Pregenerated sensors for VAT1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046844Ensembl transcript IDs: ENSMUST00000049509.7, ENSMUST00000150963.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCAGGAAACAACCACGAGAGGGAAGGAAGGTCCACGGGATAACTaGCTGATTCCGGTTGTCCCTCACCCACCCACCCTCCTGTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LQETTTRGKEGPRDN*LIPVVPHPPTLLFF Trigger: GAAGAACAGGAGGGTGGGTGGGTGAGGGACAACCGGAATCAGTCAGTTATCCCGTGGACCTTCCTTCCCTCTCGTGGTTGTTTCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CCA 90 bp | ACTGCAGACAAACACGACACACACTGGACTACAGCATTGGTTCACTaGGGCACAGAAGAGTTCTCCTGGCGGCCATCTTCTTCCCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: TADKHDTHWTTALVH*GTEEFSWRPSSSQP Trigger: TGGCTGGGAAGAAGATGGCCGCCAGGAGAACTCTTCTGTGCCCCAGTGAACCAATGCTGTAGTCCAGTGTGTGTCGTGTTTGTCTGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 90 bp | CAGAGCTCCGTGACAACACCTTTCAATCAAGCGTGGCCTGGTTTCTaGCCTTGGGCCCTGTGGGCCAGTATTAGTTTGCAAGGCTATTCT | + |
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Preference number: 1 (lower is better) Translates to: QSSVTTPFNQAWPGF*PWALWASISLQGYS Trigger: AGAATAGCCTTGCAAACTAATACTGGCCCACAGGGCCCAAGGTCAGAAACCAGGCCACGCTTGATTGAAAGGTGTTGTCACGGAGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 90 bp | GGACCCAAAGAAGGATGGGTTTGCTTTAAGGGAGAGGGGAGAGCGTaGTACACAGACCAGGAAGGGACACAATACTGCATGGAATGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GPKEGWVCFKGEGRA*YTDQEGTQYCMEWD Trigger: ATCCCATTCCATGCAGTATTGTGTCCCTTCCTGGTCTGTGTATCACGCTCTCCCCTCTCCCTTAAAGCAAACCCATCCTTCTTTGGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR GCA 90 bp | GATCGAGATAAAGGAACACGACAAATGACAGGTGAGTGGCTACTTTaGAAACCAAGCGGGGGAACTGTGGAGACAAGTTCCTTCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: DRDKGTRQMTGEWLL*KPSGGTVETSSFPA Trigger: GGCTGGGAAGGAACTTGTCTCCACAGTTCCCCCGCTTGGTTTGCAAAGTAGCCACTCACCTGTCATTTGTCGTGTTCCTTTATCTCGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CCA 90 bp | AACAGCTTCTTAGCTTGGCTGACTGCAGACAAACACGACACACACTaGACTACAGCATTGGTTCACTGGGGCACAGAAGAGTTCTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: NSFLAWLTADKHDTH*TTALVHWGTEEFSW Trigger: CCAGGAGAACTCTTCTGTGCCCCAGTGAACCAATGCTGTAGTCCAGTGTGTGTCGTGTTTGTCTGCAGTCAGCCAAGCTAAGAAGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 90 bp | TTTCAGAGGAGAGATCTCTGTAGCTTTCCCTTAGACAGACGCTGTTaGACCACCTCTATCCAGGAAAGAACCCACATCTGCCTCCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: FQRRDLCSFPLDRRC*TTSIQERTHICLPR Trigger: CCTAGGGAGGCAGATGTGGGTTCTTTCCTGGATAGAGGTGGTTCAACAGCGTCTGTCTAAGGGAAAGCTACAGAGATCTCTCCTCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 90 bp | GCACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCAGATaGTGGGCAGCCACCATCTGTGTCCCTCGTGTGTGTTACACATTA | + |
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Preference number: 1 (lower is better) Translates to: APWFCVLEDHALVVR*WAATICVPRVCYTL Trigger: TAATGTGTAACACACACGAGGGACACAGATGGTGGCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 90 bp | AGTCATCATCACAAGATCAGGATCGAGATAAAGGAACACGACAAATaGCAGGTGAGTGGCTACTTTGCAAACCAAGCGGGGGAACTGTGG | + |
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Preference number: 1 (lower is better) Translates to: SHHHKIRIEIKEHDK*QVSGYFANQAGELW Trigger: CCACAGTTCCCCCGCTTGGTTTGCAAAGTAGCCACTCACCTGTCATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CCA 90 bp | TGGCACTTAATTCCAAACACAACAGTGATCAACAGCTTCTTAGCTTaGCTGACTGCAGACAAACACGACACACACTGGACTACAGCATTG | + |
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Preference number: 1 (lower is better) Translates to: WHLIPNTTVINSFLA*LTADKHDTHWTTAL Trigger: CAATGCTGTAGTCCAGTGTGTGTCGTGTTTGTCTGCAGTCAGCCAAGCTAAGAAGCTGTTGATCACTGTTGTGTTTGGAATTAAGTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 90 bp | AGAATTGTTTCCTTTCAAGCTGGAATGGTGAACAGGGTATTTGATTaGGCAGTTTGGCCTCCAACCTCTAAGGAACCTGCAAATCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: RIVSFQAGMVNRVFD*AVWPPTSKEPANQH Trigger: GTGCTGATTTGCAGGTTCCTTAGAGGTTGGAGGCCAAACTGCTCAATCAAATACCCTGTTCACCATTCCAGCTTGAAAGGAAACAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 90 bp | CCCTGTCACGGAGAGGAAAGACTCCCTTCAGGTAAATATTTGGCATaGAGAAGTCATCATCACAAGATCAGGATCGAGATAAAGGAACAC | + |
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Preference number: 1 (lower is better) Translates to: PCHGEERLPSGKYLA*RSHHHKIRIEIKEH Trigger: GTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACTTCTTCATGCCAAATATTTACCTGAAGGGAGTCTTTCCTCTCCGTGACAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CCA 90 bp | GAATCTGACTGGCACTCTTTCGCATATTCTCACCCCTTGGCCTATTaGCTGGTAGCTTCTTTTCTCATCTTCATATTTGACTTTCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: ESDWHSFAYSHPLAY*LVASFLIFIFDFPC Trigger: ACAGGGAAAGTCAAATATGAAGATGAGAAAAGAAGCTACCAGCCAATAGGCCAAGGGGTGAGAATATGCGAAAGAGTGCCAGTCAGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR TCA 90 bp | CGCAGGGACGTAGCACTTAAGAGGGAAAGTGACAAAGTAACTGCTTGGAGAAATGCGTGGCCTGGTTTCTaGCCTTGGGCCCTGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: RRDVALKRESDKVTAWRNAWPGF*PWALWA Trigger: GGCCCACAGGGCCCAAGGTCAGAAACCAGGCCACGC...ATTTCTCCAAGCAGTTACTTTGTCACTTTCCCTCTTAAGTGCTACGTCCCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CAA 90 bp | GCTTGGCTGACTGCAGACAAACACGACACACACTGGACTACAGCATaGGTTCACTGGGGCACAGAAGAGTTCTCCTGGCGGCCATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: AWLTADKHDTHWTTA*VHWGTEEFSWRPSS Trigger: AGAAGATGGCCGCCAGGAGAACTCTTCTGTGCCCCAGTGAACCAATGCTGTAGTCCAGTGTGTGTCGTGTTTGTCTGCAGTCAGCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CCA 90 bp | AAACAGCCTCACTGCAGAGAGCGGAGACCCCTCTTCCTCTGTGGTAACTGGTGTCCATGCTTAGAGGCATaGCTGATTGTTGGCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: KQPHCRERRPLFLCGNWCPCLEA*LIVGRQ Trigger: TTGCCTGCCAACAATCAGCCATGCCTCTAAGCATGG...ACACCAGTTACCACAGAGGAAGAGGGGTCTCCGCTCTCTGCAGTGAGGCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CAA 90 bp | CCTGCAAATCAGCACCATGGTTTTGTGTGTTGGAGGATCATGCACTaGTCGTCAGATGATGGGCAGCCACCATCTGTGTCCCTCGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PANQHHGFVCWRIMH*SSDDGQPPSVSLVC Trigger: ACACACGAGGGACACAGATGGTGGCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGCTGATTTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR TCA 90 bp | TCACCCTCAGATGCTCTCTTTCTGTGTTCTCGGGAGAGGGAGAGGGTTTTCATGAGAAGAGTGGGGATCTaGACAGAGCTCCGTGACAAC | + |
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Preference number: 2 (lower is better) Translates to: SPSDALFLCSRERERVFMRRVGI*TELRDN Trigger: GTTGTCACGGAGCTCTGTTCAGATCCCCACTCTTCT...CATGAAAACCCTCTCCCTCTCCCGAGAACACAGAAAGAGAGCATCTGAGGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CCA 90 bp | TCACCCTCAGATGCTCTCTTTCTGTGTTCTCGGGAGAGGGAGAGGGTTTTCATGAAACACGACACACACTaGACTACAGCATTGGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SPSDALFLCSRERERVFMKHDTH*TTALVH Trigger: GTGAACCAATGCTGTAGTCCAGTGTGTGTCGTGTTT...CATGAAAACCCTCTCCCTCTCCCGAGAACACAGAAAGAGAGCATCTGAGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CCA 90 bp | CGATGTTCGGTTCGTTCTAGTAAAGCTCGACCTTCCCAGAAGCCTTCGAAGCTCAACAGCTTCTTAGCTTaGCTGACTGCAGACAAACAC | + |
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Preference number: 2 (lower is better) Translates to: RCSVRSSKARPSQKPSKLNSFLA*LTADKH Trigger: GTGTTTGTCTGCAGTCAGCCAAGCTAAGAAGCTGTT...GAGCTTCGAAGGCTTCTGGGAAGGTCGAGCTTTACTAGAACGAACCGAACATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR GCA 90 bp | ACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCAGATGATGGGCAGCGGGCCAGTATTAGTTTaGAAGGCTATTCTAGAACCG | + |
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Preference number: 2 (lower is better) Translates to: TMVLCVGGSCTCRQMMGSGPVLV*KAILEP Trigger: CGGTTCTAGAATAGCCTTGCAAACTAATACTGGCCC...GCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTGCCATGCTTAGAGGCATGGCTGATTGTTGGCAGGCAAAGAGTGTCATTGGACCCAAAGAAGGATaGGTTTGCTTTAAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: VSAMLRGMADCWQAKSVIGPKEG*VCFKGE Trigger: CTCTCCCTTAAAGCAAACCCATCCTTCTTTGGGTCC...AATGACACTCTTTGCCTGCCAACAATCAGCCATGCCTCTAAGCATGGCACTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR TCA 90 bp | ACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCAGATGATGGGCAGCGCAAGAGAAACCAGTTaGCTTTTCAACCCCAAATAC | + |
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Preference number: 2 (lower is better) Translates to: TMVLCVGGSCTCRQMMGSARETS*LFNPKY Trigger: GTATTTGGGGTTGAAAAGTCAACTGGTTTCTCTTGC...GCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR GCA 90 bp | AACCTGCAAATCAGCACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCTTAGCTTGGCTGACTaGAGACAAACACGACACACA | + |
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Preference number: 2 (lower is better) Translates to: NLQISTMVLCVGGSCTCRLSLAD*RQTRHT Trigger: TGTGTGTCGTGTTTGTCTGCAGTCAGCCAAGCTAAG...ACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGCTGATTTGCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAAGCCTTCGAAGCTCCCTTAAGGCAAACATAAACTCTTTACACTTCCTCGAAGGGACACAATACTaGATGGAATGGGATTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PRSLRSSLKANINSLHFLEGTQY*MEWDWH Trigger: GTGCCAATCCCATTCCATGCAGTATTGTGTCCCTTC...GAGGAAGTGTAAAGAGTTTATGTTTGCCTTAAGGGAGCTTCGAAGGCTTCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CCA 90 bp | CTTTTCTCATCTTCATATTTGACTTTCCCTGTCACGGAGAGGAAAGACTCCCTTACAGAAGAGTTCTCCTaGCGGCCATCTTCTTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LFSSSYLTFPVTERKDSLTEEFS*RPSSSQ Trigger: CTGGGAAGAAGATGGCCGCCAGGAGAACTCTTCTGT...AAGGGAGTCTTTCCTCTCCGTGACAGGGAAAGTCAAATATGAAGATGAGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGGATGGGTTTGCTTTAAGGGAGAGGGGAGAGCGTGATACACAGACCAGGCAATACTGCATGGAATaGGATTGGCACTTAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: KKDGFALRERGERDTQTRQYCME*DWHLIP Trigger: TGGAATTAAGTGCCAATCCCATTCCATGCAGTATTG...CCTGGTCTGTGTATCACGCTCTCCCCTCTCCCTTAAAGCAAACCCATCCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAAGCCTTCGAAGCTCCCTTAAGGCAAACATAAACTCTTTACACTTCCTCAAGGAACACGACAAATaGCAGGTGAGTGGCTACTTT | + |
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Preference number: 2 (lower is better) Translates to: PRSLRSSLKANINSLHFLKEHDK*QVSGYF Trigger: AAAGTAGCCACTCACCTGTCATTTGTCGTGTTCCTT...GAGGAAGTGTAAAGAGTTTATGTTTGCCTTAAGGGAGCTTCGAAGGCTTCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CAA 90 bp | TTGGCACTTAATTCCAAACACAACAGTGATCAACAGCTTCTTAGCTaGGCTGACTGCAGACAAACACGACACACACTGGACTACAGCATT | + |
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Preference number: 2 (lower is better) Translates to: LALNSKHNSDQQLLS*ADCRQTRHTLDYSI Trigger: AATGCTGTAGTCCAGTGTGTGTCGTGTTTGTCTGCAGTCAGCCAAGCTAAGAAGCTGTTGATCACTGTTGTGTTTGGAATTAAGTGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CAA 90 bp | GTGATACACAGACCAGGAAGGGACACAATACTGCATGGAATGGGATaGGCACTTAATTCCAAACACAACAGTGATCAACAGCTTCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: VIHRPGRDTILHGMG*ALNSKHNSDQQLLS Trigger: GCTAAGAAGCTGTTGATCACTGTTGTGTTTGGAATTAAGTGCCAATCCCATTCCATGCAGTATTGTGTCCCTTCCTGGTCTGTGTATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGAAGTCATCATCACAAGATCAGGATCGAGATAAAGGAACACGACAAATGGGTGAGTGGCTACTTTaGAAACCAAGCGGGGGAACT | + |
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Preference number: 2 (lower is better) Translates to: MKKSSSQDQDRDKGTRQMGEWLL*KPSGGT Trigger: AGTTCCCCCGCTTGGTTTGCAAAGTAGCCACTCACC...CATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACTTCTTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CCA 90 bp | AACCTGCAAATCAGCACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTTTTGCTCATGGGATATaGTTTCAGAGGAGAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: NLQISTMVLCVGGSCTCRFAHGI*FQRRDL Trigger: GAGATCTCTCCTCTGAAACCATATCCCATGAGCAAA...ACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGCTGATTTGCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 72 bp | CCACGAGAGGGAAGGAAGGTCCACGGGATAACTGACTaGTTCCGGTTGTCCCTCACCCACCCACCCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: PREGRKVHGITD*FRLSLTHPPSC Trigger: ACAGGAGGGTGGGTGGGTGAGGGACAACCGGAATCAGTCAGTTATCCCGTGGACCTTCCTTCCCTCTCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR GCA 72 bp | AGAAGGGCTGGGGAGGGAGGCAATAAACAGCCTCACTaGAGAGAGCGGAGACCCCTCTTCCTCTGTGGTAAC | + |
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Preference number: 3 (lower is better) Translates to: RRAGEGGNKQPH*RERRPLFLCGN Trigger: GTTACCACAGAGGAAGAGGGGTCTCCGCTCTCTGCAGTGAGGCTGTTTATTGCCTCCCTCCCCAGCCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR GCA 72 bp | CTCCTGTTCTTCATGGTGCCGCTGCTCACCCTCAGATaGTCTCTTTCTGTGTTCTCGGGAGAGGGAGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: LLFFMVPLLTLR*SLSVFSGEGEG Trigger: ACCCTCTCCCTCTCCCGAGAACACAGAAAGAGAGCATCTGAGGGTGAGCAGCGGCACCATGAAGAACAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CCA 72 bp | GTGAGTGGCTACTTTGCAAACCAAGCGGGGGAACTGTaGAGACAAGTTCCTTCCCAGCCCACACAGGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: VSGYFANQAGEL*RQVPSQPTQEN Trigger: ATTTTCCTGTGTGGGCTGGGAAGGAACTTGTCTCCACAGTTCCCCCGCTTGGTTTGCAAAGTAGCCACTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CAA 90 bp | ACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCAGATGATGGGCAGCAGGCAAAGAGTGTCATaGGCCCGAAGAAGAGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: TMVLCVGGSCTCRQMMGSRQRVS*ARRRVG Trigger: CCCCACTCTTCTTCGGGCCAATGACACTCTTTGCCT...GCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CAA 90 bp | CCCAGAAGCCTTCGAAGCTCCCTTAAGGCAAACATAAACTCTTTACACTTCCTCCAAGGGAGCTCTTCCTaGGGAAAGGCGTTTCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: PRSLRSSLKANINSLHFLQGSSS*GKAFPG Trigger: CCCTGGAAACGCCTTTCCCAAGGAAGAGCTCCCTTG...GAGGAAGTGTAAAGAGTTTATGTTTGCCTTAAGGGAGCTTCGAAGGCTTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CAA 90 bp | TCACCCTCAGATGCTCTCTTTCTGTGTTCTCGGGAGAGGGAGAGGGTTTTCATGTCACCCCTTGGCCTATaGGCTGGTAGCTTCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: SPSDALFLCSRERERVFMSPLGL*AGSFFS Trigger: AGAAAAGAAGCTACCAGCCAATAGGCCAAGGGGTGA...CATGAAAACCCTCTCCCTCTCCCGAGAACACAGAAAGAGAGCATCTGAGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 72 bp | GAAGGATGGGTTTGCTTTAAGGGAGAGGGGAGAGCGTaGTACACAGACCAGGAAGGGACACAATACTGCATG | + |
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Preference number: 3 (lower is better) Translates to: EGWVCFKGEGRA*YTDQEGTQYCM Trigger: CATGCAGTATTGTGTCCCTTCCTGGTCTGTGTATCACGCTCTCCCCTCTCCCTTAAAGCAAACCCATCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 72 bp | GTGACAACACCTTTCAATCAAGCGTGGCCTGGTTTCTaGCCTTGGGCCCTGTGGGCCAGTATTAGTTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: VTTPFNQAWPGF*PWALWASISLQ Trigger: TTGCAAACTAATACTGGCCCACAGGGCCCAAGGTCAGAAACCAGGCCACGCTTGATTGAAAGGTGTTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR TCA 72 bp | TTTTGTGTGTTGGAGGATCATGCACTTGTCGTCAGATaGTGGGCAGCCACCATCTGTGTCCCTCGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: FCVLEDHALVVR*WAATICVPRVC Trigger: ACACACACGAGGGACACAGATGGTGGCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CCA 72 bp | TTAGCTTGGCTGACTGCAGACAAACACGACACACACTaGACTACAGCATTGGTTCACTGGGGCACAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LAWLTADKHDTH*TTALVHWGTEE Trigger: CTCTTCTGTGCCCCAGTGAACCAATGCTGTAGTCCAGTGTGTGTCGTGTTTGTCTGCAGTCAGCCAAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CCA 72 bp | CTGGTAAGTGCCATGCTTAGAGGCATGGCTGATTGTTaGCAGGCAAAGAGTGTCATTGGCCCGAAGAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: LVSAMLRGMADC*QAKSVIGPKKS Trigger: ACTCTTCTTCGGGCCAATGACACTCTTTGCCTGCCAACAATCAGCCATGCCTCTAAGCATGGCACTTACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR CCA 72 bp | TGCAGAGAGCGGAGACCCCTCTTCCTCTGTGGTAACTaGTGTTACTTCCAAAGCCGATTAGAGAGGACAAGA | + |
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Preference number: 3 (lower is better) Translates to: CRERRPLFLCGN*CYFQSRLERTR Trigger: TCTTGTCCTCTCTAATCGGCTTTGGAAGTAACACCAGTTACCACAGAGGAAGAGGGGTCTCCGCTCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CAA 90 bp | CGATGTTCGGTTCGTTCTAGTAAAGCTCGACCTTCCCAGAAGCCTTCGAAGCTCCAACAGCTTCTTAGCTaGGCTGACTGCAGACAAACA | + |
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Preference number: 3 (lower is better) Translates to: RCSVRSSKARPSQKPSKLQQLLS*ADCRQT Trigger: TGTTTGTCTGCAGTCAGCCAAGCTAAGAAGCTGTTG...GAGCTTCGAAGGCTTCTGGGAAGGTCGAGCTTTACTAGAACGAACCGAACATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| 3UTR-3UTR CAA 90 bp | AAACAGCCTCACTGCAGAGAGCGGAGACCCCTCTTCCTCTGTGGTAACTGGTGTGGCAAGAGAAACCAGTaGACTTTTCAACCCCAAATA | + |
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Preference number: 3 (lower is better) Translates to: KQPHCRERRPLFLCGNWCGKRNQ*TFQPQI Trigger: TATTTGGGGTTGAAAAGTCAACTGGTTTCTCTTGCC...ACACCAGTTACCACAGAGGAAGAGGGGTCTCCGCTCTCTGCAGTGAGGCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR-3UTR CAA 90 bp | CGATGTTCGGTTCGTTCTAGTAAAGCTCGACCTTCCCAGAAGCCTTCGAAGCTCAGGACGTTTAGAAACTaGGAACACCAACCCAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RCSVRSSKARPSQKPSKLRTFRN*EHQPKV Trigger: GACCTTGGGTTGGTGTTCCAAGTTTCTAAACGTCCT...GAGCTTCGAAGGCTTCTGGGAAGGTCGAGCTTTACTAGAACGAACCGAACATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR-3UTR CAA 90 bp | TCACCCTCAGATGCTCTCTTTCTGTGTTCTCGGGAGAGGGAGAGGGTTTTCATGACAAACCAAACAGGTTaGGGGAGAGATAACGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPSDALFLCSRERERVFMTNQTG*GRDNVP Trigger: TGGGACGTTATCTCTCCCCAAACCTGTTTGGTTTGT...CATGAAAACCCTCTCCCTCTCCCGAGAACACAGAAAGAGAGCATCTGAGGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR GCA 72 bp | CAAATCAGCACCATGGTTTTGTGTGTTGGAGGATCATaGACTTGTCGTCAGATGATGGGCAGCCACCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: QISTMVLCVGGS*TCRQMMGSHHL Trigger: CAGATGGTGGCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGCTGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGAAGCCTTCGAAGCTCCCTTAAGGCAAACATAAACTCTTTACACTTCCTCCACTGGACTACAGCATaGGTTCACTGGGGCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PRSLRSSLKANINSLHFLHWTTA*VHWGTE Trigger: TTCTGTGCCCCAGTGAACCAATGCTGTAGTCCAGTG...GAGGAAGTGTAAAGAGTTTATGTTTGCCTTAAGGGAGCTTCGAAGGCTTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR TCA 72 bp | AGAGATCTCTGTAGCTTTCCCTTAGACAGACGCTGTTaGACCACCTCTATCCAGGAAAGAACCCACATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RDLCSFPLDRRC*TTSIQERTHIC Trigger: GCAGATGTGGGTTCTTTCCTGGATAGAGGTGGTTCAACAGCGTCTGTCTAAGGGAAAGCTACAGAGATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR TCA 72 bp | CACAAGATCAGGATCGAGATAAAGGAACACGACAAATaGCAGGTGAGTGGCTACTTTGCAAACCAAGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HKIRIEIKEHDK*QVSGYFANQAG Trigger: CCCCGCTTGGTTTGCAAAGTAGCCACTCACCTGTCATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR-3UTR CAA 90 bp | AACCTGCAAATCAGCACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCTGCATGGAATGGGATaGGCACTTAATTCCAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: NLQISTMVLCVGGSCTCRLHGMG*ALNSKH Trigger: GTGTTTGGAATTAAGTGCCAATCCCATTCCATGCAG...ACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGCTGATTTGCAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR CCA 72 bp | GACCAGGAAGGGACACAATACTGCATGGAATGGGATTaGCACTTAATTCCAAACACAACAGTGATCAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: DQEGTQYCMEWD*HLIPNTTVINS Trigger: GCTGTTGATCACTGTTGTGTTTGGAATTAAGTGCCAATCCCATTCCATGCAGTATTGTGTCCCTTCCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR CCA 72 bp | TCAACCCCAAATACTGTCTTCAAGGGAGCTCTTCCTTaGGAAAGGCGTTTCCAGGGAAGGAGCTTTAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: STPNTVFKGALP*ERRFQGRSFKI Trigger: TATTTTAAAGCTCCTTCCCTGGAAACGCCTTTCCCAAGGAAGAGCTCCCTTGAAGACAGTATTTGGGGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR TCA 72 bp | CTATTGGCTGGTAGCTTCTTTTCTCATCTTCATATTTaGCTTTCCCTGTCACGGAGAGGAAAGACTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LLAGSFFSHLHI*LSLSRRGKTPF Trigger: GAAGGGAGTCTTTCCTCTCCGTGACAGGGAAAGTCAAATATGAAGATGAGAAAAGAAGCTACCAGCCAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR TCA 72 bp | AGAGGACAAGAATTGTTTCCTTTCAAGCTGGAATGGTaGACAGGGTATTTGATTGAGCAGTTTGGCCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RGQELFPFKLEW*TGYLIEQFGLQ Trigger: TTGGAGGCCAAACTGCTCAATCAAATACCCTGTTCACCATTCCAGCTTGAAAGGAAACAATTCTTGTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR TCA 72 bp | TCTGTGTTCTCGGGAGAGGGAGAGGGTTTTCATGTGTaGTCAATGGTTTTCCAGAATGAAACAAACCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SVFSGEGEGFHV*SMVFQNETNQT Trigger: TGTTTGGTTTGTTTCATTCTGGAAAACCATTGATCACACATGAAAACCCTCTCCCTCTCCCGAGAACACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR CCA 72 bp | CAATGGTTTTCCAGAATGAAACAAACCAAACAGGTTTaGGGAGAGATAACGTCCCAAGGTTTCTCAGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QWFSRMKQTKQV*GEITSQGFSVV Trigger: TACAACTGAGAAACCTTGGGACGTTATCTCTCCCCAAACCTGTTTGGTTTGTTTCATTCTGGAAAACCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGATGGGTTTGCTTTAAGGGAGAGGGGAGAGCGTGATACACAGACCAGGCTCTTCTTCCTCCCCTaGCTCGCTGGTCTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKDGFALRERGERDTQTRLFFLP*LAGLCA Trigger: AGCACAGAGACCAGCGAGGCAGGGGAGGAAGAAGAG...CCTGGTCTGTGTATCACGCTCTCCCCTCTCCCTTAAAGCAAACCCATCCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR CAA 72 bp | ACTGCAGACAAACACGACACACACTGGACTACAGCATaGGTTCACTGGGGCACAGAAGAGTTCTCCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TADKHDTHWTTA*VHWGTEEFSWR Trigger: CCGCCAGGAGAACTCTTCTGTGCCCCAGTGAACCAATGCTGTAGTCCAGTGTGTGTCGTGTTTGTCTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR GCA 90 bp | GTAAGTGCCATGCTTAGAGGCATGGCTGATTGTTGGCAGGCAAAGAGTGTCATTGCACGAGCACGGACATaGCTTCGCGGAGGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSAMLRGMADCWQAKSVIARART*LRGGWQ Trigger: TTGCCAACCTCCGCGAAGGCATGTCCGTGCTCGTGC...AATGACACTCTTTGCCTGCCAACAATCAGCCATGCCTCTAAGCATGGCACTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTCATCTTCATATTTGACTTTCCCTGTCACGGAGAGGAAAGACTCCCTTACAGCGCGCATCTCCTaGGCATCCCCGAGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSSSYLTFPVTERKDSLTARIS*ASPRRW Trigger: CCACCGCCTCGGGGATGCCCAGGAGATGCGCGCTGT...AAGGGAGTCTTTCCTCTCCGTGACAGGGAAAGTCAAATATGAAGATGAGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGCCATGCTTAGAGGCATGGCTGATTGTTGGCAGGCAAAGAGTGTCATTCCTCCCCTGCCTCGCTaGTCTCTGTGCTGTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSAMLRGMADCWQAKSVIPPLPR*SLCCHW Trigger: CCAATGACAGCACAGAGACCAGCGAGGCAGGGGAGG...AATGACACTCTTTGCCTGCCAACAATCAGCCATGCCTCTAAGCATGGCACTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR CAA 72 bp | CAGCACCATGGTTTTGTGTGTTGGAGGATCATGCACTaGTCGTCAGATGATGGGCAGCCACCATCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHHGFVCWRIMH*SSDDGQPPSVS Trigger: GGACACAGATGGTGGCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR TCA 90 bp | ACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCAGATGATGGGCAGCGTCCACGCCTTCAGCTaGGATCCTCTTTACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TMVLCVGGSCTCRQMMGSVHAFS*DPLYFL Trigger: CAGGAAGTAAAGAGGATCTCAGCTGAAGGCGTGGAC...GCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGATGGGTTTGCTTTAAGGGAGAGGGGAGAGCGTGATACACAGACCAGGCCTCAGCAGGTTCCTTaGTGGTCTCCTTCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KKDGFALRERGERDTQTRPQQVP*WSPSQS Trigger: TGATTGAGAAGGAGACCAGCAAGGAACCTGCTGAGG...CCTGGTCTGTGTATCACGCTCTCCCCTCTCCCTTAAAGCAAACCCATCCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR GCA 90 bp | AACCTGCAAATCAGCACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCCTCGCTGGTCTCTGTaGTGTCATTGGCCATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NLQISTMVLCVGGSCTCRPRWSL*CHWPSA Trigger: CGCTGATGGCCAATGACAGCACAGAGACCAGCGAGG...ACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGCTGATTTGCAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTCATCTTCATATTTGACTTTCCCTGTCACGGAGAGGAAAGACTCCCTTGAGCTCGCCGTCCTGTaGCTCCGGCATGGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSSSYLTFPVTERKDSLELAVL*LRHGLS Trigger: AGAAAGGCCATGCCGGAGCCACAGGACGGCGAGCTC...AAGGGAGTCTTTCCTCTCCGTGACAGGGAAAGTCAAATATGAAGATGAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | CGCAGGGACGTAGCACTTAAGAGGGAAAGTGACAAAGTAACTGCTTGGAGAAATATGTTCCCTCGGTCGTaGATGCGCTGCATGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRDVALKRESDKVTAWRNMFPRS*MRCMAS Trigger: AGAGGCCATGCAGCGCATCCACGACCGAGGGAACAT...ATTTCTCCAAGCAGTTACTTTGTCACTTTCCCTCTTAAGTGCTACGTCCCTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| 3UTR CAA 72 bp | TGGAGCCCTCTTAAGTCCTCAAGGACGTTTAGAAACTaGGAACACCAACCCAAGGTCATGGGAACCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: WSPLKSSRTFRN*EHQPKVMGTPR Trigger: ACGTGGGGTTCCCATGACCTTGGGTTGGTGTTCCAAGTTTCTAAACGTCCTTGAGGACTTAAGAGGGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | ACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCAGATGATGGGCAGCGGCTTGATCTTCTTCTaGTTGTACAGCCCGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TMVLCVGGSCTCRQMMGSGLIFF*LYSPMS Trigger: GCTCATCGGGCTGTACAACCAGAAGAAGATCAAGCC...GCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTCATCTTCATATTTGACTTTCCCTGTCACGGAGAGGAAAGACTCCCTTGGTTGTACAGCCCGATaGGCTTCTCTACCACCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSSSYLTFPVTERKDSLGCTAR*ASLPPL Trigger: GAGGGGTGGTAGAGAAGCTCATCGGGCTGTACAACC...AAGGGAGTCTTTCCTCTCCGTGACAGGGAAAGTCAAATATGAAGATGAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR GCA 90 bp | CGCAGGGACGTAGCACTTAAGAGGGAAAGTGACAAAGTAACTGCTTGGAGAAATGAGGGTTGTCAATGTTaGCCTGTCGCACCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRDVALKRESDKVTAWRNEGCQC*PVAPSG Trigger: ACCTGATGGTGCGACAGGGCAACATTGACAACCCTC...ATTTCTCCAAGCAGTTACTTTGTCACTTTCCCTCTTAAGTGCTACGTCCCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGATGGGTTTGCTTTAAGGGAGAGGGGAGAGCGTGATACACAGACCAGGTTTCTTCATACAGCTTaGTGGGGTTCACTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKDGFALRERGERDTQTRFLHTA*WGSLSP Trigger: TGGAGAAAGTGAACCCCATCAAGCTGTATGAAGAAA...CCTGGTCTGTGTATCACGCTCTCCCCTCTCCCTTAAAGCAAACCCATCCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR TCA 90 bp | CCCAGAAGCCTTCGAAGCTCCCTTAAGGCAAACATAAACTCTTTACACTTCCTCGAGCAGATTGAGGAGTaGGAATCCGGCGATGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSLRSSLKANINSLHFLEQIEE*ESGDDF Trigger: AAAGTCATCGCCGGATTCTCACTCCTCAATCTGCTC...GAGGAAGTGTAAAGAGTTTATGTTTGCCTTAAGGGAGCTTCGAAGGCTTCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR GCA 90 bp | CTTTTCTCATCTTCATATTTGACTTTCCCTGTCACGGAGAGGAAAGACTCCCTTTCCCTCGGTCGTGGATaGGCTGCATGGCCTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFSSSYLTFPVTERKDSLSLGRG*AAWPLL Trigger: TAAAAGAGGCCATGCAGCGCATCCACGACCGAGGGA...AAGGGAGTCTTTCCTCTCCGTGACAGGGAAAGTCAAATATGAAGATGAGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAAGTCATCATCACAAGATCAGGATCGAGATAAAGGAACACGACAAATGTCTCTGTGCTGTCATTaGCCATCAGCGGGGTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MKKSSSQDQDRDKGTRQMSLCCH*PSAGSA Trigger: CGCCGACCCCGCTGATGGCCAATGACAGCACAGAGA...CATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACTTCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGCCATGCTTAGAGGCATGGCTGATTGTTGGCAGGCAAAGAGTGTCATTCTCCACCTGCCACCATaGCTTTGCAAAACTAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSAMLRGMADCWQAKSVILHLPP*LCKTKE Trigger: TTCTTTAGTTTTGCAAAGTCATGGTGGCAGGTGGAG...AATGACACTCTTTGCCTGCCAACAATCAGCCATGCCTCTAAGCATGGCACTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR TCA 90 bp | TTAGTTTGCAAGGCTATTCTAGAACCGTCAAGAAGGACCCAAAGAAGGATGGGTGCACCATCAGGTCAATaGAGTTTAAGCCACAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVCKAILEPSRRTQRRMGAPSGQ*SLSHRL Trigger: AAGCCTGTGGCTTAAACTTCATTGACCTGATGGTGC...ACCCATCCTTCTTTGGGTCCTTCTTGACGGTTCTAGAATAGCCTTGCAAACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGATGGGTTTGCTTTAAGGGAGAGGGGAGAGCGTGATACACAGACCAGGATTGTAGTTGACAAATaGCATGACACGATCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKDGFALRERGERDTQTRIVVDK*HDTISN Trigger: ATTGGAGATCGTGTCATGGCATTTGTCAACTACAAT...CCTGGTCTGTGTATCACGCTCTCCCCTCTCCCTTAAAGCAAACCCATCCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | AACCTGCAAATCAGCACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTTTTCTGTCAAAGAGGTaGGTCACCGAATCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NLQISTMVLCVGGSCTCRFLSKR*VTESLM Trigger: CATCAAAGATTCGGTGACCCACCTCTTTGACAGAAA...ACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGCTGATTTGCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR GCA 90 bp | TTAGTTTGCAAGGCTATTCTAGAACCGTCAAGAAGGACCCAAAGAAGGATGGGTTTCACTTTCTCCACCTaGCACCATGACTTTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVCKAILEPSRRTQRRMGFTFST*HHDFAK Trigger: TTTTGCAAAGTCATGGTGGCAGGTGGAGAAAGTGAA...ACCCATCCTTCTTTGGGTCCTTCTTGACGGTTCTAGAATAGCCTTGCAAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAAGTCATCATCACAAGATCAGGATCGAGATAAAGGAACACGACAAATGGTAGACAAACTCCACTaGAGTACACACCACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MKKSSSQDQDRDKGTRQMVDKLH*STHHFS Trigger: GCTGAAGTGGTGTGTACTCCAGTGGAGTTTGTCTAC...CATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACTTCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGCCATGCTTAGAGGCATGGCTGATTGTTGGCAGGCAAAGAGTGTCATTCTCCAGTTACCATGTTaGATGAACCATATAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSAMLRGMADCWQAKSVILQLPC*MNHIKC Trigger: ACATTTTATATGGTTCATCCAACATGGTAACTGGAG...AATGACACTCTTTGCCTGCCAACAATCAGCCATGCCTCTAAGCATGGCACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAAGTCATCATCACAAGATCAGGATCGAGATAAAGGAACACGACAAATGCAGCAGGTTCCTTGCTaGTCTCCTTCTCAATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: MKKSSSQDQDRDKGTRQMQQVPC*SPSQSF Trigger: AAATGATTGAGAAGGAGACCAGCAAGGAACCTGCTG...CATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACTTCTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAAGTCATCATCACAAGATCAGGATCGAGATAAAGGAACACGACAAATGGAAACTCATGTCATCTaGGATCTTGTAGACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: MKKSSSQDQDRDKGTRQMETHVI*DLVDKL Trigger: GAGTTTGTCTACAAGATCCCAGATGACATGAGTTTC...CATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACTTCTTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS CCA 90 bp | CCGGCCAGCACCACAGCGCGCATCTCCTGGGCATCCCCGAGGCGGTaGGAGCCGTCGCCGCCCTCAGCAGGTTCCTTGCTGGTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PASTTARISWASPRR*EPSPPSAGSLLVSF Trigger: GAAGGAGACCAGCAAGGAACCTGCTGAGGGCGGCGACGGCTCCCACCGCCTCGGGGATGCCCAGGAGATGCGCGCTGTGGTGCTGGCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
||
| CDS CCA 90 bp | TTGTTGAGTCCGCCGAAGCCGGCCAGCACCACAGCGCGCATCTCCTaGGCATCCCCGAGGCGGTGGGAGCCGTCGCCGCCCTCAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSPPKPASTTARIS*ASPRRWEPSPPSAG Trigger: ACCTGCTGAGGGCGGCGACGGCTCCCACCGCCTCGGGGATGCCCAGGAGATGCGCGCTGTGGTGCTGGCCGGCTTCGGCGGACTCAACAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
||
| CDS GCA 90 bp | CATCCCCGAGGCGGTGGGAGCCGTCGCCGCCCTCAGCAGGTTCCTTaGTGGTCTCCTTCTCAATCATTTGTTCGGTCTCCTCCGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPRGGGSRRRPQQVP*WSPSQSFVRSPPLS Trigger: AGAAAGCGGAGGAGACCGAACAAATGATTGAGAAGGAGACCAGCAAGGAACCTGCTGAGGGCGGCGACGGCTCCCACCGCCTCGGGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
||
| CDS CCA 90 bp | CCCCGAGGCGGTGGGAGCCGTCGCCGCCCTCAGCAGGTTCCTTGCTaGTCTCCTTCTCAATCATTTGTTCGGTCTCCTCCGCTTTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PRGGGSRRRPQQVPC*SPSQSFVRSPPLSL Trigger: TAGAGAAAGCGGAGGAGACCGAACAAATGATTGAGAAGGAGACCAGCAAGGAACCTGCTGAGGGCGGCGACGGCTCCCACCGCCTCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
||
| CDS CCA 90 bp | GGTCCTGGACCAGGCTTTGACGCGGATCTTGAGCTCGCCGTCCTGTaGCTCCGGCATGGCCTTTCTAGAGAGCCTCAGCTTGTTGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPGPGFDADLELAVL*LRHGLSREPQLVES Trigger: GGACTCAACAAGCTGAGGCTCTCTAGAAAGGCCATGCCGGAGCCACAGGACGGCGAGCTCAAGATCCGCGTCAAAGCCTGGTCCAGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150963.2 |
||
| CDS GCA 90 bp | CAGCTTGACCCACTCCACCGCCGGCTGAGTGCACGAGCACGGACATaGCTTCGCGGAGGTTGGCAATTTCAAAGAGCATCGTGTATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QLDPLHRRLSARART*LRGGWQFQRASCMR Trigger: CCGCATACACGATGCTCTTTGAAATTGCCAACCTCCGCGAAGGCATGTCCGTGCTCGTGCACTCAGCCGGCGGTGGAGTGGGTCAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS GCA 90 bp | CCGATGAGCTTCTCTACCACCCCTCGGATGAGGCCTGAGCGGCCCTaGTTGAAGAGCAGATTGAGGAGTGAGAATCCGGCGATGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PMSFSTTPRMRPERP*LKSRLRSENPAMTL Trigger: CAAAGTCATCGCCGGATTCTCACTCCTCAATCTGCTCTTCAAGCAGGGCCGCTCAGGCCTCATCCGAGGGGTGGTAGAGAAGCTCATCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | AAACAGCCTCACTGCAGAGAGCGGAGACCCCTCTTCCTCTGTGGTAACTGGTGTGGCACCAAGGGGGTCTaGGGAGGGTTGTCAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KQPHCRERRPLFLCGNWCGTKGV*GGLSML Trigger: CAACATTGACAACCCTCCCAAGACCCCCTTGGTGCC...ACACCAGTTACCACAGAGGAAGAGGGGTCTCCGCTCTCTGCAGTGAGGCTGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS CCA 90 bp | TACGCTGTCCCCCAGAGCTTCAACAATCCCAGAACATTCGAATCCTaGCACCAAGGGGGTCTTGGGAGGGTTGTCAATGTTGCCCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: YAVPQSFNNPRTFES*HQGGLGRVVNVALS Trigger: CGACAGGGCAACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGGATTCGAATGTTCTGGGATTGTTGAAGCTCTGGGGGACAGCGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CCA 90 bp | TCCTCCAGGGCCCATAAGGAATCCACCACTGGCTTGATCTTCTTCTaGTTGTACAGCCCGATGAGCTTCTCTACCACCCCTCGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRAHKESTTGLIFF*LYSPMSFSTTPRMR Trigger: CCTCATCCGAGGGGTGGTAGAGAAGCTCATCGGGCTGTACAACCAGAAGAAGATCAAGCCAGTGGTGGATTCCTTATGGGCCCTGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CAA 90 bp | CCCAGAAGCCTTCGAAGCTCCCTTAAGGCAAACATAAACTCTTTACACTTCCTCCAGCTGAGCCACAGCTaGACCCACTCCACCGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRSLRSSLKANINSLHFLQLSHS*THSTAG Trigger: GCCGGCGGTGGAGTGGGTCAAGCTGTGGCTCAGCTG...GAGGAAGTGTAAAGAGTTTATGTTTGCCTTAAGGGAGCTTCGAAGGCTTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | TGCAGACAAACACGACACACACTGGACTACAGCATTGGTTCACTGGGGCACAGAAGGAGACTGAGCCCCTaGCCAGTGTTGTCCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: CRQTRHTLDYSIGSLGHRRRLSP*PVLSPH Trigger: GTGTGGGGACAACACTGGCAAGGGGCTCAGTCTCCT...TCTGTGCCCCAGTGAACCAATGCTGTAGTCCAGTGTGTGTCGTGTTTGTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CAA 90 bp | TGCAGACAAACACGACACACACTGGACTACAGCATTGGTTCACTGGGGCACAGAGGAGGGTTGTCAATGTaGCCCTGTCGCACCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRQTRHTLDYSIGSLGHRGGLSM*PCRTIR Trigger: CCTGATGGTGCGACAGGGCAACATTGACAACCCTCC...TCTGTGCCCCAGTGAACCAATGCTGTAGTCCAGTGTGTGTCGTGTTTGTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CCA 90 bp | GTCTTTTCCACATCCAGAATTAACTTCCCGATGTTCCCTCGGTCGTaGATGCGCTGCATGGCCTCTTTTACCTCCTCCAGGGCCCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFSTSRINFPMFPRS*MRCMASFTSSRAHK Trigger: CTTATGGGCCCTGGAGGAGGTAAAAGAGGCCATGCAGCGCATCCACGACCGAGGGAACATCGGGAAGTTAATTCTGGATGTGGAAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS GCA 90 bp | TTTCCACATCCAGAATTAACTTCCCGATGTTCCCTCGGTCGTGGATaGGCTGCATGGCCTCTTTTACCTCCTCCAGGGCCCATAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FPHPELTSRCSLGRG*AAWPLLPPPGPIRN Trigger: ATTCCTTATGGGCCCTGGAGGAGGTAAAAGAGGCCATGCAGCGCATCCACGACCGAGGGAACATCGGGAAGTTAATTCTGGATGTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS GCA 90 bp | GGACATGCCTTCGCGGAGGTTGGCAATTTCAAAGAGCATCGTGTATaGGGTGACGAAATTCATGGGGAAAGCAGCAGCCTCAGAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GHAFAEVGNFKEHRV*GDEIHGESSSLRET Trigger: AGTTTCTCTGAGGCTGCTGCTTTCCCCATGAATTTCGTCACCGCATACACGATGCTCTTTGAAATTGCCAACCTCCGCGAAGGCATGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTGTTACTTCCAAAGCCGATTAGAGAGGACAAGAATTGTTTCCTTTCAAGCGCTTTGACGCGGATCTaGAGCTCGCCGTCCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLLPKPIREDKNCFLSSALTRI*SSPSCG Trigger: GCCACAGGACGGCGAGCTCAAGATCCGCGTCAAAGC...GCTTGAAAGGAAACAATTCTTGTCCTCTCTAATCGGCTTTGGAAGTAACACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CAA 90 bp | ACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTCAGATGATGGGCAGCTGCTTGAAGAGCAGATaGAGGAGTGAGAATCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TMVLCVGGSCTCRQMMGSCLKSR*RSENPA Trigger: CGCCGGATTCTCACTCCTCAATCTGCTCTTCAAGCA...GCTGCCCATCATCTGACGACAAGTGCATGATCCTCCAACACACAAAACCATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CAA 90 bp | CTTTTCTCATCTTCATATTTGACTTTCCCTGTCACGGAGAGGAAAGACTCCCTTGTCTCTGTGCTGTCATaGGCCATCAGCGGGGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFSSSYLTFPVTERKDSLVSVLS*AISGVG Trigger: GCCGACCCCGCTGATGGCCAATGACAGCACAGAGAC...AAGGGAGTCTTTCCTCTCCGTGACAGGGAAAGTCAAATATGAAGATGAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS TCA 90 bp | TGCCTTCGCGGAGGTTGGCAATTTCAAAGAGCATCGTGTATGCGGTaGCGAAATTCATGGGGAAAGCAGCAGCCTCAGAGAAACTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: CLRGGWQFQRASCMR*RNSWGKQQPQRNSC Trigger: ACATGAGTTTCTCTGAGGCTGCTGCTTTCCCCATGAATTTCGTCACCGCATACACGATGCTCTTTGAAATTGCCAACCTCCGCGAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS GCA 90 bp | CACTGGAGTACACACCACTTCAGCCCAGGCATTGTAGTTGACAAATaGCATGACACGATCTCCAATCTCGTATCCTTTTACGCTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HWSTHHFSPGIVVDK*HDTISNLVSFYAVP Trigger: GGGGACAGCGTAAAAGGATACGAGATTGGAGATCGTGTCATGGCATTTGTCAACTACAATGCCTGGGCTGAAGTGGTGTGTACTCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | AAGAAGGATGGGTTTGCTTTAAGGGAGAGGGGAGAGCGTGATACACAGACCAGGTTGATGGCTTCATGCTaGAAAGTAGAGGCTGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KKDGFALRERGERDTQTRLMASC*KVEAVP Trigger: TGGAACAGCCTCTACTTTCAAGCATGAAGCCATCAA...CCTGGTCTGTGTATCACGCTCTCCCCTCTCCCTTAAAGCAAACCCATCCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CCA 90 bp | GAAATTCATGGGGAAAGCAGCAGCCTCAGAGAAACTCATGTCATCTaGGATCTTGTAGACAAACTCCACTGGAGTACACACCACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EIHGESSSLRETHVI*DLVDKLHWSTHHFS Trigger: GCTGAAGTGGTGTGTACTCCAGTGGAGTTTGTCTACAAGATCCCAGATGACATGAGTTTCTCTGAGGCTGCTGCTTTCCCCATGAATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | GTAAGTGCCATGCTTAGAGGCATGGCTGATTGTTGGCAGGCAAAGAGTGTCATTCTCCTTCTCAATCATTaGTTCGGTCTCCTCCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSAMLRGMADCWQAKSVILLLNH*FGLLRF Trigger: AAAGCGGAGGAGACCGAACAAATGATTGAGAAGGAG...AATGACACTCTTTGCCTGCCAACAATCAGCCATGCCTCTAAGCATGGCACTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | ATGAAGAAGTCATCATCACAAGATCAGGATCGAGATAAAGGAACACGACAAATGGGGGTCTTGGGAGGGTaGTCAATGTTGCCCTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: MKKSSSQDQDRDKGTRQMGVLGG*SMLPCR Trigger: GCGACAGGGCAACATTGACAACCCTCCCAAGACCCC...CATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACTTCTTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAAGTCATCATCACAAGATCAGGATCGAGATAAAGGAACACGACAAATGAGCCCCTTGCCAGTGTaGTCCCCACACAGGCAATCC | + |
|
Preference number: 5 (lower is better) Translates to: MKKSSSQDQDRDKGTRQMSPLPV*SPHRQS Trigger: GGATTGCCTGTGTGGGGACAACACTGGCAAGGGGCT...CATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACTTCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | CCTACTCTCCTGTCACTAGCCAAACTGGTAAGTGCCATGCTTAGAGGCATGGCTAATCCGGCGATGACTTaGTTTTCTTCATACAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTLLSLAKLVSAMLRGMANPAMT*FSSYSL Trigger: CAAGCTGTATGAAGAAAACAAAGTCATCGCCGGATT...AGCCATGCCTCTAAGCATGGCACTTACCAGTTTGGCTAGTGACAGGAGAGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CCA 90 bp | CTCAGAGAAACTCATGTCATCTGGGATCTTGTAGACAAACTCCACTaGAGTACACACCACTTCAGCCCAGGCATTGTAGTTGACAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LRETHVIWDLVDKLH*STHHFSPGIVVDKC Trigger: GCATTTGTCAACTACAATGCCTGGGCTGAAGTGGTGTGTACTCCAGTGGAGTTTGTCTACAAGATCCCAGATGACATGAGTTTCTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS-3UTR CAA 90 bp | CTTTTCTCATCTTCATATTTGACTTTCCCTGTCACGGAGAGGAAAGACTCCCTTTTTAAGCCACAGGCTTaGACGCGGATCTTGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LFSSSYLTFPVTERKDSLFKPQA*TRILSS Trigger: CGAGCTCAAGATCCGCGTCAAAGCCTGTGGCTTAAA...AAGGGAGTCTTTCCTCTCCGTGACAGGGAAAGTCAAATATGAAGATGAGAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | AAGAAGGATGGGTTTGCTTTAAGGGAGAGGGGAGAGCGTGATACACAGACCAGGTCTCCAGTTACCATGTaGGATGAACCATATAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: KKDGFALRERGERDTQTRSPVTM*DEPYKM Trigger: CATTTTATATGGTTCATCCAACATGGTAACTGGAGA...CCTGGTCTGTGTATCACGCTCTCCCCTCTCCCTTAAAGCAAACCCATCCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | CTGGTGTTACTTCCAAAGCCGATTAGAGAGGACAAGAATTGTTTCCTTTCAAGCTTGATCTTCTTCTGGTaGTACAGCCCGATGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLLPKPIREDKNCFLSSLIFFW*YSPMSF Trigger: GAAGCTCATCGGGCTGTACAACCAGAAGAAGATCAA...GCTTGAAAGGAAACAATTCTTGTCCTCTCTAATCGGCTTTGGAAGTAACACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | ATGAAGAAGTCATCATCACAAGATCAGGATCGAGATAAAGGAACACGACAAATGAAGGGCATCCTCTCTTaGTTCTCGCTGTCCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MKKSSSQDQDRDKGTRQMKGILS*FSLSPS Trigger: TGAAGGGGACAGCGAGAACAAAGAGAGGATGCCCTT...CATTTGTCGTGTTCCTTTATCTCGATCCTGATCTTGTGATGATGACTTCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS-3UTR CAA 90 bp | AACCTGCAAATCAGCACCATGGTTTTGTGTGTTGGAGGATCATGCACTTGTCGTAAACTAAAGAAACTCTaGGTCTCTCCAGTTACCATG | + |
|
Preference number: 5 (lower is better) Translates to: NLQISTMVLCVGGSCTCRKLKKL*VSPVTM Trigger: CATGGTAACTGGAGAGACCAAGAGTTTCTTTAGTTT...ACGACAAGTGCATGATCCTCCAACACACAAAACCATGGTGCTGATTTGCAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CCA 72 bp | CCGCCGAAGCCGGCCAGCACCACAGCGCGCATCTCCTaGGCATCCCCGAGGCGGTGGGAGCCGTCGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPKPASTTARIS*ASPRRWEPSPP Trigger: GGGCGGCGACGGCTCCCACCGCCTCGGGGATGCCCAGGAGATGCGCGCTGTGGTGCTGGCCGGCTTCGGCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CCA 72 bp | ACCACAGCGCGCATCTCCTGGGCATCCCCGAGGCGGTaGGAGCCGTCGCCGCCCTCAGCAGGTTCCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TTARISWASPRR*EPSPPSAGSLL Trigger: CAGCAAGGAACCTGCTGAGGGCGGCGACGGCTCCCACCGCCTCGGGGATGCCCAGGAGATGCGCGCTGTGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 72 bp | GGCTCCGGCATGGCCTTTCTAGAGAGCCTCAGCTTGTaGAGTCCGCCGAAGCCGGCCAGCACCACAGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GSGMAFLESLSL*SPPKPASTTAR Trigger: GCGCGCTGTGGTGCTGGCCGGCTTCGGCGGACTCAACAAGCTGAGGCTCTCTAGAAAGGCCATGCCGGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 90 bp | CCGTCCTGTGGCTCCGGCATGGCCTTTCTAGAGAGCCTCAGCTTGTaGAGTCCGCCGAAGCCGGCCAGCACCACAGCGCGCATCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSCGSGMAFLESLSL*SPPKPASTTARISW Trigger: CCAGGAGATGCGCGCTGTGGTGCTGGCCGGCTTCGGCGGACTCAACAAGCTGAGGCTCTCTAGAAAGGCCATGCCGGAGCCACAGGACGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 90 bp | TCGCCGTCCTGTGGCTCCGGCATGGCCTTTCTAGAGAGCCTCAGCTaGTTGAGTCCGCCGAAGCCGGCCAGCACCACAGCGCGCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSCGSGMAFLESLS*LSPPKPASTTARIS Trigger: GGAGATGCGCGCTGTGGTGCTGGCCGGCTTCGGCGGACTCAACAAGCTGAGGCTCTCTAGAAAGGCCATGCCGGAGCCACAGGACGGCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 72 bp | TGTGGCTCCGGCATGGCCTTTCTAGAGAGCCTCAGCTaGTTGAGTCCGCCGAAGCCGGCCAGCACCACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CGSGMAFLESLS*LSPPKPASTTA Trigger: CGCTGTGGTGCTGGCCGGCTTCGGCGGACTCAACAAGCTGAGGCTCTCTAGAAAGGCCATGCCGGAGCCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 90 bp | GCATCCCCGAGGCGGTGGGAGCCGTCGCCGCCCTCAGCAGGTTCCTaGCTGGTCTCCTTCTCAATCATTTGTTCGGTCTCCTCCGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASPRRWEPSPPSAGS*LVSFSIICSVSSAF Trigger: GAAAGCGGAGGAGACCGAACAAATGATTGAGAAGGAGACCAGCAAGGAACCTGCTGAGGGCGGCGACGGCTCCCACCGCCTCGGGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 72 bp | GTCCAAAGGGTCCTGGACCAGGCTTTGACGCGGATCTaGAGCTCGCCGTCCTGTGGCTCCGGCATGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VQRVLDQALTRI*SSPSCGSGMAF Trigger: AAAGGCCATGCCGGAGCCACAGGACGGCGAGCTCAAGATCCGCGTCAAAGCCTGGTCCAGGACCCTTTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150963.2 |
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| CDS GCA 72 bp | GGCGGTGGGAGCCGTCGCCGCCCTCAGCAGGTTCCTTaGTGGTCTCCTTCTCAATCATTTGTTCGGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GGGSRRRPQQVP*WSPSQSFVRSP Trigger: AGGAGACCGAACAAATGATTGAGAAGGAGACCAGCAAGGAACCTGCTGAGGGCGGCGACGGCTCCCACCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS GCA 72 bp | CCACTCCACCGCCGGCTGAGTGCACGAGCACGGACATaGCTTCGCGGAGGTTGGCAATTTCAAAGAGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: PLHRRLSARART*LRGGWQFQRAS Trigger: CGATGCTCTTTGAAATTGCCAACCTCCGCGAAGGCATGTCCGTGCTCGTGCACTCAGCCGGCGGTGGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS GCA 72 bp | GGTCCTCTTCTTCCTCCCCTGCCTCGCTGGTCTCTGTaGTGTCATTGGCCATCAGCGGGGTCGGCGTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GPLLPPLPRWSL*CHWPSAGSASF Trigger: AAAAGACGCCGACCCCGCTGATGGCCAATGACAGCACAGAGACCAGCGAGGCAGGGGAGGAAGAAGAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS CCA 72 bp | GGTGGGAGCCGTCGCCGCCCTCAGCAGGTTCCTTGCTaGTCTCCTTCTCAATCATTTGTTCGGTCTCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GGSRRRPQQVPC*SPSQSFVRSPP Trigger: CGGAGGAGACCGAACAAATGATTGAGAAGGAGACCAGCAAGGAACCTGCTGAGGGCGGCGACGGCTCCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CCA 72 bp | CCAGGCTTTGACGCGGATCTTGAGCTCGCCGTCCTGTaGCTCCGGCATGGCCTTTCTAGAGAGCCTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGFDADLELAVL*LRHGLSREPQL Trigger: AAGCTGAGGCTCTCTAGAAAGGCCATGCCGGAGCCACAGGACGGCGAGCTCAAGATCCGCGTCAAAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150963.2 |
||
| CDS CAA 72 bp | AGGCGGTGGGAGCCGTCGCCGCCCTCAGCAGGTTCCTaGCTGGTCTCCTTCTCAATCATTTGTTCGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRWEPSPPSAGS*LVSFSIICSVS Trigger: GGAGACCGAACAAATGATTGAGAAGGAGACCAGCAAGGAACCTGCTGAGGGCGGCGACGGCTCCCACCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
||
| CDS GCA 72 bp | TTCTCTACCACCCCTCGGATGAGGCCTGAGCGGCCCTaGTTGAAGAGCAGATTGAGGAGTGAGAATCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FSTTPRMRPERP*LKSRLRSENPA Trigger: CGCCGGATTCTCACTCCTCAATCTGCTCTTCAAGCAGGGCCGCTCAGGCCTCATCCGAGGGGTGGTAGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS CCA 72 bp | ACAGGCTTTGACGCGGATCTTGAGCTCGCCGTCCTGTaGCTCCGGCATGGCCTTTCTAGAGAGCCTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TGFDADLELAVL*LRHGLSREPQL Trigger: AAGCTGAGGCTCTCTAGAAAGGCCATGCCGGAGCCACAGGACGGCGAGCTCAAGATCCGCGTCAAAGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS CAA 72 bp | TCTACCACCCCTCGGATGAGGCCTGAGCGGCCCTGCTaGAAGAGCAGATTGAGGAGTGAGAATCCGGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: STTPRMRPERPC*KSRLRSENPAM Trigger: CATCGCCGGATTCTCACTCCTCAATCTGCTCTTCAAGCAGGGCCGCTCAGGCCTCATCCGAGGGGTGGTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS CAA 90 bp | AGATCCATTGTCCAAAGGGTCCTGGACCAGGCTTTGACGCGGATCTaGAGCTCGCCGTCCTGTGGCTCCGGCATGGCCTTTCTAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSIVQRVLDQALTRI*SSPSCGSGMAFLES Trigger: GCTCTCTAGAAAGGCCATGCCGGAGCCACAGGACGGCGAGCTCAAGATCCGCGTCAAAGCCTGGTCCAGGACCCTTTGGACAATGGATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150963.2 |
||
| CDS CAA 90 bp | ACTTCTGTGAAAAGATCCATTGTCCAAAGGGTCCTGGACCAGGCTTaGACGCGGATCTTGAGCTCGCCGTCCTGTGGCTCCGGCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSVKRSIVQRVLDQA*TRILSSPSCGSGMA Trigger: GGCCATGCCGGAGCCACAGGACGGCGAGCTCAAGATCCGCGTCAAAGCCTGGTCCAGGACCCTTTGGACAATGGATCTTTTCACAGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150963.2 |
||
| CDS GCA 72 bp | CCAGAATTAACTTCCCGATGTTCCCTCGGTCGTGGATaGGCTGCATGGCCTCTTTTACCTCCTCCAGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PELTSRCSLGRG*AAWPLLPPPGP Trigger: GGGCCCTGGAGGAGGTAAAAGAGGCCATGCAGCGCATCCACGACCGAGGGAACATCGGGAAGTTAATTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
||
| CDS CAA 90 bp | CCACCGCCGGCTGAGTGCACGAGCACGGACATGCCTTCGCGGAGGTaGGCAATTTCAAAGAGCATCGTGTATGCGGTGACGAAATTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PPPAECTSTDMPSRR*AISKSIVYAVTKFM Trigger: CATGAATTTCGTCACCGCATACACGATGCTCTTTGAAATTGCCAACCTCCGCGAAGGCATGTCCGTGCTCGTGCACTCAGCCGGCGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 72 bp | GCTGAGTGCACGAGCACGGACATGCCTTCGCGGAGGTaGGCAATTTCAAAGAGCATCGTGTATGCGGTGACG | + |
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Preference number: 6 (lower is better) Translates to: AECTSTDMPSRR*AISKSIVYAVT Trigger: CGTCACCGCATACACGATGCTCTTTGAAATTGCCAACCTCCGCGAAGGCATGTCCGTGCTCGTGCACTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 72 bp | AAAAGATCCATTGTCCAAAGGGTCCTGGACCAGGCTTaGACGCGGATCTTGAGCTCGCCGTCCTGTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KRSIVQRVLDQA*TRILSSPSCGS Trigger: GGAGCCACAGGACGGCGAGCTCAAGATCCGCGTCAAAGCCTGGTCCAGGACCCTTTGGACAATGGATCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150963.2 |
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| CDS CAA 90 bp | TCCAGGGCCCATAAGGAATCCACCACTGGCTTGATCTTCTTCTGGTaGTACAGCCCGATGAGCTTCTCTACCACCCCTCGGATGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SRAHKESTTGLIFFW*YSPMSFSTTPRMRP Trigger: AGGCCTCATCCGAGGGGTGGTAGAGAAGCTCATCGGGCTGTACAACCAGAAGAAGATCAAGCCAGTGGTGGATTCCTTATGGGCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CCA 72 bp | TCCCAGAACATTCGAATCCTGGCACCAAGGGGGTCTTaGGAGGGTTGTCAATGTTGCCCTGTCGCACCATCA | + |
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Preference number: 6 (lower is better) Translates to: SQNIRILAPRGS*EGCQCCPVAPS Trigger: TGATGGTGCGACAGGGCAACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGGATTCGAATGTTCTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 72 bp | TCAATGAAGTTTAAGCCACAGGCTTTGACGCGGATCTaGAGCTCGCCGTCCTGTGGCTCCGGCATGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SMKFKPQALTRI*SSPSCGSGMAF Trigger: AAAGGCCATGCCGGAGCCACAGGACGGCGAGCTCAAGATCCGCGTCAAAGCCTGTGGCTTAAACTTCATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 72 bp | CATTCGAATCCTGGCACCAAGGGGGTCTTGGGAGGGTaGTCAATGTTGCCCTGTCGCACCATCAGGTCAATG | + |
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Preference number: 6 (lower is better) Translates to: HSNPGTKGVLGG*SMLPCRTIRSM Trigger: CATTGACCTGATGGTGCGACAGGGCAACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGGATTCGAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 72 bp | ATCCCAGAACATTCGAATCCTGGCACCAAGGGGGTCTaGGGAGGGTTGTCAATGTTGCCCTGTCGCACCATC | + |
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Preference number: 6 (lower is better) Translates to: IPEHSNPGTKGV*GGLSMLPCRTI Trigger: GATGGTGCGACAGGGCAACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGGATTCGAATGTTCTGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 90 bp | ATGAGCTTCTCTACCACCCCTCGGATGAGGCCTGAGCGGCCCTGCTaGAAGAGCAGATTGAGGAGTGAGAATCCGGCGATGACTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: MSFSTTPRMRPERPC*KSRLRSENPAMTLF Trigger: AAACAAAGTCATCGCCGGATTCTCACTCCTCAATCTGCTCTTCAAGCAGGGCCGCTCAGGCCTCATCCGAGGGGTGGTAGAGAAGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CCA 72 bp | ACATCCAGAATTAACTTCCCGATGTTCCCTCGGTCGTaGATGCGCTGCATGGCCTCTTTTACCTCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TSRINFPMFPRS*MRCMASFTSSR Trigger: CCTGGAGGAGGTAAAAGAGGCCATGCAGCGCATCCACGACCGAGGGAACATCGGGAAGTTAATTCTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 72 bp | CCTGGCACCAAGGGGGTCTTGGGAGGGTTGTCAATGTaGCCCTGTCGCACCATCAGGTCAATGAAGTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: PGTKGVLGGLSM*PCRTIRSMKFK Trigger: CTTAAACTTCATTGACCTGATGGTGCGACAGGGCAACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 90 bp | CATTCGAATCCTGGCACCAAGGGGGTCTTGGGAGGGTTGTCAATGTaGCCCTGTCGCACCATCAGGTCAATGAAGTTTAAGCCACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: HSNPGTKGVLGGLSM*PCRTIRSMKFKPQA Trigger: AGCCTGTGGCTTAAACTTCATTGACCTGATGGTGCGACAGGGCAACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGGATTCGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 90 bp | GCTTCAACAATCCCAGAACATTCGAATCCTGGCACCAAGGGGGTCTaGGGAGGGTTGTCAATGTTGCCCTGTCGCACCATCAGGTCAATG | + |
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Preference number: 6 (lower is better) Translates to: ASTIPEHSNPGTKGV*GGLSMLPCRTIRSM Trigger: CATTGACCTGATGGTGCGACAGGGCAACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGGATTCGAATGTTCTGGGATTGTTGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CAA 90 bp | GCCTCTTTTACCTCCTCCAGGGCCCATAAGGAATCCACCACTGGCTaGATCTTCTTCTGGTTGTACAGCCCGATGAGCTTCTCTACCACC | + |
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Preference number: 6 (lower is better) Translates to: ASFTSSRAHKESTTG*IFFWLYSPMSFSTT Trigger: GGTGGTAGAGAAGCTCATCGGGCTGTACAACCAGAAGAAGATCAAGCCAGTGGTGGATTCCTTATGGGCCCTGGAGGAGGTAAAAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CCA 72 bp | CCCCAGAGCTTCAACAATCCCAGAACATTCGAATCCTaGCACCAAGGGGGTCTTGGGAGGGTTGTCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: PQSFNNPRTFES*HQGGLGRVVNV Trigger: AACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGGATTCGAATGTTCTGGGATTGTTGAAGCTCTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS CCA 72 bp | GCCCATAAGGAATCCACCACTGGCTTGATCTTCTTCTaGTTGTACAGCCCGATGAGCTTCTCTACCACCCCT | + |
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Preference number: 6 (lower is better) Translates to: AHKESTTGLIFF*LYSPMSFSTTP Trigger: AGGGGTGGTAGAGAAGCTCATCGGGCTGTACAACCAGAAGAAGATCAAGCCAGTGGTGGATTCCTTATGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 72 bp | CATAAGGAATCCACCACTGGCTTGATCTTCTTCTGGTaGTACAGCCCGATGAGCTTCTCTACCACCCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: HKESTTGLIFFW*YSPMSFSTTPR Trigger: CCGAGGGGTGGTAGAGAAGCTCATCGGGCTGTACAACCAGAAGAAGATCAAGCCAGTGGTGGATTCCTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 90 bp | CATTCGAATCCTGGCACCAAGGGGGTCTTGGGAGGGTTGTCAATGTaGCCCTGTCGCACCATCAGGTCAATGAAGTTTAAGCCACTCACT | + |
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Preference number: 6 (lower is better) Translates to: HSNPGTKGVLGGLSM*PCRTIRSMKFKPLT Trigger: AGTGAGTGGCTTAAACTTCATTGACCTGATGGTGCGACAGGGCAACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGGATTCGAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150963.2 |
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| CDS CAA 90 bp | ATCCCAGAACATTCGAATCCTGGCACCAAGGGGGTCTTGGGAGGGTaGTCAATGTTGCCCTGTCGCACCATCAGGTCAATGAAGTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: IPEHSNPGTKGVLGG*SMLPCRTIRSMKFK Trigger: CTTAAACTTCATTGACCTGATGGTGCGACAGGGCAACATTGACAACCCTCCCAAGACCCCCTTGGTGCCAGGATTCGAATGTTCTGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS GCA 72 bp | TTCGCGGAGGTTGGCAATTTCAAAGAGCATCGTGTATaGGGTGACGAAATTCATGGGGAAAGCAGCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FAEVGNFKEHRV*GDEIHGESSSL Trigger: GAGGCTGCTGCTTTCCCCATGAATTTCGTCACCGCATACACGATGCTCTTTGAAATTGCCAACCTCCGCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 72 bp | CTCAGCAGGTTCCTTGCTGGTCTCCTTCTCAATCATTaGTTCGGTCTCCTCCGCTTTCTCTACGCCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSRFLAGLLLNH*FGLLRFLYAFL Trigger: AAGGAAGGCGTAGAGAAAGCGGAGGAGACCGAACAAATGATTGAGAAGGAGACCAGCAAGGAACCTGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049509.7 ENSMUST00000150963.2 |
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| CDS TCA 72 bp | GGAGGTTGGCAATTTCAAAGAGCATCGTGTATGCGGTaGCGAAATTCATGGGGAAAGCAGCAGCCTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GGWQFQRASCMR*RNSWGKQQPQR Trigger: TCTCTGAGGCTGCTGCTTTCCCCATGAATTTCGTCACCGCATACACGATGCTCTTTGAAATTGCCAACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 90 bp | CCCTGCTTGAAGAGCAGATTGAGGAGTGAGAATCCGGCGATGACTTaGTTTTCTTCATACAGCTTGATGGGGTTCACTTTCTCCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: PCLKSRLRSENPAMT*FSSYSLMGFTFSTC Trigger: GCAGGTGGAGAAAGTGAACCCCATCAAGCTGTATGAAGAAAACAAAGTCATCGCCGGATTCTCACTCCTCAATCTGCTCTTCAAGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 90 bp | TTTCTGTCAAAGAGGTGGGTCACCGAATCTTTGATGGCTTCATGCTaGAAAGTAGAGGCTGTTCCAAAGACGGTCACATTGGGGACGGTA | + |
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Preference number: 6 (lower is better) Translates to: FLSKRWVTESLMASC*KVEAVPKTVTLGTV Trigger: TACCGTCCCCAATGTGACCGTCTTTGGAACAGCCTCTACTTTCAAGCATGAAGCCATCAAAGATTCGGTGACCCACCTCTTTGACAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CCA 72 bp | ACTCATGTCATCTGGGATCTTGTAGACAAACTCCACTaGAGTACACACCACTTCAGCCCAGGCATTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: THVIWDLVDKLH*STHHFSPGIVV Trigger: AACTACAATGCCTGGGCTGAAGTGGTGTGTACTCCAGTGGAGTTTGTCTACAAGATCCCAGATGACATGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 90 bp | TTGAGGAGTGAGAATCCGGCGATGACTTTGTTTTCTTCATACAGCTaGATGGGGTTCACTTTCTCCACCTGCCACCATGACTTTGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: LRSENPAMTLFSSYS*MGFTFSTCHHDFAK Trigger: TTTTGCAAAGTCATGGTGGCAGGTGGAGAAAGTGAACCCCATCAAGCTGTATGAAGAAAACAAAGTCATCGCCGGATTCTCACTCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS GCA 72 bp | ACACACCACTTCAGCCCAGGCATTGTAGTTGACAAATaGCATGACACGATCTCCAATCTCGTATCCTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: THHFSPGIVVDK*HDTISNLVSFY Trigger: GTAAAAGGATACGAGATTGGAGATCGTGTCATGGCATTTGTCAACTACAATGCCTGGGCTGAAGTGGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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| CDS CAA 72 bp | AAGAGCAGATTGAGGAGTGAGAATCCGGCGATGACTTaGTTTTCTTCATACAGCTTGATGGGGTTCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: KSRLRSENPAMT*FSSYSLMGFTF Trigger: GAAAGTGAACCCCATCAAGCTGTATGAAGAAAACAAAGTCATCGCCGGATTCTCACTCCTCAATCTGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049509.7 |
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