Pregenerated sensors for VARS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007029Ensembl transcript IDs: ENSMUST00000087315.14, ENSMUST00000172570.2, ENSMUST00000173142.2, ENSMUST00000173584.8, ENSMUST00000174260.8
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGAGGCCGCCAGGTCCCTaGTCCAGGGCGGGCAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMRPPGP*SRAGRR Trigger: TCGCCTGCCCGCCCTGGAGCAGGGACCTGGCGGCCT...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGACTGGACCAGGACAGCTaGCCGGCTGCCCCCGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGLDQDS*PAAPGS Trigger: GGACCCGGGGGCAGCCGGGCAGCTGTCCTGGTCCAG...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCCTCGCGGCCCAGCTaGTGCCGGTTCAGACCCCGC | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNASRPS*CRFRPR Trigger: GCGGGGTCTGAACCGGCACCAGCTGGGCCGCGAGGC...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCGTATCGGGCAGCGATaGGGGCTCGGAGGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMRIGQR*GLGGWG Trigger: TCCCCAGCCTCCGAGCCCTCATCGCTGCCCGATACG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGGCTACAGCGCAGCCCTaGGGTGCAGGAGCACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMATAQP*GAGAPR Trigger: CCTGGGTGCTCCTGCACCGCAGGGCTGCGCTGTAGC...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGGCAGCACTGGCAGCCTaGGCCATCTCCCCACAGCGC | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWAALAA*AISPQR Trigger: GCGCTGTGGGGAGATGGCTCAGGCTGCCAGTGCTGC...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGTCGCGGCCCAGCTGGTaGCGGTTCAGACCCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWSRPSW*RFRPRS Trigger: AGAGCGGGGTCTGAACCGGCACCAGCTGGGCCGCGA...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGGCCCCGCTCCTTCAGTaGCGCCAGCACAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMAPLLQ*RQHSLP Trigger: AGGAAGGCTGTGCTGGCGGCACTGAAGGAGCGGGGC...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGCCACCACGCCCGCACTaGCCAGAGCCTGCACGTAGC | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWPPRPH*PEPARS Trigger: GCTACGTGCAGGCTCTGGCCAGTGCGGGCGTGGTGG...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGGCAGCCTGGGGATCCTaGCCAGGACCTCGAAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWAAWGS*PGPRSP Trigger: GGGACTTCGAGGTCCTGGTCAGGATCCCCAGGCTGC...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCCCGTACTCTGGCTTaGAGAAGCCCTGCCGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNARTLA*RSPAAP Trigger: GGGAGCGGCAGGGCTTCTTCAAGCCAGAGTACGGGC...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGCCTGGATGGCGTTGGTaGGTGCGTGGCCCAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWPGWRW*VRGPGA Trigger: TGCACCTGGGCCACGCACTCACCAACGCCATCCAGG...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGGGTGCAGGACCAGTTaGCCAGGCGGGTGCTACGGT | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNGCRTS*PGGCYG Trigger: ACCGTAGCACCCGCCTGGTCAACTGGTCCTGCACCC...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCCATGGGGTTGTCCTTaGCTCCACGGAACAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMPWGCP*LHGTGP Trigger: GGGGCCTGTTCCGTGGAGTCAAGGACAACCCCATGG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGCTTCAGGCCGAGCATaGCCATCCGGGCCACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGASGRA*PSGPPR Trigger: TCTGGGTGGCCCGGATGGTCATGCTCGGCCTGAAGC...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGGAATGGAGTCCGGCTaGTCGGGGGAGGCTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNGMESG*SGEAAS Trigger: GCTTGCAGCCTCCCCCGAGCAGCCGGACTCCATTCC...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGACTGCCGAGCACACTCTaGCGCCACCTGGTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGLPSTL*RHLVHS Trigger: GGAGTGGACCAGGTGGCGGCAGAGTGTGCTCGGCAG...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGCTTGGCCTGCAGCTTaGCCAACTCCCGGGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGAWPAA*PTPGLG Trigger: ACCCAGCCCGGGAGTTGGGCAAGCTGCAGGCCAAGC...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGCTTCCAGGAGCACTCTaGGGGCTCTGGGTACGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWLPGAL*GLWVRG Trigger: ACCCCGTACCCAGAGCCCTCAGAGTGCTCCTGGAAG...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAACCAGCGAGTCACATTaGCCCAGATCCGGCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGTSESH*PRSGGQ Trigger: CTGCCCGCCGGATCTGGGGCAATGTGACTCGCTGGT...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGATCTCCGTGCGGGGGCTaGTGCTGGGTCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGSPCGG*CWVFCF Trigger: GAAGCAGAAGACCCAGCAGCAGCCCCCGCACGGAGA...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGTGCGTGGCCCAGGTaGAGGGAGCCTGTCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWSAWPR*REPVTL Trigger: CAACGTGACAGGCTCCCTGCACCTGGGCCACGCACT...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGTGGTCTCCCCACGCATaGGGTGCCATCGAGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWWSPHA*GAIESG Trigger: CCCTGACTCGATGGCACCGCATGCGTGGGGAGACCA...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCCTCAGTTAGGCGGCTaGGGATCCAGCGGTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNPQLGG*GSSGPP Trigger: TGGTGGACCGCTGGATCCGCAGCCGCCTAACTGAGG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGGGTCCACTAGCCCCTaGAGCTGCAGGTGGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGGSTSP*SCRWME Trigger: CTCCATCCACCTGCAGCTGCAGGGGCTAGTGGACCC...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGCTGCCGCTCCCACCATaGATACCAGGCAGCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWLPLPP*IPGSLH Trigger: GTGGAGGCTGCCTGGTATCCATGGTGGGAGCGGCAG...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCGAGTCAGGGAGTCCTaGATGGCGTTGGTGAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMRVRES*MALVSA Trigger: CGCACTCACCAACGCCATCCAGGACTCCCTGACTCG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGTCCTGGCCTCAAACCTaGGCAGGCCCAGGAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMSWPQT*AGPGKV Trigger: CACCTTTCCTGGGCCTGCCCAGGTTTGAGGCCAGGA...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCCAGCACAGCCTTCCTaGCCTCAAACCTGGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNPAQPS*PQTWAG Trigger: GCCTGCCCAGGTTTGAGGCCAGGAAGGCTGTGCTGG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGGGGTCACAGCAGCACTaGCAGCCTGAGCCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWGSQQH*QPEPSP Trigger: GGGAGATGGCTCAGGCTGCCAGTGCTGCTGTGACCC...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGACCACCTGGGTGGCAATaGCTGCATGGTCACAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGPPGWQ*LHGHSL Trigger: CAGGCTGTGACCATGCAGGCATTGCCACCCAGGTGG...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGTCCACCAGGCTCTCGTaGCCTTCAGGCTTGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMSTRLS*PSGLEV Trigger: AACCTCCAAGCCTGAAGGGCACGAGAGCCTGGTGGA...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATAGGACGCCCGTACTCTaGCTTGAAGAAGCCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNRTPVL*LEEALP Trigger: CGGCAGGGCTTCTTCAAGCCAGAGTACGGGCGTCCT...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGGGGAGCCTGTCACGTTaGGGGGTGGGATGCACATCA | + |
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Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWGSLSR*GVGCTS Trigger: TGATGTGCATCCCACCCCCCAACGTGACAGGCTCCC...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGACTGGGTTCCATAGGGTaGTCTCCCCACGCATGCGGT | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGLGSIG*SPHACG Trigger: ACCGCATGCGTGGGGAGACCACCCTATGGAACCCAG...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGACCACCACCACCTGGGTaGCAATGCCTGCATGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGPPPPG*QCLHGH Trigger: GTGACCATGCAGGCATTGCCACCCAGGTGGTGGTGG...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGGCTCCACCACATCCTTaGAGCGGTTGCAAAGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMAPPHP*SGCKAA Trigger: TGCCGCTTTGCAACCGCTCCAAGGATGTGGTGGAGC...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGGTGCCTCACTTCGCTTaGCCTGCAGCTTGCCCAACT | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMVPHFA*PAACPT Trigger: AGTTGGGCAAGCTGCAGGCCAAGCGAAGTGAGGCAC...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGGATGAGGGCCCCCTTTaGGTCCATGATGCTAATGGC | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMDEGPL*VHDANG Trigger: GCCATTAGCATCATGGACTCAAAGGGGGCCCTCATC...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR TCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCCTCATCCACCTTCCTaGGCTCCGCCTCTGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNPHPPS*APPLSV Trigger: AACAGACAGAGGCGGAGCTCAGGAAGGTGGATGAGG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGGCTTGAAGAAGCCCTaGCGCTCCCACCATGGATAC | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGGLKKP*RSHHGY Trigger: GTATCCATGGTGGGAGCGGCAGGGCTTCTTCAAGCC...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCTGGGTGGCAATGCCTaGATGGTCACAGCCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNLGGNA*MVTAWV Trigger: AACCCAGGCTGTGACCATGCAGGCATTGCCACCCAG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCTCAATCCGGGTTGTTaGCACCACCACCTCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNLNPGC*HHHLLV Trigger: GACGAGGAGGTGGTGGTGGCAACAACCCGGATTGAG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR GCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCTGGGATCCTTGGGGTaGACAGCTACAGCCACGTCT | + |
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Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNLGSLG*TATATS Trigger: AGACGTGGCTGTAGCTGTGCACCCCAAGGATCCCAG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCCACGTCTCCCAGCATaGTCTCAATCCGGGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMPRLPA*SQSGLL Trigger: CAACAACCCGGATTGAGACCATGCTGGGAGACGTGG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGACAGGCCCAGGAAAGGTaGAGGCACATTGATGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGQAQER*RHIDEG Trigger: GCCCTCATCAATGTGCCTCCACCTTTCCTGGGCCTG...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGTGGGCCAGCCAAAGATaGAGAAGGGAAAGAGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMWASQR*RRERDR Trigger: CCGGTCTCTTTCCCTTCTCCATCTTTGGCTGGCCCA...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCACTCTGCCGCCACCTaGTCCACTCCATTCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNHSAAT*STPFST Trigger: TGTGCTGAATGGAGTGGACCAGGTGGCGGCAGAGTG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR TCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGTGGGATGCACATCATaGAGACACCCCGGGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGVGCTS*RHPGDL Trigger: CAAATCCCCGGGGTGTCTTCATGATGTGCATCCCAC...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR TCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCTGAGGTCTTCTGACTaGTTGGGCCAGCCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMLRSSD*LGQPKM Trigger: CATCTTTGGCTGGCCCAATCAGTCAGAAGACCTCAG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR GCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGGTCATTTTGGTCATGTaGCGGGGTGATCTTCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMVILVM*RGDLHG Trigger: GCCGTGAAGATCACCCCGGCACATGACCAAAATGAC...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGATTTCTTCTCCCCCGGTaGGGTAGGGAGGTCATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGFLLPR*GREVIG Trigger: ACCTATGACCTCCCTACCCCACCGGGGGAGAAGAAA...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGGTGGCAATGCCTGCATaGTCACAGCCTGGGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWVAMPA*SQPGFH Trigger: ATGGAACCCAGGCTGTGACCATGCAGGCATTGCCAC...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGTTTTCCACCACCACCTaGGTGGCAATGCCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWFSTTT*VAMPAW Trigger: CCATGCAGGCATTGCCACCCAGGTGGTGGTGGAAAA...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGGTATCTGGGATCCTTaGGGTGCACAGCTACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGGIWDP*GAQLQP Trigger: TGGCTGTAGCTGTGCACCCCAAGGATCCCAGATACC...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGTGCAAGGAAACTCCATaGATGACATCCAGGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMCKETP*MTSRGS Trigger: CGACCCCCTGGATGTCATCCATGGAGTTTCCTTGCA...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCTTCATCTGCCTCCTaGACCTCAAGGGGCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNASSAS*TSRGTF Trigger: AAAGGTGCCCCTTGAGGTCCAGGAGGCAGATGAAGC...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR TCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGCACACTGAGGTCTTCTaGCTGATTGGGCCAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWHTEVF*LIGPAK Trigger: TTTGGCTGGCCCAATCAGTCAGAAGACCTCAGTGTG...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR TCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGACTCATCTTCCTGCCATaGGCATCACGCACGATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGLIFLP*ASRTIA Trigger: TGCAATCGTGCGTGATGCTCATGGCAGGAAGATGAG...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR TCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAAGTTTGTTGCAGAAGTaGCGGTACCCCAGGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGSLLQK*RYPRIL Trigger: CAGGATCCTGGGGTACCGTCACTTCTGCAACAAACT...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGGATGACCTCAGAGCCTaGCTGTTGAGTGACAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWDDLRA*LLSDRP Trigger: AGGTCTGTCACTCAACAGCCAGGCTCTGAGGTCATC...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGTTAAGTGCTGGTATCTaGGATCCTTGGGGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMLSAGI*DPWGAQ Trigger: CTGTGCACCCCAAGGATCCCAGATACCAGCACTTAA...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGTCATCGAAGACGATaGGAAGGCTCCGGGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWSHRRR*EGSGTR Trigger: TCTTGTCCCGGAGCCTTCCCATCGTCTTCGATGACT...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR TCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAACATCCTCATCTTGCTaGAGGCTGATCTTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGTSSSC*RLILSG Trigger: CCCTGACAAGATCAGCCTTCAGCAAGATGAGGATGT...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR TCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCAGGGTAGAACACACTaGGGTCTTCTGACTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNQGRTH*GLLTDW Trigger: CCAATCAGTCAGAAGACCTCAGTGTGTTCTACCCTG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR TCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGTGTTCACATCCAGGTTaGTGTCTCGACCTTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWCSHPG*CLDLGM Trigger: CATCCCAAGGTCGAGACATCAACCTGGATGTGAACA...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR GCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAACTTGCTCATCTTCCTaGCATGAGCATCACGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGTCSSS*HEHHAR Trigger: TCGTGCGTGATGCTCATGGCAGGAAGATGAGCAAGT...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGATGTAGGAGTCGGGCATaGCGCCACTTACATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGCRSRA*RHLHLS Trigger: AGAAAGATGTAAGTGGCGCCATGCCCGACTCCTACA...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGGTCTTCTGACTGATTaGGCCAGCCAAAGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NILLLPSLLMEHWGLRVGGLLTD*ASQRWR Trigger: TCTCCATCTTTGGCTGGCCCAATCAGTCAGAAGACC...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCTTTCTCCACCTCACTaGGATCCAGGTTGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNLSPPH*DPGCCS Trigger: TGAACAGCAACCTGGATCCCAGTGAGGTGGAGAAAG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR GCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATTGCTGCTGGGTCTTCTaGTTCTGCTGGAATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNCCWVF*FCWNFS Trigger: AGAGAAATTCCAGCAGAAGCAGAAGACCCAGCAGCA...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR GCA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCCCAGTCCAAGGAGCTaGCAAGTTTCTTTAATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMPSPRS*QVSLIG Trigger: ACCAATTAAAGAAACTTGGCAGCTCCTTGGACTGGG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR GCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCATTGCCAAGAGACTTaGTCATCTTCCTGCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNHCQET*SSSCHE Trigger: CTCATGGCAGGAAGATGAGCAAGTCTCTTGGCAATG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR GCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGCACTGGGATCCAGGTTaGTGTTCAGTAGTTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWHWDPG*CSVVGH Trigger: ATGACCAACTACTGAACAGCAACCTGGATCCCAGTG...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATAAGAAGAGGATATCATaGCCTGTCTCCAACAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNKKRIS*PVSNRV Trigger: GACCCTGTTGGAGACAGGCCATGATATCCTCTTCTT...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR TCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATAGATGCACCAGTCTCTaGTGTTGTCCATCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNRCTSL*CCPSKN Trigger: ATTCTTGGATGGACAACATCAGAGACTGGTGCATCT...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR GCA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGCACTTTCCCTTTAAGTaGTGGTATCTGGGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWHFPFK*WYLGSL Trigger: CAAGGATCCCAGATACCAGCACTTAAAGGGAAAGTG...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR GCA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATTGGGTCTTCTGCTTCTaGTGGAATTTCTCTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNWVFCF*WNFSSF Trigger: GAAACTAGAGAAATTCCAGCAGAAGCAGAAGACCCA...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS GCA 90 bp | GCTGGAGGCAGCACGGCGCTCCTGCAGCCGCTGAGCCTGCCGCTGTaGCTCACTTCGCTTGGCCTGCAGCTTGCCCAACTCCCGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGGSTALLQPLSLPL*LTSLGLQLAQLPGW Trigger: CCAGCCCGGGAGTTGGGCAAGCTGCAGGCCAAGCGAAGTGAGGCACAGCGGCAGGCTCAGCGGCTGCAGGAGCGCCGTGCTGCCTCCAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 90 bp | GATGGAGCAGCGGTCAGAAGCCACAGCTACAGCGCAGCCCTGCGGTaGAGGAGCACCCAGGGCGAGGACAGCCACCACGCCCGCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGAAVRSHSYSAALR*RSTQGEDSHHARTG Trigger: GCCAGTGCGGGCGTGGTGGCTGTCCTCGCCCTGGGTGCTCCTGCACCGCAGGGCTGCGCTGTAGCTGTGGCTTCTGACCGCTGCTCCATC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 90 bp | GCCGCTGAGCCTGCCGCTGTGCCTCACTTCGCTTGGCCTGCAGCTTaGCCAACTCCCGGGCTGGGTCCACTAGCCCCTGCAGCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAEPAAVPHFAWPAA*PTPGLGPLAPAAAG Trigger: ACCTGCAGCTGCAGGGGCTAGTGGACCCAGCCCGGGAGTTGGGCAAGCTGCAGGCCAAGCGAAGTGAGGCACAGCGGCAGGCTCAGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 90 bp | TTGCCCAACTCCCGGGCTGGGTCCACTAGCCCCTGCAGCTGCAGGTaGATGGAGCAGCGGTCAGAAGCCACAGCTACAGCGCAGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPNSRAGSTSPCSCR*MEQRSEATATAQPC Trigger: GCAGGGCTGCGCTGTAGCTGTGGCTTCTGACCGCTGCTCCATCCACCTGCAGCTGCAGGGGCTAGTGGACCCAGCCCGGGAGTTGGGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 90 bp | AGCCACCACGCCCGCACTGGCCAGAGCCTGCACGTAGCCCGACACTaGCGAGGCCAAGGCACCTGTGGCCTCATCGGCTACTTCCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SHHARTGQSLHVARH*RGQGTCGLIGYFQE Trigger: TTCTTGGAAGTAGCCGATGAGGCCACAGGTGCCTTGGCCTCGGCAGTGTCGGGCTACGTGCAGGCTCTGGCCAGTGCGGGCGTGGTGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 90 bp | TGCAGCTTGCCCAACTCCCGGGCTGGGTCCACTAGCCCCTGCAGCTaGAGGTGGATGGAGCAGCGGTCAGAAGCCACAGCTACAGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLPNSRAGSTSPCS*RWMEQRSEATATAQ Trigger: CTGCGCTGTAGCTGTGGCTTCTGACCGCTGCTCCATCCACCTGCAGCTGCAGGGGCTAGTGGACCCAGCCCGGGAGTTGGGCAAGCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 90 bp | GGGCCTCAGGCAGTATACGGAGGTCACCCCGGGTCACAGCAGCACTaGCAGCCTGAGCCATCTCCCCACAGCGCACGTACCATTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPQAVYGGHPGSQQH*QPEPSPHSARTIVA Trigger: GGCCACAATGGTACGTGCGCTGTGGGGAGATGGCTCAGGCTGCCAGTGCTGCTGTGACCCGGGGTGACCTCCGTATACTGCCTGAGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 90 bp | CCAGAGCCTGCACGTAGCCCGACACTGCCGAGGCCAAGGCACCTGTaGCCTCATCGGCTACTTCCAAGAAACAGTCGGGCCTGGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PEPARSPTLPRPRHL*PHRLLPRNSRAWCG Trigger: CCCGCACCAGGCCCGACTGTTTCTTGGAAGTAGCCGATGAGGCCACAGGTGCCTTGGCCTCGGCAGTGTCGGGCTACGTGCAGGCTCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 90 bp | CTTCATCTGCCTCCTGGACCTCAAGGGGCACCTTTGCTGAGTAGCTaGAGGCAGCACGGCGCTCCTGCAGCCGCTGAGCCTGCCGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLPPGPQGAPLLSS*RQHGAPAAAEPAAV Trigger: CACAGCGGCAGGCTCAGCGGCTGCAGGAGCGCCGTGCTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGGTCCAGGAGGCAGATGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS TCA 90 bp | CACCTTCGCTTCATCTGCCTCCTGGACCTCAAGGGGCACCTTTGCTaGGTAGCTGGAGGCAGCACGGCGCTCCTGCAGCCGCTGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLRFICLLDLKGHLC*VAGGSTALLQPLSL Trigger: CAGGCTCAGCGGCTGCAGGAGCGCCGTGCTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGGTCCAGGAGGCAGATGAAGCGAAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173584.8 |
||
| CDS GCA 90 bp | TTGGCCTGCAGCTTGCCCAACTCCCGGGCTGGGTCCACTAGCCCCTaGAGCTGCAGGTGGATGGAGCAGCGGTCAGAAGCCACAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: LACSLPNSRAGSTSP*SCRWMEQRSEATAT Trigger: TGTAGCTGTGGCTTCTGACCGCTGCTCCATCCACCTGCAGCTGCAGGGGCTAGTGGACCCAGCCCGGGAGTTGGGCAAGCTGCAGGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS TCA 90 bp | CAACTTCGCTTCATCTGCCTCCTGGACCTCAAGGGGCACCTTTGCTaGGTAGCTGGAGGCAGCACGGCGCTCCTGCAGCCGCTGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLRFICLLDLKGHLC*VAGGSTALLQPLSL Trigger: CAGGCTCAGCGGCTGCAGGAGCGCCGTGCTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGGTCCAGGAGGCAGATGAAGCGAAGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS GCA 90 bp | GTCAGGGGACACTCCAAACTCCCGTGCTGCCTTCTCTCGGGCCTCTaGTTCAGTGCGTCCGCTTACCCAGTACCGCCCATCAGGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VRGHSKLPCCLLSGL*FSASAYPVPPIRVL Trigger: GAGGACCCTGATGGGCGGTACTGGGTAAGCGGACGCACTGAAGCAGAGGCCCGAGAGAAGGCAGCACGGGAGTTTGGAGTGTCCCCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 90 bp | CCTGGGTGGCAATGCCTGCATGGTCACAGCCTGGGTTCCATAGGGTaGTCTCCCCACGCATGCGGTGCCATCGAGTCAGGGAGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGWQCLHGHSLGSIG*SPHACGAIESGSPG Trigger: TCCAGGACTCCCTGACTCGATGGCACCGCATGCGTGGGGAGACCACCCTATGGAACCCAGGCTGTGACCATGCAGGCATTGCCACCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS TCA 90 bp | GGGCAGGCCCAGGAAAGGTGGAGGCACATTGATGAGGGCCCCCTTTaGGTCCATGATGCTAATGGCCTCGAGCCTGTGTCGCTGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GQAQERWRHIDEGPL*VHDANGLEPVSLPN Trigger: GTTGGGCAGCGACACAGGCTCGAGGCCATTAGCATCATGGACTCAAAGGGGGCCCTCATCAATGTGCCTCCACCTTTCCTGGGCCTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS TCA 90 bp | GGCAGTATACGGAGGTCACCCCGGGTCACAGCAGCACTGGCAGCCTaGGCCATCTCCCCACAGCGCACGTACCATTGTGGCCTTAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSIRRSPRVTAALAA*AISPQRTYHCGLNR Trigger: TCTGTTAAGGCCACAATGGTACGTGCGCTGTGGGGAGATGGCTCAGGCTGCCAGTGCTGCTGTGACCCGGGGTGACCTCCGTATACTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 90 bp | GGAAAGGCAGCAGTAAGGCTGTCACAGCAGCTAAGTCAGCCAGAGTaGGGGCATCTCCAGCCAGGTAGGTGTGCAGCCGCAGCCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GKAAVRLSQQLSQPE*GHLQPGRCAAAASP Trigger: AGGACTGGCTGCGGCTGCACACCTACCTGGCTGGAGATGCCCCCACTCTGGCTGACTTAGCTGCTGTGACAGCCTTACTGCTGCCTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087315.14 ENSMUST00000172570.2 ENSMUST00000173584.8 ENSMUST00000174260.8 |
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| CDS GCA 90 bp | CCCGCTCTTTCCAGAGCTTCTTTTCCACCACCACCTGGGTGGCAATaGCTGCATGGTCACAGCCTGGGTTCCATAGGGTGGTCTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PALSRASFPPPPGWQ*LHGHSLGSIGWSPH Trigger: GTGGGGAGACCACCCTATGGAACCCAGGCTGTGACCATGCAGGCATTGCCACCCAGGTGGTGGTGGAAAAGAAGCTCTGGAAAGAGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | GCTTTCCACTTCCAGACCTCCTCAAGAAAGGCCTCGCGGCCCAGCTaGTGCCGGTTCAGACCCCGCTCTTTCCAGAGCTTCTTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AFHFQTSSRKASRPS*CRFRPRSFQSFFST Trigger: GGTGGAAAAGAAGCTCTGGAAAGAGCGGGGTCTGAACCGGCACCAGCTGGGCCGCGAGGCCTTTCTTGAGGAGGTCTGGAAGTGGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | ATCTGGGATCCTTGGGGTGCACAGCTACAGCCACGTCTCCCAGCATaGTCTCAATCCGGGTTGTTGCCACCACCACCTCCTCGTCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IWDPWGAQLQPRLPA*SQSGLLPPPPPRRC Trigger: ACAGCGACGAGGAGGTGGTGGTGGCAACAACCCGGATTGAGACCATGCTGGGAGACGTGGCTGTAGCTGTGCACCCCAAGGATCCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | ACACAGAGGCTAGCAGGCGCTTTTGGTGTCCGCCGGGGCAGTCTCTaGAATAGCTCCTCTGTGACAAAGGGCATGAAGGGCGAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQRLAGAFGVRRGSL*NSSSVTKGMKGESS Trigger: GCTGCTCTCGCCCTTCATGCCCTTTGTCACAGAGGAGCTATTCCAGAGACTGCCCCGGCGGACACCAAAAGCGCCTGCTAGCCTCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 90 bp | CCCGAGTACAGGGCCACTTCTCCCAGCACAGCCCGGAATTCCGGTTaGCGGACACAAGTGTTAAACCAGCGAGTCACATTGCCCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PEYRATSPSTARNSG*RTQVLNQRVTLPQI Trigger: GATCTGGGGCAATGTGACTCGCTGGTTTAACACTTGTGTCCGGCAACCGGAATTCCGGGCTGTGCTGGGAGAAGTGGCCCTGTACTCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087315.14 ENSMUST00000172570.2 ENSMUST00000173584.8 ENSMUST00000174260.8 |
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| CDS CCA 90 bp | CGGTTCAGACCCCGCTCTTTCCAGAGCTTCTTTTCCACCACCACCTaGGTGGCAATGCCTGCATGGTCACAGCCTGGGTTCCATAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RFRPRSFQSFFSTTT*VAMPAWSQPGFHRV Trigger: CACCCTATGGAACCCAGGCTGTGACCATGCAGGCATTGCCACCCAGGTGGTGGTGGAAAAGAAGCTCTGGAAAGAGCGGGGTCTGAACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS TCA 90 bp | TGCGGGTCAGGTTGTAGTCAGCACGCAGGGAGCGCACAGCTCGAGTaGTGCTCAGAGCTAGTTCAAGAGCAGCTTCAGCTTCAGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CGSGCSQHAGSAQLE*CSELVQEQLQLQGP Trigger: AGGACCCTGAAGCTGAAGCTGCTCTTGAACTAGCTCTGAGCATCACTCGAGCTGTGCGCTCCCTGCGTGCTGACTACAACCTGACCCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | TCAGACCCCGCTCTTTCCAGAGCTTCTTTTCCACCACCACCTGGGTaGCAATGCCTGCATGGTCACAGCCTGGGTTCCATAGGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDPALSRASFPPPPG*QCLHGHSLGSIGWS Trigger: AGACCACCCTATGGAACCCAGGCTGTGACCATGCAGGCATTGCCACCCAGGTGGTGGTGGAAAAGAAGCTCTGGAAAGAGCGGGGTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS-3UTR CAA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGCGCTTGGCCTGCAGCTaGCCCAACTCCCGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWRLACS*PNSRAG Trigger: CCCAGCCCGGGAGTTGGGCAAGCTGCAGGCCAAGCG...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS TCA 90 bp | ATGCACCAGTCTCTGATGTTGTCCATCCAAGAATGCCACGTCCGTTaGTGGGCCTCAGGCAGTATACGGAGGTCACCCCGGGTCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MHQSLMLSIQECHVR*WASGSIRRSPRVTA Trigger: TGCTGTGACCCGGGGTGACCTCCGTATACTGCCTGAGGCCCATCAACGGACGTGGCATTCTTGGATGGACAACATCAGAGACTGGTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGGAGTCCTGGATGGCGTaGGTGAGTGCGTGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMESWMA*VSAWPR Trigger: CCTGGGCCACGCACTCACCAACGCCATCCAGGACTC...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS GCA 90 bp | CCCCAAACTCCACCTTCTCCTTGTAGCCAGGCACAGGAAGCAGGGTaGGGCCTGTCAGCTCCTTCTTATCCACCTCAATGTCAGAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: PQTPPSPCSQAQEAG*GLSAPSYPPQCQKW Trigger: CCATTTCTGACATTGAGGTGGATAAGAAGGAGCTGACAGGCCGCACCCTGCTTCCTGTGCCTGGCTACAAGGAGAAGGTGGAGTTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | GGTGGACGACACACTTTCCCTTTAAGTGCTGGTATCTGGGATCCTTaGGGTGCACAGCTACAGCCACGTCTCCCAGCATGGTCTCAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GGRHTFPLSAGIWDP*GAQLQPRLPAWSQS Trigger: GGATTGAGACCATGCTGGGAGACGTGGCTGTAGCTGTGCACCCCAAGGATCCCAGATACCAGCACTTAAAGGGAAAGTGTGTCGTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS-3UTR CAA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCTCAGAGCCTGGCTGTaGAGTGACAGACCTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMLRAWL*SDRPGP Trigger: GGGGCCAGGTCTGTCACTCAACAGCCAGGCTCTGAG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CAA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCGCCCGTACTCTGGCTaGAAGAAGCCCTGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNRPYSG*KKPCRS Trigger: GGAGCGGCAGGGCTTCTTCAAGCCAGAGTACGGGCG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CAA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAAGGGTGCAGGACCAGTaGACCAGGCGGGTGCTACGG | + |
|
Preference number: 5 (lower is better) Translates to: NILLLPSLLMEHWGLRVGRVQDQ*TRRVLR Trigger: CCGTAGCACCCGCCTGGTCAACTGGTCCTGCACCCT...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS CCA 90 bp | ACAAGAATGGGTGGACGACACACTTTCCCTTTAAGTGCTGGTATCTaGGATCCTTGGGGTGCACAGCTACAGCCACGTCTCCCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: TRMGGRHTFPLSAGI*DPWGAQLQPRLPAW Trigger: CCATGCTGGGAGACGTGGCTGTAGCTGTGCACCCCAAGGATCCCAGATACCAGCACTTAAAGGGAAAGTGTGTCGTCCACCCATTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | CGGCACCTGTGCCAAACTCCATGTCTACAAAGTCATCGAAGACGATaGGAAGGCTCCGGGACAAGAATGGGTGGACGACACACTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RHLCQTPCLQSHRRR*EGSGTRMGGRHTFP Trigger: AGGGAAAGTGTGTCGTCCACCCATTCTTGTCCCGGAGCCTTCCCATCGTCTTCGATGACTTTGTAGACATGGAGTTTGGCACAGGTGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS-3UTR CAA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAACCAGCGAGTCACATaGCCCCAGATCCGGCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWNQRVT*PQIRRA Trigger: TGCCCGCCGGATCTGGGGCAATGTGACTCGCTGGTT...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CAA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGTGTGCCTCACTTCGCTaGGCCTGCAGCTTGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMCASLR*ACSLPN Trigger: GTTGGGCAAGCTGCAGGCCAAGCGAAGTGAGGCACA...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CAA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCCTCAAGGGGCACCTTaGCTGAGTAGCTGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMPQGAP*LSSWRQ Trigger: CTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS TCA 90 bp | CCGCGCAGGGCAAACTTGGTAGCATTCCAGAGTTTGTTGCAGAAGTaGCGGTACCCCAGGATCCTGTTCACATCCAGGTTGATGTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PRRANLVAFQSLLQK*RYPRILFTSRLMSR Trigger: TCGAGACATCAACCTGGATGTGAACAGGATCCTGGGGTACCGTCACTTCTGCAACAAACTCTGGAATGCTACCAAGTTTGCCCTGCGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087315.14 ENSMUST00000173142.2 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | CTGGAAAGTCGGCCTTCTGTCCTTCTTTGGCTTTCTCCACCTCACTaGGATCCAGGTTGCTGTTCAGTAGTTGGTCATAGAGGCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LESRPSVLLWLSPPH*DPGCCSVVGHRGPA Trigger: TGCAGGGCCTCTATGACCAACTACTGAACAGCAACCTGGATCCCAGTGAGGTGGAGAAAGCCAAAGAAGGACAGAAGGCCGACTTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | CACACTCGGGAATCCCTGCTGGAAAGTCGGCCTTCTGTCCTTCTTTaGCTTTCTCCACCTCACTGGGATCCAGGTTGCTGTTCAGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HTRESLLESRPSVLL*LSPPHWDPGCCSVV Trigger: AACTACTGAACAGCAACCTGGATCCCAGTGAGGTGGAGAAAGCCAAAGAAGGACAGAAGGCCGACTTTCCAGCAGGGATTCCCGAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087315.14 ENSMUST00000173142.2 ENSMUST00000173584.8 |
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| CDS-3UTR CAA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGTGGTCTCAATCCGGGTaGTTGCCACCACCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMWSQSG*LPPPPP Trigger: AGGAGGTGGTGGTGGCAACAACCCGGATTGAGACCA...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CAA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGGCACCACCATGGGGTaGTCCTTGACTCCACGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NILLLPSLLMEHWGLRVGGTTMG*SLTPRN Trigger: GTTCCGTGGAGTCAAGGACAACCCCATGGTGGTGCC...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CAA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCTTCAGGCTTGGAGGTaGCTGAGGGCACAAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMLQAWR*LRAQSP Trigger: AGGGCTTTGTGCCCTCAGCAACCTCCAAGCCTGAAG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CAA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGATCGTGCCCTTCAGGCTaGGAGGTTGCTGAGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: NILLLPSLLMEHWGLRVGSCPSG*EVAEGT Trigger: TGTGCCCTCAGCAACCTCCAAGCCTGAAGGGCACGA...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS TCA 90 bp | TGTTGCAGAAGTGACGGTACCCCAGGATCCTGTTCACATCCAGGTTaGTGTCTCGACCTTGGGATGTGTAGGCACAGAGTCCAAAGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: CCRSDGTPGSCSHPG*CLDLGMCRHRVQSV Trigger: TACGCTTTGGACTCTGTGCCTACACATCCCAAGGTCGAGACATCAACCTGGATGTGAACAGGATCCTGGGGTACCGTCACTTCTGCAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087315.14 ENSMUST00000173142.2 ENSMUST00000173584.8 |
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| CDS GCA 90 bp | GGTTTTGGTTTCTTCTCTCCGTGCGGGGGCTGCTGCTGGGTCTTCTaGTTCTGCTGGAATTTCTCTAGTTTCTCCCGTTTCTTTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GFGFFSPCGGCCWVF*FCWNFSSFSRFFAS Trigger: AGAGGCAAAGAAACGGGAGAAACTAGAGAAATTCCAGCAGAAGCAGAAGACCCAGCAGCAGCCCCCGCACGGAGAGAAGAAACCAAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS-3UTR CAA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGATCTCAATCCGGGTTGTaGCCACCACCACCTCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: NILLLPSLLMEHWGLRVGSQSGL*PPPPPR Trigger: ACGAGGAGGTGGTGGTGGCAACAACCCGGATTGAGA...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CAA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATTGGTATCTGGGATCCTaGGGGTGCACAGCTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNWYLGS*GCTATA Trigger: GGCTGTAGCTGTGCACCCCAAGGATCCCAGATACCA...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS-3UTR CAA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCTCCGCCTCTGTCTGTaGCAACTTCGCTTCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMLRLCL*QLRFIC Trigger: GCAGATGAAGCGAAGTTGCAACAGACAGAGGCGGAG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
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| CDS GCA 90 bp | CCTTCTGTCCTTCTTTGGCTTTCTCCACCTCACTGGGATCCAGGTTaGTGTTCAGTAGTTGGTCATAGAGGCCCTGCAAGGAAACTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSVLLWLSPPHWDPG*CSVVGHRGPARKLH Trigger: ATGGAGTTTCCTTGCAGGGCCTCTATGACCAACTACTGAACAGCAACCTGGATCCCAGTGAGGTGGAGAAAGCCAAAGAAGGACAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | TTCTTCTCTGGTTTTGGTTTCTTCTCTCCGTGCGGGGGCTGCTGCTaGGTCTTCTGCTTCTGCTGGAATTTCTCTAGTTTCTCCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFSGFGFFSPCGGCC*VFCFCWNFSSFSRF Trigger: GAAACGGGAGAAACTAGAGAAATTCCAGCAGAAGCAGAAGACCCAGCAGCAGCCCCCGCACGGAGAGAAGAAACCAAAACCAGAGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 90 bp | ACAAAGTCATCGAAGACGATGGGAAGGCTCCGGGACAAGAATGGGTaGACGACACACTTTCCCTTTAAGTGCTGGTATCTGGGATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TKSSKTMGRLRDKNG*TTHFPFKCWYLGSL Trigger: CAAGGATCCCAGATACCAGCACTTAAAGGGAAAGTGTGTCGTCCACCCATTCTTGTCCCGGAGCCTTCCCATCGTCTTCGATGACTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS-3UTR CAA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGAATGCCACGTCCGTaGATGGGCCTCAGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWRMPRP*MGLRQY Trigger: ATACTGCCTGAGGCCCATCAACGGACGTGGCATTCT...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CAA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCCGCGCAGGGCAAACTaGGTAGCATTCCAGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNPRRAN*VAFQSL Trigger: CAAACTCTGGAATGCTACCAAGTTTGCCCTGCGCGG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CAA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCACCAGTCTCTGATGTaGTCCATCCAAGAATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMHQSLM*SIQECH Trigger: GTGGCATTCTTGGATGGACAACATCAGAGACTGGTG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CAA 90 bp | AAATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAGGGGGTCGATGACATaGCCAAGAGACTTGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KYFIAAIPVDGTLGAEGWRGSMT*PRDLLI Trigger: GATGAGCAAGTCTCTTGGCAATGTCATCGACCCCCT...CCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CAA 90 bp | ATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATGCAACACATCCTCATCTaGCTGAAGGCTGATCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPSLLMEHWGLRVGMQHILI*LKADLV Trigger: GACAAGATCAGCCTTCAGCAAGATGAGGATGTGTTG...CATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CAA 90 bp | AATATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGATCACTGGGATCCAGGTaGCTGTTCAGTAGTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NILLLPSLLMEHWGLRVGSLGSR*LFSSWS Trigger: TGACCAACTACTGAACAGCAACCTGGATCCCAGTGA...TCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CAA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATCTGTTCACATCCAGGTaGATGTCTCGACCTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNLFTSR*MSRPWD Trigger: ATCCCAAGGTCGAGACATCAACCTGGATGTGAACAG...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CAA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATAACCTCATAGTCATTTaGGTCATGTGCCGGGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNNLIVI*VMCRGD Trigger: ATCACCCCGGCACATGACCAAAATGACTATGAGGTT...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS-3UTR CAA 90 bp | TATTTTATTGCTGCCATCCCTGTTGATGGAACACTGGGGGCTGAGGGTTGGAATTTCTTTGCCTCTTTTTaGAGCTGCGCGGGTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YFIAAIPVDGTLGAEGWNFFASF*SCAGVF Trigger: AAAAACACCCGCGCAGCTCAAAAAAGAGGCAAAGAA...ATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGCAGCAATAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS GCA 72 bp | GCGGTCAGAAGCCACAGCTACAGCGCAGCCCTGCGGTaGAGGAGCACCCAGGGCGAGGACAGCCACCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: AVRSHSYSAALR*RSTQGEDSHHA Trigger: GGCGTGGTGGCTGTCCTCGCCCTGGGTGCTCCTGCACCGCAGGGCTGCGCTGTAGCTGTGGCTTCTGACCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 72 bp | GCCCGCACTGGCCAGAGCCTGCACGTAGCCCGACACTaGCGAGGCCAAGGCACCTGTGGCCTCATCGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: ARTGQSLHVARH*RGQGTCGLIGY Trigger: GTAGCCGATGAGGCCACAGGTGCCTTGGCCTCGGCAGTGTCGGGCTACGTGCAGGCTCTGGCCAGTGCGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS TCA 72 bp | CACCAGGCTCTCGTGCCCTTCAGGCTTGGAGGTTGCTaGGGGCACAAAGCCCTTCCCAAGGCCGCGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HQALVPFRLGGC*GHKALPKAAQG Trigger: GCCCTGCGCGGCCTTGGGAAGGGCTTTGTGCCCTCAGCAACCTCCAAGCCTGAAGGGCACGAGAGCCTGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 72 bp | CCTCCTGGACCTCAAGGGGCACCTTTGCTGAGTAGCTaGAGGCAGCACGGCGCTCCTGCAGCCGCTGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPGPQGAPLLSS*RQHGAPAAAEP Trigger: AGGCTCAGCGGCTGCAGGAGCGCCGTGCTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGGTCCAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 72 bp | GTCCTTGACTCCACGGAACAGGCCCCGCTCCTTCAGTaGCGCCAGCACAGCCTTCCTGGCCTCAAACCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLDSTEQAPLLQ*RQHSLPGLKPG Trigger: CCCAGGTTTGAGGCCAGGAAGGCTGTGCTGGCGGCACTGAAGGAGCGGGGCCTGTTCCGTGGAGTCAAGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 72 bp | AGGCGGCTGCGGATCCAGCGGTCCACCAGGCTCTCGTaGCCTTCAGGCTTGGAGGTTGCTGAGGGCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RRLRIQRSTRLS*PSGLEVAEGTK Trigger: CTTTGTGCCCTCAGCAACCTCCAAGCCTGAAGGGCACGAGAGCCTGGTGGACCGCTGGATCCGCAGCCGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 72 bp | GCAGTATACGGAGGTCACCCCGGGTCACAGCAGCACTaGCAGCCTGAGCCATCTCCCCACAGCGCACGTACC | + |
|
Preference number: 6 (lower is better) Translates to: AVYGGHPGSQQH*QPEPSPHSART Trigger: GGTACGTGCGCTGTGGGGAGATGGCTCAGGCTGCCAGTGCTGCTGTGACCCGGGGTGACCTCCGTATACTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS TCA 72 bp | TTCATCTGCCTCCTGGACCTCAAGGGGCACCTTTGCTaGGTAGCTGGAGGCAGCACGGCGCTCCTGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FICLLDLKGHLC*VAGGSTALLQP Trigger: CGGCTGCAGGAGCGCCGTGCTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGGTCCAGGAGGCAGATGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 72 bp | GCAGCCGCAGCCAGTCCTCCAAGGGGTTCAAGGCCTTaGCCAGGGCCCCAAGGGCAGCAGAAACAATCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: AAAASPPRGSRP*PGPQGQQKQSG Trigger: ACCAGATTGTTTCTGCTGCCCTTGGGGCCCTGGGCAAGGCCTTGAACCCCTTGGAGGACTGGCTGCGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172570.2 |
||
| CDS CCA 72 bp | GCACGTAGCCCGACACTGCCGAGGCCAAGGCACCTGTaGCCTCATCGGCTACTTCCAAGAAACAGTCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARSPTLPRPRHL*PHRLLPRNSRA Trigger: GGCCCGACTGTTTCTTGGAAGTAGCCGATGAGGCCACAGGTGCCTTGGCCTCGGCAGTGTCGGGCTACGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CAA 90 bp | CACACACCTTCGCTTCATCTGCCTCCTGGACCTCAAGGGGCACCTTaGCTGAGTAGCTGGAGGCAGCACGGCGCTCCTGCAGCCGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HTPSLHLPPGPQGAP*LSSWRQHGAPAAAE Trigger: CTCAGCGGCTGCAGGAGCGCCGTGCTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGGTCCAGGAGGCAGATGAAGCGAAGGTGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173584.8 |
||
| CDS CAA 90 bp | GTTGCAACTTCGCTTCATCTGCCTCCTGGACCTCAAGGGGCACCTTaGCTGAGTAGCTGGAGGCAGCACGGCGCTCCTGCAGCCGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VATSLHLPPGPQGAP*LSSWRQHGAPAAAE Trigger: CTCAGCGGCTGCAGGAGCGCCGTGCTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGGTCCAGGAGGCAGATGAAGCGAAGTTGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087315.14 |
||
| CDS GCA 72 bp | CACTCCAAACTCCCGTGCTGCCTTCTCTCGGGCCTCTaGTTCAGTGCGTCCGCTTACCCAGTACCGCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: HSKLPCCLLSGL*FSASAYPVPPI Trigger: GATGGGCGGTACTGGGTAAGCGGACGCACTGAAGCAGAGGCCCGAGAGAAGGCAGCACGGGAGTTTGGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 72 bp | TTCCAGACCTCCTCAAGAAAGGCCTCGCGGCCCAGCTaGTGCCGGTTCAGACCCCGCTCTTTCCAGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FQTSSRKASRPS*CRFRPRSFQSF Trigger: GAAGCTCTGGAAAGAGCGGGGTCTGAACCGGCACCAGCTGGGCCGCGAGGCCTTTCTTGAGGAGGTCTGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CAA 72 bp | TCGCTTCATCTGCCTCCTGGACCTCAAGGGGCACCTTaGCTGAGTAGCTGGAGGCAGCACGGCGCTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLHLPPGPQGAP*LSSWRQHGAPA Trigger: TGCAGGAGCGCCGTGCTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGGTCCAGGAGGCAGATGAAGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CAA 90 bp | GGTGCACAGCTACAGCCACGTCTCCCAGCATGGTCTCAATCCGGGTaGTTGCCACCACCACCTCCTCGTCGCTGTCTGAGCCTTGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: GAQLQPRLPAWSQSG*LPPPPPRRCLSLGP Trigger: AGGTCCAAGGCTCAGACAGCGACGAGGAGGTGGTGGTGGCAACAACCCGGATTGAGACCATGCTGGGAGACGTGGCTGTAGCTGTGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS TCA 72 bp | TGGCCGGGAAATCGTAAGCCTGGAAGCCTTCATTGCTaGGCCTCACGGCCTCAGTTAGGCGGCTGCGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: WPGNRKPGSLHC*ASRPQLGGCGS Trigger: GGATCCGCAGCCGCCTAACTGAGGCCGTGAGGCTCAGCAATGAAGGCTTCCAGGCTTACGATTTCCCGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 72 bp | GCTGATCTTGTCAGGGGACACTCCAAACTCCCGTGCTaGCTTCTCTCGGGCCTCTGCTTCAGTGCGTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ADLVRGHSKLPC*LLSGLCFSASA Trigger: AGCGGACGCACTGAAGCAGAGGCCCGAGAGAAGGCAGCACGGGAGTTTGGAGTGTCCCCTGACAAGATCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 72 bp | CCTCATCGGCTACTTCCAAGAAACAGTCGGGCCTGGTaGGGGTCAGGTTGTAGTCAGCACGCAGGGAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PHRLLPRNSRAW*GSGCSQHAGSA Trigger: TGCGCTCCCTGCGTGCTGACTACAACCTGACCCGCACCAGGCCCGACTGTTTCTTGGAAGTAGCCGATGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 72 bp | CCTTGGGGTGCACAGCTACAGCCACGTCTCCCAGCATaGTCTCAATCCGGGTTGTTGCCACCACCACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PWGAQLQPRLPA*SQSGLLPPPPP Trigger: AGGAGGTGGTGGTGGCAACAACCCGGATTGAGACCATGCTGGGAGACGTGGCTGTAGCTGTGCACCCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CCA 72 bp | TGGCCTCATCGGCTACTTCCAAGAAACAGTCGGGCCTaGTGCGGGTCAGGTTGTAGTCAGCACGCAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WPHRLLPRNSRA*CGSGCSQHAGS Trigger: GCTCCCTGCGTGCTGACTACAACCTGACCCGCACCAGGCCCGACTGTTTCTTGGAAGTAGCCGATGAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CAA 72 bp | CAGCCACGTCTCCCAGCATGGTCTCAATCCGGGTTGTaGCCACCACCACCTCCTCGTCGCTGTCTGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QPRLPAWSQSGL*PPPPPRRCLSL Trigger: AAGGCTCAGACAGCGACGAGGAGGTGGTGGTGGCAACAACCCGGATTGAGACCATGCTGGGAGACGTGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CAA 72 bp | CTACAGCCACGTCTCCCAGCATGGTCTCAATCCGGGTaGTTGCCACCACCACCTCCTCGTCGCTGTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQPRLPAWSQSG*LPPPPPRRCLS Trigger: GCTCAGACAGCGACGAGGAGGTGGTGGTGGCAACAACCCGGATTGAGACCATGCTGGGAGACGTGGCTGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CAA 90 bp | GCACAGCTACAGCCACGTCTCCCAGCATGGTCTCAATCCGGGTTGTaGCCACCACCACCTCCTCGTCGCTGTCTGAGCCTTGGACCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: AQLQPRLPAWSQSGL*PPPPPRRCLSLGPC Trigger: ACAAGGTCCAAGGCTCAGACAGCGACGAGGAGGTGGTGGTGGCAACAACCCGGATTGAGACCATGCTGGGAGACGTGGCTGTAGCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS GCA 72 bp | AAGGCTGATCTTGTCAGGGGACACTCCAAACTCCCGTaGTGCCTTCTCTCGGGCCTCTGCTTCAGTGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KADLVRGHSKLP*CLLSGLCFSAS Trigger: GGACGCACTGAAGCAGAGGCCCGAGAGAAGGCAGCACGGGAGTTTGGAGTGTCCCCTGACAAGATCAGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | GGGCATGGCGCCACTTACATCTTTCTTCTCCCCCGGTaGGGTAGGGAGGTCATAGGTAATGACCCCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GHGATYIFLLPR*GREVIGNDPRV Trigger: GACCCTGGGGTCATTACCTATGACCTCCCTACCCCACCGGGGGAGAAGAAAGATGTAAGTGGCGCCATGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | CCCCGCTCTTTCCAGAGCTTCTTTTCCACCACCACCTaGGTGGCAATGCCTGCATGGTCACAGCCTGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PRSFQSFFSTTT*VAMPAWSQPGF Trigger: GAACCCAGGCTGTGACCATGCAGGCATTGCCACCCAGGTGGTGGTGGAAAAGAAGCTCTGGAAAGAGCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | CTAGCAGGCGCTTTTGGTGTCCGCCGGGGCAGTCTCTaGAATAGCTCCTCTGTGACAAAGGGCATGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LAGAFGVRRGSL*NSSSVTKGMKG Trigger: GCCCTTCATGCCCTTTGTCACAGAGGAGCTATTCCAGAGACTGCCCCGGCGGACACCAAAAGCGCCTGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CAA 72 bp | GGTTGCCGGACACAAGTGTTAAACCAGCGAGTCACATaGCCCCAGATCCGGCGGGCAGAAGGGTCCAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: GCRTQVLNQRVT*PQIRRAEGSRT Trigger: CGTTCTGGACCCTTCTGCCCGCCGGATCTGGGGCAATGTGACTCGCTGGTTTAACACTTGTGTCCGGCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087315.14 ENSMUST00000172570.2 ENSMUST00000173584.8 ENSMUST00000174260.8 |
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| CDS CAA 90 bp | CCCCGAGTACAGGGCCACTTCTCCCAGCACAGCCCGGAATTCCGGTaGCCGGACACAAGTGTTAAACCAGCGAGTCACATTGCCCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PRVQGHFSQHSPEFR*PDTSVKPASHIAPD Trigger: ATCTGGGGCAATGTGACTCGCTGGTTTAACACTTGTGTCCGGCAACCGGAATTCCGGGCTGTGCTGGGAGAAGTGGCCCTGTACTCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087315.14 ENSMUST00000172570.2 ENSMUST00000173584.8 ENSMUST00000174260.8 |
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| CDS CAA 90 bp | CAGCGCACGTACCATTGTGGCCTTAACAGAGGCTCCACCACATCCTaGGAGCGGTTGCAAAGCGGCACCACCATGGGGTTGTCCTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: QRTYHCGLNRGSTTS*ERLQSGTTMGLSLT Trigger: AGTCAAGGACAACCCCATGGTGGTGCCGCTTTGCAACCGCTCCAAGGATGTGGTGGAGCCTCTGTTAAGGCCACAATGGTACGTGCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CAA 90 bp | GATGCACCAGTCTCTGATGTTGTCCATCCAAGAATGCCACGTCCGTaGATGGGCCTCAGGCAGTATACGGAGGTCACCCCGGGTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: DAPVSDVVHPRMPRP*MGLRQYTEVTPGHS Trigger: GCTGTGACCCGGGGTGACCTCCGTATACTGCCTGAGGCCCATCAACGGACGTGGCATTCTTGGATGGACAACATCAGAGACTGGTGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CAA 90 bp | CCTGGTCCACTCCATTCAGCACAGGTTTTAGACACTCCTTGGAGGTaGCTGAGGGCACAAAGCCCTTCCCAAGGCCGCGCAGGGCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: PGPLHSAQVLDTPWR*LRAQSPSQGRAGQT Trigger: AGTTTGCCCTGCGCGGCCTTGGGAAGGGCTTTGTGCCCTCAGCAACCTCCAAGGAGTGTCTAAAACCTGTGCTGAATGGAGTGGACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173142.2 |
||
| CDS GCA 72 bp | TCCAGAGCTTCTTTTCCACCACCACCTGGGTGGCAATaGCTGCATGGTCACAGCCTGGGTTCCATAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRASFPPPPGWQ*LHGHSLGSIGW Trigger: CCACCCTATGGAACCCAGGCTGTGACCATGCAGGCATTGCCACCCAGGTGGTGGTGGAAAAGAAGCTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CAA 90 bp | CGGAATTCCGGTTGCCGGACACAAGTGTTAAACCAGCGAGTCACATaGCCCCAGATCCGGCGGGCAGAAGGGTCCAGAACGTATCGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RNSGCRTQVLNQRVT*PQIRRAEGSRTYRK Trigger: TTTCCGATACGTTCTGGACCCTTCTGCCCGCCGGATCTGGGGCAATGTGACTCGCTGGTTTAACACTTGTGTCCGGCAACCGGAATTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087315.14 ENSMUST00000172570.2 ENSMUST00000173584.8 ENSMUST00000174260.8 |
||
| CDS CAA 90 bp | GCTAATGGCCTCGAGCCTGTGTCGCTGCCCAACCTCATAGTCATTTaGGTCATGTGCCGGGGTGATCTTCACGGCACCTGTGCCAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: ANGLEPVSLPNLIVI*VMCRGDLHGTCAKL Trigger: GAGTTTGGCACAGGTGCCGTGAAGATCACCCCGGCACATGACCAAAATGACTATGAGGTTGGGCAGCGACACAGGCTCGAGGCCATTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CAA 90 bp | TACCATTGTGGCCTTAACAGAGGCTCCACCACATCCTTGGAGCGGTaGCAAAGCGGCACCACCATGGGGTTGTCCTTGACTCCACGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: YHCGLNRGSTTSLER*QSGTTMGLSLTPRN Trigger: GTTCCGTGGAGTCAAGGACAACCCCATGGTGGTGCCGCTTTGCAACCGCTCCAAGGATGTGGTGGAGCCTCTGTTAAGGCCACAATGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS TCA 72 bp | CAGGAAAGGTGGAGGCACATTGATGAGGGCCCCCTTTaGGTCCATGATGCTAATGGCCTCGAGCCTGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: QERWRHIDEGPL*VHDANGLEPVS Trigger: CGACACAGGCTCGAGGCCATTAGCATCATGGACTCAAAGGGGGCCCTCATCAATGTGCCTCCACCTTTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS TCA 72 bp | TCTCTGATGTTGTCCATCCAAGAATGCCACGTCCGTTaGTGGGCCTCAGGCAGTATACGGAGGTCACCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SLMLSIQECHVR*WASGSIRRSPR Trigger: CCGGGGTGACCTCCGTATACTGCCTGAGGCCCATCAACGGACGTGGCATTCTTGGATGGACAACATCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS GCA 72 bp | AGGGCCACTTCTCCCAGCACAGCCCGGAATTCCGGTTaGCGGACACAAGTGTTAAACCAGCGAGTCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: RATSPSTARNSG*RTQVLNQRVTL Trigger: CAATGTGACTCGCTGGTTTAACACTTGTGTCCGGCAACCGGAATTCCGGGCTGTGCTGGGAGAAGTGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087315.14 ENSMUST00000172570.2 ENSMUST00000173584.8 ENSMUST00000174260.8 |
||
| CDS CCA 72 bp | ACCATTGTGGCCTTAACAGAGGCTCCACCACATCCTTaGAGCGGTTGCAAAGCGGCACCACCATGGGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TIVALTEAPPHP*SGCKAAPPWGC Trigger: ACAACCCCATGGTGGTGCCGCTTTGCAACCGCTCCAAGGATGTGGTGGAGCCTCTGTTAAGGCCACAATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CAA 72 bp | CAGGGCCACTTCTCCCAGCACAGCCCGGAATTCCGGTaGCCGGACACAAGTGTTAAACCAGCGAGTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: QGHFSQHSPEFR*PDTSVKPASHI Trigger: AATGTGACTCGCTGGTTTAACACTTGTGTCCGGCAACCGGAATTCCGGGCTGTGCTGGGAGAAGTGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087315.14 ENSMUST00000172570.2 ENSMUST00000173584.8 ENSMUST00000174260.8 |
||
| CDS CAA 72 bp | CTCGAGCCTGTGTCGCTGCCCAACCTCATAGTCATTTaGGTCATGTGCCGGGGTGATCTTCACGGCACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LEPVSLPNLIVI*VMCRGDLHGTC Trigger: ACAGGTGCCGTGAAGATCACCCCGGCACATGACCAAAATGACTATGAGGTTGGGCAGCGACACAGGCTCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
||
| CDS CAA 72 bp | TACCATTGTGGCCTTAACAGAGGCTCCACCACATCCTaGGAGCGGTTGCAAAGCGGCACCACCATGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: YHCGLNRGSTTS*ERLQSGTTMGL Trigger: CAACCCCATGGTGGTGCCGCTTTGCAACCGCTCCAAGGATGTGGTGGAGCCTCTGTTAAGGCCACAATGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CAA 72 bp | GTCTCTGATGTTGTCCATCCAAGAATGCCACGTCCGTaGATGGGCCTCAGGCAGTATACGGAGGTCACCCCG | + |
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Preference number: 6 (lower is better) Translates to: VSDVVHPRMPRP*MGLRQYTEVTP Trigger: CGGGGTGACCTCCGTATACTGCCTGAGGCCCATCAACGGACGTGGCATTCTTGGATGGACAACATCAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS TCA 72 bp | GGTTGTAGTCAGCACGCAGGGAGCGCACAGCTCGAGTaGTGCTCAGAGCTAGTTCAAGAGCAGCTTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GCSQHAGSAQLE*CSELVQEQLQL Trigger: AAGCTGAAGCTGCTCTTGAACTAGCTCTGAGCATCACTCGAGCTGTGCGCTCCCTGCGTGCTGACTACAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | GCTCTTTCCAGAGCTTCTTTTCCACCACCACCTGGGTaGCAATGCCTGCATGGTCACAGCCTGGGTTCCATA | + |
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Preference number: 6 (lower is better) Translates to: ALSRASFPPPPG*QCLHGHSLGSI Trigger: TATGGAACCCAGGCTGTGACCATGCAGGCATTGCCACCCAGGTGGTGGTGGAAAAGAAGCTCTGGAAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | CACACTTTCCCTTTAAGTGCTGGTATCTGGGATCCTTaGGGTGCACAGCTACAGCCACGTCTCCCAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: HTFPLSAGIWDP*GAQLQPRLPAW Trigger: CCATGCTGGGAGACGTGGCTGTAGCTGTGCACCCCAAGGATCCCAGATACCAGCACTTAAAGGGAAAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | GGTCCACTCCATTCAGCACAGGTTTTAGACACTCCTTaGAGGTTGCTGAGGGCACAAAGCCCTTCCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GPLHSAQVLDTP*RLLRAQSPSQG Trigger: GCCTTGGGAAGGGCTTTGTGCCCTCAGCAACCTCCAAGGAGTGTCTAAAACCTGTGCTGAATGGAGTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173142.2 |
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| CDS CAA 90 bp | CCACACTCGGGAATCCCTGCTGGAAAGTCGGCCTTCTGTCCTTCTTaGGCTTTCTCCACCTCACTGGGATCCAGGTTGCTGTTCAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: PHSGIPAGKSAFCPS*AFSTSLGSRLLFSS Trigger: ACTACTGAACAGCAACCTGGATCCCAGTGAGGTGGAGAAAGCCAAAGAAGGACAGAAGGCCGACTTTCCAGCAGGGATTCCCGAGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087315.14 ENSMUST00000173142.2 ENSMUST00000173584.8 |
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| CDS TCA 72 bp | GATGCACATCATGAAGACACCCCGGGGATTTGGTGCTaGCACACTAGGACGCCCGTACTCTGGCTTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: DAHHEDTPGIWC*HTRTPVLWLEE Trigger: TTCTTCAAGCCAGAGTACGGGCGTCCTAGTGTGTCAGCACCAAATCCCCGGGGTGTCTTCATGATGTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS TCA 72 bp | ACCAGGTGTCCAACACATCCTCATCTTGCTGAAGGCTaGTCTTGTCAGGGGACACTCCAAACTCCCGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TRCPTHPHLAEG*SCQGTLQTPVL Trigger: CAGCACGGGAGTTTGGAGTGTCCCCTGACAAGATCAGCCTTCAGCAAGATGAGGATGTGTTGGACACCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS TCA 72 bp | AGTGACGGTACCCCAGGATCCTGTTCACATCCAGGTTaGTGTCTCGACCTTGGGATGTGTAGGCACAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SDGTPGSCSHPG*CLDLGMCRHRV Trigger: GACTCTGTGCCTACACATCCCAAGGTCGAGACATCAACCTGGATGTGAACAGGATCCTGGGGTACCGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087315.14 ENSMUST00000173142.2 ENSMUST00000173584.8 |
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| CDS TCA 72 bp | AGAGCTCATAGAGCCAAAAGCTGTACTGGGCGGTGGTaGTGGCCGGGAAATCGTAAGCCTGGAAGCCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: RAHRAKSCTGRW*WPGNRKPGSLH Trigger: ATGAAGGCTTCCAGGCTTACGATTTCCCGGCCATCACCACCGCCCAGTACAGCTTTTGGCTCTATGAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS GCA 72 bp | CTTGCTCATCTTCCTGCCATGAGCATCACGCACGATTaGATGGAGATAGACCTCTCTGAAGGGCAGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LAHLPAMSITHD*MEIDLSEGQLP Trigger: GGGAAGCTGCCCTTCAGAGAGGTCTATCTCCATGCAATCGTGCGTGATGCTCATGGCAGGAAGATGAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CAA 72 bp | TGGTCCACTCCATTCAGCACAGGTTTTAGACACTCCTaGGAGGTTGCTGAGGGCACAAAGCCCTTCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: WSTPFSTGFRHS*EVAEGTKPFPR Trigger: CCTTGGGAAGGGCTTTGTGCCCTCAGCAACCTCCAAGGAGTGTCTAAAACCTGTGCTGAATGGAGTGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173142.2 |
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| CDS GCA 72 bp | TTCTCTGGTTTTGGTTTCTTCTCTCCGTGCGGGGGCTaGTGCTGGGTCTTCTGCTTCTGCTGGAATTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FSGFGFFSPCGG*CWVFCFCWNFS Trigger: AGAGAAATTCCAGCAGAAGCAGAAGACCCAGCAGCAGCCCCCGCACGGAGAGAAGAAACCAAAACCAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS GCA 72 bp | CTTCTTTGGCTTTCTCCACCTCACTGGGATCCAGGTTaGTGTTCAGTAGTTGGTCATAGAGGCCCTGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LLWLSPPHWDPG*CSVVGHRGPAR Trigger: CCTTGCAGGGCCTCTATGACCAACTACTGAACAGCAACCTGGATCCCAGTGAGGTGGAGAAAGCCAAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | GGTTTTGGTTTCTTCTCTCCGTGCGGGGGCTGCTGCTaGGTCTTCTGCTTCTGCTGGAATTTCTCTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GFGFFSPCGGCC*VFCFCWNFSSF Trigger: GAAACTAGAGAAATTCCAGCAGAAGCAGAAGACCCAGCAGCAGCCCCCGCACGGAGAGAAGAAACCAAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | AAGAATGGGTGGACGACACACTTTCCCTTTAAGTGCTaGTATCTGGGATCCTTGGGGTGCACAGCTACAGCC | + |
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Preference number: 6 (lower is better) Translates to: KNGWTTHFPFKC*YLGSLGCTATA Trigger: GGCTGTAGCTGTGCACCCCAAGGATCCCAGATACCAGCACTTAAAGGGAAAGTGTGTCGTCCACCCATTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | TCGAAGACGATGGGAAGGCTCCGGGACAAGAATGGGTaGACGACACACTTTCCCTTTAAGTGCTGGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: SKTMGRLRDKNG*TTHFPFKCWYL Trigger: CAGATACCAGCACTTAAAGGGAAAGTGTGTCGTCCACCCATTCTTGTCCCGGAGCCTTCCCATCGTCTTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS CCA 72 bp | TGCCAAACTCCATGTCTACAAAGTCATCGAAGACGATaGGAAGGCTCCGGGACAAGAATGGGTGGACGACAC | + |
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Preference number: 6 (lower is better) Translates to: CQTPCLQSHRRR*EGSGTRMGGRH Trigger: GTGTCGTCCACCCATTCTTGTCCCGGAGCCTTCCCATCGTCTTCGATGACTTTGTAGACATGGAGTTTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS GCA 72 bp | GACAAGAATGGGTGGACGACACACTTTCCCTTTAAGTaGTGGTATCTGGGATCCTTGGGGTGCACAGCTACA | + |
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Preference number: 6 (lower is better) Translates to: DKNGWTTHFPFK*WYLGSLGCTAT Trigger: TGTAGCTGTGCACCCCAAGGATCCCAGATACCAGCACTTAAAGGGAAAGTGTGTCGTCCACCCATTCTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087315.14 ENSMUST00000173584.8 |
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| CDS TCA 72 bp | GCAAACTTGGTAGCATTCCAGAGTTTGTTGCAGAAGTaGCGGTACCCCAGGATCCTGTTCACATCCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ANLVAFQSLLQK*RYPRILFTSRL Trigger: CAACCTGGATGTGAACAGGATCCTGGGGTACCGTCACTTCTGCAACAAACTCTGGAATGCTACCAAGTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087315.14 ENSMUST00000173142.2 ENSMUST00000173584.8 |
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