTCCAGGTGGGGCTGAAGAAGCTGAACCTCCATGAGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS GCA 90 bp | ATGCTGTTCTCCGGCTGGAAGGAGAGGGAACGGTACTGTTTGGAGTaGTCCTCATTGAGGCTTCGCAGGTCAGCCAGCTTCTGGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: MLFSGWKERERYCLE*SSLRLRRSASFWII Trigger: GATGATCCAGAAGCTGGCTGACCTGCGAAGCCTCAATGAGGAGCACTCCAAACAGTACCGTTCCCTCTCCTTCCAGCCGGAGAACAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | CAAGGGACAGGAGCAACCTGCAGTCTACAGGAAAGGGAGATCAGGTGTGAGGCTATGCGGCAATCTCCATaGAAGGGGCAGGTGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGTGATCSLQEREIRCEAMRQSP*KGQVNR Trigger: CCTGTTCACCTGCCCCTTCAATGGAGATTGCCGCAT...AGCCTCACACCTGATCTCCCTTTCCTGTAGACTGCAGGTTGCTCCTGTCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | GGAGGTCCATCTGGGCCACTGTTGGTTTTCTGCCATCCCATTCCACTGGGTGGAAGGGAACGGTACTGTTaGGAGTGCTCCTCATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGPSGPLLVFCHPIPLGGRERYC*ECSSLR Trigger: CCTCAATGAGGAGCACTCCAAACAGTACCGTTCCCT...TCCACCCAGTGGAATGGGATGGCAGAAAACCAACAGTGGCCCAGATGGACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS CCA 90 bp | CTGAATGGCTTCAACCAGCTTAGCATCCTGTACCCCAGGTCGGTCTaGGGAGACAATGCAGATGGCCATGAGCAGCACATGTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNGFNQLSILYPRSV*GDNADGHEQHMFFL Trigger: GAGGAAGAACATGTGCTGCTCATGGCCATCTGCATTGTCTCCCCAGACCGACCTGGGGTACAGGATGCTAAGCTGGTTGAAGCCATTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS CCA 90 bp | AACACCTCTAGCACAAGGGGTGTGAGCTTCATGCTGTTCTCCGGCTaGAAGGAGAGGGAACGGTACTGTTTGGAGTGCTCCTCATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NTSSTRGVSFMLFSG*KERERYCLECSSLR Trigger: CCTCAATGAGGAGCACTCCAAACAGTACCGTTCCCTCTCCTTCCAGCCGGAGAACAGCATGAAGCTCACACCCCTTGTGCTAGAGGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGCTGGGAAGACAGAGGCTTTCCAGTGCCTGATGCACACAAGGCTGATGTGTACAGATCAGAGTTaGAGGAGGAGTCTCCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ARAGKTEAFQCLMHTRLMCTDQS*RRSLRR Trigger: TCTCCGGAGACTCCTCCTCAAACTCTGATCTGTACA...CATCAGCCTTGTGTGCATCAGGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGCTGGGAAGACAGAGGCTTTCCAGTGCCTGATGCACACAAGGCTGATGAAAGCCGATGACCTTTaGGATGCTGTAACTGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARAGKTEAFQCLMHTRLMKADDL*DAVTDK Trigger: CTTGTCAGTTACAGCATCCAAAAGGTCATCGGCTTT...CATCAGCCTTGTGTGCATCAGGCACTGGAAAGCCTCTGTCTTCCCAGCCCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS CCA 90 bp | CGCAACATGATCACCTCAATGGCACTTGACTTAAGCAGGACAATCTaGTCATCAGAGGTGAGGTCCCTGAAGCCAGGGATCATCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RNMITSMALDLSRTI*SSEVRSLKPGIILA Trigger: TGCCAAGATGATCCCTGGCTTCAGGGACCTCACCTCTGATGACCAGATTGTCCTGCTTAAGTCAAGTGCCATTGAGGTGATCATGTTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTGCCTGCTCCTCATTGCTTGGGCTCTGTATTCCATTCCCTGGGGACTTAAGGTAAAAGACTGGTaGGAGCGCAACATGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: WLCLLLIAWALYSIPWGLKVKDW*ERNMIT Trigger: GGTGATCATGTTGCGCTCCAACCAGTCTTTTACCTT...AAGTCCCCAGGGAATGGAATACAGAGCCCAAGCAATGAGGAGCAGGCAAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS CCA 90 bp | TCTTGGCTGCCACAGTCCCAGGACATGTCATCCAAGGTAAAAGACTaGTTGGAGCGCAACATGATCACCTCAATGGCACTTGACTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWLPQSQDMSSKVKD*LERNMITSMALDLS Trigger: GCTTAAGTCAAGTGCCATTGAGGTGATCATGTTGCGCTCCAACCAGTCTTTTACCTTGGATGACATGTCCTGGGACTGTGGCAGCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS TCA 90 bp | GGTAAAAGACTGGTTGGAGCGCAACATGATCACCTCAATGGCACTTaGCTTAAGCAGGACAATCTGGTCATCAGAGGTGAGGTCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GKRLVGAQHDHLNGT*LKQDNLVIRGEVPE Trigger: TTCAGGGACCTCACCTCTGATGACCAGATTGTCCTGCTTAAGTCAAGTGCCATTGAGGTGATCATGTTGCGCTCCAACCAGTCTTTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | AAAACAAACAAACACTTTTGTCTCTCTCTCGGGAAGTCTCTTAGGAAGCTCTTTCAGGTGAACAGGGCCTaGCGCTTCATGCTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KTNKHFCLSLGKSLRKLFQVNRA*RFMLRL Trigger: CAGGCGGAGCATGAAGCGCAAGGCCCTGTTCACCTG...AAAGAGCTTCCTAAGAGACTTCCCGAGAGAGAGACAAAAGTGTTTGTTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | CTCGGAAGTGTGAGCTCTTTCAAGGCCCTGCCTTTGTACATTCAGAATAAAAATGGCGATAATGTGCTGTaGCTCCTCAGACAGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGSVSSFKALPLYIQNKNGDNVL*LLRQLG Trigger: CCCAAGCTGTCTGAGGAGCAACAGCACATTATCGCC...ATTTTTATTCTGAATGTACAAAGGCAGGGCCTTGAAAGAGCTCACACTTCCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | TCTTTGTCAAATAAACAGCAGTGTCTCCTAACTGAGATCTCAAGGGACAGGAGCGTCATATTTGTAGTCTaGGCTGCCACAGTCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSNKQQCLLTEISRDRSVIFVV*AATVPG Trigger: TCCTGGGACTGTGGCAGCCAAGACTACAAATATGAC...GCTCCTGTCCCTTGAGATCTCAGTTAGGAGACACTGCTGTTTATTTGACAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS-3UTR CAA 90 bp | AAAACAAACAAACACTTTTGTCTCTCTCTCGGGAAGTCTCTTAGGAAGCTCTTTTTGGAGTGCTCCTCATaGAGGCTTCGCAGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KTNKHFCLSLGKSLRKLFLECSS*RLRRSA Trigger: GGCTGACCTGCGAAGCCTCAATGAGGAGCACTCCAA...AAAGAGCTTCCTAAGAGACTTCCCGAGAGAGAGACAAAAGTGTTTGTTTGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS CAA 90 bp | GCCTGGCAGTGTCGCCGGTTGTCCTTGGTGATGCGGCAATCTCCATaGAAGGGGCAGGTGAACAGGGCCTTGCGCTTCATGCTCCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AWQCRRLSLVMRQSP*KGQVNRALRFMLRL Trigger: CAGGCGGAGCATGAAGCGCAAGGCCCTGTTCACCTGCCCCTTCAATGGAGATTGCCGCATCACCAAGGACAACCGGCGACACTGCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS CCA 72 bp | ATGCCAATGTCCACGCAGCGTTTGAGCCGGCAGGCCTaGCAGTGTCGCCGGTTGTCCTTGGTGATGCGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: MPMSTQRLSRQA*QCRRLSLVMRQ Trigger: TTGCCGCATCACCAAGGACAACCGGCGACACTGCCAGGCCTGCCGGCTCAAACGCTGCGTGGACATTGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
||
| CDS CCA 72 bp | GAATTGGAGGCCGGAAGTCCCGGAAGTCGGCATAGGTaGGGTCGTAGGTCTTGTGGTGGGCATCGAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ELEAGSPGSRHR*GRRSCGGHRAG Trigger: TCCTGCTCGATGCCCACCACAAGACCTACGACCCCACCTATGCCGACTTCCGGGACTTCCGGCCTCCAATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CAA 90 bp | GTGTGGGCCTTGGAGAATAGCTCCCTGTACTTACGTCTGCACGAATaGGAGGCCGGAAGTCCCGGAAGTCGGCATAGGTGGGGTCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: VWALENSSLYLRLHE*EAGSPGSRHRWGRR Trigger: CCTACGACCCCACCTATGCCGACTTCCGGGACTTCCGGCCTCCAATTCGTGCAGACGTAAGTACAGGGAGCTATTCTCCAAGGCCCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS TCA 72 bp | GGAGGTTCAGCTTCTTCAGCCCCACCTGGAACTTTATaGGGGGTTCGATCAGCTCCAGGGTGTGCCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GGSASSAPPGTL*GVRSAPGCAQL Trigger: GAGCTGGGCACACCCTGGAGCTGATCGAACCCCTCATAAAGTTCCAGGTGGGGCTGAAGAAGCTGAACCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS GCA 72 bp | TCCGGCTGGAAGGAGAGGGAACGGTACTGTTTGGAGTaGTCCTCATTGAGGCTTCGCAGGTCAGCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SGWKERERYCLE*SSLRLRRSASF Trigger: GAAGCTGGCTGACCTGCGAAGCCTCAATGAGGAGCACTCCAAACAGTACCGTTCCCTCTCCTTCCAGCCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CAA 72 bp | CGGCAATCTCCATTGAAGGGGCAGGTGAACAGGGCCTaGCGCTTCATGCTCCGCCTGAAGAAACCCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RQSPLKGQVNRA*RFMLRLKKPLQ Trigger: CTGCAAGGGTTTCTTCAGGCGGAGCATGAAGCGCAAGGCCCTGTTCACCTGCCCCTTCAATGGAGATTGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023119.15 ENSMUST00000126568.8 |
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| CDS CAA 72 bp | TGTCGCCGGTTGTCCTTGGTGATGCGGCAATCTCCATaGAAGGGGCAGGTGAACAGGGCCTTGCGCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: CRRLSLVMRQSP*KGQVNRALRFM Trigger: CATGAAGCGCAAGGCCCTGTTCACCTGCCCCTTCAATGGAGATTGCCGCATCACCAAGGACAACCGGCGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023119.15 ENSMUST00000126568.8 |
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| CDS CAA 72 bp | CTGTTCTCCGGCTGGAAGGAGAGGGAACGGTACTGTTaGGAGTGCTCCTCATTGAGGCTTCGCAGGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LFSGWKERERYC*ECSSLRLRRSA Trigger: GGCTGACCTGCGAAGCCTCAATGAGGAGCACTCCAAACAGTACCGTTCCCTCTCCTTCCAGCCGGAGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CAA 90 bp | GTAGGTCTTGTGGTGGGCATCGAGCAGGATGGCGATAATGTGCTGTaGCTCCTCAGACAGCTTGGGCCTCAGACTGTCCTTCAAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VGLVVGIEQDGDNVL*LLRQLGPQTVLQGL Trigger: GAGGCCTTGAAGGACAGTCTGAGGCCCAAGCTGTCTGAGGAGCAACAGCACATTATCGCCATCCTGCTCGATGCCCACCACAAGACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CAA 90 bp | AGCTTCATGCTGTTCTCCGGCTGGAAGGAGAGGGAACGGTACTGTTaGGAGTGCTCCTCATTGAGGCTTCGCAGGTCAGCCAGCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SFMLFSGWKERERYC*ECSSLRLRRSASFW Trigger: CCAGAAGCTGGCTGACCTGCGAAGCCTCAATGAGGAGCACTCCAAACAGTACCGTTCCCTCTCCTTCCAGCCGGAGAACAGCATGAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS TCA 72 bp | CCCCAGGTCGGTCTGGGGAGACAATGCAGATGGCCATaGGCAGCACATGTTCTTCCTCATGGAGGTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PQVGLGRQCRWP*AAHVLPHGGSA Trigger: AGCTGAACCTCCATGAGGAAGAACATGTGCTGCTCATGGCCATCTGCATTGTCTCCCCAGACCGACCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS GCA 72 bp | TGGTGGGCATCGAGCAGGATGGCGATAATGTGCTGTTaGTCCTCAGACAGCTTGGGCCTCAGACTGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: WWASSRMAIMCC*SSDSLGLRLSF Trigger: GAAGGACAGTCTGAGGCCCAAGCTGTCTGAGGAGCAACAGCACATTATCGCCATCCTGCTCGATGCCCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CCA 72 bp | AGCACAAGGGGTGTGAGCTTCATGCTGTTCTCCGGCTaGAAGGAGAGGGAACGGTACTGTTTGGAGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: STRGVSFMLFSG*KERERYCLECS Trigger: GGAGCACTCCAAACAGTACCGTTCCCTCTCCTTCCAGCCGGAGAACAGCATGAAGCTCACACCCCTTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CAA 72 bp | GTGGTGGGCATCGAGCAGGATGGCGATAATGTGCTGTaGCTCCTCAGACAGCTTGGGCCTCAGACTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VVGIEQDGDNVL*LLRQLGPQTVL Trigger: AAGGACAGTCTGAGGCCCAAGCTGTCTGAGGAGCAACAGCACATTATCGCCATCCTGCTCGATGCCCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS TCA 72 bp | AGATCTCATTGCCGAACACCTCTAGCACAAGGGGTGTaGGCTTCATGCTGTTCTCCGGCTGGAAGGAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RSHCRTPLAQGV*ASCCSPAGRRG Trigger: CCCTCTCCTTCCAGCCGGAGAACAGCATGAAGCTCACACCCCTTGTGCTAGAGGTGTTCGGCAATGAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CCA 72 bp | TTCAACCAGCTTAGCATCCTGTACCCCAGGTCGGTCTaGGGAGACAATGCAGATGGCCATGAGCAGCACATG | + |
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Preference number: 6 (lower is better) Translates to: FNQLSILYPRSV*GDNADGHEQHM Trigger: CATGTGCTGCTCATGGCCATCTGCATTGTCTCCCCAGACCGACCTGGGGTACAGGATGCTAAGCTGGTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS TCA 72 bp | AGGAGAGGGAACGGTACTGTTTGGAGTGCTCCTCATTaGGGCTTCGCAGGTCAGCCAGCTTCTGGATCATCT | + |
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Preference number: 6 (lower is better) Translates to: RRGNGTVWSAPH*GFAGQPASGSS Trigger: AGATGATCCAGAAGCTGGCTGACCTGCGAAGCCTCAATGAGGAGCACTCCAAACAGTACCGTTCCCTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CCA 72 bp | CGGAGCCTTCTTCATTCAGATCCATCGTGGAAAAGCTaGCCGGTTCCATCATGTCCAGTGAGGGGGTGTACA | + |
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Preference number: 6 (lower is better) Translates to: RSLLHSDPSWKS*PVPSCPVRGCT Trigger: TGTACACCCCCTCACTGGACATGATGGAACCGGCCAGCTTTTCCACGATGGATCTGAATGAAGAAGGCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CAA 72 bp | AAGGAGAGGGAACGGTACTGTTTGGAGTGCTCCTCATaGAGGCTTCGCAGGTCAGCCAGCTTCTGGATCATC | + |
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Preference number: 6 (lower is better) Translates to: KERERYCLECSS*RLRRSASFWII Trigger: GATGATCCAGAAGCTGGCTGACCTGCGAAGCCTCAATGAGGAGCACTCCAAACAGTACCGTTCCCTCTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CAA 90 bp | TGGCTGCCACAGTCCCAGGACATGTCATCCAAGGTAAAAGACTGGTaGGAGCGCAACATGATCACCTCAATGGCACTTGACTTAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: WLPQSQDMSSKVKDW*ERNMITSMALDLSR Trigger: CCTGCTTAAGTCAAGTGCCATTGAGGTGATCATGTTGCGCTCCAACCAGTCTTTTACCTTGGATGACATGTCCTGGGACTGTGGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CCA 72 bp | ATCACCTCAATGGCACTTGACTTAAGCAGGACAATCTaGTCATCAGAGGTGAGGTCCCTGAAGCCAGGGATC | + |
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Preference number: 6 (lower is better) Translates to: ITSMALDLSRTI*SSEVRSLKPGI Trigger: GATCCCTGGCTTCAGGGACCTCACCTCTGATGACCAGATTGTCCTGCTTAAGTCAAGTGCCATTGAGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS TCA 72 bp | CTGGTTGGAGCGCAACATGATCACCTCAATGGCACTTaGCTTAAGCAGGACAATCTGGTCATCAGAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LVGAQHDHLNGT*LKQDNLVIRGE Trigger: CTCACCTCTGATGACCAGATTGTCCTGCTTAAGTCAAGTGCCATTGAGGTGATCATGTTGCGCTCCAACCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CCA 72 bp | CCACAGTCCCAGGACATGTCATCCAAGGTAAAAGACTaGTTGGAGCGCAACATGATCACCTCAATGGCACTT | + |
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Preference number: 6 (lower is better) Translates to: PQSQDMSSKVKD*LERNMITSMAL Trigger: AAGTGCCATTGAGGTGATCATGTTGCGCTCCAACCAGTCTTTTACCTTGGATGACATGTCCTGGGACTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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| CDS CAA 72 bp | CAGTCCCAGGACATGTCATCCAAGGTAAAAGACTGGTaGGAGCGCAACATGATCACCTCAATGGCACTTGAC | + |
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Preference number: 6 (lower is better) Translates to: QSQDMSSKVKDW*ERNMITSMALD Trigger: GTCAAGTGCCATTGAGGTGATCATGTTGCGCTCCAACCAGTCTTTTACCTTGGATGACATGTCCTGGGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023119.15 |
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