Pregenerated sensors for VDAC3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000008892

Ensembl transcript IDs: ENSMUST00000009036.11, ENSMUST00000179233.2

Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR GCA 90 bp	GGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTAACGAGTGTTGTTGCTaGCAGCTGTCCATGCCAGGT	+
Preference number: 4 (lower is better) Translates to: GLGHAGHGVQTGEAGRSFNECCC*QLSMPG Trigger: ACCTGGCATGGACAGCTGGCAGCAACAACACTCGTT...AAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR GCA 90 bp	GGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTAGCCTCCAAACTCAGTaGCATCATTCACGTGAGTAT	+
Preference number: 4 (lower is better) Translates to: GLGHAGHGVQTGEAGRSFSLQTQ*HHSREY Trigger: ATACTCACGTGAATGATGGCACTGAGTTTGGAGGCT...AAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR GCA 90 bp	AAAGGCCATGGAAAAGTGGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAACGAGTGTTGTTGCTaGCAGCTGTCCATGCCAGGT	+
Preference number: 4 (lower is better) Translates to: KGHGKVDWDMQDTVYRPGNECCC*QLSMPG Trigger: ACCTGGCATGGACAGCTGGCAGCAACAACACTCGTT...CCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCCACTTTTCCATGGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR GCA 90 bp	GCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTAACATGACACTACAAAACGAGTGTTGTTaGTGCCAGCTGTCCATGCCA	+
Preference number: 4 (lower is better) Translates to: AGHGVQTGEAGRSFNMTLQNECC*CQLSMP Trigger: TGGCATGGACAGCTGGCAGCAACAACACTCGTTTTG...TAGTGTCATGTTAAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CCA 90 bp	GGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTCCAGTCCAATTAAACTaGCATTGTTTACTTTGGCAG	+
Preference number: 4 (lower is better) Translates to: GLGHAGHGVQTGEAGRSFPVQLN*HCLLWQ Trigger: CTGCCAAAGTAAACAATGCCAGTTTAATTGGACTGG...AAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR TCA 90 bp	CAAAAGGCCATGGAAAAGTGGACTGGGACATGCAGGACACGGTGTACAGACCGGTGTGGCCTCCTGCATTaGAGTTCTTTCCATCTATTA	+
Preference number: 4 (lower is better) Translates to: QKAMEKWTGTCRTRCTDRCGLLH*SSFHLL Trigger: TAATAGATGGAAAGAACTTCAATGCAGGAGGCCACA...CCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCCACTTTTCCATGGCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CCA 90 bp	GCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTAACATGACACTATGGCATTGTTTACTTTaGCAGATAGAGAAGTTCTAC	+
Preference number: 4 (lower is better) Translates to: AGHGVQTGEAGRSFNMTLWHCLL*QIEKFY Trigger: GTAGAACTTCTCTATCTGCCAAAGTAAACAATGCCA...TAGTGTCATGTTAAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CCA 90 bp	GAGACTGATATAACAAAAGGCCATGGAAAAGTGGACTGGGACATGCAGGACACGTGGCATTGTTTACTTTaGCAGATAGAGAAGTTCTAC	+
Preference number: 4 (lower is better) Translates to: ETDITKGHGKVDWDMQDTWHCLL*QIEKFY Trigger: GTAGAACTTCTCTATCTGCCAAAGTAAACAATGCCA...CGTGTCCTGCATGTCCCAGTCCACTTTTCCATGGCCTTTTGTTATATCAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR GCA 90 bp	GACACTACGTTGTTGCTGAGGAACATATTTAAATTAACTCTGCAGAACTCAACTAGCCTCCAAACTCAGTaGCATCATTCACGTGAGTAT	+
Preference number: 4 (lower is better) Translates to: DTTLLLRNIFKLTLQNSTSLQTQ*HHSREY Trigger: ATACTCACGTGAATGATGGCACTGAGTTTGGAGGCT...AGTTGAGTTCTGCAGAGTTAATTTAAATATGTTCCTCAGCAACAACGTAGTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTGCTGACAGGGTCAGTTaGACTCCTGGTCGGAGGGTC	+
Preference number: 5 (lower is better) Translates to: GLGHAGHGVQTGEAGRSFADRVS*TPGRRV Trigger: GACCCTCCGACCAGGAGTCAAACTGACCCTGTCAGC...AAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTCCAAAACGAGTGTTGTaGCTGCCAGCTGTCCATGCC	+
Preference number: 5 (lower is better) Translates to: GLGHAGHGVQTGEAGRSFPKRVL*LPAVHA Trigger: GGCATGGACAGCTGGCAGCAACAACACTCGTTTTGG...AAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTAACATGACACTAGCTGACAGGGTCAGTTaGACTCCTGGTCGGAGGGTC	+
Preference number: 5 (lower is better) Translates to: AGHGVQTGEAGRSFNMTLADRVS*TPGRRV Trigger: GACCCTCCGACCAGGAGTCAAACTGACCCTGTCAGC...TAGTGTCATGTTAAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	AGTGGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCAATCCCAATCCAACCTaGTGGCCTCCTGCATTGAAG	+
Preference number: 5 (lower is better) Translates to: SGLGHAGHGVQTGEAGRSNPNPT*WPPALK Trigger: CTTCAATGCAGGAGGCCACAAGGTTGGATTGGGATT...GGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTCCAAACCCATACCCTTaGTTAAAGACATCCTTGGCA	+
Preference number: 5 (lower is better) Translates to: GLGHAGHGVQTGEAGRSFPNPYP*LKTSLA Trigger: TGCCAAGGATGTCTTTAACAAAGGGTATGGGTTTGG...AAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTAACATGACACTAAATCCCAATCCAACCTaGTGGCCTCCTGCATTGAAG	+
Preference number: 5 (lower is better) Translates to: AGHGVQTGEAGRSFNMTLNPNPT*WPPALK Trigger: CTTCAATGCAGGAGGCCACAAGGTTGGATTGGGATT...TAGTGTCATGTTAAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	AAAGGCCATGGAAAAGTGGACTGGGACATGCAGGACACGGTGTACAGACCGGGGGTCTGTATTCCACTTTaGGGTGAAGGTGAGCCCATA	+
Preference number: 5 (lower is better) Translates to: KGHGKVDWDMQDTVYRPGVCIPL*GEGEPI Trigger: TATGGGCTCACCTTCACCCAAAAGTGGAATACAGAC...CCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCCACTTTTCCATGGCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTCTGGCATTGTTTACTTaGGCAGATAGAGAAGTTCTA	+
Preference number: 5 (lower is better) Translates to: GLGHAGHGVQTGEAGRSFLALFT*ADREVL Trigger: TAGAACTTCTCTATCTGCCAAAGTAAACAATGCCAG...AAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GGACTGGGACATGCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTCCAATTAAACTGGCATaGTTTACTTTGGCAGATAGA	+
Preference number: 5 (lower is better) Translates to: GLGHAGHGVQTGEAGRSFPIKLA*FTLADR Trigger: TCTATCTGCCAAAGTAAACAATGCCAGTTTAATTGG...AAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GAGACTGATATAACAAAAGGCCATGGAAAAGTGGACTGGGACATGCAGGACACGCCAAAACGAGTGTTGTaGCTGCCAGCTGTCCATGCC	+
Preference number: 5 (lower is better) Translates to: ETDITKGHGKVDWDMQDTPKRVL*LPAVHA Trigger: GGCATGGACAGCTGGCAGCAACAACACTCGTTTTGG...CGTGTCCTGCATGTCCCAGTCCACTTTTCCATGGCCTTTTGTTATATCAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	AAAGGCCATGGAAAAGTGGACTGGGACATGCAGGACACGGTGTACAGACCGGGGCTGGCATTGTTTACTTaGGCAGATAGAGAAGTTCTA	+
Preference number: 5 (lower is better) Translates to: KGHGKVDWDMQDTVYRPGLALFT*ADREVL Trigger: TAGAACTTCTCTATCTGCCAAAGTAAACAATGCCAG...CCCCGGTCTGTACACCGTGTCCTGCATGTCCCAGTCCACTTTTCCATGGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GCAGGACACGGTGTACAGACCGGGGAGGCAGGTCGCTCCTTTAACATGACACTACCAATTAAACTGGCATaGTTTACTTTGGCAGATAGA	+
Preference number: 5 (lower is better) Translates to: AGHGVQTGEAGRSFNMTLPIKLA*FTLADR Trigger: TCTATCTGCCAAAGTAAACAATGCCAGTTTAATTGG...TAGTGTCATGTTAAAGGAGCGACCTGCCTCCCCGGTCTGTACACCGTGTCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GAGACTGATATAACAAAAGGCCATGGAAAAGTGGACTGGGACATGCAGGACACGGTTTTCAGATCTATCTaGACCATGCCAAACCCATAC	+
Preference number: 5 (lower is better) Translates to: ETDITKGHGKVDWDMQDTVFRSI*TMPNPY Trigger: GTATGGGTTTGGCATGGTCAAGATAGATCTGAAAAC...CGTGTCCTGCATGTCCCAGTCCACTTTTCCATGGCCTTTTGTTATATCAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GACACTACGTTGTTGCTGAGGAACATATTTAAATTAACTCTGCAGAACTCAACTGTCTGTATTCCACTTTaGGGTGAAGGTGAGCCCATA	+
Preference number: 5 (lower is better) Translates to: DTTLLLRNIFKLTLQNSTVCIPL*GEGEPI Trigger: TATGGGCTCACCTTCACCCAAAAGTGGAATACAGAC...AGTTGAGTTCTGCAGAGTTAATTTAAATATGTTCCTCAGCAACAACGTAGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GACACTACGTTGTTGCTGAGGAACATATTTAAATTAACTCTGCAGAACTCAACTCCAAACCCATACCCTTaGTTAAAGACATCCTTGGCA	+
Preference number: 5 (lower is better) Translates to: DTTLLLRNIFKLTLQNSTPNPYP*LKTSLA Trigger: TGCCAAGGATGTCTTTAACAAAGGGTATGGGTTTGG...AGTTGAGTTCTGCAGAGTTAATTTAAATATGTTCCTCAGCAACAACGTAGTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GACACTACGTTGTTGCTGAGGAACATATTTAAATTAACTCTGCAGAACTCAACTGTTTTCAGATCTATCTaGACCATGCCAAACCCATAC	+
Preference number: 5 (lower is better) Translates to: DTTLLLRNIFKLTLQNSTVFRSI*TMPNPY Trigger: GTATGGGTTTGGCATGGTCAAGATAGATCTGAAAAC...AGTTGAGTTCTGCAGAGTTAATTTAAATATGTTCCTCAGCAACAACGTAGTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2
CDS-3UTR CAA 90 bp	GACACTACGTTGTTGCTGAGGAACATATTTAAATTAACTCTGCAGAACTCAACTACTCCACTACAAGACTaGGTTTTCAGATCTATCTTG	+
Preference number: 5 (lower is better) Translates to: DTTLLLRNIFKLTLQNSTTPLQD*VFRSIL Trigger: CAAGATAGATCTGAAAACCAAGTCTTGTAGTGGAGT...AGTTGAGTTCTGCAGAGTTAATTTAAATATGTTCCTCAGCAACAACGTAGTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009036.11 ENSMUST00000179233.2