Pregenerated sensors for VARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038838Ensembl transcript IDs: ENSMUST00000043674.15, ENSMUST00000164404.8, ENSMUST00000165144.2, ENSMUST00000168922.8, ENSMUST00000169093.2
Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTCTGGGGGTCCACCAGGCCCTGCAGCTCCATGTAGATCTTCATaGTGTCACCCAGTGGGGTCAGGGCCCACCCTGAGGGAGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: GSGGPPGPAAPCRSS*CHPVGSGPTLRELL Trigger: CAGCAGCTCCCTCAGGGTGGGCCCTGACCCCACTGGGTGACACCATGAAGATCTACATGGAGCTGCAGGGCCTGGTGGACCCCCAGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR CCA 90 bp | TGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTaGCTGGCGCCAGAACTCCAGGCTGCGGGTGCTGGGGTAGGGGGC | + |
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Preference number: 1 (lower is better) Translates to: CLYNLLDSGEAALQL*LAPELQAAGAGVGG Trigger: GCCCCCTACCCCAGCACCCGCAGCCTGGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR TCA 90 bp | CTCCTGGGTCCGAGCACTGCAGCAGCACTTGGGGTCGGGCTTTTGTaGGCTGGTAGGTGGCTCGGAGCGCCCGCAATGCCTGTACAACCT | + |
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Preference number: 1 (lower is better) Translates to: LLGPSTAAALGVGLL*AGRWLGAPAMPVQP Trigger: AGGTTGTACAGGCATTGCGGGCGCTCCGAGCCACCTACCAGCTCACAAAAGCCCGACCCCAAGTGCTGCTGCAGTGCTCGGACCCAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR CCA 90 bp | ACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCTaGACTAGGCCTTGTTCTCCTGGGTCCGAGCACTGCAGCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: TAPQWLRMPRGSRKG*TRPCSPGSEHCSST Trigger: AGTGCTGCTGCAGTGCTCGGACCCAGGAGAACAAGGCCTAGTCCAGCCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR CCA 90 bp | GCTCCAGCTCTGGCTGGCGCCAGAACTCTTGGGAGGCAGAGTAGGTaGGATGGGTCCAGGACAGCCAGGGTTACACAGCAAAGTGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: APALAGARTLGRQSR*DGSRTARVTQQSGD Trigger: ATCCCCACTTTGCTGTGTAACCCTGGCTGTCCTGGACCCATCCCACCTACTCTGCCTCCCAAGAGTTCTGGCGCCAGCCAGAGCTGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
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| 3UTR CCA 90 bp | TGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTaGCTGGCGCCAGAACTCTTGGGAGGCAGAGTAGGTGGGATGGGT | + |
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Preference number: 1 (lower is better) Translates to: CLYNLLDSGEAALQL*LAPELLGGRVGGMG Trigger: ACCCATCCCACCTACTCTGCCTCCCAAGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
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| 3UTR CCA 90 bp | ATTCGCTGGCTGCAAAGGCCAGGCGGCTTAGAATCCAGGCATCCATaGGAGAGGAGGGGGTTACACCTCCTCTGCTGGTTGGGGCACGAA | + |
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Preference number: 1 (lower is better) Translates to: IRWLQRPGGLESRHP*ERRGLHLLCWLGHE Trigger: TTCGTGCCCCAACCAGCAGAGGAGGTGTAACCCCCTCCTCTCCCATGGATGCCTGGATTCTAAGCCGCCTGGCCTTTGCAGCCAGCGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR GCA 90 bp | CGTCCCACACTCAGGGATCCCGTAAGGAAAGTCCTTTTTCTGTGCTaGGGCTGCAACGGCGAGCTCTCCAGGGTCCAAGTTACCGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: RPTLRDPVRKVLFLC*GCNGELSRVQVTVS Trigger: AGAGACGGTAACTTGGACCCTGGAGAGCTCGCCGTTGCAGCCGCAGCACAGAAAAAGGACTTTCCTTACGGGATCCCTGAGTGTGGGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR GCA 90 bp | ATCCGTCCCACACTCAGGGATCCCGTAAGGAAAGTCCTTTTTCTGTaGTGCGGCTGCAACGGCGAGCTCTCCAGGGTCCAAGTTACCGTC | + |
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Preference number: 1 (lower is better) Translates to: IRPTLRDPVRKVLFL*CGCNGELSRVQVTV Trigger: GACGGTAACTTGGACCCTGGAGAGCTCGCCGTTGCAGCCGCAGCACAGAAAAAGGACTTTCCTTACGGGATCCCTGAGTGTGGGACGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR GCA 90 bp | GCCTGGTCCAGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTaGTGCCTCTCTGCAAGACCCTCTGACATGGTCCGGTTCAACAGG | + |
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Preference number: 1 (lower is better) Translates to: AWSSFDNSRWREEIL*CLSARPSDMVRFNR Trigger: CCTGTTGAACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCTGGACCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR GCA 90 bp | ACACTCAGGGATCCCGTAAGGAAAGTCCTTTTTCTGTGCTGCGGCTaGAACGGCGAGCTCTCCAGGGTCCAAGTTACCGTCTCTCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: TLRDPVRKVLFLCCG*NGELSRVQVTVSQL Trigger: AAGCTGAGAGACGGTAACTTGGACCCTGGAGAGCTCGCCGTTGCAGCCGCAGCACAGAAAAAGGACTTTCCTTACGGGATCCCTGAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR GCA 90 bp | TGGTCCAGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTGCTaGCTCTCTGCAAGACCCTCTGACATGGTCCGGTTCAACAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: WSSFDNSRWREEILC*LSARPSDMVRFNRS Trigger: TGACCTGTTGAACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCTGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR CCA 90 bp | CAGTCGAGCGGGGCACAGGGCAGTAAAGGCTCACACTTGCGTGCTTaGGGTTTATCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCG | + |
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Preference number: 1 (lower is better) Translates to: QSSGAQGSKGSHLRA*GLSFYLHLLLILES Trigger: CGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGATAAACCCCAAGCACGCAAGTGTGAGCCTTTACTGCCCTGTGCCCCGCTCGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| 3UTR CCA 90 bp | TGGGGTTTATCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTaGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: WGLSFYLHLLLILES*HFPTCSLLQNEEGG Trigger: ACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGATAAACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| 3UTR-3UTR TCA 90 bp | CTTCCGGCCCTGCCTGTCCCGAACCATGGAGTGAAGAAGCACCTTGCTGAAGGGGCTGGGTCCCCAGCATaGCCATGCGGCCCACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LPALPVPNHGVKKHLAEGAGSPA*PCGPPR Trigger: TCTGGGTGGGCCGCATGGTCATGCTGGGGACCCAGC...CCCTTCAGCAAGGTGCTTCTTCACTCCATGGTTCGGGACAGGCAGGGCCGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000169093.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCGCCCGCAATGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGATGCTCGCTGGGCTGTaGGTGGGGCTCAGAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: ERPQCLYNLLDSGEAALQMLAGL*VGLRAP Trigger: GGGAGCTCTGAGCCCCACTCACAGCCCAGCGAGCAT...CTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATTGCGGGCGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGACGGGGCACGCTCGACAACACTGGCTTCACTGCTTCCAGGTAGACATCCCTACAGCCCCGCAGTaGCTCAGGATGCCCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: WGTGHARQHWLHCFQVDIPTAPQ*LRMPRG Trigger: GCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGG...GATGTCTACCTGGAAGCAGTGAAGCCAGTGTTGTCGAGCGTGCCCCGTCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCGCCCGCAATGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGTCGCTGGGCTGTGAGTaGGGCTCAGAGCTCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ERPQCLYNLLDSGEAALQSLGCE*GSELPG Trigger: GCCAGGGAGCTCTGAGCCCCACTCACAGCCCAGCGA...CTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATTGCGGGCGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCGCAGTGGCTCAGGATaGCCAGAGGCTCCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QESYSPAVAQDAQRLQKGRSGSG*PEAPER Trigger: CCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCG...CCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGGGACGGGGCACGCTCGACAACACTGGCTTCACTGCTTCCAGGTAGACATCTTGCTGAAGGGGAGCTaGCCAGTGAGCTGGGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: WGTGHARQHWLHCFQVDILLKGS*PVSWVP Trigger: GGGGACCCAGCTCACTGGGCAGCTCCCCTTCAGCAA...GATGTCTACCTGGAAGCAGTGAAGCCAGTGTTGTCGAGCGTGCCCCGTCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGAGTGAAGAAGCACCTTGCTGAAGGGGAGCTGCCCAGTGAGCTGGGTCCCGGGAGCTGCTGCCCCTaGGGACAGGAATCCTACAGC | + |
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Preference number: 2 (lower is better) Translates to: HGVKKHLAEGELPSELGPGSCCP*GQESYS Trigger: GCTGTAGGATTCCTGTCCCCAGGGGCAGCAGCTCCC...GGGACCCAGCTCACTGGGCAGCTCCCCTTCAGCAAGGTGCTTCTTCACTCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGGGACGGGGCACGCTCGACAACACTGGCTTCACTGCTTCCAGGTAGACATCCTCATCTTCCGGCCCTaGCTGTCCCGAACCATGGAG | + |
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Preference number: 2 (lower is better) Translates to: WGTGHARQHWLHCFQVDILIFRP*LSRTME Trigger: CTCCATGGTTCGGGACAGGCAGGGCCGGAAGATGAG...GATGTCTACCTGGAAGCAGTGAAGCCAGTGTTGTCGAGCGTGCCCCGTCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCACTGCAGCAGCACTTaGGGTCGGGCTTTTGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: QESYSPAVAQDAQRLQKGHCSST*GRAFVS Trigger: GCTCACAAAAGCCCGACCCCAAGTGCTGCTGCAGTG...CCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGAAATCCTCTGCTGCCTCTCTGCAAGACCCTCTGACATGGTCCGGTTCACCTACAGCCCCGCAGTaGCTCAGGATGCCCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GRKSSAASLQDPLTWSGSPTAPQ*LRMPRG Trigger: GCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGG...TGAACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGGTGAGCCGGGGCAGCTaGCTCTGGGGGTCCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: SSFSNRGTFRPAPSYRMRVSRGS*LWGSTR Trigger: CCTGGTGGACCCCCAGAGCCAGCTGCCCCGGCTCAC...CCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACTCCAGGTACCGTCTCTCAGCTTaGCCTGCAGCACCTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SWTLEKQRSSSGWRQNSRYRLSA*PAAPAA Trigger: AGCTGCAGGTGCTGCAGGCCAAGCTGAGAGACGGTA...CCTGGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGGAGGAAATCCTCTGCTGCCTCTCTGCAAGACCCTCTGACATGGTCCGGAGCTGCCCAGTGAGCTaGGTCCCCAGCATGACCATG | + |
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Preference number: 2 (lower is better) Translates to: WREEILCCLSARPSDMVRSCPVS*VPSMTM Trigger: CATGGTCATGCTGGGGACCCAGCTCACTGGGCAGCT...CCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTCCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGGAATCCAGGCATCCATaGGAGAGGAGGGGGTTACAC | + |
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Preference number: 2 (lower is better) Translates to: QESYSPAVAQDAQRLQKGESRHP*ERRGLH Trigger: GTGTAACCCCCTCCTCTCCCATGGATGCCTGGATTC...CCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGGTCCATGTCACAGCAAAGTGGGGATaGGGAAGCGGCTCAGCGGGT | + |
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Preference number: 2 (lower is better) Translates to: RGTFRPAPSYRMRKVVHVTAKWG*GSGSAG Trigger: ACCCGCTGAGCCGCTTCCCCATCCCCACTTTGCTGT...GACATGGACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGGCACGAAGTTATCCCCCAGGGCACGGAGGACAAAGCGCAGGGCATTCCAGCCTGTCCCGAACCATaGAGTGAAGAAGCACCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LGHEVIPQGTEDKAQGIPACPEP*SEEAPC Trigger: GCAAGGTGCTTCTTCACTCCATGGTTCGGGACAGGC...TGGAATGCCCTGCGCTTTGTCCTCCGTGCCCTGGGGGATAACTTCGTGCCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCGCCCGCAATGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGTCCATGGGAGCACAGTaGAAATCTCAGGGCATCCGT | + |
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Preference number: 2 (lower is better) Translates to: ERPQCLYNLLDSGEAALQSMGAQ*KSQGIR Trigger: ACGGATGCCCTGAGATTTGCACTGTGCTCCCATGGA...CTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATTGCGGGCGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCCAGGTAGACATCACAGAGATTGTGGAGCCAGAAATGATACAGGGTGTGGCTGGGTCCCCAGCATaGCCATGCGGCCCACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: CFQVDITEIVEPEMIQGVAGSPA*PCGPPR Trigger: TCTGGGTGGGCCGCATGGTCATGCTGGGGACCCAGC...CACACCCTGTATCATTTCTGGCTCCACAATCTCTGTGATGTCTACCTGGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAATAGCCTCCTTGAGCTCAAGTGGACCTTaGATGTGGTCAGTGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LFISGPPLACSPPPIASLSSSGP*MWSVCQ Trigger: CTGACACACTGACCACATCCAAGGTCCACTTGAGCT...CAAGGAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGGAAAAGAGCCGAAGAGAACCAAGTGTCCAGGACGTCAGGGTCCCTCTCGGTCAGCTCTGCCTCTaGTCTCCCTGTCCGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: KGEKSRREPSVQDVRVPLGQLCL*SPCPFC Trigger: GCAAAACGGACAGGGAGACCAGAGGCAGAGCTGACC...GAGAGGGACCCTGACGTCCTGGACACTTGGTTCTCTTCGGCTCTTTTCCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCGCAGTGGCTCAGGATaGCCAGAGGCTCCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PFISISSSFSNRGTFRPARSGSG*PEAPER Trigger: CCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCG...AGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTCCAGGTAGACATCACAGAGATTGTGGAGCCAGAAATGATACAGGGTGTTTGGCCTGCAGCACCTaGAGCTCCTGCCCGCTAATG | + |
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Preference number: 2 (lower is better) Translates to: LLPGRHHRDCGARNDTGCLACST*SSCPLM Trigger: CATTAGCGGGCAGGAGCTGCAGGTGCTGCAGGCCAA...ACACCCTGTATCATTTCTGGCTCCACAATCTCTGTGATGTCTACCTGGAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR-3UTR CCA 90 bp | TATCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGGGAGGCAGAGTAGGTaGGATGGGTCCAGGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: YPFISISSSFSNRGTFRPGRQSR*DGSRTA Trigger: GGCTGTCCTGGACCCATCCCACCTACTCTGCCTCCC...AGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTGCCTGGTCCAGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTGCCAAGACCCTCTGACATaGTCCGGTTCAACAGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: EAAWSSFDNSRWREEILCQDPLT*SGSTGH Trigger: ATGACCTGTTGAACCGGACCATGTCAGAGGGTCTTG...GCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGCTGAAAGGAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGATGCAGCCTGAGTTGTTaGTCAGCTAGGCTAAACTCC | + |
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Preference number: 2 (lower is better) Translates to: KKAERRRDTEPKPCTSARCSLSC*SARLNS Trigger: GGAGTTTAGCCTAGCTGATCAACAACTCAGGCTGCA...TCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTCCTTTCAGCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTGCCTGGTCCAGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTGCCATTCCAGAGCTTGTTaGAGAAATGGCGGTAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: EAAWSSFDNSRWREEILCHSRAC*RNGGSS Trigger: TGAACTACCGCCATTTCTGCAACAAGCTCTGGAATG...GCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCAGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR CAA 90 bp | TTATCCTTTTCTCCCTTGCATTTGATGGCTTTGAAACTGGCCGTCTaGCCCACTGACCCCAGAGGGAGGAAATCAGGAAGCCTTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LSFSPLHLMALKLAV*PTDPRGRKSGSLLF Trigger: GAAGAGAAGGCTTCCTGATTTCCTCCCTCTGGGGTCAGTGGGCAAGACGGCCAGTTTCAAAGCCATCAAATGCAAGGGAGAAAAGGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTTCTCCCTTGCATTTGATGGCTTTGAAACTGGCCGTCTTGCCCACTGACTCACACTTGCGTGCTTaGGGTTTATCCTTTTATCTC | + |
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Preference number: 2 (lower is better) Translates to: SFSPLHLMALKLAVLPTDSHLRA*GLSFYL Trigger: GAGATAAAAGGATAAACCCCAAGCACGCAAGTGTGA...GTCAGTGGGCAAGACGGCCAGTTTCAAAGCCATCAAATGCAAGGGAGAAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| 3UTR CCA 72 bp | AACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTaGCTGGCGCCAGAACTCCAGGCTGCGGGTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: NLLDSGEAALQL*LAPELQAAGAG Trigger: CCCAGCACCCGCAGCCTGGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| 3UTR CCA 72 bp | GGAGCGCCCGCAATGCCTGTACAACCTCTTGGACTCTaGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GAPAMPVQPLGL*RSSAPALAGAR Trigger: TCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATTGCGGGCGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGAGGGTGAGGGGGTAGAAGTGAGCAAGGTCTGGCGTCTCTCGCGGCCAACCGTCTCCCTGTCCGTTTaGCTGCTACCGCTCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: QEGEGVEVSKVWRLSRPTVSLSV*LLPLWP Trigger: AGGCCAGAGCGGTAGCAGCAAAACGGACAGGGAGAC...GGTTGGCCGCGAGAGACGCCAGACCTTGCTCACTTCTACCCCCTCACCCTCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
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| 3UTR GCA 72 bp | GGGACAGGAATCCTACAGCCCCGCAGTGGCTCAGGATaGCCAGAGGCTCCAGAAAGGGCTGGACTAGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GTGILQPRSGSG*PEAPERAGLGL Trigger: AAGGCCTAGTCCAGCCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTCCTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| 3UTR GCA 72 bp | TACCACTCGCTCTTCATCTCTGGGCCTCCCCTTGCATaGTCTCCGCCCCCAATAGCCTCCTTGGTACCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: YHSLFISGPPLA*SPPPIASLVPG Trigger: TCCGGGTACCAAGGAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAGCGAGTGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| 3UTR GCA 72 bp | CCCATTGCACCAATAGCAAGCAGGTCTGAGGAGGAATaGTCGCTGGGCTGTGAGTGGGGCTCAGAGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PIAPIASRSEEE*SLGCEWGSELP Trigger: AGGGAGCTCTGAGCCCCACTCACAGCCCAGCGAGCATTCCTCCTCAGACCTGCTTGCTATTGGTGCAATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| 3UTR CCA 72 bp | CTGCAAAGGCCAGGCGGCTTAGAATCCAGGCATCCATaGGAGAGGAGGGGGTTACACCTCCTCTGCTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LQRPGGLESRHP*ERRGLHLLCWL Trigger: CAACCAGCAGAGGAGGTGTAACCCCCTCCTCTCCCATGGATGCCTGGATTCTAAGCCGCCTGGCCTTTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGGACGGGGCACGCTCGACAACACTGGCTTCACTGCTTCCAGGTAGACATCTGCCTGTACAACCTCTaGGACTCTGGAGAAGCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: WGTGHARQHWLHCFQVDICLYNL*DSGEAA Trigger: CGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCA...GATGTCTACCTGGAAGCAGTGAAGCCAGTGTTGTCGAGCGTGCCCCGTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| 3UTR GCA 72 bp | GATCCCGTAAGGAAAGTCCTTTTTCTGTGCTGCGGCTaGAACGGCGAGCTCTCCAGGGTCCAAGTTACCGTC | + |
|
Preference number: 3 (lower is better) Translates to: DPVRKVLFLCCG*NGELSRVQVTV Trigger: GACGGTAACTTGGACCCTGGAGAGCTCGCCGTTGCAGCCGCAGCACAGAAAAAGGACTTTCCTTACGGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| 3UTR GCA 72 bp | CTCAGGGATCCCGTAAGGAAAGTCCTTTTTCTGTGCTaGGGCTGCAACGGCGAGCTCTCCAGGGTCCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LRDPVRKVLFLC*GCNGELSRVQV Trigger: AACTTGGACCCTGGAGAGCTCGCCGTTGCAGCCGCAGCACAGAAAAAGGACTTTCCTTACGGGATCCCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| 3UTR GCA 72 bp | ACACTCAGGGATCCCGTAAGGAAAGTCCTTTTTCTGTaGTGCGGCTGCAACGGCGAGCTCTCCAGGGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLRDPVRKVLFL*CGCNGELSRVQ Trigger: TTGGACCCTGGAGAGCTCGCCGTTGCAGCCGCAGCACAGAAAAAGGACTTTCCTTACGGGATCCCTGAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| 3UTR CCA 72 bp | TTCAGGAAGAGTGCAGACACATGGGGGCAGCTCAAGTaGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FRKSADTWGQLK*TLDVVSVSGWQ Trigger: CTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATGTGTCTGCACTCTTCCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAATCCTCTGCTGCCTCTCTGCAAGACCCTCTGACATGGTCCGGTTCAACTGCCTGTACAACCTCTaGGACTCTGGAGAAGCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: EEILCCLSARPSDMVRFNCLYNL*DSGEAA Trigger: CGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCA...GTTGAACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAATCCTCTGCTGCCTCTCTGCAAGACCCTCTGACATGGTCCGGTTCAACCTGCCTGGTCCAGCTTaGACAATTCCAGATGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EEILCCLSARPSDMVRFNLPGPA*TIPDGG Trigger: CCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCAG...GTTGAACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| 3UTR TCA 72 bp | ATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATaGGGAAGGTGGTCCATGTCACCTCTGAGGTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: IVALSDLLPPTE*GRWSMSPLRSH Trigger: ATGGGACCTCAGAGGTGACATGGACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| 3UTR TCA 72 bp | GGAGGAAATCCTCTGCTGCCTCTCTGCAAGACCCTCTaGCATGGTCCGGTTCAACAGGTCATCAAGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GGNPLLPLCKTL*HGPVQQVIKLL Trigger: AAGCAGCTTGATGACCTGTTGAACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| 3UTR GCA 72 bp | CTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTaGTCCCTCCTACAGAATGAGGAAGGTGGTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LLLILESWHFPT*SLLQNEEGGPC Trigger: ACATGGACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| 3UTR GCA 72 bp | AGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTaGTGCCTCTCTGCAAGACCCTCTGACATGGTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: SFDNSRWREEIL*CLSARPSDMVR Trigger: CCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| 3UTR CCA 72 bp | TCAGGAAGCCTTCTCTTCAGGAAGAGTGCAGACACATaGGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SGSLLFRKSADT*GQLKWTLDVVS Trigger: ACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATGTGTCTGCACTCTTCCTGAAGAGAAGGCTTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| 3UTR TCA 72 bp | CTCCTACAGAATGAGGAAGGTGGTCCATGTCACCTCTaGGGTCCCATTGCACCAATAGCAAGCAGGTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLQNEEGGPCHL*GPIAPIASRSE Trigger: CTCAGACCTGCTTGCTATTGGTGCAATGGGACCTCAGAGGTGACATGGACCACCTTCCTCATTCTGTAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| 3UTR TCA 72 bp | GCATTTGATGGCTTTGAAACTGGCCGTCTTGCCCACTaGCCCCAGAGGGAGGAAATCAGGAAGCCTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AFDGFETGRLAH*PQREEIRKPSL Trigger: AAGAGAAGGCTTCCTGATTTCCTCCCTCTGGGGTCAGTGGGCAAGACGGCCAGTTTCAAAGCCATCAAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| 3UTR TCA 72 bp | AGAGATTGTGGAGCCAGAAATGATACAGGGTGTGGGTaGCAAGCGAAAGCTCCCGACTCAGGAAGCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RDCGARNDTGCG*QAKAPDSGSLS Trigger: AGAGAGGCTTCCTGAGTCGGGAGCTTTCGCTTGTCACCCACACCCTGTATCATTTCTGGCTCCACAATCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| 3UTR GCA 72 bp | TTTGACAATTCCAGATGGAGGGAGGAAATCCTCTGCTaGCTCTCTGCAAGACCCTCTGACATGGTCCGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FDNSRWREEILC*LSARPSDMVRF Trigger: GAACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| 3UTR TCA 72 bp | ACCCGGAGTGCCAAGAATGTGCTATGTCAGCTTTTCTaGGCGTTCCTTCTAGGTGGGACATTTTCTTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TRSAKNVLCQLF*AFLLGGTFSCP Trigger: GGGGCAAGAAAATGTCCCACCTAGAAGGAACGCTCAGAAAAGCTGACATAGCACATTCTTGGCACTCCGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| 3UTR CCA 72 bp | GGGGCACAGGGCAGTAAAGGCTCACACTTGCGTGCTTaGGGTTTATCCTTTTATCTCCATCTCCTCCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: GAQGSKGSHLRA*GLSFYLHLLLI Trigger: AATGAGGAGGAGATGGAGATAAAAGGATAAACCCCAAGCACGCAAGTGTGAGCCTTTACTGCCCTGTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| 3UTR CCA 72 bp | AAATCCTCTGCTGCCTCTCTGCAAGACCCTCTGACATaGTCCGGTTCAACAGGTCATCAAGCTGCTTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KSSAASLQDPLT*SGSTGHQAASV Trigger: TACAGAAGCAGCTTGATGACCTGTTGAACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| 3UTR TCA 72 bp | GCCCGAAACAGGAGCACTTGTCAAAGTCACCAGGTTTaGAACTTTGCTACTGTAACAGAAAGGCGCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ARNRSTCQSHQV*NFATVTERRCS Trigger: GCTGCAGCGCCTTTCTGTTACAGTAGCAAAGTTTCAAACCTGGTGACTTTGACAAGTGCTCCTGTTTCGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| 3UTR CCA 72 bp | TCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTaGCACTTTCCGACCTGCTCCCTCCTACAGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFYLHLLLILES*HFPTCSLLQNE Trigger: CTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| 3UTR CCA 72 bp | TGTAATCACAGACGTCTTTATTACTGCAGGCTCGAGTaGCAGGCAGCCAGTAACCAGCACAGTTCACCATAC | + |
|
Preference number: 3 (lower is better) Translates to: CNHRRLYYCRLE*QAASNQHSSPY Trigger: GTATGGTGAACTGTGCTGGTTACTGGCTGCCTGCCACTCGAGCCTGCAGTAATAAAGACGTCTGTGATTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCCTCCTTGGTACCCGGAGTGCCAAGAATGTGCTATGTCAGCTTTTCTGAGTCAAAGTCACCAGGTTaGAAACTTTGCTACTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: IASLVPGVPRMCYVSFSESKSPG*KLCYCN Trigger: GTTACAGTAGCAAAGTTTCAAACCTGGTGACTTTGA...CTCAGAAAAGCTGACATAGCACATTCTTGGCACTCCGGGTACCAAGGAGGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | CATACCACTCGCTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAAGGTCAGGGCCCACCCTaGGGGAGCTGCTGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTTRSSSLGLPLHALRPQGQGPP*GSCCPW Trigger: CCAGGGGCAGCAGCTCCCTCAGGGTGGGCCCTGACC...TTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAGCGAGTGGTATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | CATACCACTCGCTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAAGGGCCACACAGATGCTaGGGGCAAGGGGGCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTTRSSSLGLPLHALRPQGPHRC*GQGGRL Trigger: CAGGCGGCCCCCTTGCCCCCAGCATCTGTGTGGCCC...TTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAGCGAGTGGTATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | AGGATGCCCAGAGGCTCCAGAAAGGGCTGGACTAGGCCTTGTTCTCCTGGGTCCGGGCCACACAGATGCTaGGGGCAAGGGGGCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RMPRGSRKGWTRPCSPGSGPHRC*GQGGRL Trigger: CAGGCGGCCCCCTTGCCCCCAGCATCTGTGTGGCCC...GGACCCAGGAGAACAAGGCCTAGTCCAGCCCTTTCTGGAGCCTCTGGGCATCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | GTCCGAGCACTGCAGCAGCACTTGGGGTCGGGCTTTTGTGAGCTGGTAGGTGGCTGGCCCCACCACAGCTaGCGGGAGACACACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRALQQHLGSGFCELVGGWPHHS*RETHQS Trigger: GGACTGGTGTGTCTCCCGGCAGCTGTGGTGGGGCCA...GCCACCTACCAGCTCACAAAAGCCCGACCCCAAGTGCTGCTGCAGTGCTCGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | GAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCTGTGGCCCCACCACAGCTaGCGGGAGACACACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESYSPAVAQDAQRLQKGLWPHHS*RETHQS Trigger: GGACTGGTGTGTCTCCCGGCAGCTGTGGTGGGGCCA...CAGCCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGGACAGGAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCACGTTCCCCAGGGACTTaGTCATCTTCCGGCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGTGILQPRSGSGCPEAPRSPGT*SSSGPA Trigger: GGCAGGGCCGGAAGATGAGCAAGTCCCTGGGGAACG...TGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTCCTGTCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCCTCGGCCAGGAAGGGCATCAGCGGGGCAAGGAGGCGTAGACCCACGTGTTGCCAGCTCTTCTaGTGGAAGGAGGGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSSSARKGISGARRRRPTCCQLF*WKEGQS Trigger: GCTCTGGCCCTCCTTCCACCAGAAGAGCTGGCAACA...CGTGGGTCTACGCCTCCTTGCCCCGCTGATGCCCTTCCTGGCCGAGGAGCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAACAGGAGCACTCGGGGCAGCTGGCTCTaGGGGTCCACCAGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRDTEPKPCTSARNRSTRGSWL*GSTRPC Trigger: GCAGGGCCTGGTGGACCCCCAGAGCCAGCTGCCCCG...AGTGCTCCTGTTTCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | CATGGAGTGAAGAAGCACCTTGCTGAAGGGGAGCTGCCCAGTGAGCTGGGTCCCTGGCCCCACCACAGCTaGCGGGAGACACACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HGVKKHLAEGELPSELGPWPHHS*RETHQS Trigger: GGACTGGTGTGTCTCCCGGCAGCTGTGGTGGGGCCA...GGGACCCAGCTCACTGGGCAGCTCCCCTTCAGCAAGGTGCTTCTTCACTCCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000169093.2 |
||
| CDS-3UTR GCA 90 bp | GTCCGAGCACTGCAGCAGCACTTGGGGTCGGGCTTTTGTGAGCTGGTAGGTGGCTTGCTGAAGGGGAGCTaGCCAGTGAGCTGGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VRALQQHLGSGFCELVGGLLKGS*PVSWVP Trigger: GGGGACCCAGCTCACTGGGCAGCTCCCCTTCAGCAA...GCCACCTACCAGCTCACAAAAGCCCGACCCCAAGTGCTGCTGCAGTGCTCGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | CTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAATAGCCTCCTTGGTGCAGCGCTCCAGCTCTaGCTGGCGCCAGAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHLWASPCMLSAPNSLLGAALQL*LAPELQ Trigger: CTGGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGC...ACCAAGGAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | CATGGGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGCCTACAGCCCCGCAGTaGCTCAGGATGCCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGGSSSGPWMWSVCQGGRPTAPQ*LRMPRG Trigger: GCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGG...CCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | AGGAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCAGTGGGGTCAGGCCATaGCGGGTCCCTATCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNPTAPQWLRMPRGSRKGSGVRP*RVPISA Trigger: TGCTGAGATAGGGACCCGGCATGGCCTGACCCCACT...GCCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCCCTGTCCGTTTTGCTaGTACCGCTCTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QESYSPAVAQDAQRLQKGPCPFC*YRSGLS Trigger: GCTGAGGCCAGAGCGGTAGCAGCAAAACGGACAGGG...CCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | TGGACTAGGCCTTGTTCTCCTGGGTCCGAGCACTGCAGCAGCACTTGGGGTCGGTTGGCCTGCAGCACCTaGAGCTCCTGCCCGCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: WTRPCSPGSEHCSSTWGRLACST*SSCPLM Trigger: CATTAGCGGGCAGGAGCTGCAGGTGCTGCAGGCCAA...CCGACCCCAAGTGCTGCTGCAGTGCTCGGACCCAGGAGAACAAGGCCTAGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGACTAGGCCTTGTTCTCCTGGGTCCGAGCACTGCAGCAGCACTTGGGGTCAGATGGGCAGTACCATaGGGTGCTCCTGTAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGLGLVLLGPSTAAALGVRWAVP*GAPVGP Trigger: GGGGCCTACAGGAGCACCCCATGGTACTGCCCATCT...GACCCCAAGTGCTGCTGCAGTGCTCGGACCCAGGAGAACAAGGCCTAGTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR TCA 90 bp | GAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCTGTCCCATCCTCTGCAATaGCACTCAGTGGGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESYSPAVAQDAQRLQKGLSHPLQ*HSVGSG Trigger: GCCTGACCCCACTGAGTGTCATTGCAGAGGATGGGA...CAGCCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGGTCCATGTCACCTCGCTGGGTCCCCAGCATaGCCATGCGGCCCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFPTCSLLQNEEGGPCHLAGSPA*PCGPPR Trigger: TCTGGGTGGGCCGCATGGTCATGCTGGGGACCCAGC...GAGGTGACATGGACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | CATGGGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGCCCTGTCCGTTTTGCTaGTACCGCTCTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGGSSSGPWMWSVCQGGRPCPFC*YRSGLS Trigger: GCTGAGGCCAGAGCGGTAGCAGCAAAACGGACAGGG...CCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | AATGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCATGACTCACCAGGCTaGGGGTGCTGGGGTAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NACTTSWTLEKQRSSSGWHDSPG*GCWGRG Trigger: CCCCCTACCCCAGCACCCGCAGCCTGGTGAGTCATG...CCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | CGGCCCACCCAGAACATCAGCAGGTCACTACCCGTTTCCAAGAGGGTGAGGGGGTGTTGCCAGCTCTTCTaGTGGAAGGAGGGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPTQNISRSLPVSKRVRGCCQLF*WKEGQS Trigger: GCTCTGGCCCTCCTTCCACCAGAAGAGCTGGCAACA...CCCCCTCACCCTCTTGGAAACGGGTAGTGACCTGCTGATGTTCTGGGTGGGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
||
| CDS-3UTR CCA 90 bp | GAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCTGGATGACCCGGTAGGCTaGAATCTGATGGCCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ESYSPAVAQDAQRLQKGLDDPVG*NLMAPP Trigger: TGGTGGGGCCATCAGATTCCAGCCTACCGGGTCATC...CAGCCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGCCCAGAGGCTCCAGAAAGGGCTGGACTAGGCCTTGTTCTCCTGGGTCCAGCTGCCCAGTGAGCTaGGTCCCCAGCATGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RMPRGSRKGWTRPCSPGSSCPVS*VPSMTM Trigger: CATGGTCATGCTGGGGACCCAGCTCACTGGGCAGCT...GGACCCAGGAGAACAAGGCCTAGTCCAGCCCTTTCTGGAGCCTCTGGGCATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACTCTTGGGAGGCAGAGTAGGTACCGTCTCTCAGCTTaGCCTGCAGCACCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSSAPALAGARTLGRQSRYRLSA*PAAPAA Trigger: AGCTGCAGGTGCTGCAGGCCAAGCTGAGAGACGGTA...CCTACTCTGCCTCCCAAGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAAGTGAGCCGGGGCAGCTaGCTCTGGGGGTCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPHSRIVALSDLLPPTEVSRGS*LWGSTR Trigger: CCTGGTGGACCCCCAGAGCCAGCTGCCCCGGCTCAC...TTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | CTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAATAGCCTCCTTGCTCGGGTCATCTGGATaGACGGCCACAGCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFISGPPLACSPPPIASLLGSSG*TATATS Trigger: AGATGTGGCTGTGGCCGTTCATCCAGATGACCCGAG...CAAGGAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | AATGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGGCAAGCAGGGCCACCTaGGCTGGGATCCCGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NACTTSWTLEKQRSSSGWASRAT*AGIPCE Trigger: TTCACACGGGATCCCAGCTCAGGTGGCCCTGCTTGC...CCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | CATACCACTCGCTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAACGGCTGTGTACAAAGTaGCTGGGGCCTGGAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: HTTRSSSLGLPLHALRPQRLCTK*LGPGKT Trigger: GGTCTTTCCAGGCCCCAGGCACTTTGTACACAGCCG...TTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAGCGAGTGGTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | GAAGCCCTCTCGCACCCACCACTGGTACCAGGCCGCTTCAACATACTGGGGACTCGGCTGTGTACAAAGTaGCTGGGGCCTGGAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EALSHPPLVPGRFNILGTRLCTK*LGPGKT Trigger: GGTCTTTCCAGGCCCCAGGCACTTTGTACACAGCCG...AGTCCCCAGTATGTTGAAGCGGCCTGGTACCAGTGGTGGGTGCGAGAGGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165144.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGGAAAAGTGGGGTCAGGCCATaGCGGGTCCCTATCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAAQVDLGCGQCVRVAGKSGVRP*RVPISA Trigger: TGCTGAGATAGGGACCCGGCATGGCCTGACCCCACT...TTTCCCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAGGAAATCCTCTGCTGCCTCTCTGCAAGACCCTCTGACATGGTCCGGAGTGGGGTCAGGCCATaGCGGGTCCCTATCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WREEILCCLSARPSDMVRSGVRP*RVPISA Trigger: TGCTGAGATAGGGACCCGGCATGGCCTGACCCCACT...CCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTCCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGACTTGCTCATCTTCCGGCCCTGCCTGTCCCGAACCATGGAGTGAAGAACCCTGTCCGTTTTGCTaGTACCGCTCTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGTCSSSGPACPEPWSEEPCPFC*YRSGLS Trigger: GCTGAGGCCAGAGCGGTAGCAGCAAAACGGACAGGG...TTCTTCACTCCATGGTTCGGGACAGGCAGGGCCGGAAGATGAGCAAGTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACTCTTGGGAGGTCCATGGGAGCACAGTaGAAATCTCAGGGCATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLWRSSAPALAGARTLGRSMGAQ*KSQGIR Trigger: ACGGATGCCCTGAGATTTGCACTGTGCTCCCATGGA...CCTCCCAAGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGGCCAGAACTCCAGGCTaGGGGTGCTGGGGTAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSFSNRGTFRPAPSYRMRARTPG*GCWGRG Trigger: CCCCCTACCCCAGCACCCGCAGCCTGGAGTTCTGGC...CCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | TCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACTCCAGGCCTTCACTGCCCCTGTaGCCACATGTGGCTGAACAN | + |
|
Preference number: 4 (lower is better) Translates to: SWTLEKQRSSSGWRQNSRPSLPL*PHVAEX Trigger: NTGTTCAGCCACATGTGGGCACAGGGGCAGTGAAGG...CCTGGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| CDS-3UTR CCA 90 bp | TACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACGGAACGGCTGCAGATaGGCAGTACCATGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNLLDSGEAALQLWLAPERNGCR*AVPWGA Trigger: AGCACCCCATGGTACTGCCCATCTGCAGCCGTTCCG...TTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGACTTGCTCATCTTCCGGCCCTGCCTGTCCCGAACCATGGAGTGAAGAACGGAACGGCTGCAGATaGGCAGTACCATGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGTCSSSGPACPEPWSEERNGCR*AVPWGA Trigger: AGCACCCCATGGTACTGCCCATCTGCAGCCGTTCCG...TTCTTCACTCCATGGTTCGGGACAGGCAGGGCCGGAAGATGAGCAAGTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000169093.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACTCCAGGCAGCGGACAAACCACTaGCTCTTCAGCAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWTLEKQRSSSGWRQNSRQRTNH*LFSRYS Trigger: GGAGTACCTGCTGAAGAGCCAGTGGTTTGTCCGCTG...CCTGGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| CDS-3UTR CCA 90 bp | CGCCCGCAATGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCAGGTCCCCCATTTCCTaGCAGCGGACAAACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPQCLYNLLDSGEAALQLRSPIS*QRTNHW Trigger: CCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGACCT...GAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATTGCGGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCTGGTCTCCCTGTCCGTTTTGCTGCTACCGCTCTGGCCTCAGCCTCTAGGTCCCCCATTTCCTaGCAGCGGACAAACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SASGLPVRFAATALASASRSPIS*QRTNHW Trigger: CCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGACCT...AGAGGCTGAGGCCAGAGCGGTAGCAGCAAAACGGACAGGGAGACCAGAGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
||
| CDS-3UTR CCA 90 bp | CGCTGGCTGCAAAGGCCAGGCGGCTTAGAATCCAGGCATCCATGGGAGAGGAGGCTGACTCCACAGCCTTaGCAGCTAGGTCCCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RWLQRPGGLESRHPWERRLTPQP*QLGPPF Trigger: AAATGGGGGACCTAGCTGCCAAGGCTGTGGAGTCAG...CCTCCTCTCCCATGGATGCCTGGATTCTAAGCCGCCTGGCCTTTGCAGCCAGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| CDS-3UTR CCA 90 bp | CGGCCCACCCAGAACATCAGCAGGTCACTACCCGTTTCCAAGAGGGTGAGGGGGCTGACTCCACAGCCTTaGCAGCTAGGTCCCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RPTQNISRSLPVSKRVRGLTPQP*QLGPPF Trigger: AAATGGGGGACCTAGCTGCCAAGGCTGTGGAGTCAG...CCCCCTCACCCTCTTGGAAACGGGTAGTGACCTGCTGATGTTCTGGGTGGGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
||
| CDS-3UTR CCA 90 bp | CATGGGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGTGTTGCCAGCTCTTCTaGTGGAAGGAGGGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGGSSSGPWMWSVCQGGRCCQLF*WKEGQS Trigger: GCTCTGGCCCTCCTTCCACCAGAAGAGCTGGCAACA...CCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | TTCCAAGAGGGTGAGGGGGTAGAAGTGAGCAAGGTCTGGCGTCTCTCGCGGCCAGATGACCCGGTAGGCTaGAATCTGATGGCCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FQEGEGVEVSKVWRLSRPDDPVG*NLMAPP Trigger: TGGTGGGGCCATCAGATTCCAGCCTACCGGGTCATC...TGGCCGCGAGAGACGCCAGACCTTGCTCACTTCTACCCCCTCACCCTCTTGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
||
| CDS-3UTR CCA 90 bp | TGGACTAGGCCTTGTTCTCCTGGGTCCGAGCACTGCAGCAGCACTTGGGGTCGGGCCTGTCCCGAACCATaGAGTGAAGAAGCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WTRPCSPGSEHCSSTWGRACPEP*SEEAPC Trigger: GCAAGGTGCTTCTTCACTCCATGGTTCGGGACAGGC...CCGACCCCAAGTGCTGCTGCAGTGCTCGGACCCAGGAGAACAAGGCCTAGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | CATGGAGTGAAGAAGCACCTTGCTGAAGGGGAGCTGCCCAGTGAGCTGGGTCCCGAAGTGAGCAAGGTCTaGCGTCCCTCTCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGVKKHLAEGELPSELGPEVSKV*RPSPGS Trigger: TGACCCTGGAGAGGGACGCCAGACCTTGCTCACTTC...GGGACCCAGCTCACTGGGCAGCTCCCCTTCAGCAAGGTGCTTCTTCACTCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGGACAGGAATCCTACAGCCCCGCAGTGGCTCAGGATGCCCAGAGGCTCCAGCATCTATTGGACTGTaGGCAGGAGTCACCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LGTGILQPRSGSGCPEAPASIGL*AGVTFT Trigger: AGTGAAGGTGACTCCTGCTCACAGTCCAATAGATGC...TGGAGCCTCTGGGCATCCTGAGCCACTGCGGGGCTGTAGGATTCCTGTCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGGAAATCCCATCCTCTGCAATaGCACTCAGTGGGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAAQVDLGCGQCVRVAGKSHPLQ*HSVGSG Trigger: GCCTGACCCCACTGAGTGTCATTGCAGAGGATGGGA...TTTCCCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | GGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACTCTTGGGAGGTTGTGGAGCCAGAAATaGTACAGGGTGTGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLWRSSAPALAGARTLGRLWSQK*YRVWVT Trigger: TGTCACCCACACCCTGTATCATTTCTGGCTCCACAA...CCTCCCAAGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR TCA 90 bp | CTCGCTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAATAGCCTCTGCCTGGTCCAGCTTTaGCAATTCCAGATGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LALHLWASPCMLSAPNSLCLVQL*QFQMEG Trigger: TCCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCA...GAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAGCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | CTCGCTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAATAGCCTCTGCTCCTTCCATAGCTaGTTCTCCACCATGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LALHLWASPCMLSAPNSLCSFHS*FSTMAC Trigger: ACAGGCCATGGTGGAGAAGCAGCTATGGAAGGAGCA...GAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAGCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | CTGGTCTCCCTGTCCGTTTTGCTGCTACCGCTCTGGCCTCAGCCTCTGACCGTCTGGGCAAACCAGTGTTaGCAGCTCTTCTGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSLSVLLLPLWPQPLTVWANQC*QLFWWK Trigger: CTTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCA...GACGGTCAGAGGCTGAGGCCAGAGCGGTAGCAGCAAAACGGACAGGGAGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAACAGGAGCACTCGCAGTGGCTCAGGATaGCCAGAGGCTCCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRRDTEPKPCTSARNRSTRSGSG*PEAPER Trigger: CCTTTCTGGAGCCTCTGGGCATCCTGAGCCACTGCG...AGTGCTCCTGTTTCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | AGGATGCCCAGAGGCTCCAGAAAGGGCTGGACTAGGCCTTGTTCTCCTGGGTCCCCCTGTGCCCACATGTaGCTGAACAGTGGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RMPRGSRKGWTRPCSPGSPCAHM*LNSGVC Trigger: ACAGACACCACTGTTCAGCCACATGTGGGCACAGGG...GGACCCAGGAGAACAAGGCCTAGTCCAGCCCTTTCTGGAGCCTCTGGGCATCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGGAAAAGGTCCCCCATTTCCTaGCAGCGGACAAACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAAQVDLGCGQCVRVAGKRSPIS*QRTNHW Trigger: CCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGACCT...TTTCCCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | AGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCTGGACTAGGCCTTGTTCTCGGTCAGCTCTGCCTCTaGTCTCCCTGTCCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSGCPEAPERAGLGLVLGQLCL*SPCPFC Trigger: GCAAAACGGACAGGGAGACCAGAGGCAGAGCTGACC...GAGAACAAGGCCTAGTCCAGCCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAACAGGAGCACTAGCTGCCCAGTGAGCTaGGTCCCCAGCATGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RRRDTEPKPCTSARNRSTSCPVS*VPSMTM Trigger: CATGGTCATGCTGGGGACCCAGCTCACTGGGCAGCT...AGTGCTCCTGTTTCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAACGCTCCAGCTCTGGCTaGCGCCAGAACTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPHSRIVALSDLLPPTERSSSG*RQNSRL Trigger: CAGCCTGGAGTTCTGGCGCCAGCCAGAGCTGGAGCG...TTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGGAAACACTGCAGCAGCACTTaGGGTCGGGCTTTTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAAQVDLGCGQCVRVAGKHCSST*GRAFVS Trigger: GCTCACAAAAGCCCGACCCCAAGTGCTGCTGCAGTG...TTTCCCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | CATACCACTCGCTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAAAGAGCTCCCTGGCACTaGGAGCCTCATCCATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTTRSSSLGLPLHALRPQRAPWH*EPHPSV Trigger: AACTGATGGATGAGGCTCCCAGTGCCAGGGAGCTCT...TTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAGCGAGTGGTATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | GGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGGAAACCTGATACTCTGGTTTaGAGAAGCCCTCTCGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GAAQVDLGCGQCVRVAGKPDTLV*RSPLAP Trigger: GGGTGCGAGAGGGCTTCTTCAAACCAGAGTATCAGG...TTTCCCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | TACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACCCTCAGTGTGCACATaGTCTTTTCCCGGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: YNLLDSGEAALQLWLAPEPSVCT*SFPGPQ Trigger: TTGTGGCCCGGGAAAAGATCATGTGCACACTGAGGG...TTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR TCA 90 bp | TTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCGCTGGGTCCCCAGCATaGCCATGCGGCCCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FYLHLLLILESWHFPTCSAGSPA*PCGPPR Trigger: TCTGGGTGGGCCGCATGGTCATGCTGGGGACCCAGC...GGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAATAGCCTCCTTGGCACTGCAGGTATCTTaGTCTTCTCAGCTAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFISGPPLACSPPPIASLALQVS*SSQLAQ Trigger: CTGGGCTAGCTGAGAAGAGCAAGATACCTGCAGTGC...CAAGGAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | TGCTCGCTGGGCTGTGAGTGGGGCTCAGAGCTCCCTGGCACTGGGAGCCTCATCCATTCCAGAGCTTGTTaGAGAAATGGCGGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLGCEWGSELPGTGSLIHSRAC*RNGGSS Trigger: TGAACTACCGCCATTTCTGCAACAAGCTCTGGAATG...GATGAGGCTCCCAGTGCCAGGGAGCTCTGAGCCCCACTCACAGCCCAGCGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGACACATGGGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGCAGGCGCTTCTGTTTaGCTTCACGGTTCCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRHMGAAQVDLGCGQCVRAGASV*LHGSSE Trigger: CTCGGAGGAACCGTGAAGCCAAACAGAAGCGCCTGC...CCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATGTGTCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CCA 90 bp | TTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGTCCAGGCAGGGTCTCTaGCCTGGTGGTTCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSNRGTFRPAPSYRMRKVSRQGL*PGGSHH Trigger: GTGGTGGGAACCACCAGGCCAGAGACCCTGCCTGGA...CACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CCA 90 bp | AAAGGGGAAAAGAGCCGAAGAGAACCAAGTGTCCAGGACGTCAGGGTCCCTCTCAGATGGGCAGTACCATaGGGTGCTCCTGTAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGEKSRREPSVQDVRVPLRWAVP*GAPVGP Trigger: GGGGCCTACAGGAGCACCCCATGGTACTGCCCATCT...GAGAGGGACCCTGACGTCCTGGACACTTGGTTCTCTTCGGCTCTTTTCCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
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| CDS-3UTR CCA 90 bp | CAATGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGTGTTGCCAGCTCTTCTaGTGGAAGGAGGGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QCLYNLLDSGEAALQLWLCCQLF*WKEGQS Trigger: GCTCTGGCCCTCCTTCCACCAGAAGAGCTGGCAACA...CAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| CDS-3UTR CCA 90 bp | GGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGGAAACAACCTCTTGGACTCTaGAGAAGCAGCGCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAAQVDLGCGQCVRVAGKQPLGL*RSSAPA Trigger: AGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTG...TTTCCCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR TCA 90 bp | TCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATTCCGTCACAGCTGCTaGGGAGCCGGCATCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPPHSRIVALSDLLPPTEFRHSC*GAGIHG Trigger: ACCATGGATGCCGGCTCCTCAGCAGCTGTGACGGAA...TTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR TCA 90 bp | GGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAACAGGAGCACTTGTCCCCTCAGTGTGCACATaGTCTTTTCCCGGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GETRSPNPVLLPETGALVPSVCT*SFPGPQ Trigger: TTGTGGCCCGGGAAAAGATCATGTGCACACTGAGGG...GACAAGTGCTCCTGTTTCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR TCA 90 bp | CTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAATAGCCTCCTTGGTTTGTGGAGCCAGAAATaGTACAGGGTGTGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LHLWASPCMLSAPNSLLGLWSQK*YRVWVT Trigger: TGTCACCCACACCCTGTATCATTTCTGGCTCCACAA...ACCAAGGAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR GCA 90 bp | GAGGCTGCCTGGTCCAGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTGCAGGAGTCACCTTCACTaGCCCTGTGCCCACATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAAWSSFDNSRWREEILCRSHLH*PCAHMW Trigger: CCACATGTGGGCACAGGGGCAGTGAAGGTGACTCCT...GCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTGGCCCCACCACAGCTaGCGGGAGACACACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLHLLLILESWHFPTCWPHHS*RETHQS Trigger: GGACTGGTGTGTCTCCCGGCAGCTGTGGTGGGGCCA...GCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR GCA 90 bp | CTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGCTCATCTTCCGGCCCTaGCTGTCCCGAACCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLILESWHFPTCSLLQNELIFRP*LSRTME Trigger: CTCCATGGTTCGGGACAGGCAGGGCCGGAAGATGAG...CTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR GCA 90 bp | AGGCTGCCTGGTCCAGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTGCTTCTCTCAGCTTGGCCTaGAGCACCTGCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLPGPALTIPDGGRKSSASLSLA*STCSSC Trigger: GCAGGAGCTGCAGGTGCTGCAGGCCAAGCTGAGAGA...AGCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAACAGGAGCACTTGCCCTGTGCCCACATGTaGCTGAACAGTGGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EERHGAQTLYFCPKQEHLPCAHM*LNSGVC Trigger: ACAGACACCACTGTTCAGCCACATGTGGGCACAGGG...CAAGTGCTCCTGTTTCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CCA 90 bp | AAAAAGGCTGAAAGGAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAGATGGGCAGTACCATaGGGTGCTCCTGTAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKAERRRDTEPKPCTSARRWAVP*GAPVGP Trigger: GGGGCCTACAGGAGCACCCCATGGTACTGCCCATCT...TCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTCCTTTCAGCCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CCA 90 bp | AGGCTGCCTGGTCCAGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTGCTAGATGGGCAGTACCATaGGGTGCTCCTGTAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLPGPALTIPDGGRKSSARWAVP*GAPVGP Trigger: GGGGCCTACAGGAGCACCCCATGGTACTGCCCATCT...AGCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| CDS-3UTR CCA 90 bp | AGTGGCAGGCAGCCAGTAACCAGCACAGTTCACCATACCACTCGCTCTTCATCTCGGAACGGCTGCAGATaGGCAGTACCATGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRQPVTSTVHHTTRSSSRNGCR*AVPWGA Trigger: AGCACCCCATGGTACTGCCCATCTGCAGCCGTTCCG...AGATGAAGAGCGAGTGGTATGGTGAACTGTGCTGGTTACTGGCTGCCTGCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CCA 90 bp | TCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGCGGAACGGCTGCAGATaGGCAGTACCATGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFSNRGTFRPAPSYRMRRNGCR*AVPWGA Trigger: AGCACCCCATGGTACTGCCCATCTGCAGCCGTTCCG...CCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR CCA 90 bp | AGGGGAAAAGAGCCGAAGAGAACCAAGTGTCCAGGACGTCAGGGTCCCTCTCCACAGCGGACAAACCACTaGCTCTTCAGCAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGKEPKRTKCPGRQGPSPQRTNH*LFSRYS Trigger: GGAGTACCTGCTGAAGAGCCAGTGGTTTGTCCGCTG...TGGAGAGGGACCCTGACGTCCTGGACACTTGGTTCTCTTCGGCTCTTTTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
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| CDS-3UTR CCA 90 bp | TGCAGACACATGGGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGCTGACTCCACAGCCTTaGCAGCTAGGTCCCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: CRHMGAAQVDLGCGQCVRLTPQP*QLGPPF Trigger: AAATGGGGGACCTAGCTGCCAAGGCTGTGGAGTCAG...CCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATGTGTCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CCA 90 bp | GAGGAAATCCTCTGCTGCCTCTCTGCAAGACCCTCTGACATGGTCCGGTTCAACGATGACCCGGTAGGCTaGAATCTGATGGCCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EEILCCLSARPSDMVRFNDDPVG*NLMAPP Trigger: TGGTGGGGCCATCAGATTCCAGCCTACCGGGTCATC...GTTGAACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| CDS-3UTR CCA 90 bp | GGGGCACGCTCGACAACACTGGCTTCACTGCTTCCAGGTAGACATCACAGAGATGGTCAGCTCTGCCTCTaGTCTCCCTGTCCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GARSTTLASLLPGRHHRDGQLCL*SPCPFC Trigger: GCAAAACGGACAGGGAGACCAGAGGCAGAGCTGACC...ATCTCTGTGATGTCTACCTGGAAGCAGTGAAGCCAGTGTTGTCGAGCGTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAACAGGAGCACTTGTCGCCTGTCCCGAACCATaGAGTGAAGAAGCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GETRSPNPVLLPETGALVACPEP*SEEAPC Trigger: GCAAGGTGCTTCTTCACTCCATGGTTCGGGACAGGC...GACAAGTGCTCCTGTTTCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CCA 90 bp | GAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAACAGGAGCACTTGGAATCCAGGCATCCATaGGAGAGGAGGGGGTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: EERHGAQTLYFCPKQEHLESRHP*ERRGLP Trigger: AGGTAACCCCCTCCTCTCCCATGGATGCCTGGATTC...CAAGTGCTCCTGTTTCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR TCA 90 bp | TCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGCCTGGATCGCCACTGTaGGTGCATGGCCAATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSFSNRGTFRPAPSYRMRPGSPL*VHGQCA Trigger: TGCACATTGGCCATGCACTCACAGTGGCGATCCAGG...CCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR TCA 90 bp | GGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGGTCCATGTCACCAAGTACATGACCAGTTaGCAAGCTGGCGGTTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTFRPAPSYRMRKVVHVTKYMTS*QAGGSG Trigger: ACCGGAACCGCCAGCTTGTCAACTGGTCATGTACTT...GGTGACATGGACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR TCA 90 bp | CGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGGTCCATGTCCGATCGCAAAGTACATaGCCAGTTGACAAGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGTFRPAPSYRMRKVVHVRSQST*PVDKLA Trigger: CGCCAGCTTGTCAACTGGTCATGTACTTTGCGATCG...GACATGGACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR TCA 90 bp | TTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGTCCCATCCTCTGCAATaGCACTCAGTGGGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSNRGTFRPAPSYRMRKVSHPLQ*HSVGSG Trigger: GCCTGACCCCACTGAGTGTCATTGCAGAGGATGGGA...CACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR TCA 90 bp | CTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGATACAGGGTGTGGGTaGCAAGCGAAAGCTCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLILESWHFPTCSLLQNEDTGCG*QAKAPD Trigger: GTCGGGAGCTTTCGCTTGTCACCCACACCCTGTATC...CTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR GCA 90 bp | TTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGCCTTCACTGCCCCTGTaGCCACATGTGGCTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FSNRGTFRPAPSYRMRKVPSLPL*PHVAEQ Trigger: CTGTTCAGCCACATGTGGGCACAGGGGCAGTGAAGG...CACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR GCA 90 bp | TCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAAAGGAGTCACCTTCACTaGCCCTGTGCCCACATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPHSRIVALSDLLPPTERSHLH*PCAHMW Trigger: CCACATGTGGGCACAGGGGCAGTGAAGGTGACTCCT...TTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR GCA 90 bp | CCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTTTGCTGAAGGGGAGCTaGCCAGTGAGCTGGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFISISSSFSNRGTFRPALLKGS*PVSWVP Trigger: GGGGACCCAGCTCACTGGGCAGCTCCCCTTCAGCAA...AGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCCGTTCCCCAGGGACTTaGTCATCTTCCGGCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLHLLLILESWHFPTCRSPGT*SSSGPA Trigger: GGCAGGGCCGGAAGATGAGCAAGTCCCTGGGGAACG...GCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR CCA 90 bp | GGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGGAAACCTTGCCTGATACTCTaGTTTGAAGAAGCCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GAAQVDLGCGQCVRVAGKPCLIL*FEEALS Trigger: CGAGAGGGCTTCTTCAAACCAGAGTATCAGGCAAGG...TTTCCCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CCA 90 bp | AAAAAGGCTGAAAGGAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAGGGTCTCTGGCCTGGTaGTTCCCACCACAATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKAERRRDTEPKPCTSARGSLAW*FPPQSL Trigger: CAGAGATTGTGGTGGGAACCACCAGGCCAGAGACCC...TCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTCCTTTCAGCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CCA 90 bp | CACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGGTCCATGTCACCTCCAGCGGACAAACCACTaGCTCTTCAGCAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFPTCSLLQNEEGGPCHLQRTNH*LFSRYS Trigger: GGAGTACCTGCTGAAGAGCCAGTGGTTTGTCCGCTG...GAGGTGACATGGACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR CCA 90 bp | GAGCTTGTTGCAGAAATGGCGGTAGTTCAGGACCTCAGAGACAGACAGGTGCAGAGGTCCCCCATTTCCTaGCAGCGGACAAACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELVAEMAVVQDLRDRQVQRSPIS*QRTNHW Trigger: CCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGACCT...CTGCACCTGTCTGTCTCTGAGGTCCTGAACTACCGCCATTTCTGCAACAAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGATGACCCGGTAGGCTaGAATCTGATGGCCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLILESWHFPTCSLLQNEDDPVG*NLMAPP Trigger: TGGTGGGGCCATCAGATTCCAGCCTACCGGGTCATC...CTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR CCA 90 bp | AGTGGCAGGCAGCCAGTAACCAGCACAGTTCACCATACCACTCGCTCTTCATCTGGTCAGCTCTGCCTCTaGTCTCCCTGTCCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGRQPVTSTVHHTTRSSSGQLCL*SPCPFC Trigger: GCAAAACGGACAGGGAGACCAGAGGCAGAGCTGACC...AGATGAAGAGCGAGTGGTATGGTGAACTGTGCTGGTTACTGGCTGCCTGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR TCA 90 bp | TTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGAGCCGGCATCCATGGTaGAACACTCTCGATCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSNRGTFRPAPSYRMRKVSRHPW*NTLDPS Trigger: ACTGGGATCGAGAGTGTTTCACCATGGATGCCGGCT...CACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR TCA 90 bp | GAGCTTGTTGCAGAAATGGCGGTAGTTCAGGACCTCAGAGACAGACAGGTGCAGCCCTCAGTGTGCACATaGTCTTTTCCCGGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ELVAEMAVVQDLRDRQVQPSVCT*SFPGPQ Trigger: TTGTGGCCCGGGAAAAGATCATGTGCACACTGAGGG...CTGCACCTGTCTGTCTCTGAGGTCCTGAACTACCGCCATTTCTGCAACAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
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| CDS-3UTR GCA 90 bp | TTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCATCTTCCGGCCCTaGCTGTCCCGAACCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FYLHLLLILESWHFPTCSLIFRP*LSRTME Trigger: CTCCATGGTTCGGGACAGGCAGGGCCGGAAGATGAG...GGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | ATAGCCTCCTTGGTACCCGGAGTGCCAAGAATGTGCTATGTCAGCTTTTCTGAGTTGGCCTGCAGCACCTaGAGCTCCTGCCCGCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: IASLVPGVPRMCYVSFSELACST*SSCPLM Trigger: CATTAGCGGGCAGGAGCTGCAGGTGCTGCAGGCCAA...CTCAGAAAAGCTGACATAGCACATTCTTGGCACTCCGGGTACCAAGGAGGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | CATACCACTCGCTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAACATTCCAGAGCTTGTTaGAGAAATGGCGGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTTRSSSLGLPLHALRPQHSRAC*RNGGSS Trigger: TGAACTACCGCCATTTCTGCAACAAGCTCTGGAATG...TTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAGCGAGTGGTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | CTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGTATCTCGGGTCATCTaGATGAACGGCCACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLILESWHFPTCSLLQNEVSRVI*MNGHSH Trigger: GTGGCTGTGGCCGTTCATCCAGATGACCCGAGATAC...CTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | CTCTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAATAGCCTCCTTGTATCTCAGCATCTATTaGACTGTGAGCAGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFISGPPLACSPPPIASLYLSIY*TVSRSH Trigger: GTGACTCCTGCTCACAGTCCAATAGATGCTGAGATA...CAAGGAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| 3UTR CAA 72 bp | TCTCCCTTGCATTTGATGGCTTTGAAACTGGCCGTCTaGCCCACTGACCCCAGAGGGAGGAAATCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLHLMALKLAV*PTDPRGRKSGS Trigger: GCTTCCTGATTTCCTCCCTCTGGGGTCAGTGGGCAAGACGGCCAGTTTCAAAGCCATCAAATGCAAGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | GAGGCTGCCTGGTCCAGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTGCGCATCTATTGGACTGTaGGCAGGAGTCACCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EAAWSSFDNSRWREEILCASIGL*AGVTFT Trigger: AGTGAAGGTGACTCCTGCTCACAGTCCAATAGATGC...GCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGCTGTGTAGCAATTCCTaGGTGATCAGACCCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSNRGTFRPAPSYRMRKVLCSNS*VIRPGD Trigger: ATCCCCGGGTCTGATCACGCAGGAATTGCTACACAG...CACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTCTCCCTTGCATTTGATGGCTTTGAAACTGGCCGTCTTGCCCACTGACAGGAGTCACCTTCACTaGCCCTGTGCCCACATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSPLHLMALKLAVLPTDRSHLH*PCAHMW Trigger: CCACATGTGGGCACAGGGGCAGTGAAGGTGACTCCT...GTCAGTGGGCAAGACGGCCAGTTTCAAAGCCATCAAATGCAAGGGAGAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGTGGGCAAACCAGTGTTaGCAGCTCTTCTGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSFSNRGTFRPAPSYRMRWANQC*QLFWWK Trigger: CTTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCA...CCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCCTGGTCCAGCTTTGACAATTCCAGATGGAGGGAGGAAATCCTCTGCTTGGGCAAACCAGTGTTaGCAGCTCTTCTGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLPGPALTIPDGGRKSSAWANQC*QLFWWK Trigger: CTTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCA...AGCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGCTTGGGGTTTATCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGTCTCTCAGCTTGGCCTaGAGCACCTGCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLGFILLSPSPPHSRIVSLSLA*STCSSC Trigger: GCAGGAGCTGCAGGTGCTGCAGGCCAAGCTGAGAGA...CACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGATAAACCCCAAGCACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCAAAAGACACAGGGGTTaGGCATCCGGGCAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFYLHLLLILESWHFPTCKRHRG*ASGQLQ Trigger: CTGCAGCTGCCCGGATGCCCAACCCCTGTGTCTTTT...GCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | CCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTGCAGGGTCTCTGGCCTaGTGGTTCCCACCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PFISISSSFSNRGTFRPAAGSLA*WFPPQS Trigger: AGATTGTGGTGGGAACCACCAGGCCAGAGACCCTGC...AGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | AGTGGCTCAGGATGCCCAGAGGCTCCAGAAAGGGCTGGACTAGGCCTTGTTCTCTATCTCAGCATCTATTaGACTGTGAGCAGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGSGCPEAPERAGLGLVLYLSIY*TVSRSH Trigger: GTGACTCCTGCTCACAGTCCAATAGATGCTGAGATA...GAGAACAAGGCCTAGTCCAGCCCTTTCTGGAGCCTCTGGGCATCCTGAGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTACCGTCTCTCAGCTTaGCCTGCAGCACCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFYLHLLLILESWHFPTCYRLSA*PAAPAA Trigger: AGCTGCAGGTGCTGCAGGCCAAGCTGAGAGACGGTA...GCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | CTCACACTTGCGTGCTTGGGGTTTATCCTTTTATCTCCATCTCCTCCTCATTCTGGGAGCTGCTGCCCCTaGGGACAGGAATCCTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLACLGFILLSPSPPHSGSCCP*GQESYS Trigger: GCTGTAGGATTCCTGTCCCCAGGGGCAGCAGCTCCC...AGAATGAGGAGGAGATGGAGATAAAAGGATAAACCCCAAGCACGCAAGTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | GCGTGCTTGGGGTTTATCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGATACAGGGTGTGGGTaGCAAGCGAAAGCTCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ACLGFILLSPSPPHSRIVDTGCG*QAKAPD Trigger: GTCGGGAGCTTTCGCTTGTCACCCACACCCTGTATC...CACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGATAAACCCCAAGCACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | ATAGCCTCCTTGGTACCCGGAGTGCCAAGAATGTGCTATGTCAGCTTTTCTGAGAGTGCATGGCCAATGTaGAGGGAGCCGGTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: IASLVPGVPRMCYVSFSESAWPM*REPVTL Trigger: CAATGTCACCGGCTCCCTGCACATTGGCCATGCACT...CTCAGAAAAGCTGACATAGCACATTCTTGGCACTCCGGGTACCAAGGAGGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTCTCCCTTGCATTTGATGGCTTTGAAACTGGCCGTCTTGCCCACTGACGATCGCCACTGTGAGTaGATGGCCAATGTGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFSPLHLMALKLAVLPTDDRHCE*MANVQG Trigger: TCCCTGCACATTGGCCATGCACTCACAGTGGCGATC...GTCAGTGGGCAAGACGGCCAGTTTCAAAGCCATCAAATGCAAGGGAGAAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | TATCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTAAAGTGCCTGGGGCCTaGAAAGACCCCATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YPFISISSSFSNRGTFRPKVPGA*KDPMRA Trigger: GGCCCTCATGGGGTCTTTCCAGGCCCCAGGCACTTT...AGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | CAATGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGTATCTCAGCATCTATTaGACTGTGAGCAGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QCLYNLLDSGEAALQLWLYLSIY*TVSRSH Trigger: GTGACTCCTGCTCACAGTCCAATAGATGCTGAGATA...CAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCCAGCGGACAAACCACTaGCTCTTCAGCAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLHLLLILESWHFPTCQRTNH*LFSRYS Trigger: GGAGTACCTGCTGAAGAGCCAGTGGTTTGTCCGCTG...GCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAACAGGAGCACTTTTGACAATTCCAGATaGAGGGAGGAAATCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRDTEPKPCTSARNRSTFDNSR*REEILC Trigger: GCAGAGGATTTCCTCCCTCCATCTGGAATTGTCAAA...AGTGCTCCTGTTTCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTCTCCCTTGCATTTGATGGCTTTGAAACTGGCCGTCTTGCCCACTGACAATACTACCTCCTTGTaGCTCCAGGCCTTAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFSPLHLMALKLAVLPTDNTTSL*LQALVG Trigger: GCCCACTAAGGCCTGGAGTCACAAGGAGGTAGTATT...GTCAGTGGGCAAGACGGCCAGTTTCAAAGCCATCAAATGCAAGGGAGAAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCATGGGAGCACAGTaGAAATCTCAGGGCATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SFYLHLLLILESWHFPTCSMGAQ*KSQGIR Trigger: ACGGATGCCCTGAGATTTGCACTGTGCTCCCATGGA...GCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGACACATGGGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGAACAGGTCATCAAGCTaGTTCTGTAACTTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRHMGAAQVDLGCGQCVRNRSSS*FCNFCL Trigger: AAGGCAGAAGTTACAGAAGCAGCTTGATGACCTGTT...CCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATGTGTCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | CAGAAACATCTTTCTTTTCACCTGGCCCGGTGGGGATTTCATACAATACTACCTAAAGTGCCTGGGGCCTaGAAAGACCCCATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKHLSFHLARWGFHTILPKVPGA*KDPMRA Trigger: GGCCCTCATGGGGTCTTTCCAGGCCCCAGGCACTTT...AGGTAGTATTGTATGAAATCCCCACCGGGCCAGGTGAAAAGAAAGATGTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000165144.2 |
||
| CDS-3UTR TCA 90 bp | ATAGCCTCCTTGGTACCCGGAGTGCCAAGAATGTGCTATGTCAGCTTTTCTGAGGCATCTATTGGACTGTaGGCAGGAGTCACCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: IASLVPGVPRMCYVSFSEASIGL*AGVTFT Trigger: AGTGAAGGTGACTCCTGCTCACAGTCCAATAGATGC...CTCAGAAAAGCTGACATAGCACATTCTTGGCACTCCGGGTACCAAGGAGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR GCA 90 bp | CCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTAGCTTGGGGCAGCCTTaGCTGATACTCTGGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFISISSSFSNRGTFRPASLGQP*LILWFE Trigger: TTCAAACCAGAGTATCAGGCAAGGCTGCCCCAAGCT...AGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | AACATCTTTCTTTTCACCTGGCCCGGTGGGGATTTCATACAATACTACCTCCTTGCAGGCGCTTCTGTTTaGCTTCACGGTTCCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NIFLFTWPGGDFIQYYLLAGASV*LHGSSE Trigger: CTCGGAGGAACCGTGAAGCCAAACAGAAGCGCCTGC...AAGGAGGTAGTATTGTATGAAATCCCCACCGGGCCAGGTGAAAAGAAAGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165144.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGTTTCACCTGGCCCGGTaGGGATTTCATACAATACTA | + |
|
Preference number: 4 (lower is better) Translates to: SSFSNRGTFRPAPSYRMRFHLAR*GFHTIL Trigger: TAGTATTGTATGAAATCCCCACCGGGCCAGGTGAAA...CCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | ATAGCCTCCTTGGTACCCGGAGTGCCAAGAATGTGCTATGTCAGCTTTTCTGAGGACCAGTTGACAAGCTaGCGGTTCCGGTACAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: IASLVPGVPRMCYVSFSEDQLTS*RFRYNN Trigger: ATTGTTGTACCGGAACCGCCAGCTTGTCAACTGGTC...CTCAGAAAAGCTGACATAGCACATTCTTGGCACTCCGGGTACCAAGGAGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | TATCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTCTGACTCCACAGCCTTaGCAGCTAGGTCCCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YPFISISSSFSNRGTFRPLTPQP*QLGPPF Trigger: AAATGGGGGACCTAGCTGCCAAGGCTGTGGAGTCAG...AGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| CDS-3UTR CCA 90 bp | TATCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGAATCCAGGCATCCATaGGAGAGGAGGGGGTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: YPFISISSSFSNRGTFRPESRHP*ERRGLP Trigger: AGGTAACCCCCTCCTCTCCCATGGATGCCTGGATTC...AGGTCGGAAAGTGCCACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| 3UTR CAA 72 bp | CAGCATGGCTCCCTTTTATCCTTTTCTCCCTTGCATTaGATGGCTTTGAAACTGGCCGTCTTGCCCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QHGSLLSFSPLH*MALKLAVLPTD Trigger: GTCAGTGGGCAAGACGGCCAGTTTCAAAGCCATCAAATGCAAGGGAGAAAAGGATAAAAGGGAGCCATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CCA 90 bp | GCGTGCTTGGGGTTTATCCTTTTATCTCCATCTCCTCCTCATTCTCGAATCGTGCAAGACCCTCTGACATaGTCCGGTTCAACAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ACLGFILLSPSPPHSRIVQDPLT*SGSTGH Trigger: ATGACCTGTTGAACCGGACCATGTCAGAGGGTCTTG...CACGATTCGAGAATGAGGAGGAGATGGAGATAAAAGGATAAACCCCAAGCACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR TCA 90 bp | AACATCTTTCTTTTCACCTGGCCCGGTGGGGATTTCATACAATACTACCTCCTTCACTGCAGGTATCCCTaGCCTTGCTCTTCTCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NIFLFTWPGGDFIQYYLLHCRYP*PCSSQL Trigger: TAGCTGAGAAGAGCAAGGTCAGGGATACCTGCAGTG...AAGGAGGTAGTATTGTATGAAATCCCCACCGGGCCAGGTGAAAAGAAAGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165144.2 |
||
| CDS GCA 90 bp | GAAGCAAGGAGCCCAAAAGACACAGGGGTTGGGCATCCGGGCAGCTaGAGCACCGTGCGGCCAGGCAGAGGCCGGCTTTCCACCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EARSPKDTGVGHPGS*STVRPGRGRLSTSM Trigger: CATTGAGGTGGAAAGCCGGCCTCTGCCTGGCCGCACGGTGCTGCAGCTGCCCGGATGCCCAACCCCTGTGTCTTTTGGGCTCCTTGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS CCA 90 bp | GCCTTGGCAGCTAGGTCCCCCATTTCCTGGCAGCGGACAAACCACTaGCTCTTCAGCAGGTACTCCACCACGTCCCCGGAACGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALAARSPISWQRTNH*LFSRYSTTSPERLQ Trigger: CTGCAGCCGTTCCGGGGACGTGGTGGAGTACCTGCTGAAGAGCCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGACCTAGCTGCCAAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043674.15 ENSMUST00000164404.8 ENSMUST00000168922.8 ENSMUST00000169093.2 |
||
| CDS CCA 90 bp | ATCCAGGCATCCATGGGAGAGGAGGGGGTTACCTCCTCTGCTGGTTaGGGCACGAAGTTATCCCCCAGGGCACGGAGGACAAAGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IQASMGEEGVTSSAG*GTKLSPRARRTKRR Trigger: CCTGCGCTTTGTCCTCCGTGCCCTGGGGGATAACTTCGTGCCCCAACCAGCAGAGGAGGTAACCCCCTCCTCTCCCATGGATGCCTGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
||
| CDS CCA 90 bp | AGAGCCCCTGACTCCACAGCCTTGGCAGCTAGGTCCCCCATTTCCTaGCAGCGGACAAACCACTGGCTCTTCAGCAGGTACTCCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: RAPDSTALAARSPIS*QRTNHWLFSRYSTT Trigger: CGTGGTGGAGTACCTGCTGAAGAGCCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGACCTAGCTGCCAAGGCTGTGGAGTCAGGGGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043674.15 ENSMUST00000164404.8 ENSMUST00000168922.8 ENSMUST00000169093.2 |
||
| CDS CCA 90 bp | CACCAGTCCCCAATGTGGGCAAACCAGTGTTGCCAGCTCTTCTGGTaGAAGGAGGGCCAGAGCTCCAGAGCCCCTGACTCCACAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HQSPMWANQCCQLFW*KEGQSSRAPDSTAL Trigger: CAAGGCTGTGGAGTCAGGGGCTCTGGAGCTCTGGCCCTCCTTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCACATTGGGGACTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043674.15 ENSMUST00000164404.8 ENSMUST00000168922.8 ENSMUST00000169093.2 |
||
| CDS-3UTR CAA 90 bp | CTTCATCTCTGGGCCTCCCCTTGCATGCTCTCCGCCCCCAATAGCCTCCTTGGTGGTCTCCCCTGTAGCTaGGGGCAGCCTTGCCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LHLWASPCMLSAPNSLLGGLPCS*GQPCLI Trigger: TATCAGGCAAGGCTGCCCCAAGCTACAGGGGAGACC...ACCAAGGAGGCTATTGGGGGCGGAGAGCATGCAAGGGGAGGCCCAGAGATGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
||
| CDS-3UTR CAA 90 bp | ACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACTCTTTACCGTCTCTCAGCTaGGCCTGCAGCACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSWTLEKQRSSSGWRQNSLPSLS*ACSTCS Trigger: GCTGCAGGTGCTGCAGGCCAAGCTGAGAGACGGTAA...AGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CAA 90 bp | GTCCGAGCACTGCAGCAGCACTTGGGGTCGGGCTTTTGTGAGCTGGTAGGTGGCTACCTCCTCTGCTGGTaGGGGCACGAAGTTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VRALQQHLGSGFCELVGGYLLCW*GHEVIP Trigger: GGGGATAACTTCGTGCCCCAACCAGCAGAGGAGGTA...GCCACCTACCAGCTCACAAAAGCCCGACCCCAAGTGCTGCTGCAGTGCTCGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168922.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCTGGCGCCAGAACTCCAGGGTGGGCAAACCAGTGTaGCCAGCTCTTCTGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SWTLEKQRSSSGWRQNSRVGKPV*PALLVE Trigger: TTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCAC...CCTGGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164404.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGGAAATCCTCTGCTGCCTCTCTGCAAGACCCTCTGACATGGTCCGGTGTCTCCCTGTCCGTTTaGCTGCTACCGCTCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGRKSSAASLQDPLTWSGVSLSV*LLPLWP Trigger: AGGCCAGAGCGGTAGCAGCAAAACGGACAGGGAGAC...ACCGGACCATGTCAGAGGGTCTTGCAGAGAGGCAGCAGAGGATTTCCTCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS CCA 90 bp | ACTCAGTGGGGTCAGGCCATGCCGGGTCCCTATCTCAGCATCTATTaGACTGTGAGCAGGAGTCACCTTCACTGCCCCTGTGCCCACATG | + |
|
Preference number: 5 (lower is better) Translates to: TQWGQAMPGPYLSIY*TVSRSHLHCPCAHM Trigger: CATGTGGGCACAGGGGCAGTGAAGGTGACTCCTGCTCACAGTCCAATAGATGCTGAGATAGGGACCCGGCATGGCCTGACCCCACTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043674.15 ENSMUST00000164404.8 ENSMUST00000168922.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGACACATGGGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGCAAAAGACACAGGGGTaGGGCATCCGGGCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CRHMGAAQVDLGCGQCVRQKTQG*GIRAAA Trigger: TGCAGCTGCCCGGATGCCCAACCCCTGTGTCTTTTG...CCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATGTGTCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CAA 90 bp | TTCCAAGAGGGTGAGGGGGTAGAAGTGAGCAAGGTCTGGCGTCTCTCGCGGCCAGTGGGCAAACCAGTGTaGCCAGCTCTTCTGGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: FQEGEGVEVSKVWRLSRPVGKPV*PALLVE Trigger: TTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCAC...TGGCCGCGAGAGACGCCAGACCTTGCTCACTTCTACCCCCTCACCCTCTTGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169093.2 |
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| CDS-3UTR CAA 90 bp | GGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGGTCCATGTCACCGTCTCCCTGTCCGTTTaGCTGCTACCGCTCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: GTFRPAPSYRMRKVVHVTVSLSV*LLPLWP Trigger: AGGCCAGAGCGGTAGCAGCAAAACGGACAGGGAGAC...GGTGACATGGACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR CAA 90 bp | CATGGGGGCAGCTCAAGTGGACCTTGGATGTGGTCAGTGTGTCAGGGTGGCAGGCTGCCTGGTCCAGCTTaGACAATTCCAGATGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: HGGSSSGPWMWSVCQGGRLPGPA*TIPDGG Trigger: CCCTCCATCTGGAATTGTCAAAGCTGGACCAGGCAG...CCTGCCACCCTGACACACTGACCACATCCAAGGTCCACTTGAGCTGCCCCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CAA 90 bp | AGAAGCCCTCTCGCACCCACCACTGGTACCAGGCCGCTTCAACATACTGGGGACCAGGTATCCCTGACCTaGCTCTTCTCAGCTAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: RSPLAPTTGTRPLQHTGDQVSLT*LFSASP Trigger: TGGGCTAGCTGAGAAGAGCAAGGTCAGGGATACCTG...GTCCCCAGTATGTTGAAGCGGCCTGGTACCAGTGGTGGGTGCGAGAGGGCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165144.2 |
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| CDS TCA 90 bp | CATAGATCTCCCCTCCTTTCTCATGTTTCCACTGCCACACGGCCCTaGGGAAGTCTTCCCGGCTCAGCTCATGTCTCCGCACCCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: HRSPLLSHVSTATRP*GSLPGSAHVSAPSA Trigger: AGCAGAGGGTGCGGAGACATGAGCTGAGCCGGGAAGACTTCCTCAGGGCCGTGTGGCAGTGGAAACATGAGAAAGGAGGGGAGATCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CAA 90 bp | CGCAATGCCTGTACAACCTCTTGGACTCTGGAGAAGCAGCGCTCCAGCTCTGGCGTGGGCAAACCAGTGTaGCCAGCTCTTCTGGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: RNACTTSWTLEKQRSSSGVGKPV*PALLVE Trigger: TTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCAC...GCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCATTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| CDS-3UTR CAA 90 bp | AGGAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAAACAGGAGCACTTACCTCCTCTGCTGGTaGGGGCACGAAGTTATCCCC | + |
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Preference number: 5 (lower is better) Translates to: RRRDTEPKPCTSARNRSTYLLCW*GHEVIP Trigger: GGGGATAACTTCGTGCCCCAACCAGCAGAGGAGGTA...AGTGCTCCTGTTTCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CAA 90 bp | TTCACCTGGCCCGGTGGGGATTTCATACAATACTACCTCCTTGTGACTCCAGGCCGCAGGCGCTTCTGTTaGGCTTCACGGTTCCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: FTWPGGDFIQYYLLVTPGRRRFC*ASRFLR Trigger: TCGGAGGAACCGTGAAGCCAAACAGAAGCGCCTGCG...GCCTGGAGTCACAAGGAGGTAGTATTGTATGAAATCCCCACCGGGCCAGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165144.2 |
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| CDS-3UTR CAA 90 bp | CACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGGTCCATGTCACCTCAGGGAGCCGGTGACATaGGGAGGTGGGATACACATG | + |
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Preference number: 5 (lower is better) Translates to: HFPTCSLLQNEEGGPCHLREPVT*GGGIHM Trigger: CATGTGTATCCCACCTCCCAATGTCACCGGCTCCCT...GAGGTGACATGGACCACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CAA 90 bp | TTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGGAAGGTGGTCTCCCTGTCCGTTTaGCTGCTACCGCTCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: FSNRGTFRPAPSYRMRKVVSLSV*LLPLWP Trigger: AGGCCAGAGCGGTAGCAGCAAAACGGACAGGGAGAC...CACCTTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR CAA 90 bp | AAAAAGGCTGAAAGGAGGAGAGACACGGAGCCCAAACCCTGTACTTCTGCCCGAGTGGGCAAACCAGTGTaGCCAGCTCTTCTGGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: KKAERRRDTEPKPCTSARVGKPV*PALLVE Trigger: TTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCAC...TCGGGCAGAAGTACAGGGTTTGGGCTCCGTGTCTCTCCTCCTTTCAGCCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CAA 90 bp | ATAGCCTCCTTGGTACCCGGAGTGCCAAGAATGTGCTATGTCAGCTTTTCTGAGTTACCGTCTCTCAGCTaGGCCTGCAGCACCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: IASLVPGVPRMCYVSFSELPSLS*ACSTCS Trigger: GCTGCAGGTGCTGCAGGCCAAGCTGAGAGACGGTAA...CTCAGAAAAGCTGACATAGCACATTCTTGGCACTCCGGGTACCAAGGAGGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CAA 90 bp | CTCCTCATTCTCGAATCGTGGCACTTTCCGACCTGCTCCCTCCTACAGAATGAGTGCCTGTACAACCTCTaGGACTCTGGAGAAGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: LLILESWHFPTCSLLQNECLYNL*DSGEAA Trigger: CGCTGCTTCTCCAGAGTCCAAGAGGTTGTACAGGCA...CTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTCGAGAATGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS TCA 90 bp | ACAGTGGTGTCTGTGATGAGGGGGAGAAGCTGTCCTGTCAAAGGATaGCGGAGCTGTCGCCCATGTAAATGCGTGTATCTCGGGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: TVVSVMRGRSCPVKG*RSCRPCKCVYLGSS Trigger: AGATGACCCGAGATACACGCATTTACATGGGCGACAGCTCCGTCATCCTTTGACAGGACAGCTTCTCCCCCTCATCACAGACACCACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS-3UTR CAA 90 bp | CTCACACTTGCGTGCTTGGGGTTTATCCTTTTATCTCCATCTCCTCCTCATTCTCGCAGGCGCTTCTGTTaGGCTTCACGGTTCCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: LTLACLGFILLSPSPPHSRRRFC*ASRFLR Trigger: TCGGAGGAACCGTGAAGCCAAACAGAAGCGCCTGCG...AGAATGAGGAGGAGATGGAGATAAAAGGATAAACCCCAAGCACGCAAGTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS TCA 90 bp | TTTTCACCTGGCCCGGTGGGGATTTCATACAATACTACCTCCTTGTaGCTCCAGGCCTTAGTGGGCACTGCAGGTATCTTGCTCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FSPGPVGISYNTTSL*LQALVGTAGILLFS Trigger: TGAGAAGAGCAAGATACCTGCAGTGCCCACTAAGGCCTGGAGTCACAAGGAGGTAGTATTGTATGAAATCCCCACCGGGCCAGGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS-3UTR CAA 90 bp | ATAGCCTCCTTGGTACCCGGAGTGCCAAGAATGTGCTATGTCAGCTTTTCTGAGAAAGTACATGACCAGTaGACAAGCTGGCGGTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: IASLVPGVPRMCYVSFSEKVHDQ*TSWRFR Trigger: CCGGAACCGCCAGCTTGTCAACTGGTCATGTACTTT...CTCAGAAAAGCTGACATAGCACATTCTTGGCACTCCGGGTACCAAGGAGGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS GCA 72 bp | CCGGGGATCCACAGCACGCGATCCCCACGCATCCGGTaGCAGCGCACAAGTGCGTCCTGGATCGCCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: PGIHSTRSPRIR*QRTSASWIATV Trigger: CACAGTGGCGATCCAGGACGCACTTGTGCGCTGGCACCGGATGCGTGGGGATCGCGTGCTGTGGATCCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS GCA 72 bp | AGCCCAAAAGACACAGGGGTTGGGCATCCGGGCAGCTaGAGCACCGTGCGGCCAGGCAGAGGCCGGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SPKDTGVGHPGS*STVRPGRGRLS Trigger: GGAAAGCCGGCCTCTGCCTGGCCGCACGGTGCTGCAGCTGCCCGGATGCCCAACCCCTGTGTCTTTTGGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS GCA 72 bp | ACACAGGGGTTGGGCATCCGGGCAGCTGCAGCACCGTaGGGCCAGGCAGAGGCCGGCTTTCCACCTCAATGT | + |
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Preference number: 6 (lower is better) Translates to: TQGLGIRAAAAP*GQAEAGFPPQC Trigger: ACATTGAGGTGGAAAGCCGGCCTCTGCCTGGCCGCACGGTGCTGCAGCTGCCCGGATGCCCAACCCCTGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS CCA 72 bp | TTGGCTTCACGGTTCCTCCGAGAGACAGGGGAGCCGTaGGGCTCCGGCTGTGTACAAAGTGCCTGGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LASRFLRETGEP*GSGCVQSAWGL Trigger: CAGGCCCCAGGCACTTTGTACACAGCCGGAGCCCCACGGCTCCCCTGTCTCTCGGAGGAACCGTGAAGCCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000165144.2 |
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| CDS GCA 72 bp | CACGCGATCCCCACGCATCCGGTGCCAGCGCACAAGTaGGTCCTGGATCGCCACTGTGAGTGCATGGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: HAIPTHPVPAHK*VLDRHCECMAN Trigger: ATTGGCCATGCACTCACAGTGGCGATCCAGGACGCACTTGTGCGCTGGCACCGGATGCGTGGGGATCGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS CCA 72 bp | AGCAACAGAAGCAAGGAGCCCAAAAGACACAGGGGTTaGGCATCCGGGCAGCTGCAGCACCGTGCGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SNRSKEPKRHRG*ASGQLQHRAAR Trigger: CCTGGCCGCACGGTGCTGCAGCTGCCCGGATGCCCAACCCCTGTGTCTTTTGGGCTCCTTGCTTCTGTTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS CAA 72 bp | AAGCAACAGAAGCAAGGAGCCCAAAAGACACAGGGGTaGGGCATCCGGGCAGCTGCAGCACCGTGCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: KQQKQGAQKTQG*GIRAAAAPCGQ Trigger: CTGGCCGCACGGTGCTGCAGCTGCCCGGATGCCCAACCCCTGTGTCTTTTGGGCTCCTTGCTTCTGTTGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS CCA 72 bp | GCTAGGTCCCCCATTTCCTGGCAGCGGACAAACCACTaGCTCTTCAGCAGGTACTCCACCACGTCCCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: ARSPISWQRTNH*LFSRYSTTSPE Trigger: TTCCGGGGACGTGGTGGAGTACCTGCTGAAGAGCCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGACCTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043674.15 ENSMUST00000164404.8 ENSMUST00000168922.8 ENSMUST00000169093.2 |
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| CDS CCA 72 bp | TCCCCAATGTGGGCAAACCAGTGTTGCCAGCTCTTCTaGTGGAAGGAGGGCCAGAGCTCCAGAGCCCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SPMWANQCCQLF*WKEGQSSRAPD Trigger: GTCAGGGGCTCTGGAGCTCTGGCCCTCCTTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCACATTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043674.15 ENSMUST00000164404.8 ENSMUST00000168922.8 ENSMUST00000169093.2 |
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| CDS TCA 72 bp | CCCCTCCTTTCTCATGTTTCCACTGCCACACGGCCCTaGGGAAGTCTTCCCGGCTCAGCTCATGTCTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: PLLSHVSTATRP*GSLPGSAHVSA Trigger: TGCGGAGACATGAGCTGAGCCGGGAAGACTTCCTCAGGGCCGTGTGGCAGTGGAAACATGAGAAAGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS GCA 72 bp | GAGACACACCAGTCCCCAATGTGGGCAAACCAGTGTTaGCAGCTCTTCTGGTGGAAGGAGGGCCAGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ETHQSPMWANQC*QLFWWKEGQSS Trigger: GGAGCTCTGGCCCTCCTTCCACCAGAAGAGCTGGCAACACTGGTTTGCCCACATTGGGGACTGGTGTGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043674.15 ENSMUST00000164404.8 ENSMUST00000168922.8 ENSMUST00000169093.2 |
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| CDS CCA 72 bp | GACTCCACAGCCTTGGCAGCTAGGTCCCCCATTTCCTaGCAGCGGACAAACCACTGGCTCTTCAGCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: DSTALAARSPIS*QRTNHWLFSRY Trigger: GTACCTGCTGAAGAGCCAGTGGTTTGTCCGCTGCCAGGAAATGGGGGACCTAGCTGCCAAGGCTGTGGAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043674.15 ENSMUST00000164404.8 ENSMUST00000168922.8 ENSMUST00000169093.2 |
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| CDS GCA 72 bp | AAGTCTTCCCGGCTCAGCTCATGTCTCCGCACCCTCTaGTCCTTCCATAGCTGCTTCTCCACCATGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: KSSRLSSCLRTL*SFHSCFSTMAC Trigger: ACAGGCCATGGTGGAGAAGCAGCTATGGAAGGAGCAGAGGGTGCGGAGACATGAGCTGAGCCGGGAAGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS GCA 72 bp | CCGTCCGACCACCCAACATTCCTTCCTGTCATCCTCTaGATTCTCCCCGATGACCCGGTAGGCTGGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: PSDHPTFLPVIL*ILPDDPVGWNL Trigger: CAGATTCCAGCCTACCGGGTCATCGGGGAGAATGCAGAGGATGACAGGAAGGAATGTTGGGTGGTCGGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043674.15 ENSMUST00000164404.8 ENSMUST00000168922.8 |
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| CDS GCA 72 bp | AGCTCATGTCTCCGCACCCTCTGCTCCTTCCATAGCTaGTTCTCCACCATGGCCTGTGTAGCAATTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: SSCLRTLCSFHS*FSTMACVAIPA Trigger: CGCAGGAATTGCTACACAGGCCATGGTGGAGAAGCAGCTATGGAAGGAGCAGAGGGTGCGGAGACATGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS TCA 72 bp | GTTGTAGAGTCGCACGAAAGCTTCCGTCACAGCTGCTaGGGAGCCGGCATCCATGGTGAAACACTCTCGATC | + |
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Preference number: 6 (lower is better) Translates to: VVESHESFRHSC*GAGIHGETLSI Trigger: GATCGAGAGTGTTTCACCATGGATGCCGGCTCCTCAGCAGCTGTGACGGAAGCTTTCGTGCGACTCTACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS TCA 72 bp | TGTCTGAGATGGCCGATCGCAAAGTACATGACCAGTTaGCAAGCTGGCGGTTCCGGTACAACAATCCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: CLRWPIAKYMTS*QAGGSGTTIPS Trigger: ACTCGGGATTGTTGTACCGGAACCGCCAGCTTGTCAACTGGTCATGTACTTTGCGATCGGCCATCTCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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| CDS TCA 72 bp | TCTGTGATGAGGGGGAGAAGCTGTCCTGTCAAAGGATaGCGGAGCTGTCGCCCATGTAAATGCGTGTATCTC | + |
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Preference number: 6 (lower is better) Translates to: SVMRGRSCPVKG*RSCRPCKCVYL Trigger: GAGATACACGCATTTACATGGGCGACAGCTCCGTCATCCTTTGACAGGACAGCTTCTCCCCCTCATCACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043674.15 ENSMUST00000168922.8 |
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| CDS CAA 72 bp | ATGTCTGAGATGGCCGATCGCAAAGTACATGACCAGTaGACAAGCTGGCGGTTCCGGTACAACAATCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: MSEMADRKVHDQ*TSWRFRYNNPE Trigger: CTCGGGATTGTTGTACCGGAACCGCCAGCTTGTCAACTGGTCATGTACTTTGCGATCGGCCATCTCAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043674.15 |
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