Pregenerated sensors for VCPIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045210Ensembl transcript IDs: ENSMUST00000057438.7
Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGAGGCAGGCAGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTaGGCTCCAGGCCAGCCAAGGCTACATAGTAGTAAGACCATGTCT | + |
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Preference number: 1 (lower is better) Translates to: RRQADLFLRPAWSIE*APGQPRLHSSKTMS Trigger: AGACATGGTCTTACTACTATGTAGCCTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCTGCCTGCCTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CCA 90 bp | TTCACAGTGCCTGTTGCTTCAGCACTACTCTCAGCATTGTACCTATaGTCAACAGAACAGAGGTACAACTGCAAACCTCAAGGTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: FTVPVASALLSALYL*STEQRYNCKPQGYS Trigger: GCTGTAACCTTGAGGTTTGCAGTTGTACCTCTGTTCTGTTGACCATAGGTACAATGCTGAGAGTAGTGCTGAAGCAACAGGCACTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR TCA 90 bp | CCTCCCAGCTCTATTGATAAATGCCATTATCATCCTTCTTGGGAGTaGTACAGAGGTTACACAGTAGGTTGTATGCTTGACTTGGACCCG | + |
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Preference number: 1 (lower is better) Translates to: PPSSIDKCHYHPSWE*YRGYTVGCMLDLDP Trigger: CGGGTCCAAGTCAAGCATACAACCTACTGTGTAACCTCTGTATCACTCCCAAGAAGGATGATAATGGCATTTATCAATAGAGCTGGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CCA 90 bp | TGTCTTGTTTCCTTCAACTTGAGCAATTGTTCATTACCAGCCTTCTaGACATACACTACCTTTAACTGCCTGGACTTCGGGTCATCAACT | + |
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Preference number: 1 (lower is better) Translates to: CLVSFNLSNCSLPAF*TYTTFNCLDFGSST Trigger: AGTTGATGACCCGAAGTCCAGGCAGTTAAAGGTAGTGTATGTCCAGAAGGCTGGTAATGAACAATTGCTCAAGTTGAAGGAAACAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR GCA 90 bp | AGCAATTGTTCATTACCAGCCTTCTGGACATACACTACCTTTAACTaGCTGGACTTCGGGTCATCAACTCAAACTTGGTATGGTTACAAA | + |
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Preference number: 1 (lower is better) Translates to: SNCSLPAFWTYTTFN*LDFGSSTQTWYGYK Trigger: TTTGTAACCATACCAAGTTTGAGTTGATGACCCGAAGTCCAGGCAGTTAAAGGTAGTGTATGTCCAGAAGGCTGGTAATGAACAATTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CCA 90 bp | ATTGTTCATTACCAGCCTTCTGGACATACACTACCTTTAACTGCCTaGACTTCGGGTCATCAACTCAAACTTGGTATGGTTACAAAATGG | + |
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Preference number: 1 (lower is better) Translates to: IVHYQPSGHTLPLTA*TSGHQLKLGMVTKW Trigger: CCATTTTGTAACCATACCAAGTTTGAGTTGATGACCCGAAGTCCAGGCAGTTAAAGGTAGTGTATGTCCAGAAGGCTGGTAATGAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR TCA 90 bp | GAGCACACAACTGGCCATATCTCAGACCAACTAACTGAATCACACTaGTTTTATCATACTAGGGTAGATATTTCTTCCCAAGTTTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: EHTTGHISDQLTESH*FYHTRVDISSQVCS Trigger: TGAGCAAACTTGGGAAGAAATATCTACCCTAGTATGATAAAATCAGTGTGATTCAGTTAGTTGGTCTGAGATATGGCCAGTTGTGTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR GCA 90 bp | AGTCAAACAAACCTGAAAATATTGATAAGCTTTTCAGTCCTTTATTaGTCTACAACAGGCATAAAGGCTCCAGGAGGGATTTCTGCATTC | + |
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Preference number: 1 (lower is better) Translates to: SQTNLKILISFSVLY*STTGIKAPGGISAF Trigger: GAATGCAGAAATCCCTCCTGGAGCCTTTATGCCTGTTGTAGAGCAATAAAGGACTGAAAAGCTTATCAATATTTTCAGGTTTGTTTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR TCA 90 bp | GAATGTTTATCTTCTTTATTGACTGAAGTTTTGAGAGCTCTATCTTaGTGGTATATGGACAATGGCATGCACACACACAGAAGACCTCAA | + |
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Preference number: 1 (lower is better) Translates to: ECLSSLLTEVLRALS*WYMDNGMHTHRRPQ Trigger: TTGAGGTCTTCTGTGTGTGTGCATGCCATTGTCCATATACCATCAAGATAGAGCTCTCAAAACTTCAGTCAATAAAGAAGATAAACATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR TCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGCTATTGTGCTGCCCTaGCATAGCACAGTGGTATCA | + |
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Preference number: 2 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGAIVLP*HSTVVS Trigger: TGATACCACTGTGCTATGTCAGGGCAGCACAATAGC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGGGTGGAAGATGAAATaGCTAGATAGGCTTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGGWKMK*LDRLVL Trigger: AAGAACAAGCCTATCTAGCCATTTCATCTTCCACCC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACTCTAGTCCCAACACTTaGGAGACGGAGGCAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: WAFKGSIAHLNHKAQKANSSPNT*ETEAGR Trigger: TCTGCCTGCCTCCGTCTCCCAAGTGTTGGGACTAGA...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACCAGCCCTGGCTGTCCTaGTACTCACTCTGTAGACGA | + |
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Preference number: 2 (lower is better) Translates to: WAFKGSIAHLNHKAQKANQPWLS*YSLCRR Trigger: TCGTCTACAGAGTGAGTACCAGGACAGCCAGGGCTG...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCTTCAATTCTGGCCTGTaGAGAAACCAAACATTTAAC | + |
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Preference number: 2 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGFNSGL*RNQTFN Trigger: GTTAAATGTTTGGTTTCTGCACAGGCCAGAATTGAA...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCATGTCTAACAGCTTGTaGCTTACAGATAATAGCATC | + |
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Preference number: 2 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGMSNSL*LTDNSI Trigger: GATGCTATTATCTGTAAGGCACAAGCTGTTAGACAT...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCCCTGACATAGCACAGTaGTATCACAATGGTAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGPDIAQ*YHNGKN Trigger: ATTTTTACCATTGTGATACCACTGTGCTATGTCAGG...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACCTGCCTCCCAAGTGCTaGAATAAAAGGCGTGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: WAFKGSIAHLNHKAQKANLPPKC*NKRRVP Trigger: TGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAG...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACCACAAGCTATTGTGCTaGCCTGACATAGCACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: WAFKGSIAHLNHKAQKANHKLLC*PDIAQW Trigger: CCACTGTGCTATGTCAGGGCAGCACAATAGCTTGTG...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACGGCGTGTGCCACCACTaGCTGGCCATAAGTTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: WAFKGSIAHLNHKAQKANGVCHH*LAISFK Trigger: TTTAAAACTTATGGCCAGGCAGTGGTGGCACACGCC...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAAATCCGCACGTCTCTaGCTCCCAAGTGCTGGAATA | + |
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Preference number: 2 (lower is better) Translates to: WAFKGSIAHLNHKAQKANKSARL*LPSAGI Trigger: TATTCCAGCACTTGGGAGGCAGAGACGTGCGGATTT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGTTTCCTCTTCAATTCTaGCCTGTGCAGAAACCAAAC | + |
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Preference number: 2 (lower is better) Translates to: RSLFKASLVYRVGSRPAKFPLQF*PVQKPN Trigger: GTTTGGTTTCTGCACAGGCCAGAATTGAAGAGGAAA...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR TCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGGAGTATCTCAGTGGCTaGCTAAGCCAAAATAATAGT | + |
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Preference number: 2 (lower is better) Translates to: RSLFKASLVYRVGSRPAKEYLSG*LSQNNS Trigger: ACTATTATTTTGGCTTAGTCAGCCACTGAGATACTC...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACGTCTCTAGCCAGGCATaGTATAGTATGCCTTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: WAFKGSIAHLNHKAQKANVSSQA*YSMPSS Trigger: ACTAGAAGGCATACTATACCATGCCTGGCTAGAGAC...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CAA 90 bp | CAAGTTTGTGACTGTAGTCTCAGCATTCTGAGTTCACAGTGCCTGTaGCTTCAGCACTACTCTCAGCATTGTACCTATGGTCAACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: QVCDCSLSILSSQCL*LQHYSQHCTYGQQN Trigger: GTTCTGTTGACCATAGGTACAATGCTGAGAGTAGTGCTGAAGCAACAGGCACTGTGAACTCAGAATGCTGAGACTACAGTCACAAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACTCAAATACTGTACAGTaGTGTGTGCTCAAAAACACT | + |
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Preference number: 2 (lower is better) Translates to: WAFKGSIAHLNHKAQKANSNTVQ*CVLKNT Trigger: AGTGTTTTTGAGCACACATCACTGTACAGTATTTGA...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAATTGCAAACAGTTCTaGATCTGTTACATGTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: WAFKGSIAHLNHKAQKANNCKQF*ICYMCK Trigger: TTTGCACATGTAACAGATGCAGAACTGTTTGCAATT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGACTACTCAAGTTATGTaGCCCAGCCAACAAATATTA | + |
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Preference number: 2 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLTTQVM*PSQQIL Trigger: TAATATTTGTTGGCTGGGCCACATAACTTGAGTAGT...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CAA 90 bp | GGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTaGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GKLEINILMKCRTAT*KTMCTNCHFLFNSG Trigger: GCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAATGCCAATCACACACTTaGTATCATGCACTGAATAAC | + |
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Preference number: 2 (lower is better) Translates to: SGKLEINILMKCRTATLKCQSHT*YHALNN Trigger: GTTATTCAGTGCATGATAGCAAGTGTGTGATTGGCA...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAAACAAAGAACTTCCAATaGACCACATATCTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SGKLEINILMKCRTATLKTKNFQ*TTYLEE Trigger: TTCTTCCAGATATGTGGTTCATTGGAAGTTCTTTGT...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAAAATGAACCACATATCTaGAAGAAACCCTTTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SGKLEINILMKCRTATLKNEPHI*KKPFQK Trigger: CTTTTGAAAGGGTTTCTTCCAGATATGTGGTTCATT...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CCA 72 bp | CCCTGGCTGTCCTGGTACTCACTCTGTAGACGAGGCTaGTCTCGAACTAAGAAATCCGCACGTCTCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PWLSWYSLCRRG*SRTKKSARLCL Trigger: GAGGCAGAGACGTGCGGATTTCTTAGTTCGAGACCAGCCTCGTCTACAGAGTGAGTACCAGGACAGCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CCA 72 bp | CCTCCTTTTTCGAGACAGGGTTTCTCTGTACAGCCCTaGCTGTCCTGGTACTCACTCTGTAGACGAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: PPFSRQGFSVQP*LSWYSLCRRGW Trigger: CCAGCCTCGTCTACAGAGTGAGTACCAGGACAGCCAGGGCTGTACAGAGAAACCCTGTCTCGAAAAAGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CAA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCTGTAGGACGGCTACCTaGAAAACAATGTGTACAAAC | + |
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Preference number: 3 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGCRTAT*KTMCTN Trigger: GTTTGTACACATTGTTTTCAAGGTAGCCGTCCTACA...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CCA 72 bp | GCAGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTaGGCTCCAGGCCAGCCAAGGCTACATAGTAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: ADLFLRPAWSIE*APGQPRLHSSK Trigger: CTTACTACTATGTAGCCTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CAA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGAGAGATAGCCGGGCTTaGAATGCTCTAAGAGATTAT | + |
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Preference number: 3 (lower is better) Translates to: RSLFKASLVYRVGSRPAKRDSRA*NALRDY Trigger: ATAATCTCTTAGAGCATTCAAAGCCCGGCTATCTCT...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR GCA 72 bp | GTTTGTGACTGTAGTCTCAGCATTCTGAGTTCACAGTaGCTGTTGCTTCAGCACTACTCTCAGCATTGTACC | + |
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Preference number: 3 (lower is better) Translates to: VCDCSLSILSSQ*LLLQHYSQHCT Trigger: GGTACAATGCTGAGAGTAGTGCTGAAGCAACAGGCACTGTGAACTCAGAATGCTGAGACTACAGTCACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR GCA 72 bp | GCATTGTACCTATGGTCAACAGAACAGAGGTACAACTaGAAACCTCAAGGTTACAGCAGCTTTATGGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: ALYLWSTEQRYN*KPQGYSSFMGL Trigger: AAGGCCCATAAAGCTGCTGTAACCTTGAGGTTTGCAGTTGTACCTCTGTTCTGTTGACCATAGGTACAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CCA 72 bp | TACCAGCCTTCTGGACATACACTACCTTTAACTGCCTaGACTTCGGGTCATCAACTCAAACTTGGTATGGTT | + |
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Preference number: 3 (lower is better) Translates to: YQPSGHTLPLTA*TSGHQLKLGMV Trigger: AACCATACCAAGTTTGAGTTGATGACCCGAAGTCCAGGCAGTTAAAGGTAGTGTATGTCCAGAAGGCTGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CCA 72 bp | CCTGTTGCTTCAGCACTACTCTCAGCATTGTACCTATaGTCAACAGAACAGAGGTACAACTGCAAACCTCAA | + |
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Preference number: 3 (lower is better) Translates to: PVASALLSALYL*STEQRYNCKPQ Trigger: TTGAGGTTTGCAGTTGTACCTCTGTTCTGTTGACCATAGGTACAATGCTGAGAGTAGTGCTGAAGCAACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR GCA 72 bp | CAGAGCCAGCCTGGGCAGCAGTATATTAAAAGCTATTaGCAATCACACACTTGCTATCATGCACTGAATAAC | + |
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Preference number: 3 (lower is better) Translates to: QSQPGQQYIKSY*QSHTCYHALNN Trigger: GTTATTCAGTGCATGATAGCAAGTGTGTGATTGGCAATAGCTTTTAATATACTGCTGCCCAGGCTGGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR GCA 72 bp | TCATTACCAGCCTTCTGGACATACACTACCTTTAACTaGCTGGACTTCGGGTCATCAACTCAAACTTGGTAT | + |
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Preference number: 3 (lower is better) Translates to: SLPAFWTYTTFN*LDFGSSTQTWY Trigger: ATACCAAGTTTGAGTTGATGACCCGAAGTCCAGGCAGTTAAAGGTAGTGTATGTCCAGAAGGCTGGTAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACTCTGTCAAGATATTTTaGCCAACAATAGCTGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: WAFKGSIAHLNHKAQKANSVKIF*PTIAVS Trigger: AGAGACAGCTATTGTTGGCAAAAATATCTTGACAGA...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACCTTGTTTCCTTCAACTaGAGCAATTGTTCATTACCA | + |
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Preference number: 3 (lower is better) Translates to: WAFKGSIAHLNHKAQKANLVSFN*SNCSLP Trigger: TGGTAATGAACAATTGCTCAAGTTGAAGGAAACAAG...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR CCA 72 bp | TTTAATAGAGAGATAAAATTAGTCTCTAGCCAGGCATaGTATAGTATGCCTTCTAGTCCCAACACTTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: FNREIKLVSSQA*YSMPSSPNTWE Trigger: CTCCCAAGTGTTGGGACTAGAAGGCATACTATACCATGCCTGGCTAGAGACTAATTTTATCTCTCTATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR TCA 72 bp | TCTATTGATAAATGCCATTATCATCCTTCTTGGGAGTaGTACAGAGGTTACACAGTAGGTTGTATGCTTGAC | + |
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Preference number: 3 (lower is better) Translates to: SIDKCHYHPSWE*YRGYTVGCMLD Trigger: GTCAAGCATACAACCTACTGTGTAACCTCTGTATCACTCCCAAGAAGGATGATAATGGCATTTATCAATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR TCA 72 bp | TCTTCTTTATTGACTGAAGTTTTGAGAGCTCTATCTTaGTGGTATATGGACAATGGCATGCACACACACAGA | + |
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Preference number: 3 (lower is better) Translates to: SSLLTEVLRALS*WYMDNGMHTHR Trigger: TCTGTGTGTGTGCATGCCATTGTCCATATACCATCAAGATAGAGCTCTCAAAACTTCAGTCAATAAAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| 3UTR TCA 72 bp | ATACCAAGCCACAGAAGAGCATCTGTTAAAGCAGGGTaGTTATATAATTTATTTGACACAGTACATTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IPSHRRASVKAG*LYNLFDTVHFL Trigger: CAGAAAATGTACTGTGTCAAATAAATTATATAATCACCCTGCTTTAACAGATGCTCTTCTGTGGCTTGGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| 3UTR TCA 72 bp | AGGCTTAAAAATAAATCAAAGTGGACAGTTGAGTGGTaGGCTATGAGGACTTTACTGCTGTTTTCTATATTT | + |
|
Preference number: 3 (lower is better) Translates to: RLKNKSKWTVEW*AMRTLLLFSIF Trigger: AAATATAGAAAACAGCAGTAAAGTCCTCATAGCTCACCACTCAACTGTCCACTTTGATTTATTTTTAAGCCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| 3UTR GCA 72 bp | TATAAGCAAATGCTAATGGTCTACTGGAGTAAACTATaGATCCAAACTCAAGTGAAGCTGACAAAAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YKQMLMVYWSKL*IQTQVKLTKRK Trigger: TTTTCTTTTTGTCAGCTTCACTTGAGTTTGGATGCATAGTTTACTCCAGTAGACCATTAGCATTTGCTTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGGCGCGCCTGGCACTTaGGATCCGGGCAACTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGGAPGT*DPGNSR Trigger: CCGGGAGTTGCCCGGATCCCAAGTGCCAGGCGCGCC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCAGCTGTTGCTGCTCGTaGCGCTGTCCGCACTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGSCCCS*RCPHSV Trigger: TACCGAGTGCGGACAGCGGCACGAGCAGCAACAGCT...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGCGGTACACTCGATGCTaGCAGAACCCGAGGCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKRYTRC*QNPRPG Trigger: TCCCGGCCTCGGGTTCTGTCAGCATCGAGTGTACCG...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGAGAGACGACGAAGTCTaGGGAGCCTCAGGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKRDDEV*GASGGG Trigger: GCCTCCCCCTGAGGCTCCGCAGACTTCGTCGTCTCT...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGACTCCCAGCAGCTGTTaGTGCTCGTGCCGCTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKTPSSC*CSCRCP Trigger: CGGACAGCGGCACGAGCAGCAACAGCTGCTGGGAGT...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGCCCTAGACACAGCATaGACTAGGCAGTGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGALDTA*TRQCPS Trigger: GGATGGACACTGCCTAGTGCATGCTGTGTCTAGGGC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCCACTCAGAAGGGACATaGAGTTCAGAAAGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGHSEGT*SSERAP Trigger: TGGTGCCCTTTCTGAACTTCATGTCCCTTCTGAGTG...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGTTCCGCAGCAGATTGTaGAGCACTACGTCCGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKFRSRL*STTSGS Trigger: CGACCCGGACGTAGTGCTGCACAATCTGCTGCGGAA...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCCCTTGTGGCAAATGCTaGTCCCAGTACATCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGPCGKC*SQYICY Trigger: GTAGCAGATGTACTGGGAGCAGCATTTGCCACAAGG...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGTGTCCCGGAGAAGCTTaGCCCGGCCCGTTTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKCPGEA*PGPFVC Trigger: ACAAACAAACGGGCCGGGCCAAGCTTCTCCGGGACA...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGGCCTCAACTGCCCATaGGTACTTTTTGCCAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGGLNCP*VLFAKL Trigger: TAACTTGGCAAAAAGTACTCATGGGCAGTTGAGGCC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGGGTGGCAGGTGCAGATaGTGGCCCATCACGAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKGGRCR*WPITNS Trigger: ACTATTCGTGATGGGCCATCATCTGCACCTGCCACC...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGGGCAGCCCCCTTTATaGCTACCAAGGGAATATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGGQPPL*LPREYN Trigger: ATTATATTCCCTTGGTAGGCATAAAGGGGGCTGCCC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGTAATTCTGTCACCGTaGTGTAAAGGAACTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGVILSP*CKGTGS Trigger: GGAGCCAGTTCCTTTACAGCACGGTGACAGAATTAC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGTGTGTTGACGTGCTCTaGTTCGATGAGGAAGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKCVDVL*FDEEGP Trigger: CGGGCCTTCCTCATCGAACCAGAGCACGTCAACACA...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGGTGTGCAGCAGTGGATaGACCACCTTCTGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKVCSSG*TTFCSS Trigger: GGAAGAGCAGAAGGTGGTCCATCCACTGCTGCACAC...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGGTAACTTCCTCAGGCTaGACTCCTATCACCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKVTSSG*TPITPV Trigger: GACTGGGGTGATAGGAGTTCAGCCTGAGGAAGTTAC...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCTTGTCAGCTTGCTCCTaGAGTTCCTTAGATGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGLSACS*SSLDDS Trigger: ACTGTCATCTAAGGAACTTCAGGAGCAAGCTGACAA...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGCCATCCCCATCCACATaGACTGGGATGAGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKPSPST*TGMRHS Trigger: AGAATGCCTCATCCCAGTGCATGTGGATGGGGATGG...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGGAAAGATCAGATGGTaGTTGCTCTGCACTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGGKIRW*LLCTLI Trigger: GATCAAAGTGCAGAGCAAGCACCATCTGATCTTTCC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAAGAAGAGGCGCGCCTaGCACTTGGGATCCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANKKRRA*HLGSGQ Trigger: TTGCCCGGATCCCAAGTGCCAGGCGCGCCTCTTCTT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCATTTGCAGTGGTAGTTaGAGAGGCCCATCACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGICSGS*RGPSPL Trigger: TAAAGGTGATGGGCCTCTCCAACTACCACTGCAAAT...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCCTGAAGTTCCTTAGATaGCAGTTTACCAGTAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGLKFLR*QFTSNS Trigger: GCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAG...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACGTTCCGTGTTCTTCTTaGGAGCCCCCGTCACTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANVPCSS*EPPSLR Trigger: TCGGAGTGACGGGGGCTCCCAAGAAGAACACGGAAC...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCTTGTCCATTGAAGCCTaGATAGAAGAAACCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGLSIEA*IEETIS Trigger: GGAAATGGTTTCTTCTATTCAGGCTTCAATGGACAA...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACTCCTCGAGCGTGTCGTaGAAATACAGGAGGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANSSSVS*KYRRLP Trigger: CGGAAGCCTCCTGTATTTGCACGACACGCTCGAGGA...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCTCTGTTTTCCGTTTCTaGATCACAGAAGCTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGSVFRF*ITEACS Trigger: AGAACAAGCTTCTGTGATGCAGAAACGGAAAACAGA...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGCAACCAAACTAGGATaGATACCATGTTTGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGATKLG*IPCLSI Trigger: TATGGACAAACATGGTATCCATCCTAGTTTGGTTGC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGCGCACAGATGAGCCATaGCACCAATTACAAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKRTDEP*HQLQAV Trigger: AACAGCTTGTAATTGGTGCCATGGCTCATCTGTGCG...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACCTGAGTGTGCAGCAGTaGATGGACCACCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANLSVQQ*MDHLLL Trigger: GAGCAGAAGGTGGTCCATCCACTGCTGCACACTCAG...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGCCACATGCACTGGGATaGGGCATTCTTGACTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKPHALG*GILDFY Trigger: ATAAAAGTCAAGAATGCCTCATCCCAGTGCATGTGG...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGGTGAGTAGGGAGCCTTaGTGGGGGTGGCAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLVSREP*WGWQVQ Trigger: CTGCACCTGCCACCCCCACCAAGGCTCCCTACTCAC...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGAGCTTCTCATGCCGCTaGGGGAATCTAAAAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKSFSCR*GNLKEL Trigger: TAATTCTTTTAGATTCCCTCAGCGGCATGAGAAGCT...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACATTTCTCTGCAGGTATaGGGCCAGGTAGAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANISLQV*GQVERW Trigger: CCACCTTTCTACCTGGCCTCATACCTGCAGAGAAAT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACGGATCAATGTGCGGGTaGCTAGATGCAGTTCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANGSMCG*LDAVPR Trigger: TCTAGGAACTGCATCTAGTCACCCGCACATTGATCC...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAACCCAGCAGCTGTTGCTaGTCGTGCCGCTGTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKPSSCC*SCRCPH Trigger: GTGCGGACAGCGGCACGAGCAGCAACAGCTGCTGGG...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCAATTCACCTGGAAAGTaGTTGGTAACAAGTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGNSPGK*LVTSFI Trigger: AATGAAACTTGTTACCAAGCACTTTCCAGGTGAATT...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACTCTTGTAGTAGCCTCTaGTCGCACCTGACTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANSCSSL*SHLTYS Trigger: GCTGTAAGTCAGGTGCGAGCAGAGGCTACTACAAGA...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGTCTGTCCCTGTATTATaGTTTCTCACAGCCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKSVPVL*FLTARV Trigger: AACTCTGGCTGTGAGAAAGCATAATACAGGGACAGA...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGCCACGCAATACAGATTaGCTTGTTCAAATGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKPRNTD*LVQMTI Trigger: GATGGTCATTTGAACAAGCCAATCTGTATTGCGTGG...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGATCACGAATAGTACTTaGAGAAACAGTTCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKITNST*RNSSGL Trigger: CAGCCCAGAACTGTTTCTCCAAGTACTATTCGTGAT...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACGTGTGGACAACTTTCTaGACTAGGATCTCACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANVWTTF*TRISLP Trigger: TGGGAGTGAGATCCTAGTTCAGAAAGTTGTCCACAC...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACGTCGTCTCAGCATCTTaGCTATCCATCTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANVVSAS*LSISSG Trigger: ACCTGAAGAGATGGATAGTCAAGATGCTGAGACGAC...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACTGCCTTTTTAGCAGCTaGTGTAACTTCCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANCLFSS*CNFLRL Trigger: CAGCCTGAGGAAGTTACAGCAGCTGCTAAAAAGGCA...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGATTTTAGTTGGTAGCTaGGACTCCAATTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKILVGS*DSNSCP Trigger: AGGACAAGAATTGGAGTCGCAGCTACCAACTAAAAT...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACGCAAGGCCGAATATGTaGATATTCCTCAGGCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANARPNM*IFLRPK Trigger: CTTAGGCCTGAGGAATATCCACATATTCGGCCTTGC...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGACTTCGACTTTTCTTTaGGAAAGATCAGATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLVYRVGSRPAKTSTFL*ERSDGA Trigger: AGCACCATCTGATCTTTCCCAAAGAAAAGTCGAAGT...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAACGTGCTCTGGTTCGATaGGGAAGGCCCGGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKRALVR*GRPGHQ Trigger: TTGGTGACCGGGCCTTCCTCATCGAACCAGAGCACG...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGTTCTCCCTCAGAGCATaGCAGAAGAGCTCTCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLFSLRA*QKSSRP Trigger: AGGCCGAGAGCTCTTCTGGCATGCTCTGAGGGAGAA...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGGGGGACACCTTCAGGTaGCACAAACAGAGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLGDTFR*HKQRVT Trigger: TGTGACCCTCTGTTTGTGCCACCTGAAGGTGTCCCC...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACTTTTCCATCCCTGCCTaGGGTGGCATTAACTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANFSIPA*GGINSL Trigger: TAAAGAGTTAATGCCACCCCAGGCAGGGATGGAAAA...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| 3UTR CAA 72 bp | GACTGTAGTCTCAGCATTCTGAGTTCACAGTGCCTGTaGCTTCAGCACTACTCTCAGCATTGTACCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: DCSLSILSSQCL*LQHYSQHCTYG Trigger: ACCATAGGTACAATGCTGAGAGTAGTGCTGAAGCAACAGGCACTGTGAACTCAGAATGCTGAGACTACAGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACCAAAGCAAACACTTGTaGAGGCGATTGTCCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANQSKHL*RRLSIT Trigger: AGTAATGGACAATCGCCTTCACAAGTGTTTGCTTTG...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAATATACTGTTTCTCTaGCTACTCTTCCTCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANNILFL*LLFLPT Trigger: AGTGGGGAGGAAGAGTAGTCAGAGAAACAGTATATT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACCAAGTGCTTGTCCATTaGAGCCTGAATAGAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANQVLVH*SLNRRN Trigger: GTTTCTTCTATTCAGGCTTCAATGGACAAGCACTTG...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGTCGAACAGTTCGCCTTaGTTCATGTCCCGGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLSNSSP*FMSRRS Trigger: GCTTCTCCGGGACATGAACCAAGGCGAACTGTTCGA...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAACTTAGAAGTGGTAGGTaGGTAGGGAGCCTTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKLRSGR*VGSLGG Trigger: CCCACCAAGGCTCCCTACTCACCTACCACTTCTAAG...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAATTTCACAGTGTGGGCTaGGTGTGCAGCAGTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKFHSVG*VCSSGW Trigger: CCATCCACTGCTGCACACTCAGCCCACACTGTGAAA...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGCCCATCCACATGCACTaGGATGAGGCATTCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLPIHMH*DEAFLT Trigger: AGTCAAGAATGCCTCATCCCAGTGCATGTGGATGGG...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGAATTCATGGGTAGTTTaGGCAGGGCAGCCCCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLNSWVV*AGQPPL Trigger: TAAAGGGGGCTGCCCTGCCCAAACTACCCATGAATT...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGTCTTGTTTCACAGTGTaGGCTGAGTGTGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLSCFTV*AECAAV Trigger: CACTGCTGCACACTCAGCCCACACTGTGAAACAAGA...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACGGATCGCTTTCATACTaGAACCAATATACTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANGSLSY*NQYTVS Trigger: AGAAACAGTATATTGGTTTCAGTATGAAAGCGATCC...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAATATGGAGGAATGTTaGACTCTCTGGCTATACTTT | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANNMEEC*TLWLYF Trigger: AAAGTATAGCCAGAGAGTTCAACATTCCTCCATATT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAATCAGGCAAGCCAGTCTaGAGATTCACAGGCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKSGKPV*RFTGLT Trigger: TGTGAGGCCTGTGAATCTTCAGACTGGCTTGCCTGA...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAGTACATCTGCTACATaGCTATCAGTTGTTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WAFKGSIAHLNHKAQKANSTSAT*LSVVSV Trigger: TACTGAAACAACTGATAGTCATGTAGCAGATGTACT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGAATGGGGAAATGTCCTaGAGCATCGACACACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLNGEMS*SIDTQL Trigger: GAGTTGTGTGTCGATGCTGCAGGACATTTCCCCATT...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGGGGATGAGGCATTCTTaGCTTTTATTAGCCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLGMRHS*LLLARL Trigger: CAAACGGGCTAATAAAAGTCAAGAATGCCTCATCCC...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGAGGGTAACCATAGACTaGCGTCCATCGTTAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLRVTID*RPSLVV Trigger: AACAACTAACGATGGACGGCAGTCTATGGTTACCCT...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAAAGATGGTGCTTGCTCTaGACTTTGATCCCGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKRWCLL*TLIPQV Trigger: CACTTGCGGGATCAAAGTGCAGAGCAAGCACCATCT...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGGACGATGTAACACATTaGCAAGGCCGAATATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLDDVTH*QGRICG Trigger: TCCACATATTCGGCCTTGCCAATGTGTTACATCGTC...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGTTGGGAAAGATCAGATaGTGCTTGCTCTGCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLLGKIR*CLLCTL Trigger: CAAAGTGCAGAGCAAGCACCATCTGATCTTTCCCAA...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAAGTGAGGAAGTCCCTTTaGATAAGACCACACGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKVRKSL*IRPHVF Trigger: GAAGACGTGTGGTCTTATGCAAAGGGACTTCCTCAC...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGACTCCCAAATTCACCTaGAAAGTGCTTGGTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLTPKFT*KVLGNK Trigger: CTTGTTACCAAGCACTTTCCAGGTGAATTTGGGAGT...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAATTGGAGAAACAGTTCTaGGCTGCCCCTTTTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKLEKQF*AAPFAL Trigger: AAGAGCAAAAGGGGCAGCCCAGAACTGTTTCTCCAA...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAACAACATCAGGACCAATaGGGAAATGTCCTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKQHQDQ*GNVLQH Trigger: ATGCTGCAGGACATTTCCCCATTGGTCCTGATGTTG...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAAGTGCTTTTGACCTTGTaGCAAATGCTGCTCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKVLLTL*QMLLPV Trigger: TACTGGGAGCAGCATTTGCCACAAGGTCAAAAGCAC...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAAATTGGCTTGTTCAAATaGCCATCTCTCCCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKIGLFK*PSLPVH Trigger: ATGCACTGGGAGAGATGGTCATTTGAACAAGCCAAT...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGCCCATGAGTACTTTTTaGCAAGTTATACAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLPMSTF*QVIQFP Trigger: GGGAAACTGTATAACTTGGCAAAAAGTACTCATGGG...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| 3UTR CAA 72 bp | ACTCATAATACTTGGCAGTGTCTTGTTTCCTTCAACTaGAGCAATTGTTCATTACCAGCCTTCTGGACATAC | + |
|
Preference number: 4 (lower is better) Translates to: THNTWQCLVSFN*SNCSLPAFWTY Trigger: GTATGTCCAGAAGGCTGGTAATGAACAATTGCTCAAGTTGAAGGAAACAAGACACTGCCAAGTATTATGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAATTTTTAATAAGGTCCTaGGGCACACCCCATGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKFLIRS*GTPHAL Trigger: TAAAGCATGGGGTGTGCCTCAGGACCTTATTAAAAA...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAAACATCAGGATCAATCTaGCTACCGTCTCTCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKTSGSI*LPSLIV Trigger: AACAATGAGAGACGGTAGGCAGATTGATCCTGATGT...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAAAGTAAGTACTTATCCTaGAAACTTCTGTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKSKYLS*KLLSPP Trigger: TGGAGGAGACAGAAGTTTGCAGGATAAGTACTTACT...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR GCA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGTATTCAAATTCTCAGTaGCACCAGTTAAAGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLYSNSQ*HQLKKT Trigger: CGTTTTCTTTAACTGGTGGCACTGAGAATTTGAATA...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| 3UTR CAA 72 bp | GAAATCAACATTCTCATGAAATGTAGGACGGCTACCTaGAAAACAATGTGTACAAACTGTCATTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EINILMKCRTAT*KTMCTNCHFLF Trigger: GAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAAGATAGGAAAAGCTTCTaGAAGATTGTCATACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGKLEINILMKCRTATLKDRKSF*KIVILF Trigger: AAAGAGTATGACAATCTTCCAGAAGCTTTTCCTATC...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS TCA 90 bp | GCTGTTGCTGCTCGTGCCGCTGTCCGCACTCGGTACACTCGATGCTaGCAGAACCCGAGGCCGGGAAGAAGAGGCGCGCCTGGCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVAARAAVRTRYTRC*QNPRPGRRGAPGTW Trigger: CCAAGTGCCAGGCGCGCCTCTTCTTCCCGGCCTCGGGTTCTGTCAGCATCGAGTGTACCGAGTGCGGACAGCGGCACGAGCAGCAACAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS GCA 90 bp | TTGGGAGCCCCCGTCACTCCGAGTAGCGCGTTCCGCAGCAGATTGTaGAGCACTACGTCCGGGTCGGTCACCTCCTCCACTCCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGAPVTPSSAFRSRL*STTSGSVTSSTPSS Trigger: GCTGCTGGGAGTGGAGGAGGTGACCGACCCGGACGTAGTGCTGCACAATCTGCTGCGGAACGCGCTACTCGGAGTGACGGGGGCTCCCAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS-3UTR CAA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCAGGCGCGCCTGGCACTaGGGATCCGGGCAACTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGRRAWH*GSGQLP Trigger: CGGGAGTTGCCCGGATCCCAAGTGCCAGGCGCGCCT...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
||
| CDS GCA 90 bp | AGCACTACGTCCGGGTCGGTCACCTCCTCCACTCCCAGCAGCTGTTaGTGCTCGTGCCGCTGTCCGCACTCGGTACACTCGATGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: STTSGSVTSSTPSSC*CSCRCPHSVHSMLT Trigger: TGTCAGCATCGAGTGTACCGAGTGCGGACAGCGGCACGAGCAGCAACAGCTGCTGGGAGTGGAGGAGGTGACCGACCCGGACGTAGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 90 bp | CACTCGATGCTGACAGAACCCGAGGCCGGGAAGAAGAGGCGCGCCTaGCACTTGGGATCCGGGCAACTCCCGGAAAGGATTCTTCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSMLTEPEAGKKRRA*HLGSGQLPERILRS Trigger: GGACCGAAGAATCCTTTCCGGGAGTTGCCCGGATCCCAAGTGCCAGGCGCGCCTCTTCTTCCCGGCCTCGGGTTCTGTCAGCATCGAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | ACTACGTCCGGGTCGGTCACCTCCTCCACTCCCAGCAGCTGTTGCTaGTCGTGCCGCTGTCCGCACTCGGTACACTCGATGCTGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TTSGSVTSSTPSSCC*SCRCPHSVHSMLTE Trigger: TTCTGTCAGCATCGAGTGTACCGAGTGCGGACAGCGGCACGAGCAGCAACAGCTGCTGGGAGTGGAGGAGGTGACCGACCCGGACGTAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 90 bp | AGGAAGGCCCGGTCACCAAGTAACGCGCAATCGAACAGTTCGCCTTaGTTCATGTCCCGGAGAAGCTTGGCCCGGCCCGTTTGTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKARSPSNAQSNSSP*FMSRRSLARPVCLS Trigger: GGACAAACAAACGGGCCGGGCCAAGCTTCTCCGGGACATGAACCAAGGCGAACTGTTCGATTGCGCGTTACTTGGTGACCGGGCCTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | GCATGCCAGAAGAGCTCTCGGCCTACTAGAGCCCTAGACACAGCATaGACTAGGCAGTGTCCATCCCCATCCACATGCACTGGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACQKSSRPTRALDTA*TRQCPSPSTCTGMR Trigger: CCTCATCCCAGTGCATGTGGATGGGGATGGACACTGCCTAGTGCATGCTGTGTCTAGGGCTCTAGTAGGCCGAGAGCTCTTCTGGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 90 bp | GGTAGTTGGAGAGGCCCATCACCTTTACCAGTTCCGTGTTCTTCTTaGGAGCCCCCGTCACTCCGAGTAGCGCGTTCCGCAGCAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSWRGPSPLPVPCSS*EPPSLRVARSAADC Trigger: ACAATCTGCTGCGGAACGCGCTACTCGGAGTGACGGGGGCTCCCAAGAAGAACACGGAACTGGTAAAGGTGATGGGCCTCTCCAACTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGGCGTTCCGCAGCAGATaGTGCAGCACTACGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLFKASLVYRVGSRPAKAFRSR*CSTTSG Trigger: CCCGGACGTAGTGCTGCACAATCTGCTGCGGAACGC...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCGCCTACCGTCTCTCATaGTTACTACTCCAGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGAYRLS*LLLQEL Trigger: TAGCTCCTGGAGTAGTAACAATGAGAGACGGTAGGC...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 90 bp | ACGCGCAATCGAACAGTTCGCCTTGGTTCATGTCCCGGAGAAGCTTaGCCCGGCCCGTTTGTTTGTCCATTCCATAGCGTGCCAATATTG | + |
|
Preference number: 5 (lower is better) Translates to: TRNRTVRLGSCPGEA*PGPFVCPFHSVPIL Trigger: CAATATTGGCACGCTATGGAATGGACAAACAAACGGGCCGGGCCAAGCTTCTCCGGGACATGAACCAAGGCGAACTGTTCGATTGCGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | ACGTCTCTGCCTCCCAAGTGCTGGAATAAAAGGCGTGTGCCACCACTGCCTGGCAGAGGGTCACATTCATaGATAATGTCCTCCCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: TSLPPKCWNKRRVPPLPGRGSHS*IMSSHS Trigger: CGAGTGGGAGGACATTATCAATGAATGTGACCCTCT...GCCAGGCAGTGGTGGCACACGCCTTTTATTCCAGCACTTGGGAGGCAGAGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAGTTCCGTGTTCTTCTaGGGAGCCCCCGTCACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WAFKGSIAHLNHKAQKANSSVFF*GAPVTP Trigger: CGGAGTGACGGGGGCTCCCAAGAAGAACACGGAACT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACATGTCCCGGAGAAGCTaGGCCCGGCCCGTTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WAFKGSIAHLNHKAQKANMSRRS*ARPVCL Trigger: CAAACAAACGGGCCGGGCCAAGCTTCTCCGGGACAT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGATCGAACAGTTCGCCTaGGTTCATGTCCCGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSLFKASLVYRVGSRPAKIEQFA*VHVPEK Trigger: CTTCTCCGGGACATGAACCAAGGCGAACTGTTCGAT...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACCTTGGCCCGGCCCGTTaGTTTGTCCATTCCATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: WAFKGSIAHLNHKAQKANLGPAR*FVHSIA Trigger: CGCTATGGAATGGACAAACAAACGGGCCGGGCCAAG...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGCTGCGACTCCAATTCTaGTCCTTGCACATCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSLFKASLVYRVGSRPAKLRLQF*SLHISN Trigger: GTTGGAGATGTGCAAGGACAAGAATTGGAGTCGCAG...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | AGATCTCTTTTTAAGGCCAGCCTGGTCTATAGAGTGGGCTCCAGGCCAGCCAAGTGTGAGGAAGTCCCTTaGCATAAGACCACACGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSLFKASLVYRVGSRPAKCEEVP*HKTTRL Trigger: AAGACGTGTGGTCTTATGCAAAGGGACTTCCTCACA...CTTGGCTGGCCTGGAGCCCACTCTATAGACCAGGCTGGCCTTAAAAAGAGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | AGGCAGTGTCCATCCCCATCCACATGCACTGGGATGAGGCATTCTTaGCTTTTATTAGCCCGTTTGATATCCTCGAGCGTGTCGTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RQCPSPSTCTGMRHS*LLLARLISSSVSCK Trigger: TTTGCACGACACGCTCGAGGATATCAAACGGGCTAATAAAAGTCAAGAATGCCTCATCCCAGTGCATGTGGATGGGGATGGACACTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 90 bp | CTGTCACCGTGCTGTAAAGGAACTGGCTCCTTTTCCATCCCTGCCTaGGGTGGCATTAACTCTTTAGGAGGAAAGCCATATCGAATACAC | + |
|
Preference number: 5 (lower is better) Translates to: LSPCCKGTGSFSIPA*GGINSLGGKPYRIH Trigger: GTGTATTCGATATGGCTTTCCTCCTAAAGAGTTAATGCCACCCCAGGCAGGGATGGAAAAGGAGCCAGTTCCTTTACAGCACGGTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 90 bp | GATGACAGTTTACCAGTAACAGCAATCTCTTCTTGTTTCACAGTGTaGGCTGAGTGTGCAGCAGTGGATGGACCACCTTCTGCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DDSLPVTAISSCFTV*AECAAVDGPPSALP Trigger: AGGAAGAGCAGAAGGTGGTCCATCCACTGCTGCACACTCAGCCCACACTGTGAAACAAGAAGAGATTGCTGTTACTGGTAAACTGTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | GCTTGTTCAAATGACCATCTCTCCCAGTGCATTTCTCTGCAGGTATaGGGCCAGGTAGAAAGGTGGCTGAATAATCACCAGAGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ACSNDHLSQCISLQV*GQVERWLNNHQSFS Trigger: TGAGAAGCTCTGGTGATTATTCAGCCACCTTTCTACCTGGCCTCATACCTGCAGAGAAATGCACTGGGAGAGATGGTCATTTGAACAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | TTTCTACCAGAGCTACTCCACGCAATACAGATTGGCTTGTTCAAATaGCCATCTCTCCCAGTGCATTTCTCTGCAGGTATGAGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLPELLHAIQIGLFK*PSLPVHFSAGMRPG Trigger: ACCTGGCCTCATACCTGCAGAGAAATGCACTGGGAGAGATGGTCATTTGAACAAGCCAATCTGTATTGCGTGGAGTAGCTCTGGTAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | CAAACACTTGTGAAGGCGATTGTCCATTACTGCCTTTTTAGCAGCTaGTGTAACTTCCTCAGGCTGAACTCCTATCACCCCAGTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QTLVKAIVHYCLFSS*CNFLRLNSYHPSPS Trigger: AGAAGGACTGGGGTGATAGGAGTTCAGCCTGAGGAAGTTACAGCAGCTGCTAAAAAGGCAGTAATGGACAATCGCCTTCACAAGTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 90 bp | TTCCATAGCGTGCCAATATTGGCGACAATAATTTGCAGTGGTAGTTaGAGAGGCCCATCACCTTTACCAGTTCCGTGTTCTTCTTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FHSVPILATIICSGS*RGPSPLPVPCSSWE Trigger: CTCCCAAGAAGAACACGGAACTGGTAAAGGTGATGGGCCTCTCCAACTACCACTGCAAATTATTGTCGCCAATATTGGCACGCTATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | AAGGGCACCACAAAGCAAACACTTGTGAAGGCGATTGTCCATTACTaGCTTTTTAGCAGCTGCTGTAACTTCCTCAGGCTGAACTCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: KGTTKQTLVKAIVHY*LFSSCCNFLRLNSY Trigger: ATAGGAGTTCAGCCTGAGGAAGTTACAGCAGCTGCTAAAAAGGCAGTAATGGACAATCGCCTTCACAAGTGTTTGCTTTGTGGTGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 90 bp | AAAAGAATTATGGGACGATGTAACACATTGGCAAGGCCGAATATGTaGATATTCCTCAGGCCTAAGGGGACACCTTCAGGTGGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KRIMGRCNTLARPNM*IFLRPKGTPSGGTN Trigger: GTTTGTGCCACCTGAAGGTGTCCCCTTAGGCCTGAGGAATATCCACATATTCGGCCTTGCCAATGTGTTACATCGTCCCATAATTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAATCCACAACCACATTaGCCACCAGTAGACCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WAFKGSIAHLNHKAQKANNPQPH*PPVDLE Trigger: TTCTAGGTCTACTGGTGGCAAATGTGGTTGTGGATT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | GAAGGGCTTGATTCCCTACTTCTTGTAGTAGCCTCTGCTCGCACCTaGCTTACAGCCTCTTTAACTAAATCTTCAACATCAGGACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EGLDSLLLVVASART*LTASLTKSSTSGPM Trigger: CATTGGTCCTGATGTTGAAGATTTAGTTAAAGAGGCTGTAAGTCAGGTGCGAGCAGAGGCTACTACAAGAAGTAGGGAATCAAGCCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | TTCTCAGTGCCACCAGTTAAAGAAAACGGTTCAGGCAAGCCAGTCTaGAGATTCACAGGCCTCACAGAACTCACAACTTCGACTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FSVPPVKENGSGKPV*RFTGLTELTTSTFL Trigger: AAGAAAAGTCGAAGTTGTGAGTTCTGTGAGGCCTGTGAATCTTCAGACTGGCTTGCCTGAACCGTTTTCTTTAACTGGTGGCACTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | TTTGTTTGTCCATTCCATAGCGTGCCAATATTGGCGACAATAATTTaGAGTGGTAGTTGGAGAGGCCCATCACCTTTACCAGTTCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FVCPFHSVPILATII*SGSWRGPSPLPVPC Trigger: ACACGGAACTGGTAAAGGTGATGGGCCTCTCCAACTACCACTGCAAATTATTGTCGCCAATATTGGCACGCTATGGAATGGACAAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | AAGACTTCTTCCATAGCAGCAACCAGCCTAAGTAAGTACTTATCCTaGAAACTTCTGTCTCCTCCAATAACACAGCCACCATCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTSSIAATSLSKYLS*KLLSPPITQPPSSS Trigger: TGAGGAGGATGGTGGCTGTGTTATTGGAGGAGACAGAAGTTTGCAGGATAAGTACTTACTTAGGCTGGTTGCTGCTATGGAAGAAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | AAAGCTGTAATTTTTGTCAGGCCTCAACTGCCCATGAGTACTTTTTaGCAAGTTATACAGTTTCCCTCCTGGAGCCAACCACTCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KAVIFVRPQLPMSTF*QVIQFPSWSQPLRR Trigger: CCTTCTGAGTGGTTGGCTCCAGGAGGGAAACTGTATAACTTGGCAAAAAGTACTCATGGGCAGTTGAGGCCTGACAAAAATTACAGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 90 bp | GGGAATATAATGGTTTCTACCAGAGCTACTCCACGCAATACAGATTaGCTTGTTCAAATGACCATCTCTCCCAGTGCATTTCTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GNIMVSTRATPRNTD*LVQMTISPSAFLCR Trigger: CCTGCAGAGAAATGCACTGGGAGAGATGGTCATTTGAACAAGCCAATCTGTATTGCGTGGAGTAGCTCTGGTAGAAACCATTATATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACTGGGATGAGGCATTCTaGACTTTTATTAGCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: WAFKGSIAHLNHKAQKANWDEAF*TFISPF Trigger: AAACGGGCTAATAAAAGTCAAGAATGCCTCATCCCA...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACTCACCTGGAAAGTGCTaGGTAACAAGTTTCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WAFKGSIAHLNHKAQKANSPGKC*VTSFIA Trigger: TGCAATGAAACTTGTTACCAAGCACTTTCCAGGTGA...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAACTTCGACTTTTCTTaGGGAAAGATCAGATGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WAFKGSIAHLNHKAQKANNFDFS*GKIRWC Trigger: GCACCATCTGATCTTTCCCAAAGAAAAGTCGAAGTT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | CAGGTAGAAAGGTGGCTGAATAATCACCAGAGCTTCTCATGCCGCTaGGGGAATCTAAAAGAATTATGGGACGATGTAACACATTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QVERWLNNHQSFSCR*GNLKELWDDVTHWQ Trigger: TTGCCAATGTGTTACATCGTCCCATAATTCTTTTAGATTCCCTCAGCGGCATGAGAAGCTCTGGTGATTATTCAGCCACCTTTCTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | CAGCCACCATCCTCCTCAAGCTTGATGTACTTTTTAATAAGGTCCTaGGGCACACCCCATGCTTTAGGTAACAAATTCATGGGTAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QPPSSSSLMYFLIRS*GTPHALGNKFMGSL Trigger: CAAACTACCCATGAATTTGTTACCTAAAGCATGGGGTGTGCCTCAGGACCTTATTAAAAAGTACATCAAGCTTGAGGAGGATGGTGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGAAGATCAGATGGTGCTaGCTCTGCACTTTGATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLKIRWC*LCTLIP Trigger: CGGGATCAAAGTGCAGAGCAAGCACCATCTGATCTT...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | GCTTTTGACCTTGTGGCAAATGCTGCTCCCAGTACATCTGCTACATaGCTATCAGTTGTTTCAGTATTCAAATTCTCAGTGCCACCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AFDLVANAAPSTSAT*LSVVSVFKFSVPPV Trigger: AACTGGTGGCACTGAGAATTTGAATACTGAAACAACTGATAGTCATGTAGCAGATGTACTGGGAGCAGCATTTGCCACAAGGTCAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGCTCCAATTCTTGTCCTaGCACATCTCCAACTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLLQFLS*HISNSL Trigger: CAGAGAGTTGGAGATGTGCAAGGACAAGAATTGGAG...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TGGGCCTTTAAAGGCTCCATAGCACATCTCAATCACAAAGCACAGAAGGCCAACAAATATGGAGGAATGTaGAACTCTCTGGCTATACTT | + |
|
Preference number: 5 (lower is better) Translates to: WAFKGSIAHLNHKAQKANKYGGM*NSLAIL Trigger: AAGTATAGCCAGAGAGTTCAACATTCCTCCATATTT...GTTGGCCTTCTGTGCTTTGTGATTGAGATGTGCTATGGAGCCTTTAAAGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGAGTCGTCTCAGCATCTaGACTATCCATCTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLSRLSI*TIHLFR Trigger: CCTGAAGAGATGGATAGTCAAGATGCTGAGACGACT...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | GGCTCTGTTTTAATGGAACTATTACTAAAATCTGTCCCTGTATTATaGTTTCTCACAGCCAGAGTTTCCCTAGCTCTGGGATCAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSVLMELLLKSVPVL*FLTARVSLALGSMC Trigger: GCACATTGATCCCAGAGCTAGGGAAACTCTGGCTGTGAGAAAGCATAATACAGGGACAGATTTTAGTAATAGTTCCATTAAAACAGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | GCTACCTTGAAAACAATGTGTACAAACTGTCATTTCCTCTTCAATTCTGGCCTGGGAAAAGTACAATGTTaGCCATCAGCCATGCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: ATLKTMCTNCHFLFNSGLGKVQC*PSAMPI Trigger: TATGGGCATGGCTGATGGCAAACATTGTACTTTTCC...CAGGCCAGAATTGAAGAGGAAATGACAGTTTGTACACATTGTTTTCAAGGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | CAAGGAGTACATTTCTTTGTCAGCTTGCTCCTGAAGTTCCTTAGATaGCAGTTTACCAGTAACAGCAATCTCTTCTTGTTTCACAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGVHFFVSLLLKFLR*QFTSNSNLFLFHSV Trigger: CACACTGTGAAACAAGAAGAGATTGCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAGGAGCAAGCTGACAAAGAAATGTACTCCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | CACACAACTCCAGTCTATCTTCAGAAGCATTATAAACAAAGGTTTTaGCAGGTAGATGTGGAAAAGTACAATGTTTGCCATCAGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: HTTPVYLQKHYKQRF*QVDVEKYNVCHQPC Trigger: GCATGGCTGATGGCAAACATTGTACTTTTCCACATCTACCTGGCAAAACCTTTGTTTATAATGCTTCTGAAGATAGACTGGAGTTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | CATCTGCTACATGACTATCAGTTGTTTCAGTATTCAAATTCTCAGTaGCACCAGTTAAAGAAAACGGTTCAGGCAAGCCAGTCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLLHDYQLFQYSNSQ*HQLKKTVQASQSED Trigger: ATCTTCAGACTGGCTTGCCTGAACCGTTTTCTTTAACTGGTGGCACTGAGAATTTGAATACTGAAACAACTGATAGTCATGTAGCAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAATTTGTGCTTTTGACCTaGTGGCAAATGCTGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGKLEINILMKCRTATLKFVLLT*WQMLLP Trigger: TGGGAGCAGCATTTGCCACAAGGTCAAAAGCACAAA...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 90 bp | GTAGCTAAAAGACACAAGGAGTACATTTCTTTGTCAGCTTGCTCCTaGAGTTCCTTAGATGACAGTTTACCAGTAACAGCAATCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VAKRHKEYISLSACS*SSLDDSLPVTAISS Trigger: AGAAGAGATTGCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAGGAGCAAGCTGACAAAGAAATGTACTCCTTGTGTCTTTTAGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAATCCACGCAATACAGATaGGCTTGTTCAAATGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGKLEINILMKCRTATLKSTQYR*ACSNDH Trigger: ATGGTCATTTGAACAAGCCAATCTGTATTGCGTGGA...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS-3UTR CAA 90 bp | TCAGGTAAACTTGAAATCAACATTCTCATGAAATGTAGGACGGCTACCTTGAAACCATCCTCCTCAAGCTaGATGTACTTTTTAATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGKLEINILMKCRTATLKPSSSS*MYFLIR Trigger: CCTTATTAAAAAGTACATCAAGCTTGAGGAGGATGG...TTTCAAGGTAGCCGTCCTACATTTCATGAGAATGTTGATTTCAAGTTTACCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 90 bp | CTCACTCCCAAATTCACCTGGAAAGTGCTTGGTAACAAGTTTCATTaGAACATCATAAACATTACTATTCAAAGATGGATCGCTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LTPKFTWKVLGNKFH*NIINITIQRWIAFI Trigger: TATGAAAGCGATCCATCTTTGAATAGTAATGTTTATGATGTTGCAATGAAACTTGTTACCAAGCACTTTCCAGGTGAATTTGGGAGTGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | GCTCGTGCCGCTGTCCGCACTCGGTACACTCGATGCTaGCAGAACCCGAGGCCGGGAAGAAGAGGCGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARAAVRTRYTRC*QNPRPGRRGAP Trigger: AGGCGCGCCTCTTCTTCCCGGCCTCGGGTTCTGTCAGCATCGAGTGTACCGAGTGCGGACAGCGGCACGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | TCCGGGTCGGTCACCTCCTCCACTCCCAGCAGCTGTTaGTGCTCGTGCCGCTGTCCGCACTCGGTACACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGSVTSSTPSSC*CSCRCPHSVHS Trigger: CGAGTGTACCGAGTGCGGACAGCGGCACGAGCAGCAACAGCTGCTGGGAGTGGAGGAGGTGACCGACCCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | GCCCCCGTCACTCCGAGTAGCGCGTTCCGCAGCAGATaGTGCAGCACTACGTCCGGGTCGGTCACCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: APVTPSSAFRSR*CSTTSGSVTSS Trigger: GGAGGAGGTGACCGACCCGGACGTAGTGCTGCACAATCTGCTGCGGAACGCGCTACTCGGAGTGACGGGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | GGGTCGGTCACCTCCTCCACTCCCAGCAGCTGTTGCTaGTCGTGCCGCTGTCCGCACTCGGTACACTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSVTSSTPSSCC*SCRCPHSVHSM Trigger: CATCGAGTGTACCGAGTGCGGACAGCGGCACGAGCAGCAACAGCTGCTGGGAGTGGAGGAGGTGACCGACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | GAACCCGAGGCCGGGAAGAAGAGGCGCGCCTGGCACTaGGGATCCGGGCAACTCCCGGAAAGGATTCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: EPEAGKKRRAWH*GSGQLPERILR Trigger: CCGAAGAATCCTTTCCGGGAGTTGCCCGGATCCCAAGTGCCAGGCGCGCCTCTTCTTCCCGGCCTCGGGTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | TTCTTGGGAGCCCCCGTCACTCCGAGTAGCGCGTTCCGCAGCAGATaGTGCAGCACTACGTCCGGGTCGGTCACCTCCTCCACTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLGAPVTPSSAFRSR*CSTTSGSVTSSTPS Trigger: GCTGGGAGTGGAGGAGGTGACCGACCCGGACGTAGTGCTGCACAATCTGCTGCGGAACGCGCTACTCGGAGTGACGGGGGCTCCCAAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | CCCGTCACTCCGAGTAGCGCGTTCCGCAGCAGATTGTaGAGCACTACGTCCGGGTCGGTCACCTCCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: PVTPSSAFRSRL*STTSGSVTSST Trigger: AGTGGAGGAGGTGACCGACCCGGACGTAGTGCTGCACAATCTGCTGCGGAACGCGCTACTCGGAGTGACGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | CTGACAGAACCCGAGGCCGGGAAGAAGAGGCGCGCCTaGCACTTGGGATCCGGGCAACTCCCGGAAAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: LTEPEAGKKRRA*HLGSGQLPERI Trigger: AATCCTTTCCGGGAGTTGCCCGGATCCCAAGTGCCAGGCGCGCCTCTTCTTCCCGGCCTCGGGTTCTGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | ATGCTGACAGAACCCGAGGCCGGGAAGAAGAGGCGCGCCTGGCACTaGGGATCCGGGCAACTCCCGGAAAGGATTCTTCGGTCCCTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: MLTEPEAGKKRRAWH*GSGQLPERILRSLR Trigger: ACGAAGGGACCGAAGAATCCTTTCCGGGAGTTGCCCGGATCCCAAGTGCCAGGCGCGCCTCTTCTTCCCGGCCTCGGGTTCTGTCAGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | GAGAGGCCCATCACCTTTACCAGTTCCGTGTTCTTCTaGGGAGCCCCCGTCACTCCGAGTAGCGCGTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ERPITFTSSVFF*GAPVTPSSAFR Trigger: GCGGAACGCGCTACTCGGAGTGACGGGGGCTCCCAAGAAGAACACGGAACTGGTAAAGGTGATGGGCCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | AGAGGCCCATCACCTTTACCAGTTCCGTGTTCTTCTTaGGAGCCCCCGTCACTCCGAGTAGCGCGTTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RGPSPLPVPCSS*EPPSLRVARSA Trigger: TGCGGAACGCGCTACTCGGAGTGACGGGGGCTCCCAAGAAGAACACGGAACTGGTAAAGGTGATGGGCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | CGGTCACCAAGTAACGCGCAATCGAACAGTTCGCCTTaGTTCATGTCCCGGAGAAGCTTGGCCCGGCCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSPSNAQSNSSP*FMSRRSLARPV Trigger: AACGGGCCGGGCCAAGCTTCTCCGGGACATGAACCAAGGCGAACTGTTCGATTGCGCGTTACTTGGTGACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | CGAACAGTTCGCCTTGGTTCATGTCCCGGAGAAGCTTaGCCCGGCCCGTTTGTTTGTCCATTCCATAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTVRLGSCPGEA*PGPFVCPFHSV Trigger: CACGCTATGGAATGGACAAACAAACGGGCCGGGCCAAGCTTCTCCGGGACATGAACCAAGGCGAACTGTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | GCCAGAGTTTCCCTAGCTCTGGGATCAATGTGCGGGTaGCTAGATGCAGTTCCTAGAGAATGGCCCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARVSLALGSMCG*LDAVPREWPFP Trigger: GGGGAAGGGCCATTCTCTAGGAACTGCATCTAGTCACCCGCACATTGATCCCAGAGCTAGGGAAACTCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | AAGAGCTCTCGGCCTACTAGAGCCCTAGACACAGCATaGACTAGGCAGTGTCCATCCCCATCCACATGCACT | + |
|
Preference number: 6 (lower is better) Translates to: KSSRPTRALDTA*TRQCPSPSTCT Trigger: AGTGCATGTGGATGGGGATGGACACTGCCTAGTGCATGCTGTGTCTAGGGCTCTAGTAGGCCGAGAGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | TTGGTTCATGTCCCGGAGAAGCTTGGCCCGGCCCGTTaGTTTGTCCATTCCATAGCGTGCCAATATTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LVHVPEKLGPAR*FVHSIACQYWR Trigger: TCGCCAATATTGGCACGCTATGGAATGGACAAACAAACGGGCCGGGCCAAGCTTCTCCGGGACATGAACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | CTTTTATTAGCCCGTTTGATATCCTCGAGCGTGTCGTaGAAATACAGGAGGCTTCCGGAGCGGTCCTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLARLISSSVS*KYRRLPERSLP Trigger: TGGCAAGGACCGCTCCGGAAGCCTCCTGTATTTGCACGACACGCTCGAGGATATCAAACGGGCTAATAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | GCTTGGCCCGGCCCGTTTGTTTGTCCATTCCATAGCGTGCCAATATaGGCGACAATAATTTGCAGTGGTAGTTGGAGAGGCCCATCACCT | + |
|
Preference number: 6 (lower is better) Translates to: AWPGPFVCPFHSVPI*ATIICSGSWRGPSP Trigger: AGGTGATGGGCCTCTCCAACTACCACTGCAAATTATTGTCGCCAATATTGGCACGCTATGGAATGGACAAACAAACGGGCCGGGCCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | TGTTATTCGAATCTTCTTCTCCTTAGAAGTGGTAGGTaGGTAGGGAGCCTTGGTGGGGGTGGCAGGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CYSNLLLLRSGR*VGSLGGGGRCR Trigger: TCTGCACCTGCCACCCCCACCAAGGCTCCCTACTCACCTACCACTTCTAAGGAGAAGAAGATTCGAATAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | ACACCCCATGCTTTAGGTAACAAATTCATGGGTAGTTaGGGCAGGGCAGCCCCCTTTATGCCTACCAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TPHALGNKFMGS*GRAAPFMPTKG Trigger: TCCCTTGGTAGGCATAAAGGGGGCTGCCCTGCCCAAACTACCCATGAATTTGTTACCTAAAGCATGGGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | CCATCCCCATCCACATGCACTGGGATGAGGCATTCTTaGCTTTTATTAGCCCGTTTGATATCCTCGAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSPSTCTGMRHS*LLLARLISSSV Trigger: CACGCTCGAGGATATCAAACGGGCTAATAAAAGTCAAGAATGCCTCATCCCAGTGCATGTGGATGGGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | GTGAAGGCGATTGTCCATTACTGCCTTTTTAGCAGCTaGTGTAACTTCCTCAGGCTGAACTCCTATCACCCC | + |
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Preference number: 6 (lower is better) Translates to: VKAIVHYCLFSS*CNFLRLNSYHP Trigger: GGGGTGATAGGAGTTCAGCCTGAGGAAGTTACAGCAGCTGCTAAAAAGGCAGTAATGGACAATCGCCTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | TTTTTCCGCTGGGCCTCAACCACATCAGGATCAATCTaGCTACCGTCTCTCATTGTTACTACTCCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: FFRWASTTSGSI*LPSLIVTTPGA Trigger: AGCTCCTGGAGTAGTAACAATGAGAGACGGTAGGCAGATTGATCCTGATGTGGTTGAGGCCCAGCGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | ATGGGACGATGTAACACATTGGCAAGGCCGAATATGTaGATATTCCTCAGGCCTAAGGGGACACCTTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: MGRCNTLARPNM*IFLRPKGTPSG Trigger: ACCTGAAGGTGTCCCCTTAGGCCTGAGGAATATCCACATATTCGGCCTTGCCAATGTGTTACATCGTCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | AATGACCATCTCTCCCAGTGCATTTCTCTGCAGGTATaGGGCCAGGTAGAAAGGTGGCTGAATAATCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: NDHLSQCISLQV*GQVERWLNNHQ Trigger: CTGGTGATTATTCAGCCACCTTTCTACCTGGCCTCATACCTGCAGAGAAATGCACTGGGAGAGATGGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | CCACCAGTTAAAGAAAACGGTTCAGGCAAGCCAGTCTaGAGATTCACAGGCCTCACAGAACTCACAACTTCG | + |
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Preference number: 6 (lower is better) Translates to: PPVKENGSGKPV*RFTGLTELTTS Trigger: CGAAGTTGTGAGTTCTGTGAGGCCTGTGAATCTTCAGACTGGCTTGCCTGAACCGTTTTCTTTAACTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | AATTCATGGGTAGTTTGGGCAGGGCAGCCCCCTTTATaGCTACCAAGGGAATATAATGGTTTCTACCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NSWVVWAGQPPL*LPREYNGFYQS Trigger: GCTCTGGTAGAAACCATTATATTCCCTTGGTAGGCATAAAGGGGGCTGCCCTGCCCAAACTACCCATGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | TGCTGTAAAGGAACTGGCTCCTTTTCCATCCCTGCCTaGGGTGGCATTAACTCTTTAGGAGGAAAGCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: CCKGTGSFSIPA*GGINSLGGKPY Trigger: ATATGGCTTTCCTCCTAAAGAGTTAATGCCACCCCAGGCAGGGATGGAAAAGGAGCCAGTTCCTTTACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | CTTCTTGTTTCACAGTGTGGGCTGAGTGTGCAGCAGTaGATGGACCACCTTCTGCTCTTCCTTTTAAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: LLVSQCGLSVQQ*MDHLLLFLLRS Trigger: AGATCTTAAAAGGAAGAGCAGAAGGTGGTCCATCCACTGCTGCACACTCAGCCCACACTGTGAAACAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | GGCCCGTTTGTTTGTCCATTCCATAGCGTGCCAATATaGGCGACAATAATTTGCAGTGGTAGTTGGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPFVCPFHSVPI*ATIICSGSWRG Trigger: GCCTCTCCAACTACCACTGCAAATTATTGTCGCCAATATTGGCACGCTATGGAATGGACAAACAAACGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | TCCATCCCCATCCACATGCACTGGGATGAGGCATTCTaGACTTTTATTAGCCCGTTTGATATCCTCGAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SIPIHMHWDEAF*TFISPFDILER Trigger: ACGCTCGAGGATATCAAACGGGCTAATAAAAGTCAAGAATGCCTCATCCCAGTGCATGTGGATGGGGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | ATGCCGCTGAGGGAATCTAAAAGAATTATGGGACGATGTAACACATaGGCAAGGCCGAATATGTGGATATTCCTCAGGCCTAAGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: MPLRESKRIMGRCNT*ARPNMWIFLRPKGT Trigger: TGTCCCCTTAGGCCTGAGGAATATCCACATATTCGGCCTTGCCAATGTGTTACATCGTCCCATAATTCTTTTAGATTCCCTCAGCGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | CTGAAGATTCACAGGCCTCACAGAACTCACAACTTCGACTTTTCTTaGGGAAAGATCAGATGGTGCTTGCTCTGCACTTTGATCCCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LKIHRPHRTHNFDFS*GKIRWCLLCTLIPQ Trigger: TTGCGGGATCAAAGTGCAGAGCAAGCACCATCTGATCTTTCCCAAAGAAAAGTCGAAGTTGTGAGTTCTGTGAGGCCTGTGAATCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | GAGCTACTCCACGCAATACAGATTGGCTTGTTCAAATaGCCATCTCTCCCAGTGCATTTCTCTGCAGGTATG | + |
|
Preference number: 6 (lower is better) Translates to: ELLHAIQIGLFK*PSLPVHFSAGM Trigger: CATACCTGCAGAGAAATGCACTGGGAGAGATGGTCATTTGAACAAGCCAATCTGTATTGCGTGGAGTAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | CCATTCCATAGCGTGCCAATATTGGCGACAATAATTTaGAGTGGTAGTTGGAGAGGCCCATCACCTTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: PFHSVPILATII*SGSWRGPSPLP Trigger: TGGTAAAGGTGATGGGCCTCTCCAACTACCACTGCAAATTATTGTCGCCAATATTGGCACGCTATGGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | CACAACTTCGACTTTTCTTTGGGAAAGATCAGATGGTaGTTGCTCTGCACTTTGATCCCGCAAGTGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HNFDFSLGKIRW*LLCTLIPQVLV Trigger: GACAAGCACTTGCGGGATCAAAGTGCAGAGCAAGCACCATCTGATCTTTCCCAAAGAAAAGTCGAAGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | GTGCCAATATTGGCGACAATAATTTGCAGTGGTAGTTaGAGAGGCCCATCACCTTTACCAGTTCCGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VPILATIICSGS*RGPSPLPVPCS Trigger: AGAACACGGAACTGGTAAAGGTGATGGGCCTCTCCAACTACCACTGCAAATTATTGTCGCCAATATTGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | GAGCCATCTCCTCTGACTCTTCGCACAGATGAGCCATaGCACCAATTACAAGCTGTTAGATTACTCAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: EPSPLTLRTDEP*HQLQAVRLLNP Trigger: TGGATTGAGTAATCTAACAGCTTGTAATTGGTGCCATGGCTCATCTGTGCGAAGAGTCAGAGGAGATGGCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | ACACCTTCAGGTGGCACAAACAGAGGGTCACATTCATaGATAATGTCCTCCCACTCGGCAGCATCAATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TPSGGTNRGSHS*IMSSHSAASIK Trigger: CTTTATTGATGCTGCCGAGTGGGAGGACATTATCAATGAATGTGACCCTCTGTTTGTGCCACCTGAAGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | CACAGGCCTCACAGAACTCACAACTTCGACTTTTCTTaGGGAAAGATCAGATGGTGCTTGCTCTGCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: HRPHRTHNFDFS*GKIRWCLLCTL Trigger: CAAAGTGCAGAGCAAGCACCATCTGATCTTTCCCAAAGAAAAGTCGAAGTTGTGAGTTCTGTGAGGCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | GAAAGCTGTAATTTTTGTCAGGCCTCAACTGCCCATGAGTACTTTTaGCCAAGTTATACAGTTTCCCTCCTGGAGCCAACCACTCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ESCNFCQASTAHEYF*PSYTVSLLEPTTQK Trigger: CTTCTGAGTGGTTGGCTCCAGGAGGGAAACTGTATAACTTGGCAAAAAGTACTCATGGGCAGTTGAGGCCTGACAAAAATTACAGCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | TCCATCGGCTCAGTTGTGTTAGTCGTCTCAGCATCTTaGCTATCCATCTCTTCAGGTTCCTCCATGGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: SIGSVVLVVSAS*LSISSGSSMEF Trigger: AAATTCCATGGAGGAACCTGAAGAGATGGATAGTCAAGATGCTGAGACGACTAACACAACTGAGCCGATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | TCCATAGCAGCAACCAGCCTAAGTAAGTACTTATCCTaGAAACTTCTGTCTCCTCCAATAACACAGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SIAATSLSKYLS*KLLSPPITQPP Trigger: TGGTGGCTGTGTTATTGGAGGAGACAGAAGTTTGCAGGATAAGTACTTACTTAGGCTGGTTGCTGCTATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | ACAAAGCAAACACTTGTGAAGGCGATTGTCCATTACTaGCTTTTTAGCAGCTGCTGTAACTTCCTCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TKQTLVKAIVHY*LFSSCCNFLRL Trigger: CAGCCTGAGGAAGTTACAGCAGCTGCTAAAAAGGCAGTAATGGACAATCGCCTTCACAAGTGTTTGCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | ATTTTTGTCAGGCCTCAACTGCCCATGAGTACTTTTTaGCAAGTTATACAGTTTCCCTCCTGGAGCCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: IFVRPQLPMSTF*QVIQFPSWSQP Trigger: TGGTTGGCTCCAGGAGGGAAACTGTATAACTTGGCAAAAAGTACTCATGGGCAGTTGAGGCCTGACAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | ACTCACAACTTCGACTTTTCTTTGGGAAAGATCAGATaGTGCTTGCTCTGCACTTTGATCCCGCAAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: THNFDFSLGKIR*CLLCTLIPQVL Trigger: AAGCACTTGCGGGATCAAAGTGCAGAGCAAGCACCATCTGATCTTTCCCAAAGAAAAGTCGAAGTTGTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | ATGGCCCTTCCCCTGAAAGGCAGTTACATTGTGAAGTaGCTCAGATTTCTTTTTCACTACTCCACCACTACC | + |
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Preference number: 6 (lower is better) Translates to: MALPLKGSYIVK*LRFLFHYSTTT Trigger: GGTAGTGGTGGAGTAGTGAAAAAGAAATCTGAGCAACTTCACAATGTAACTGCCTTTCAGGGGAAGGGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | ATCCATCGGCTCAGTTGTGTTAGTCGTCTCAGCATCTaGACTATCCATCTCTTCAGGTTCCTCCATGGAATT | + |
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Preference number: 6 (lower is better) Translates to: IHRLSCVSRLSI*TIHLFRFLHGI Trigger: AATTCCATGGAGGAACCTGAAGAGATGGATAGTCAAGATGCTGAGACGACTAACACAACTGAGCCGATGGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | AGGGAATATAATGGTTTCTACCAGAGCTACTCCACGCAATACAGATaGGCTTGTTCAAATGACCATCTCTCCCAGTGCATTTCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: REYNGFYQSYSTQYR*ACSNDHLSQCISLQ Trigger: CTGCAGAGAAATGCACTGGGAGAGATGGTCATTTGAACAAGCCAATCTGTATTGCGTGGAGTAGCTCTGGTAGAAACCATTATATTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | TCACGAGTGATCCATCGGCTCAGTTGTGTTAGTCGTCTCAGCATCTaGACTATCCATCTCTTCAGGTTCCTCCATGGAATTTTCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRVIHRLSCVSRLSI*TIHLFRFLHGIFFL Trigger: CAAAAAGAAAATTCCATGGAGGAACCTGAAGAGATGGATAGTCAAGATGCTGAGACGACTAACACAACTGAGCCGATGGATCACTCGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | AGGTGGCTGAATAATCACCAGAGCTTCTCATGCCGCTaGGGGAATCTAAAAGAATTATGGGACGATGTAACA | + |
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Preference number: 6 (lower is better) Translates to: RWLNNHQSFSCR*GNLKELWDDVT Trigger: TGTTACATCGTCCCATAATTCTTTTAGATTCCCTCAGCGGCATGAGAAGCTCTGGTGATTATTCAGCCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | TTGCTCTGCACTTTGATCCCGCAAGTGCTTGTCCATTaGAGCCTGAATAGAAGAAACCATTTCCTGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: LLCTLIPQVLVH*SLNRRNHFLQF Trigger: AAATTGCAGGAAATGGTTTCTTCTATTCAGGCTTCAATGGACAAGCACTTGCGGGATCAAAGTGCAGAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CCA 72 bp | GGGAATCTAAAAGAATTATGGGACGATGTAACACATTaGCAAGGCCGAATATGTGGATATTCCTCAGGCCTA | + |
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Preference number: 6 (lower is better) Translates to: GNLKELWDDVTH*QGRICGYSSGL Trigger: TAGGCCTGAGGAATATCCACATATTCGGCCTTGCCAATGTGTTACATCGTCCCATAATTCTTTTAGATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | AGGGAATCTAAAAGAATTATGGGACGATGTAACACATaGGCAAGGCCGAATATGTGGATATTCCTCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RESKRIMGRCNT*ARPNMWIFLRP Trigger: AGGCCTGAGGAATATCCACATATTCGGCCTTGCCAATGTGTTACATCGTCCCATAATTCTTTTAGATTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | TGTACATCAGCAACCAAACTAGGATGGATACCATGTTaGTCCATAAAGACTTCTTCCATAGCAGCAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: CTSATKLGWIPC*SIKTSSIAATS Trigger: GCTGGTTGCTGCTATGGAAGAAGTCTTTATGGACAAACATGGTATCCATCCTAGTTTGGTTGCTGATGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | TCCTCCTCAAGCTTGATGTACTTTTTAATAAGGTCCTaGGGCACACCCCATGCTTTAGGTAACAAATTCATG | + |
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Preference number: 6 (lower is better) Translates to: SSSSLMYFLIRS*GTPHALGNKFM Trigger: CATGAATTTGTTACCTAAAGCATGGGGTGTGCCTCAGGACCTTATTAAAAAGTACATCAAGCTTGAGGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | AGACACAAGGAGTACATTTCTTTGTCAGCTTGCTCCTaGAGTTCCTTAGATGACAGTTTACCAGTAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: RHKEYISLSACS*SSLDDSLPVTA Trigger: TGCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAGGAGCAAGCTGACAAAGAAATGTACTCCTTGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | CTTGTGGCAAATGCTGCTCCCAGTACATCTGCTACATaGCTATCAGTTGTTTCAGTATTCAAATTCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LVANAAPSTSAT*LSVVSVFKFSV Trigger: CACTGAGAATTTGAATACTGAAACAACTGATAGTCATGTAGCAGATGTACTGGGAGCAGCATTTGCCACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 72 bp | ATGCTGCTCCCAGTACATCTGCTACATGACTATCAGTaGTTTCAGTATTCAAATTCTCAGTGCCACCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: MLLPVHLLHDYQ*FQYSNSQCHQL Trigger: TAACTGGTGGCACTGAGAATTTGAATACTGAAACAACTGATAGTCATGTAGCAGATGTACTGGGAGCAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | TTGTGGCAAATGCTGCTCCCAGTACATCTGCTACATGACTATCAGTaGTTTCAGTATTCAAATTCTCAGTGCCACCAGTTAAAGAAAACG | + |
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Preference number: 6 (lower is better) Translates to: LWQMLLPVHLLHDYQ*FQYSNSQCHQLKKT Trigger: CGTTTTCTTTAACTGGTGGCACTGAGAATTTGAATACTGAAACAACTGATAGTCATGTAGCAGATGTACTGGGAGCAGCATTTGCCACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | AAAAAGGTTGTTGAAGGCTTAAGGGTAACCATAGACTaGCGTCCATCGTTAGTTGTTATTCGAATCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KKVVEGLRVTID*RPSLVVIRIFF Trigger: GAAGAAGATTCGAATAACAACTAACGATGGACGGCAGTCTATGGTTACCCTTAAGCCTTCAACAACCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS TCA 72 bp | CATTTCTTTGTCAGCTTGCTCCTGAAGTTCCTTAGATaGCAGTTTACCAGTAACAGCAATCTCTTCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: HFFVSLLLKFLR*QFTSNSNLFLF Trigger: AAACAAGAAGAGATTGCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAGGAGCAAGCTGACAAAGAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS CAA 90 bp | AAAGCTTCTGGAAGATTGTCATACTCTTTACCTTCCCAAAAATGTTaGAATCCACAACCACATTTGCCACCAGTAGACCTAGAATTAGTT | + |
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Preference number: 6 (lower is better) Translates to: KASGRLSYSLPSQKC*NPQPHLPPVDLELV Trigger: AACTAATTCTAGGTCTACTGGTGGCAAATGTGGTTGTGGATTCAAACATTTTTGGGAAGGTAAAGAGTATGACAATCTTCCAGAAGCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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| CDS GCA 72 bp | CCAGTCTATCTTCAGAAGCATTATAAACAAAGGTTTTaGCAGGTAGATGTGGAAAAGTACAATGTTTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PVYLQKHYKQRF*QVDVEKYNVCH Trigger: ATGGCAAACATTGTACTTTTCCACATCTACCTGGCAAAACCTTTGTTTATAATGCTTCTGAAGATAGACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057438.7 |
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