Pregenerated sensors for VCP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028452Ensembl transcript IDs: ENSMUST00000030164.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTTGGCTAGGGTAAGGGAGGACTTGGACAGCATTGAGTATAGATaGTTTACTGTGGTGATGGTGGTGGCAATGCCTTGGTTCACACCA | + |
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Preference number: 1 (lower is better) Translates to: RLARVREDLDSIEYR*FTVVMVVAMPWFTP Trigger: TGGTGTGAACCAAGGCATTGCCACCACCATCACCACAGTAAAGCATCTATACTCAATGCTGTCCAAGTCCTCCCTTACCCTAGCCAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR CCA 90 bp | ATTGAGTATAGATGCTTTACTGTGGTGATGGTGGTGGCAATGCCTTaGTTCACACCACACAGGTTACCTGCACCACCCCAAACTACGACA | + |
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Preference number: 1 (lower is better) Translates to: IEYRCFTVVMVVAMP*FTPHRLPAPPQTTT Trigger: TGTCGTAGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACCACAGTAAAGCATCTATACTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACACCCCTGGTCCCTCTTaGGCAAGCGCCCCCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: GGGNALVHTTQVTCTTPNTPGPS*ASAPSP Trigger: GGGGGAGGGGGCGCTTGCCCAAGAGGGACCAGGGGT...GTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACGTTCAGACTGAGGAATaGAACAGGCCATGGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: GGGNALVHTTQVTCTTPNVQTEE*NRPWAH Trigger: GTGTGCCCATGGCCTGTTCCATTCCTCAGTCTGAAC...GTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCTGAACTGTTCAGACTaGGGAATGGAACAGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: GDGGGNALVHTTQVTCTTLNCSD*GMEQAM Trigger: CATGGCCTGTTCCATTCCTCAGTCTGAACAGTTCAG...GGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR CAA 90 bp | AGGCCCCTCATCCACCTACCCAGGTTGGCTAGGGTAAGGGAGGACTaGGACAGCATTGAGTATAGATGCTTTACTGTGGTGATGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RPLIHLPRLARVRED*DSIEYRCFTVVMVV Trigger: CACCACCATCACCACAGTAAAGCATCTATACTCAATGCTGTCCAAGTCCTCCCTTACCCTAGCCAACCTGGGTAGGTGGATGAGGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTTACTGTGGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTCCCCTGTCCAGAGTCTaGCTGGGGCTGAACTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: MLYCGDGGGNALVHTTQVPLSRV*LGLNCS Trigger: TGAACAGTTCAGCCCCAGTCAGACTCTGGACAGGGG...AACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACCACAGTAAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR-3UTR CAA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAACACCCCTGGTCCCTCTaGGGCAAGCGCCCCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQHPWSL*GKRPLP Trigger: GGGGAGGGGGCGCTTGCCCAAGAGGGACCAGGGGTG...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR TCA 72 bp | GCAACAGGAAACCCCTGTCCAGAGTCTGACTGGGGCTaGACTGTTCAGACTGAGGAATGGAACAGGCCATGG | + |
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Preference number: 3 (lower is better) Translates to: ATGNPCPESDWG*TVQTEEWNRPW Trigger: CCATGGCCTGTTCCATTCCTCAGTCTGAACAGTTCAGCCCCAGTCAGACTCTGGACAGGGGTTTCCTGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR TCA 72 bp | AAATCAACCTACTTTCTATATAAACACCCAGCAAACTaGGGCCCCTCATCCACCTACCCAGGTTGGCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: KSTYFLYKHPAN*GPSSTYPGWLG Trigger: CCCTAGCCAACCTGGGTAGGTGGATGAGGGGCCTCAGTTTGCTGGGTGTTTATATAGAAAGTAGGTTGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR TCA 72 bp | ACTTGGACAGCATTGAGTATAGATGCTTTACTGTGGTaGTGGTGGTGGCAATGCCTTGGTTCACACCACACA | + |
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Preference number: 3 (lower is better) Translates to: TWTALSIDALLW*WWWQCLGSHHT Trigger: TGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACCACAGTAAAGCATCTATACTCAATGCTGTCCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATCTCCACTGCCCTGGCTaGGACCAGCTCCACCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHLHCPG*DQLHPG Trigger: ACCAGGGTGGAGCTGGTCCCAGCCAGGGCAGTGGAG...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATACACACTGCCACCTGTaGCACCTCCACTGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHTHCHL*HLHCPG Trigger: GCCAGGGCAGTGGAGGTGGCACAGGTGGCAGTGTGT...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR TCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATGCTGATGGGTTGCTTTaGCTCAAAGCCCACCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHADGLL*LKAHRK Trigger: CTTCCGGTGGGCTTTGAGTCAAAGCAACCCATCAGC...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GGGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCAAAACCTCGACTCTGCTaGAGTGTCTGGGCGAACATT | + |
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Preference number: 4 (lower is better) Translates to: GQAPPPPGNKVQPGQLAAKPRLC*SVWANI Trigger: AATGTTCGCCCAGACACTGCAGCAGAGTCGAGGTTT...TGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATTTTTTCCGGATGGCCTaGAGAGCAGCCTCTGAACAT | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHFFRMA*RAASEH Trigger: ATGTTCAGAGGCTGCTCTGCAGGCCATCCGGAAAAA...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR TCA 90 bp | GAATGGAACAGGCCATGGGCACACCCCTGGTCCCTCTTGGGCAAGCGCCCCCTCATGGCTTCCTCAAAGTaGTCTCTGCGGATCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: EWNRPWAHPWSLLGKRPLMASSK*SLRISG Trigger: GCCTGAGATCCGCAGAGATCACTTTGAGGAAGCCAT...GAGGGGGCGCTTGCCCAAGAGGGACCAGGGGTGTGCCCATGGCCTGTTCCATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATATCACATGTGCTCTCTaGTTTAGGCCATCCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHITCAL*FRPSMR Trigger: CCTCATGGATGGCCTAAAGCAGAGAGCACATGTGAT...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCTGTGCCACCTCCACTaGCCTGGCTGGGACCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GDGGGNALVHTTQVTCTTLCHLH*PGWDQL Trigger: GAGCTGGTCCCAGCCAGGGCAGTGGAGGTGGCACAG...GGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | CTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATGCTGGCACATCACTTCTGTGTACACACTaGCACCTGTGCCACCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LPQGTRSSQASSLHAGTSLLCTH*HLCHLH Trigger: GTGGAGGTGGCACAGGTGGCAGTGTGTACACAGAAG...TGATGTGCCAGCATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | CTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATGCTGGCACATCATCATCCATCTTGGGCTaGGACAAGGACACCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPQGTRSSQASSLHAGTSSSILG*DKDTTL Trigger: CAGCGTGGTGTCCTTGTCCCAGCCCAAGATGGATGA...TGATGTGCCAGCATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATTTCCCAGGTTACTTGTaGCACCTCTACCACAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHFPGYL*HLYHSF Trigger: GAAACTGTGGTAGAGGTGCCACAAGTAACCTGGGAA...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATGGGACTTTCGCAGATTaGCTTTTAGGATGGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHGTFAD*LLGWQH Trigger: GTGTTGCCATCCTAAAAGCCAATCTGCGAAAGTCCC...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR TCA 90 bp | GAATGGAACAGGCCATGGGCACACCCCTGGTCCCTCTTGGGCAAGCGCCCCCTCGCTTTAGGCCATCCATaGGGGTCAACAACTGAGACA | + |
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Preference number: 4 (lower is better) Translates to: EWNRPWAHPWSLLGKRPLALGHP*GSTTET Trigger: TGTCTCAGTTGTTGACCCTCATGGATGGCCTAAAGC...GAGGGGGCGCTTGCCCAAGAGGGACCAGGGGTGTGCCCATGGCCTGTTCCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR TCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATATTTCTGTCAGGATCTaGTTGATGACTCGGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHISVRI*LMTRSA Trigger: TGCTGACCGAGTCATCAATCAGATCCTGACAGAAAT...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GAATGGAACAGGCCATGGGCACACCCCTGGTCCCTCTTGGGCAAGCGCCCCCTCAGGCTTTACGAAGGTTaGTCTCAGACTCACCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: EWNRPWAHPWSLLGKRPLRLYEG*SQTHQP Trigger: TGGCTGGTGAGTCTGAGAGCAACCTTCGTAAAGCCT...GAGGGGGCGCTTGCCCAAGAGGGACCAGGGGTGTGCCCATGGCCTGTTCCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATGGGTCTATTGGTTGCTaGCATAACTATCACATGTGC | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHGSIGC*HNYHMC Trigger: GCACATGTGATAGTTATGGCAGCAACCAATAGACCC...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GAATGGAACAGGCCATGGGCACACCCCTGGTCCCTCTTGGGCAAGCGCCCCCTCGAAGTGCTGATGGGTTaGTTTGACTCAAAGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: EWNRPWAHPWSLLGKRPLEVLMG*FDSKPT Trigger: GGTGGGCTTTGAGTCAAAGCAACCCATCAGCACTTC...GAGGGGGCGCTTGCCCAAGAGGGACCAGGGGTGTGCCCATGGCCTGTTCCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR TCA 90 bp | GGGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCAGTCGGTTCTTCTGTTTaGGAATGGCTGTTGATAAAT | + |
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Preference number: 4 (lower is better) Translates to: GQAPPPPGNKVQPGQLAAVGSSV*EWLLIN Trigger: ATTTATCAACAGCCATTCTCAAACAGAAGAACCGAC...TGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | CTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATGCTGGCACATCAGAGCTAGCTGCTTCCTaGAACCACCGATGTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: LPQGTRSSQASSLHAGTSELAAS*NHRCHH Trigger: ATGATGACATCGGTGGTTGCAGGAAGCAGCTAGCTC...TGATGTGCCAGCATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | CTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATGCTGGCACATCAGTAGGGCTGGGTCAATaGTGTTGGGTCTATTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LPQGTRSSQASSLHAGTSVGLGQ*CWVYWL Trigger: CAACCAATAGACCCAACAGCATTGACCCAGCCCTAC...TGATGTGCCAGCATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATTCGATGGGTAGAACGTaGATACGTTTGCCATACTTT | + |
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Preference number: 4 (lower is better) Translates to: GKRPLPQGTRSSQASSLHSMGRT*IRLPYF Trigger: AAAGTATGGCAAACGTATCCACGTTCTACCCATCGA...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR TCA 90 bp | GATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCATCCACCCTGGTTCCCTaGAGGGAATCTGAAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: DGGGNALVHTTQVTCTTPSTLVP*RESEAA Trigger: GGCAGCTTCAGATTCCCTTCAGGGAACCAGGGTGGA...TGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| 3UTR CAA 72 bp | CCCAGCAAACTGAGGCCCCTCATCCACCTACCCAGGTaGGCTAGGGTAAGGGAGGACTTGGACAGCATTGAG | + |
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Preference number: 4 (lower is better) Translates to: PSKLRPLIHLPR*ARVREDLDSIE Trigger: CTCAATGCTGTCCAAGTCCTCCCTTACCCTAGCCAACCTGGGTAGGTGGATGAGGGGCCTCAGTTTGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GAATGGAACAGGCCATGGGCACACCCCTGGTCCCTCTTGGGCAAGCGCCCCCTCCAAGTCCACATCATCTaGCAGTTTCATGTTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: EWNRPWAHPWSLLGKRPLQVHII*QFHVLG Trigger: ACCAAGAACATGAAACTGGCAGATGATGTGGACTTG...GAGGGGGCGCTTGCCCAAGAGGGACCAGGGGTGTGCCCATGGCCTGTTCCATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | GTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACTGGCTCCCCCTCACAGTaGATCACTGTGTCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VVAMPWFTPHRLPAPPQTGSPSQ*ITVSGA Trigger: TGCTCCAGACACAGTGATCCACTGTGAGGGGGAGCC...AGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR TCA 90 bp | GAATGGAACAGGCCATGGGCACACCCCTGGTCCCTCTTGGGCAAGCGCCCCCTCGAGTCATGCCAAATTTaGGGAATTTGTCTGGATGTT | + |
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Preference number: 4 (lower is better) Translates to: EWNRPWAHPWSLLGKRPLESCQI*GICLDV Trigger: AACATCCAGACAAATTCCTCAAATTTGGCATGACTC...GAGGGGGCGCTTGCCCAAGAGGGACCAGGGGTGTGCCCATGGCCTGTTCCATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | GATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAGCAGTTCATCCATCTTaGGCTGGGACAAGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: DGGGNALVHTTQVTCTTPAVHPS*AGTRTP Trigger: TGGTGTCCTTGTCCCAGCCCAAGATGGATGAACTGC...TGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | GAATGGAACAGGCCATGGGCACACCCCTGGTCCCTCTTGGGCAAGCGCCCCCTCTTTGAGGAATTTGTCTaGATGTTCCACAGGATACTG | + |
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Preference number: 4 (lower is better) Translates to: EWNRPWAHPWSLLGKRPLFEEFV*MFHRIL Trigger: CAGTATCCTGTGGAACATCCAGACAAATTCCTCAAA...GAGGGGGCGCTTGCCCAAGAGGGACCAGGGGTGTGCCCATGGCCTGTTCCATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACTCACCTCGGAACAACTaGAGTTCATCCATCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGGNALVHTTQVTCTTPNSPRNN*SSSILG Trigger: GCCCAAGATGGATGAACTGCAGTTGTTCCGAGGTGA...GTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCGGCTCCAGTTTCATTTaGCACAGCTCGAGCAATCAG | + |
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Preference number: 4 (lower is better) Translates to: GDGGGNALVHTTQVTCTTGSSFI*HSSSNQ Trigger: CTGATTGCTCGAGCTGTGGCAAATGAAACTGGAGCC...GGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR GCA 90 bp | GGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCTCAAAGTGATCTCTaGGGATCTCAGGCACTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GDGGGNALVHTTQVTCTTPQSDL*GSQALD Trigger: ATCCAGTGCCTGAGATCCGCAGAGATCACTTTGAGG...GGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAACGCAGGATGTCTCAGTaGCAGCTCCACCATCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQRRMSQ*QLHHLL Trigger: AAGGAGATGGTGGAGCTGCCACTGAGACATCCTGCG...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR CCA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAAGCGGATCTCAGGCACTaGATCGTCCTCTTCTACCTC | + |
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Preference number: 4 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQADLRH*IVLFYL Trigger: GAGGTAGAAGAGGACGATCCAGTGCCTGAGATCCGC...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR TCA 90 bp | TACGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTATGAGGGTCAACAACTaGGACACGATGCGACGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YDRNRVGPRPNSLLVIHSMRVNN*DTMRRS Trigger: GGAGCGTCGCATCGTGTCTCAGTTGTTGACCCTCAT...AGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS-3UTR TCA 90 bp | GTTCACACCACACAGGTTACCTGCACCACCCCAAACTACGACAGAAACCGTGTGCTGCCAGGGAATTCATaGCCTCAGCATCAATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHTTQVTCTTPNYDRNRVLPGNS*PQHQWS Trigger: AGACCATTGATGCTGAGGTCATGAATTCCCTGGCAG...CACACGGTTTCTGTCGTAGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTTTACTGTGGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTCCTGAAGCTCACGTTTaGCATCCTCCAGGCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MLYCGDGGGNALVHTTQVPEAHV*HPPGLQ Trigger: TTGGAGGCCTGGAGGATGTCAAACGTGAGCTTCAGG...AACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACCACAGTAAAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCTCCCTGAAGGGAATCTaGAGCTGCCAAAACCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQKPCGPKTQFLAGNSLFSLKGI*SCQNLD Trigger: GTCGAGGTTTTGGCAGCTTCAGATTCCCTTCAGGGA...GAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTTTACTGTGGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTGGGGGCAGCTTGCCGTaGCTTGTCAAAAATTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: MLYCGDGGGNALVHTTQVGGSLP*LVKNFP Trigger: CGGGAAATTTTTGACAAGGCACGGCAAGCTGCCCCC...AACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACCACAGTAAAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR GCA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAAACACAGGGGGCAGCTTaGCGTGCCTTGTCAAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQTQGAA*RALSKI Trigger: AATTTTTGACAAGGCACGGCAAGCTGCCCCCTGTGT...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR GCA 90 bp | CGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCGCCGATGGATTTGTCTaGCTCTCTCGTTCTCGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RQKPCGPKTQFLAGNSLFADGFV*LSRSRL Trigger: TAGGCGAGAACGAGAGAGGCAGACAAATCCATCGGC...GAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | GATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAGAGATGAAGTTGGCCTaGCATTCATTAGCAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGGGNALVHTTQVTCTTPEMKLA*HSLAMA Trigger: AGCCATTGCTAATGAATGCCAGGCCAACTTCATCTC...TGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAATACCTCCATAGCCGATaGATTTGTCTGCCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQYLHSR*ICLPLS Trigger: CGAGAGAGGCAGACAAATCCATCGGCTATGGAGGTA...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACTCTCTGCTGCAGTGTCTaGGCGAACATTTCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVAMPWFTPHRLPAPPQTLCCSV*ANISYF Trigger: GAAGTATGAAATGTTCGCCCAGACACTGCAGCAGAG...AGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCCTGTCTCTACAACTTTaGACTCCACAGCACGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RQKPCGPKTQFLAGNSLFLSLQL*TPQHAS Trigger: GGATGCGTGCTGTGGAGTTCAAAGTTGTAGAGACAG...GAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR GCA 90 bp | GATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCATTTCTCTCTTTTGGGTaGAATGGCATCAAGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DGGGNALVHTTQVTCTTPFLSFG*NGIKLI Trigger: GATGAGCTTGATGCCATTGCACCCAAAAGAGAGAAA...TGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | GTTCACACCACACAGGTTACCTGCACCACCCCAAACTACGACAGAAACCGTGTGCCACTGTGTCATCGATaGGTAGAACGTGGATACGTT | + |
|
Preference number: 4 (lower is better) Translates to: VHTTQVTCTTPNYDRNRVPLCHR*VERGYV Trigger: AACGTATCCACGTTCTACCCATCGATGACACAGTGG...CACACGGTTTCTGTCGTAGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACTGTGGATCACTGTGTCTaGAGCAACAATACAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVAMPWFTPHRLPAPPQTVDHCV*SNNTVR Trigger: CCTTACTGTATTGTTGCTCCAGACACAGTGATCCAC...AGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACGAGTTTTCTCTCTTTTaGGTGCAATGGCATCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGNALVHTTQVTCTTPNEFSLF*VQWHQA Trigger: AGCTTGATGCCATTGCACCCAAAAGAGAGAAAACTC...GTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCCTGGGTCAATGCTGTTaGGTCTATTGGTTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQKPCGPKTQFLAGNSLFLGQCC*VYWLLP Trigger: TGGCAGCAACCAATAGACCCAACAGCATTGACCCAG...GAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | TACGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTCACATCCTTGGCAACTaGGGACTTTCGCAGATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YDRNRVGPRPNSLLVIHSHILGN*GLSQIG Trigger: GCCAATCTGCGAAAGTCCCCAGTTGCCAAGGATGTG...AGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCCCAAATCCACATCCTTaGCAACTGGGGACTTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQKPCGPKTQFLAGNSLFPNPHP*QLGTFA Trigger: TGCGAAAGTCCCCAGTTGCCAAGGATGTGGATTTGG...GAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCGTCGGGCAAAACGCATaGCTTCCTCAAAGTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQKPCGPKTQFLAGNSLFVGQNA*LPQSDL Trigger: GAGATCACTTTGAGGAAGCCATGCGTTTTGCCCGAC...GAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR GCA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAAGTCATCCATAGTAACTaGCAGGGAATTCATGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQVIHSN*QGIHDL Trigger: GAGGTCATGAATTCCCTGGCAGTTACTATGGATGAC...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACTCAATACAGTAAGGGCTaGGATCTGTCTCTACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VVAMPWFTPHRLPAPPQTQYSKG*DLSLQL Trigger: AAGTTGTAGAGACAGATCCCAGCCCTTACTGTATTG...AGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| 3UTR CAA 72 bp | ATCCACCTACCCAGGTTGGCTAGGGTAAGGGAGGACTaGGACAGCATTGAGTATAGATGCTTTACTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IHLPRLARVRED*DSIEYRCFTVV Trigger: CACCACAGTAAAGCATCTATACTCAATGCTGTCCAAGTCCTCCCTTACCCTAGCCAACCTGGGTAGGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCGATTGGCTTTTAGGATaGCAACACGGGACTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQKPCGPKTQFLAGNSLFDWLLG*QHGTSH Trigger: ATGAGAAGTCCCGTGTTGCCATCCTAAAAGCCAATC...GAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACTCGCTGTTATCTTCATTaGTGGCTTCATCAACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: VVAMPWFTPHRLPAPPQTRCYLH*WLHQQL Trigger: TAATTGTTGATGAAGCCATCAATGAAGATAACAGCG...AGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCTTCTTGGTATGGATCTaGAGAATCTCCAAACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQKPCGPKTQFLAGNSLFFLVWI*RISKRP Trigger: AGGACGTTTGGAGATTCTTCAGATCCATACCAAGAA...GAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR GCA 90 bp | TACGACAGAAACCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTGAACGTGGATACGTTTaGCATACTTTACATCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YDRNRVGPRPNSLLVIHSERGYV*HTLHQG Trigger: GCCCTGATGTAAAGTATGGCAAACGTATCCACGTTC...AGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGGTTTCTGTCGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAACTTCTCATCAGGAAGTaGGATATAAATGAGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQLLIRK*DINELI Trigger: GATCAGCTCATTTATATCCCACTTCCTGATGAGAAG...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | GTTCACACCACACAGGTTACCTGCACCACCCCAAACTACGACAGAAACCGTGTGCCAGTTTCATGTTCTTaGTATGGATCTGAAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: VHTTQVTCTTPNYDRNRVPVSCS*YGSEES Trigger: AGATTCTTCAGATCCATACCAAGAACATGAAACTGG...CACACGGTTTCTGTCGTAGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CCA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAAAGTTTACAAGCCCGTTaGCAAATTTCTGTCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQSLQAR*QISVKS Trigger: TGATTTGACAGAAATTTGCCAACGGGCTTGTAAACT...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GAATGGAACAGGCCATGGGCACACCCCTGGTCCCTCTTGGGCAAGCGCCCCCTCGCTGGGTCAATGCTGTaGGGTCTATTGGTTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EWNRPWAHPWSLLGKRPLAGSML*GLLVAA Trigger: GGCAGCAACCAATAGACCCAACAGCATTGACCCAGC...GAGGGGGCGCTTGCCCAAGAGGGACCAGGGGTGTGCCCATGGCCTGTTCCATTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCAATAAATCATCACCTTTaGAATCGGCTCCAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQAPPPPGNKVQPGQLAAINHHL*NRLQRP Trigger: TGGCCTCTGGAGCCGATTCAAAAGGTGATGATTTAT...TGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATGGAGTCATGCCAAATTaGAGGAATTTGTCTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: GKRPLPQGTRSSQASSLHGVMPN*RNLSGC Trigger: ACATCCAGACAAATTCCTCAAATTTGGCATGACTCC...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAGCGCCCCCTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATCAGTTTACAAGCCCGTaGGCAAATTTCTGTCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: GKRPLPQGTRSSQASSLHQFTSP*ANFCQI Trigger: GATTTGACAGAAATTTGCCAACGGGCTTGTAAACTG...ATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAGGGGGCGCTTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCCCAGGGAACAAGGTCCAGCCAGGCCAGCTCGCTGCATGCTGGCACATCAGACTCACCAGCCAATTaGCTCATGATTTCAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: LPQGTRSSQASSLHAGTSDSPAN*LMISGP Trigger: TGGTCCTGAAATCATGAGCAAATTGGCTGGTGAGTC...TGATGTGCCAGCATGCAGCGAGCTGGCCTGGCTGGACCTTGTTCCCTGGGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCTGCAGTTCATCCATCTaGGGCTGGGACAAGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: GDGGGNALVHTTQVTCTTCSSSI*GWDKDT Trigger: GGTGTCCTTGTCCCAGCCCAAGATGGATGAACTGCA...GGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACAAGGCTTTACGAAGGTaGCTCTCAGACTCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGGNALVHTTQVTCTTPNKALRR*LSDSPA Trigger: GGCTGGTGAGTCTGAGAGCAACCTTCGTAAAGCCTT...GTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 90 bp | TTATCGCTGACAGAACGTCGGGCAAAACGCATGGCTTCCTCAAAGTaGTCTCTGCGGATCTCAGGCACTGGATCGTCCTCTTCTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLTERRAKRMASSK*SLRISGTGSSSSTS Trigger: GGAGGTAGAAGAGGACGATCCAGTGCCTGAGATCCGCAGAGATCACTTTGAGGAAGCCATGCGTTTTGCCCGACGTTCTGTCAGCGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACTTGATGGAGATGAAGTaGGCCTGGCATTCATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGGNALVHTTQVTCTTPNLMEMK*AWHSLA Trigger: TGCTAATGAATGCCAGGCCAACTTCATCTCCATCAA...GTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTTTACTGTGGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTAGCAGCTCAGGACCCTaGATGGAGATGAAGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MLYCGDGGGNALVHTTQVSSSGP*MEMKLA Trigger: GGCCAACTTCATCTCCATCAAGGGTCCTGAGCTGCT...AACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACCACAGTAAAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GTTCACACCACACAGGTTACCTGCACCACCCCAAACTACGACAGAAACCGTGTGGGGGACTTTCGCAGATaGGCTTTTAGGATGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: VHTTQVTCTTPNYDRNRVGDFRR*AFRMAT Trigger: TGTTGCCATCCTAAAAGCCAATCTGCGAAAGTCCCC...CACACGGTTTCTGTCGTAGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 90 bp | TTCCCAGGTTACTTGTGGCACCTCTACCACAGTTTCCCGAAGTGCTaGTGGGTTGCTTTGACTCAAAGCCCACCGGAAGTCATCCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: FPGYLWHLYHSFPKC*WVALTQSPPEVIHS Trigger: ACTATGGATGACTTCCGGTGGGCTTTGAGTCAAAGCAACCCATCAGCACTTCGGGAAACTGTGGTAGAGGTGCCACAAGTAACCTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 90 bp | GGAACTCCAAATCCACATCCTTGGCAACTGGGGACTTTCGCAGATTaGCTTTTAGGATGGCAACACGGGACTTCTCATCAGGAAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTPNPHPWQLGTFAD*LLGWQHGTSHQEVG Trigger: TCCCACTTCCTGATGAGAAGTCCCGTGTTGCCATCCTAAAAGCCAATCTGCGAAAGTCCCCAGTTGCCAAGGATGTGGATTTGGAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 90 bp | AAAACGCATGGCTTCCTCAAAGTGATCTCTGCGGATCTCAGGCACTaGATCGTCCTCTTCTACCTCCATAGCCGATGGATTTGTCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTHGFLKVISADLRH*IVLFYLHSRWICLP Trigger: AGGCAGACAAATCCATCGGCTATGGAGGTAGAAGAGGACGATCCAGTGCCTGAGATCCGCAGAGATCACTTTGAGGAAGCCATGCGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACGGTCGGTTCTTCTGTTaGAGAATGGCTGTTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: GGGNALVHTTQVTCTTPNGRFFC*RMAVDK Trigger: TTTATCAACAGCCATTCTCAAACAGAAGAACCGACC...GTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAATCTGTCTCTACAACTTaGAACTCCACAGCACGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQSVSTT*NSTARI Trigger: GATGCGTGCTGTGGAGTTCAAAGTTGTAGAGACAGA...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAAAAAATTTCCCGGACATaGGCCTCAGATTCCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQKISRT*ASDSPN Trigger: GTTTGGGGAATCTGAGGCCAATGTCCGGGAAATTTT...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACTATGATGTCAGGCCTGTaGGTAGCTCCAATGATAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VVAMPWFTPHRLPAPPQTMMSGL*VAPMIN Trigger: GTTTATCATTGGAGCTACCAACAGGCCTGACATCAT...AGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 90 bp | CTGGATGTTCCACAGGATACTGAACCAACTCCTGAAGCTCACGTTTaGCATCCTCCAGGCCTCCAATATCTTCCCAGGTTACTTGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LDVPQDTEPTPEAHV*HPPGLQYLPRLLVA Trigger: TGCCACAAGTAACCTGGGAAGATATTGGAGGCCTGGAGGATGTCAAACGTGAGCTTCAGGAGTTGGTTCAGTATCCTGTGGAACATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 90 bp | CGTCTTTTCTTTCCTTTTAGCAACACCGTGTCACCTCGGAACAACTaGAGTTCATCCATCTTGGGCTGGGACAAGGACACCACGCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RLFFPFSNTVSPRNN*SSSILGWDKDTTLL Trigger: TAACAGCGTGGTGTCCTTGTCCCAGCCCAAGATGGATGAACTGCAGTTGTTCCGAGGTGACACGGTGTTGCTAAAAGGAAAGAAAAGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 90 bp | CCCTGGTTCCCTGAAGGGAATCTGAAGCTGCCAAAACCTCGACTCTaGTGCAGTGTCTGGGCGAACATTTCATACTTCCGAATGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: PWFPEGNLKLPKPRL*CSVWANISYFRMSL Trigger: TAATGACATTCGGAAGTATGAAATGTTCGCCCAGACACTGCAGCAGAGTCGAGGTTTTGGCAGCTTCAGATTCCCTTCAGGGAACCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 90 bp | AGATTGCCAGTGATGCCTTCCACTGTGTCATCGATGGGTAGAACGTaGATACGTTTGCCATACTTTACATCAGGGCATGGCTGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLPVMPSTVSSMGRT*IRLPYFTSGHGWML Trigger: CAGCATCCAGCCATGCCCTGATGTAAAGTATGGCAAACGTATCCACGTTCTACCCATCGATGACACAGTGGAAGGCATCACTGGCAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 90 bp | ATCCTCTCGCTTGATTGGCTCCCCCTCACAGTGGATCACTGTGTCTaGAGCAACAATACAGTAAGGGCTGGGATCTGTCTCTACAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILSLDWLPLTVDHCV*SNNTVRAGICLYNF Trigger: AAAGTTGTAGAGACAGATCCCAGCCCTTACTGTATTGTTGCTCCAGACACAGTGATCCACTGTGAGGGGGAGCCAATCAAGCGAGAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACCTGCACCACCCCAAACTCTCGAGCCTTGGCAATaGAATCTAACTCATCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VVAMPWFTPHRLPAPPQTLEPWQ*NLTHQR Trigger: TCTTTGATGAGTTAGATTCAATTGCCAAGGCTCGAG...AGTTTGGGGTGGTGCAGGTAACCTGTGTGGTGTGAACCAAGGCATTGCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAATACAGGTCATCGTCATaGTCTTCTGTGTACACACTG | + |
|
Preference number: 5 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQYRSSS*SSVYTL Trigger: CAGTGTGTACACAGAAGACAATGACGATGACCTGTA...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 90 bp | CTGGAGCAACAATACAGTAAGGGCTGGGATCTGTCTCTACAACTTTaGACTCCACAGCACGCATCCCACCCCGGACAAGAAAAATATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LEQQYSKGWDLSLQL*TPQHASHPGQEKYL Trigger: GAGATATTTTTCTTGTCCGGGGTGGGATGCGTGCTGTGGAGTTCAAAGTTGTAGAGACAGATCCCAGCCCTTACTGTATTGTTGCTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 90 bp | GCAGTGTCTGGGCGAACATTTCATACTTCCGAATGTCATTATCGCTaGCAGAACGTCGGGCAAAACGCATGGCTTCCTCAAAGTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVSGRTFHTSECHYR*QNVGQNAWLPQSDL Trigger: GAGATCACTTTGAGGAAGCCATGCGTTTTGCCCGACGTTCTGTCAGCGATAATGACATTCGGAAGTATGAAATGTTCGCCCAGACACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 90 bp | TCAGTGGCAGCTCCACCATCTCCTTTATCTGAGCTAGCTGCTTCCTaGAACCACCGATGTCATCATAGCCTACTTCATTCAAGGATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVAAPPSPLSELAAS*NHRCHHSLLHSRIP Trigger: AGGAATCCTTGAATGAAGTAGGCTATGATGACATCGGTGGTTGCAGGAAGCAGCTAGCTCAGATAAAGGAGATGGTGGAGCTGCCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 90 bp | TGGTTCCCTGAAGGGAATCTGAAGCTGCCAAAACCTCGACTCTGCTaGAGTGTCTGGGCGAACATTTCATACTTCCGAATGTCATTATCG | + |
|
Preference number: 5 (lower is better) Translates to: WFPEGNLKLPKPRLC*SVWANISYFRMSLS Trigger: CGATAATGACATTCGGAAGTATGAAATGTTCGCCCAGACACTGCAGCAGAGTCGAGGTTTTGGCAGCTTCAGATTCCCTTCAGGGAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 90 bp | CACATGGTAAGCAGCTCAGGACCCTTGATGGAGATGAAGTTGGCCTaGCATTCATTAGCAATGGCTTTAGCCAGTAAGGTTTTCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: HMVSSSGPLMEMKLA*HSLAMALASKVFPQ Trigger: CTGTGGGAAAACCTTACTGGCTAAAGCCATTGCTAATGAATGCCAGGCCAACTTCATCTCCATCAAGGGTCCTGAGCTGCTTACCATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | CCGTGTGGGCCCAAGACCCAATTCCTTGCTGGTAATTCACTCTTCACCTCCCAATCAACAATTAACCGATaGGGTCGGTTCTTCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCGPKTQFLAGNSLFTSQSTINR*GRFFCL Trigger: CAAACAGAAGAACCGACCCAATCGGTTAATTGTTGA...TTGGGAGGTGAAGAGTGAATTACCAGCAAGGAATTGGGTCTTGGGCCCACACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 90 bp | GAAGGGAATCTGAAGCTGCCAAAACCTCGACTCTGCTGCAGTGTCTaGGCGAACATTTCATACTTCCGAATGTCATTATCGCTGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: EGNLKLPKPRLCCSV*ANISYFRMSLSLTE Trigger: TTCTGTCAGCGATAATGACATTCGGAAGTATGAAATGTTCGCCCAGACACTGCAGCAGAGTCGAGGTTTTGGCAGCTTCAGATTCCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTTTACTGTGGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTATGCTGTTGGGTCTATaGGTTGCTGCCATAACTATC | + |
|
Preference number: 5 (lower is better) Translates to: MLYCGDGGGNALVHTTQVMLLGL*VAAITI Trigger: GATAGTTATGGCAGCAACCAATAGACCCAACAGCAT...AACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACCACAGTAAAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 90 bp | CATCCATCTTGGGCTGGGACAAGGACACCACGCTGTTATCTTCATTaGTGGCTTCATCAACAATTAACCGATTGGGTCGGTTCTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HPSWAGTRTPRCYLH*WLHQQLTDWVGSSV Trigger: AACAGAAGAACCGACCCAATCGGTTAATTGTTGATGAAGCCATCAATGAAGATAACAGCGTGGTGTCCTTGTCCCAGCCCAAGATGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 90 bp | GAGGTCCATAGAAAAGAACGCCTTTGGAGGGAGTCATGCCAAATTTaGGGAATTTGTCTGGATGTTCCACAGGATACTGAACCAACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EVHRKERLWRESCQI*GICLDVPQDTEPTP Trigger: AGGAGTTGGTTCAGTATCCTGTGGAACATCCAGACAAATTCCTCAAATTTGGCATGACTCCCTCCAAAGGCGTTCTTTTCTATGGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 90 bp | AAGAACGCCTTTGGAGGGAGTCATGCCAAATTTGAGGAATTTGTCTaGATGTTCCACAGGATACTGAACCAACTCCTGAAGCTCACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KNAFGGSHAKFEEFV*MFHRILNQLLKLTF Trigger: AAACGTGAGCTTCAGGAGTTGGTTCAGTATCCTGTGGAACATCCAGACAAATTCCTCAAATTTGGCATGACTCCCTCCAAAGGCGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTTTACTGTGGTGATGGTGGTGGCAATGCCTTGGTTCACACCACACAGGTTACGCTGTTATCTTCATaGATGGCTTCATCAACAATT | + |
|
Preference number: 5 (lower is better) Translates to: MLYCGDGGGNALVHTTQVTLLSS*MASSTI Trigger: AATTGTTGATGAAGCCATCAATGAAGATAACAGCGT...AACCTGTGTGGTGTGAACCAAGGCATTGCCACCACCATCACCACAGTAAAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 72 bp | CATCGTCATTGTCTTCTGTGTACACACTGCCACCTGTaGCACCTCCACTGCCCTGGCTGGGACCAGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HRHCLLCTHCHL*HLHCPGWDQLH Trigger: GTGGAGCTGGTCCCAGCCAGGGCAGTGGAGGTGGCACAGGTGGCAGTGTGTACACAGAAGACAATGACGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 72 bp | ACAGAACGTCGGGCAAAACGCATGGCTTCCTCAAAGTaGTCTCTGCGGATCTCAGGCACTGGATCGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TERRAKRMASSK*SLRISGTGSSS Trigger: AGAGGACGATCCAGTGCCTGAGATCCGCAGAGATCACTTTGAGGAAGCCATGCGTTTTGCCCGACGTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 72 bp | GTCGGGCAAAACGCATGGCTTCCTCAAAGTGATCTCTaGGGATCTCAGGCACTGGATCGTCCTCTTCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: VGQNAWLPQSDL*GSQALDRPLLP Trigger: AGGTAGAAGAGGACGATCCAGTGCCTGAGATCCGCAGAGATCACTTTGAGGAAGCCATGCGTTTTGCCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS TCA 72 bp | TACTTGTGGCACCTCTACCACAGTTTCCCGAAGTGCTaGTGGGTTGCTTTGACTCAAAGCCCACCGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: YLWHLYHSFPKC*WVALTQSPPEV Trigger: GACTTCCGGTGGGCTTTGAGTCAAAGCAACCCATCAGCACTTCGGGAAACTGTGGTAGAGGTGCCACAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CCA 72 bp | CTTGATTGGCTCCCCCTCACAGTGGATCACTGTGTCTaGAGCAACAATACAGTAAGGGCTGGGATCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LDWLPLTVDHCV*SNNTVRAGICL Trigger: GAGACAGATCCCAGCCCTTACTGTATTGTTGCTCCAGACACAGTGATCCACTGTGAGGGGGAGCCAATCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CCA 72 bp | TTCATTCAAGGATTCCTCCTCATCCTCTCGCTTGATTaGCTCCCCCTCACAGTGGATCACTGTGTCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FIQGFLLILSLD*LPLTVDHCVWS Trigger: GCTCCAGACACAGTGATCCACTGTGAGGGGGAGCCAATCAAGCGAGAGGATGAGGAGGAATCCTTGAATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CCA 72 bp | GGCTTCCTCAAAGTGATCTCTGCGGATCTCAGGCACTaGATCGTCCTCTTCTACCTCCATAGCCGATGGATT | + |
|
Preference number: 6 (lower is better) Translates to: GFLKVISADLRH*IVLFYLHSRWI Trigger: AATCCATCGGCTATGGAGGTAGAAGAGGACGATCCAGTGCCTGAGATCCGCAGAGATCACTTTGAGGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 72 bp | GCAGCTTGCCGTGCCTTGTCAAAAATTTCCCGGACATaGGCCTCAGATTCCCCAAACCACATGGTAAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AACRALSKISRT*ASDSPNHMVSS Trigger: GCTGCTTACCATGTGGTTTGGGGAATCTGAGGCCAATGTCCGGGAAATTTTTGACAAGGCACGGCAAGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 90 bp | AAGCGACCAAATCGCCGTAGGGCTGGGTCAATGCTGTTGGGTCTATaGGTTGCTGCCATAACTATCACATGTGCTCTCTGCTTTAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KRPNRRRAGSMLLGL*VAAITITCALCFRP Trigger: TGGCCTAAAGCAGAGAGCACATGTGATAGTTATGGCAGCAACCAATAGACCCAACAGCATTGACCCAGCCCTACGGCGATTTGGTCGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 90 bp | TCTCTGTCAAAGCGACCAAATCGCCGTAGGGCTGGGTCAATGCTGTaGGGTCTATTGGTTGCTGCCATAACTATCACATGTGCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSKRPNRRRAGSML*GLLVAAITITCALC Trigger: GCAGAGAGCACATGTGATAGTTATGGCAGCAACCAATAGACCCAACAGCATTGACCCAGCCCTACGGCGATTTGGTCGCTTTGACAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 90 bp | AGGAACTCCAAATCCACATCCTTGGCAACTGGGGACTTTCGCAGATaGGCTTTTAGGATGGCAACACGGGACTTCTCATCAGGAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RNSKSTSLATGDFRR*AFRMATRDFSSGSG Trigger: CCCACTTCCTGATGAGAAGTCCCGTGTTGCCATCCTAAAAGCCAATCTGCGAAAGTCCCCAGTTGCCAAGGATGTGGATTTGGAGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS TCA 72 bp | CAATACAGTAAGGGCTGGGATCTGTCTCTACAACTTTaGACTCCACAGCACGCATCCCACCCCGGACAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QYSKGWDLSLQL*TPQHASHPGQE Trigger: TTCTTGTCCGGGGTGGGATGCGTGCTGTGGAGTTCAAAGTTGTAGAGACAGATCCCAGCCCTTACTGTATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS GCA 72 bp | TTTCCTTTTAGCAACACCGTGTCACCTCGGAACAACTaGAGTTCATCCATCTTGGGCTGGGACAAGGACACC | + |
|
Preference number: 6 (lower is better) Translates to: FPFSNTVSPRNN*SSSILGWDKDT Trigger: GGTGTCCTTGTCCCAGCCCAAGATGGATGAACTGCAGTTGTTCCGAGGTGACACGGTGTTGCTAAAAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 72 bp | CCTGAAGGGAATCTGAAGCTGCCAAAACCTCGACTCTaGTGCAGTGTCTGGGCGAACATTTCATACTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PEGNLKLPKPRL*CSVWANISYFR Trigger: TCGGAAGTATGAAATGTTCGCCCAGACACTGCAGCAGAGTCGAGGTTTTGGCAGCTTCAGATTCCCTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CAA 72 bp | AATCGCCGTAGGGCTGGGTCAATGCTGTTGGGTCTATaGGTTGCTGCCATAACTATCACATGTGCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NRRRAGSMLLGL*VAAITITCALC Trigger: GCAGAGAGCACATGTGATAGTTATGGCAGCAACCAATAGACCCAACAGCATTGACCCAGCCCTACGGCGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CAA 90 bp | CAGCTCCACCACCATCTCCAATATTACCACCTCGAGCCTTGGCAATaGAATCTAACTCATCAAAGAAGAGTACACAGGGGGCAGCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QLHHHLQYYHLEPWQ*NLTHQRRVHRGQLA Trigger: GGCAAGCTGCCCCCTGTGTACTCTTCTTTGATGAGTTAGATTCAATTGCCAAGGCTCGAGGTGGTAATATTGGAGATGGTGGTGGAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 72 bp | TCTAACTCATCAAAGAAGAGTACACAGGGGGCAGCTTaGCGTGCCTTGTCAAAAATTTCCCGGACATTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SNSSKKSTQGAA*RALSKISRTLA Trigger: GGCCAATGTCCGGGAAATTTTTGACAAGGCACGGCAAGCTGCCCCCTGTGTACTCTTCTTTGATGAGTTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 72 bp | GAAGGGAATCTGAAGCTGCCAAAACCTCGACTCTGCTaGAGTGTCTGGGCGAACATTTCATACTTCCGAATG | + |
|
Preference number: 6 (lower is better) Translates to: EGNLKLPKPRLC*SVWANISYFRM Trigger: CATTCGGAAGTATGAAATGTTCGCCCAGACACTGCAGCAGAGTCGAGGTTTTGGCAGCTTCAGATTCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 72 bp | GTGATGCCTTCCACTGTGTCATCGATGGGTAGAACGTaGATACGTTTGCCATACTTTACATCAGGGCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: VMPSTVSSMGRT*IRLPYFTSGHG Trigger: GCCATGCCCTGATGTAAAGTATGGCAAACGTATCCACGTTCTACCCATCGATGACACAGTGGAAGGCATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 72 bp | TGGCAACTGGGGACTTTCGCAGATTGGCTTTTAGGATaGCAACACGGGACTTCTCATCAGGAAGTGGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: WQLGTFADWLLG*QHGTSHQEVGY Trigger: ATATCCCACTTCCTGATGAGAAGTCCCGTGTTGCCATCCTAAAAGCCAATCTGCGAAAGTCCCCAGTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CCA 72 bp | AATCCACATCCTTGGCAACTGGGGACTTTCGCAGATTaGCTTTTAGGATGGCAACACGGGACTTCTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: NPHPWQLGTFAD*LLGWQHGTSHQ Trigger: CTGATGAGAAGTCCCGTGTTGCCATCCTAAAAGCCAATCTGCGAAAGTCCCCAGTTGCCAAGGATGTGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CAA 72 bp | TCCACTGTGTCATCGATGGGTAGAACGTGGATACGTTaGCCATACTTTACATCAGGGCATGGCTGGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: STVSSMGRTWIR*PYFTSGHGWML Trigger: CAGCATCCAGCCATGCCCTGATGTAAAGTATGGCAAACGTATCCACGTTCTACCCATCGATGACACAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CAA 72 bp | AAGCGACCAAATCGCCGTAGGGCTGGGTCAATGCTGTaGGGTCTATTGGTTGCTGCCATAACTATCACATGT | + |
|
Preference number: 6 (lower is better) Translates to: KRPNRRRAGSML*GLLVAAITITC Trigger: ACATGTGATAGTTATGGCAGCAACCAATAGACCCAACAGCATTGACCCAGCCCTACGGCGATTTGGTCGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CAA 72 bp | GATTCCCCAAACCACATGGTAAGCAGCTCAGGACCCTaGATGGAGATGAAGTTGGCCTGGCATTCATTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: DSPNHMVSSSGP*MEMKLAWHSLA Trigger: TGCTAATGAATGCCAGGCCAACTTCATCTCCATCAAGGGTCCTGAGCTGCTTACCATGTGGTTTGGGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS CAA 90 bp | TTGGCCTCAGATTCCCCAAACCACATGGTAAGCAGCTCAGGACCCTaGATGGAGATGAAGTTGGCCTGGCATTCATTAGCAATGGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LASDSPNHMVSSSGP*MEMKLAWHSLAMAL Trigger: TAAAGCCATTGCTAATGAATGCCAGGCCAACTTCATCTCCATCAAGGGTCCTGAGCTGCTTACCATGTGGTTTGGGGAATCTGAGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 72 bp | TGGGCTGGGACAAGGACACCACGCTGTTATCTTCATTaGTGGCTTCATCAACAATTAACCGATTGGGTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: WAGTRTPRCYLH*WLHQQLTDWVG Trigger: ACCGACCCAATCGGTTAATTGTTGATGAAGCCATCAATGAAGATAACAGCGTGGTGTCCTTGTCCCAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS TCA 72 bp | GGGCGAACATTTCATACTTCCGAATGTCATTATCGCTaGCAGAACGTCGGGCAAAACGCATGGCTTCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GRTFHTSECHYR*QNVGQNAWLPQ Trigger: TTGAGGAAGCCATGCGTTTTGCCCGACGTTCTGTCAGCGATAATGACATTCGGAAGTATGAAATGTTCGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 72 bp | GCTCCACCATCTCCTTTATCTGAGCTAGCTGCTTCCTaGAACCACCGATGTCATCATAGCCTACTTCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: APPSPLSELAAS*NHRCHHSLLHS Trigger: TGAATGAAGTAGGCTATGATGACATCGGTGGTTGCAGGAAGCAGCTAGCTCAGATAAAGGAGATGGTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 72 bp | TTGACTCAAAGCCCACCGGAAGTCATCCATAGTAACTaGCAGGGAATTCATGACCTCAGCATCAATGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LTQSPPEVIHSN*QGIHDLSINGL Trigger: GAGACCATTGATGCTGAGGTCATGAATTCCCTGGCAGTTACTATGGATGACTTCCGGTGGGCTTTGAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
||
| CDS GCA 72 bp | TCGTCCTCTTCTACCTCCATAGCCGATGGATTTGTCTaGCTCTCTCGTTCTCGCCTAATCTCACTCTCAATA | + |
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Preference number: 6 (lower is better) Translates to: SSSSTSIADGFV*LSRSRLISLSI Trigger: TATTGAGAGTGAGATTAGGCGAGAACGAGAGAGGCAGACAAATCCATCGGCTATGGAGGTAGAAGAGGACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CCA 72 bp | AGCAGCTCAGGACCCTTGATGGAGATGAAGTTGGCCTaGCATTCATTAGCAATGGCTTTAGCCAGTAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SSSGPLMEMKLA*HSLAMALASKV Trigger: AACCTTACTGGCTAAAGCCATTGCTAATGAATGCCAGGCCAACTTCATCTCCATCAAGGGTCCTGAGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CCA 72 bp | CTGAAGCTGCCAAAACCTCGACTCTGCTGCAGTGTCTaGGCGAACATTTCATACTTCCGAATGTCATTATCG | + |
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Preference number: 6 (lower is better) Translates to: LKLPKPRLCCSV*ANISYFRMSLS Trigger: CGATAATGACATTCGGAAGTATGAAATGTTCGCCCAGACACTGCAGCAGAGTCGAGGTTTTGGCAGCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 72 bp | TTGGGCTGGGACAAGGACACCACGCTGTTATCTTCATaGATGGCTTCATCAACAATTAACCGATTGGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: LGWDKDTTLLSS*MASSTINRLGR Trigger: CCGACCCAATCGGTTAATTGTTGATGAAGCCATCAATGAAGATAACAGCGTGGTGTCCTTGTCCCAGCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 72 bp | ATGGTAAGCAGCTCAGGACCCTTGATGGAGATGAAGTaGGCCTGGCATTCATTAGCAATGGCTTTAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: MVSSSGPLMEMK*AWHSLAMALAS Trigger: ACTGGCTAAAGCCATTGCTAATGAATGCCAGGCCAACTTCATCTCCATCAAGGGTCCTGAGCTGCTTACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 72 bp | AAATCCACATCCTTGGCAACTGGGGACTTTCGCAGATaGGCTTTTAGGATGGCAACACGGGACTTCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: KSTSLATGDFRR*AFRMATRDFSS Trigger: TGATGAGAAGTCCCGTGTTGCCATCCTAAAAGCCAATCTGCGAAAGTCCCCAGTTGCCAAGGATGTGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 90 bp | CCAAACCACATGGTAAGCAGCTCAGGACCCTTGATGGAGATGAAGTaGGCCTGGCATTCATTAGCAATGGCTTTAGCCAGTAAGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: PNHMVSSSGPLMEMK*AWHSLAMALASKVF Trigger: GAAAACCTTACTGGCTAAAGCCATTGCTAATGAATGCCAGGCCAACTTCATCTCCATCAAGGGTCCTGAGCTGCTTACCATGTGGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 90 bp | TCATCCATCTTGGGCTGGGACAAGGACACCACGCTGTTATCTTCATaGATGGCTTCATCAACAATTAACCGATTGGGTCGGTTCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSILGWDKDTTLLSS*MASSTINRLGRFFC Trigger: ACAGAAGAACCGACCCAATCGGTTAATTGTTGATGAAGCCATCAATGAAGATAACAGCGTGGTGTCCTTGTCCCAGCCCAAGATGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 90 bp | ATAGCAGGAGCATTCTTTTCAGCTTCCTCAAAGGCTTTACGAAGGTaGCTCTCAGACTCACCAGCCAATTTGCTCATGATTTCAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: IAGAFFSASSKALRR*LSDSPANLLMISGP Trigger: TGGTCCTGAAATCATGAGCAAATTGGCTGGTGAGTCTGAGAGCAACCTTCGTAAAGCCTTTGAGGAAGCTGAAAAGAATGCTCCTGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 72 bp | CACCATCTCCAATATTACCACCTCGAGCCTTGGCAATaGAATCTAACTCATCAAAGAAGAGTACACAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: HHLQYYHLEPWQ*NLTHQRRVHRG Trigger: CCCCCTGTGTACTCTTCTTTGATGAGTTAGATTCAATTGCCAAGGCTCGAGGTGGTAATATTGGAGATGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CCA 72 bp | TTTGGAGGGAGTCATGCCAAATTTGAGGAATTTGTCTaGATGTTCCACAGGATACTGAACCAACTCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FGGSHAKFEEFV*MFHRILNQLLK Trigger: CTTCAGGAGTTGGTTCAGTATCCTGTGGAACATCCAGACAAATTCCTCAAATTTGGCATGACTCCCTCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 72 bp | GCATTCTTTTCAGCTTCCTCAAAGGCTTTACGAAGGTaGCTCTCAGACTCACCAGCCAATTTGCTCATGATT | + |
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Preference number: 6 (lower is better) Translates to: AFFSASSKALRR*LSDSPANLLMI Trigger: AATCATGAGCAAATTGGCTGGTGAGTCTGAGAGCAACCTTCGTAAAGCCTTTGAGGAAGCTGAAAAGAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 90 bp | ACCACGCTGTTATCTTCATTGATGGCTTCATCAACAATTAACCGATaGGGTCGGTTCTTCTGTTTGAGAATGGCTGTTGATAAATCATCA | + |
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Preference number: 6 (lower is better) Translates to: TTLLSSLMASSTINR*GRFFCLRMAVDKSS Trigger: TGATGATTTATCAACAGCCATTCTCAAACAGAAGAACCGACCCAATCGGTTAATTGTTGATGAAGCCATCAATGAAGATAACAGCGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS CAA 72 bp | TTATCTTCATTGATGGCTTCATCAACAATTAACCGATaGGGTCGGTTCTTCTGTTTGAGAATGGCTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LSSLMASSTINR*GRFFCLRMAVD Trigger: ATCAACAGCCATTCTCAAACAGAAGAACCGACCCAATCGGTTAATTGTTGATGAAGCCATCAATGAAGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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| CDS TCA 72 bp | CATCAACAATTAACCGATTGGGTCGGTTCTTCTGTTTaGGAATGGCTGTTGATAAATCATCACCTTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: HQQLTDWVGSSV*EWLLINHHLLN Trigger: ATTCAAAAGGTGATGATTTATCAACAGCCATTCTCAAACAGAAGAACCGACCCAATCGGTTAATTGTTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030164.8 |
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