Pregenerated sensors for VANGL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026556Ensembl transcript IDs: ENSMUST00000027837.13, ENSMUST00000111263.9, ENSMUST00000111264.8, ENSMUST00000138714.2, ENSMUST00000153662.8
Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCAAGCATGAGAAACCACGGAGCCACCGGTGGGACAGCGCTGGTTaGGGAAACTGCTCAGAGAGACTGGGTCAGCTGCCCACCCATAGC | + |
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Preference number: 1 (lower is better) Translates to: CKHEKPRSHRWDSAG*GNCSERLGQLPTHS Trigger: GCTATGGGTGGGCAGCTGACCCAGTCTCTCTGAGCAGTTTCCTCAACCAGCGCTGTCCCACCGGTGGCTCCGTGGTTTCTCATGCTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR GCA 90 bp | TGTCCCACAGGAGTTTGGCACCATGGTCCTCTAGGGTCAGAGCTGTaGCCCCAAGAGAAACTCTATCAGGGGCCACTAGAGAGCGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: CPTGVWHHGPLGSEL*PQEKLYQGPLESAA Trigger: AGCCGCGCTCTCTAGTGGCCCCTGATAGAGTTTCTCTTGGGGGCACAGCTCTGACCCTAGAGGACCATGGTGCCAAACTCCTGTGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 90 bp | GCCACCGGTGGGACAGCGCTGGTTGAGGAAACTGCTCAGAGAGACTaGGTCAGCTGCCCACCCATAGCAGTTCACAGCATGAAGACAACT | + |
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Preference number: 1 (lower is better) Translates to: ATGGTALVEETAQRD*VSCPPIAVHSMKTT Trigger: AGTTGTCTTCATGCTGTGAACTGCTATGGGTGGGCAGCTGACCCAGTCTCTCTGAGCAGTTTCCTCAACCAGCGCTGTCCCACCGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 90 bp | AGCGTAGGGACCGAGGATAGGATTAGCTGTTGTCCCACAGGAGTTTaGCACCATGGTCCTCTAGGGTCAGAGCTGTGCCCCCAAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: SVGTEDRISCCPTGV*HHGPLGSELCPQEK Trigger: TTTCTCTTGGGGGCACAGCTCTGACCCTAGAGGACCATGGTGCCAAACTCCTGTGGGACAACAGCTAATCCTATCCTCGGTCCCTACGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR GCA 90 bp | GGGACAGCGCTGGTTGAGGAAACTGCTCAGAGAGACTGGGTCAGCTaGCCACCCATAGCAGTTCACAGCATGAAGACAACTTCCCATTCT | + |
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Preference number: 1 (lower is better) Translates to: GTALVEETAQRDWVS*PPIAVHSMKTTSHS Trigger: AGAATGGGAAGTTGTCTTCATGCTGTGAACTGCTATGGGTGGGCAGCTGACCCAGTCTCTCTGAGCAGTTTCCTCAACCAGCGCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 90 bp | ATAAAGAGCCCAGAAAGCGAGGCGGGAGAAAAGAGGATGGGACCCTaGAAGGCCATGGTAAAGAGACCCCTGAGGCAAAGAACTGGATTT | + |
|
Preference number: 1 (lower is better) Translates to: IKSPESEAGEKRMGP*KAMVKRPLRQRTGF Trigger: AAATCCAGTTCTTTGCCTCAGGGGTCTCTTTACCATGGCCTTCCAGGGTCCCATCCTCTTTTCTCCCGCCTCGCTTTCTGGGCTCTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR GCA 90 bp | AGTGAGGTCAGTGACAAGGGTCTCTCCAACCTCAGGGGTCTATCCTaGCCTTCCTCTCGGGAGTTGTCTAAGAAAGACACATTACACCTT | + |
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Preference number: 1 (lower is better) Translates to: SEVSDKGLSNLRGLS*PSSRELSKKDTLHL Trigger: AAGGTGTAATGTGTCTTTCTTAGACAACTCCCGAGAGGAAGGGCAGGATAGACCCCTGAGGTTGGAGAGACCCTTGTCACTGACCTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 90 bp | CACAGGGACATTTCTCCATCGAAGCCACCAGGACAGTCATCCGCATaGATCCCAGAAAGAAAGATGTGGGTGTTCCCTATTTCTAGTCCT | + |
|
Preference number: 1 (lower is better) Translates to: HRDISPSKPPGQSSA*IPERKMWVFPISSP Trigger: AGGACTAGAAATAGGGAACACCCACATCTTTCTTTCTGGGATCCATGCGGATGACTGTCCTGGTGGCTTCGATGGAGAAATGTCCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 90 bp | AGTTGTGAGGCACTGTTTCCTGCAGGGCCTGGAGTGATACAAAATTaGAGGGCAGGGTGGTTCCCAGGTATTGTTAACAAGATTTATCTC | + |
|
Preference number: 1 (lower is better) Translates to: SCEALFPAGPGVIQN*RAGWFPGIVNKIYL Trigger: GAGATAAATCTTGTTAACAATACCTGGGAACCACCCTGCCCTCCAATTTTGTATCACTCCAGGCCCTGCAGGAAACAGTGCCTCACAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 90 bp | CTGTTTCCTGCAGGGCCTGGAGTGATACAAAATTGGAGGGCAGGGTaGTTCCCAGGTATTGTTAACAAGATTTATCTCCAGATTTCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: LFPAGPGVIQNWRAG*FPGIVNKIYLQISR Trigger: TCTGGAAATCTGGAGATAAATCTTGTTAACAATACCTGGGAACCACCCTGCCCTCCAATTTTGTATCACTCCAGGCCCTGCAGGAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 90 bp | TGGTTCCCAGGTATTGTTAACAAGATTTATCTCCAGATTTCCAGATaGGAAAAACTGAGGAAGAGGGGAGACTGGGTACAGGATAAGTTA | + |
|
Preference number: 1 (lower is better) Translates to: WFPGIVNKIYLQISR*EKLRKRGDWVQDKL Trigger: TAACTTATCCTGTACCCAGTCTCCCCTCTTCCTCAGTTTTTCCCATCTGGAAATCTGGAGATAAATCTTGTTAACAATACCTGGGAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR GCA 90 bp | ACATTTACAATCTCACTTGGAAGAGATTCAAGAAGCCCTTCCTTTTaGGCACAGAAGGACAAATTACAACAATCACACAATCAGAACAGA | + |
|
Preference number: 1 (lower is better) Translates to: TFTISLGRDSRSPSF*AQKDKLQQSHNQNR Trigger: TCTGTTCTGATTGTGTGATTGTTGTAATTTGTCCTTCTGTGCGCAAAAGGAAGGGCTTCTTGAATCTCTTCCAAGTGAGATTGTAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGATGAGCCAGGATGCCACCCAGCCGGAGCACACACACAGAGTGCACTGGAACATGTATCCTTCATaGGGAAGGGTGGGGAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: VGMSQDATQPEHTHRVHWNMYPS*GRVGKN Trigger: GTTCTTCCCCACCCTTCCCCATGAAGGATACATGTT...CCAGTGCACTCTGTGTGTGTGCTCCGGCTGGGTGGCATCCTGGCTCATCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAACCAACAGGGAGAGCAGGGACCCAGACAAACAGGGACTAAGAGAATCCTGTGCCCACAAAGGCAATaGCCCCAATCACCATCCGGG | + |
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Preference number: 2 (lower is better) Translates to: PNQQGEQGPRQTGTKRILCPQRQ*PQSPSG Trigger: CCCGGATGGTGATTGGGGTCATTGCCTTTGTGGGCA...CAGGATTCTCTTAGTCCCTGTTTGTCTGGGTCCCTGCTCTCCCTGTTGGTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCACCGGTGGGACAGCGCTGGTTGAGGAAACTGCTCAGAGAGACTGGGTCAAGATACCACAGTTCTaGCACGAAGGACCAAAACGC | + |
|
Preference number: 2 (lower is better) Translates to: GATGGTALVEETAQRDWVKIPQF*HEGPKR Trigger: GCGTTTTGGTCCTTCGTGTCAGAACTGTGGTATCTT...GACCCAGTCTCTCTGAGCAGTTTCCTCAACCAGCGCTGTCCCACCGGTGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGGTGGGGAAGAACAGGTCAGTGGGTTCAGAGGGACAAGTGAGGTCAGTGAGGAGTTTGGCACCATaGTCCTCTAGGGTCAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: GRVGKNRSVGSEGQVRSVRSLAP*SSRVRA Trigger: AGCTCTGACCCTAGAGGACCATGGTGCCAAACTCCT...CACTGACCTCACTTGTCCCTCTGAACCCACTGACCTGTTCTTCCCCACCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGATGAGCCAGGATGCCACCCAGCCGGAGCACACACACAGAGTGCACTGGGACAACTTCCCATTCTaGAGAAGCAAAAGACACACA | + |
|
Preference number: 2 (lower is better) Translates to: VGMSQDATQPEHTHRVHWDNFPF*RSKRHT Trigger: TGTGTGTCTTTTGCTTCTCCAGAATGGGAAGTTGTC...CCAGTGCACTCTGTGTGTGTGCTCCGGCTGGGTGGCATCCTGGCTCATCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGATGAGCCAGGATGCCACCCAGCCGGAGCACACACACAGAGTGCACTGGTTGCCTATGATCACATaGCCATACAAGTCAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: VGMSQDATQPEHTHRVHWLPMIT*PYKSET Trigger: TGTTTCTGACTTGTATGGTCATGTGATCATAGGCAA...CCAGTGCACTCTGTGTGTGTGCTCCGGCTGGGTGGCATCCTGGCTCATCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGGTGGGGAAGAACAGGTCAGTGGGTTCAGAGGGACAAGTGAGGTCAGTGCTAGGGTCAGAGCTGTaGCCCCAAGAGAAACTCTAT | + |
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Preference number: 2 (lower is better) Translates to: GRVGKNRSVGSEGQVRSVLGSEL*PQEKLY Trigger: ATAGAGTTTCTCTTGGGGGCACAGCTCTGACCCTAG...CACTGACCTCACTTGTCCCTCTGAACCCACTGACCTGTTCTTCCCCACCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCATCCTTCGACCCCAAGGTTaGTCAGGGTCTGCATGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: KQQQNPLLPTKAMTPITILRPQG*SGSACH Trigger: ATGACATGCAGACCCTGACCAACCTTGGGGTCGAAG...GATGGTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACGAATCCTGCTCAAAGTaGCTACTGAGATTCGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LKATAKPALAHKGNDPNHESCSK*LLRFVQ Trigger: CTGAACGAATCTCAGTAGTCACTTTGAGCAGGATTC...GTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAACCAACAGGGAGAGCAGGGACCCAGACAAACAGGGACTAAGAGAATCCTGGGTTATTTAAAGAAGTaGCACAGGGACATTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PNQQGEQGPRQTGTKRILGYLKK*HRDISP Trigger: TGGAGAAATGTCCCTGTGTCACTTCTTTAAATAACC...CAGGATTCTCTTAGTCCCTGTTTGTCTGGGTCCCTGCTCTCCCTGTTGGTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCTCCAGATTTCCAGATaGGAAAAACTGAGGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LKATAKPALAHKGNDPNHLQISR*EKLRKR Trigger: CCTCTTCCTCAGTTTTTCCCATCTGGAAATCTGGAG...GTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAGCAGACGAAGATACCACAGTTCTGACACGAAGGACCAAAACGCTACCAAATTGGAGGGCAGGGTaGTTCCCAGGTATTGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: TKADEDTTVLTRRTKTLPNWRAG*FPGIVN Trigger: GTTAACAATACCTGGGAACCACCCTGCCCTCCAATT...TGGTAGCGTTTTGGTCCTTCGTGTCAGAACTGTGGTATCTTCGTCTGCTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGCATGTCATGGAGTCCTTAAGAAGTCAACATGTATCCTTCATGGGGAAGGGAGCAGTAAAGACTCCTaGGTAGAAGACTGCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: SACHGVLKKSTCILHGEGSSKDS*VEDCTS Trigger: GGAAGTGCAGTCTTCTACTCAGGAGTCTTTACTGCT...CCCTTCCCCATGAAGGATACATGTTGACTTCTTAAGGACTCCATGACATGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAGCAGACGAAGATACCACAGTTCTGACACGAAGGACCAAAACGCTACCAACCTCTGTTTGCCTATaGTCACATGACCATACAAGT | + |
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Preference number: 2 (lower is better) Translates to: TKADEDTTVLTRRTKTLPTSVCL*SHDHTS Trigger: ACTTGTATGGTCATGTGATCATAGGCAAACAGAGGT...TGGTAGCGTTTTGGTCCTTCGTGTCAGAACTGTGGTATCTTCGTCTGCTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGAAAGACACATTACACCTTCCCCACAGCCCTGGTAAAGTGGTCAGAGAGACCTCTGTTTGCCTATaGTCACATGACCATACAAGT | + |
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Preference number: 2 (lower is better) Translates to: SKKDTLHLPHSPGKVVRETSVCL*SHDHTS Trigger: ACTTGTATGGTCATGTGATCATAGGCAAACAGAGGT...CTCTCTGACCACTTTACCAGGGCTGTGGGGAAGGTGTAATGTGTCTTTCTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAGCAGACGAAGATACCACAGTTCTGACACGAAGGACCAAAACGCTACCATTGCCTATGATCACATaGCCATACAAGTCAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: TKADEDTTVLTRRTKTLPLPMIT*PYKSET Trigger: TGTTTCTGACTTGTATGGTCATGTGATCATAGGCAA...TGGTAGCGTTTTGGTCCTTCGTGTCAGAACTGTGGTATCTTCGTCTGCTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CAA 90 bp | TACATTTACAATCTCACTTGGAAGAGATTCAAGAAGCCCTTCCTTTaGCGCACAGAAGGACAAATTACAACAATCACACAATCAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: YIYNLTWKRFKKPFL*RTEGQITTITQSEQ Trigger: CTGTTCTGATTGTGTGATTGTTGTAATTTGTCCTTCTGTGCGCAAAAGGAAGGGCTTCTTGAATCTCTTCCAAGTGAGATTGTAAATGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 72 bp | GGAGGCACGGTGTCCTGGTGTGGAGGCACGGCGTCCTaGTGTAGAGGGAAGAGCGGTAAGCCCGCACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GGTVSWCGGTAS*CRGKSGKPALR Trigger: CCTCAGTGCGGGCTTACCGCTCTTCCCTCTACACCAGGACGCCGTGCCTCCACACCAGGACACCGTGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR TCA 72 bp | GGAGCTCAGGAGGCAAGGGTAGAATCCGGAAGGCCCTaGATGCTTCCATCCAGGGAAGGTTTGCGGGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GAQEARVESGRP*MLPSREGLRGK Trigger: CTTCCCCCGCAAACCTTCCCTGGATGGAAGCATTCAGGGCCTTCCGGATTCTACCCTTGCCTCCTGAGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR CAA 90 bp | CCCAACCAACAGGGAGAGCAGGGACCCAGACAAACAGGGACTAAGAGAATCCTGGTCACAGGTGCATCCTaGCCCAGGGACTCAGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: PNQQGEQGPRQTGTKRILVTGAS*PRDSGL Trigger: TAGCCCTGAGTCCCTGGGCAAGGATGCACCTGTGAC...CAGGATTCTCTTAGTCCCTGTTTGTCTGGGTCCCTGCTCTCCCTGTTGGTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 72 bp | ACCGAGGATAGGATTAGCTGTTGTCCCACAGGAGTTTaGCACCATGGTCCTCTAGGGTCAGAGCTGTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: TEDRISCCPTGV*HHGPLGSELCP Trigger: GGGGCACAGCTCTGACCCTAGAGGACCATGGTGCCAAACTCCTGTGGGACAACAGCTAATCCTATCCTCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 72 bp | CCAGAAAGCGAGGCGGGAGAAAAGAGGATGGGACCCTaGAAGGCCATGGTAAAGAGACCCCTGAGGCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: PESEAGEKRMGP*KAMVKRPLRQR Trigger: TCTTTGCCTCAGGGGTCTCTTTACCATGGCCTTCCAGGGTCCCATCCTCTTTTCTCCCGCCTCGCTTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGTGGGGAAGAACAGGTCAGTGGGTTCAGAGGGACAAGTGAGGTCAGTGTGGAGTGATACAAAATaGGAGGGCAGGGTGGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: GRVGKNRSVGSEGQVRSVWSDTK*EGRVVP Trigger: GGGAACCACCCTGCCCTCCAATTTTGTATCACTCCA...CACTGACCTCACTTGTCCCTCTGAACCCACTGACCTGTTCTTCCCCACCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR-3UTR CAA 90 bp | GTGGGGATGAGCCAGGATGCCACCCAGCCGGAGCACACACACAGAGTGCACTGGCACAGAGCCATACATTaGACAATTCATCCTGACATC | + |
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Preference number: 3 (lower is better) Translates to: VGMSQDATQPEHTHRVHWHRAIH*TIHPDI Trigger: GATGTCAGGATGAATTGTCAAATGTATGGCTCTGTG...CCAGTGCACTCTGTGTGTGTGCTCCGGCTGGGTGGCATCCTGGCTCATCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR GCA 72 bp | CGCACGGTGAGATCAAAGGTACCCCATCTTAGGGCGTaGTTTGCACAGCAAATACCAGCAGAATACCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RTVRSKVPHLRA*FAQQIPAEYPG Trigger: CCCTGGGTATTCTGCTGGTATTTGCTGTGCAAAGCACGCCCTAAGATGGGGTACCTTTGATCTCACCGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR TCA 72 bp | GGCCCGTGCAGGGGCTTTGAGGGTTATTTAAAGAAGTaGCACAGGGACATTTCTCCATCGAAGCCACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GPCRGFEGYLKK*HRDISPSKPPG Trigger: TCCTGGTGGCTTCGATGGAGAAATGTCCCTGTGTCACTTCTTTAAATAACCCTCAAAGCCCCTGCACGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR TCA 72 bp | TGTAGAGGGAAGAGCGGTAAGCCCGCACTGAGGTCATaGAAACAAAGGCCAAGTTGTGTAGTGGGGATGAGC | + |
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Preference number: 3 (lower is better) Translates to: CRGKSGKPALRS*KQRPSCVVGMS Trigger: GCTCATCCCCACTACACAACTTGGCCTTTGTTTTCATGACCTCAGTGCGGGCTTACCGCTCTTCCCTCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 72 bp | AAGACACATTACACCTTCCCCACAGCCCTGGTAAAGTaGTCAGAGAGGTTCCACCTCTGTTTGCCTATGATC | + |
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Preference number: 3 (lower is better) Translates to: KTHYTFPTALVK*SERFHLCLPMI Trigger: GATCATAGGCAAACAGAGGTGGAACCTCTCTGACCACTTTACCAGGGCTGTGGGGAAGGTGTAATGTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR CCA 72 bp | CTTAAGAAGTCAACATGTATCCTTCATGGGGAAGGGTaGGGAAGAACAGGTCAGTGGGTTCAGAGGGACAAG | + |
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Preference number: 3 (lower is better) Translates to: LKKSTCILHGEG*GRTGQWVQRDK Trigger: CTTGTCCCTCTGAACCCACTGACCTGTTCTTCCCCACCCTTCCCCATGAAGGATACATGTTGACTTCTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR GCA 72 bp | TCCTTGTCTTTATTAAATCAGGATTCACAACGGGAATaGTGTGGCCAGCCAGCTAGGAGCGAAAGCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: SLSLLNQDSQRE*CGQPARSESTE Trigger: CTCTGTGCTTTCGCTCCTAGCTGGCTGGCCACAGCATTCCCGTTGTGAATCCTGATTTAATAAAGACAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR GCA 72 bp | AGCAGGGACCCAGACAAACAGGGACTAAGAGAATCCTaGCTCCTTGTCTTTATTAAATCAGGATTCACAACG | + |
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Preference number: 3 (lower is better) Translates to: SRDPDKQGLRES*LLVFIKSGFTT Trigger: CGTTGTGAATCCTGATTTAATAAAGACAAGGAGGCAGGATTCTCTTAGTCCCTGTTTGTCTGGGTCCCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR TCA 72 bp | TCAGAGAGGTTCCACCTCTGTTTGCCTATGATCACATaGCCATACAAGTCAGAAACAGCAGTAAAGACTCCT | + |
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Preference number: 3 (lower is better) Translates to: SERFHLCLPMIT*PYKSETAVKTP Trigger: AGGAGTCTTTACTGCTGTTTCTGACTTGTATGGTCATGTGATCATAGGCAAACAGAGGTGGAACCTCTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR TCA 72 bp | ATTAGAGGGTTAGGGAATCCTGCTCAAAGTGACTACTaGGATTCGTTCAGATTTGCTGCAAAGGCTGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: IRGLGNPAQSDY*DSFRFAAKAVL Trigger: TAACACAGCCTTTGCAGCAAATCTGAACGAATCTCAGTAGTCACTTTGAGCAGGATTCCCTAACCCTCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| 3UTR GCA 72 bp | ATCTCACTTGGAAGAGATTCAAGAAGCCCTTCCTTTTaGGCACAGAAGGACAAATTACAACAATCACACAAT | + |
|
Preference number: 3 (lower is better) Translates to: ISLGRDSRSPSF*AQKDKLQQSHN Trigger: ATTGTGTGATTGTTGTAATTTGTCCTTCTGTGCGCAAAAGGAAGGGCTTCTTGAATCTCTTCCAAGTGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGGATGAGCCAGGATGCCACCCAGCCGGAGCACACACACAGAGTGCACTGGGCCTGGCCCTGCGCTTaGGCACTCTGCGCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGMSQDATQPEHTHRVHWAWPCA*ALCAHA Trigger: AGCATGAGCGCAGAGTGCGCAAGCGCAGGGCCAGGC...CCAGTGCACTCTGTGTGTGTGCTCCGGCTGGGTGGCATCCTGGCTCATCCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCCCAGCCACCACGAGCCTaGCCCTGCGCTTGCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GRNVSGPENQAPPTPQEPQPPRA*PCACAL Trigger: GAGTGCGCAAGCGCAGGGCCAGGCTCGTGGTGGCTG...GGGTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGCTGCCACTCGCTGGATaGAGGCCCCTGCCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLAEMCQGQRTKPLPLRRLPLAG*RPLPPS Trigger: GGAAGGTGGCAGGGGCCTGCATCCAGCGAGTGGCAG...CCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | GGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGCGGACTTGGGCAGGTTaGGGAGGGCGGGGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLAEMCQGQRTKPLPLRRRTWAG*GGRGCR Trigger: TCTACAACCCCGCCCTCCTCAACCTGCCCAAGTCCG...CCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGTGTGCTTCCGGGAGCTaGGGGAGTGGCCCGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLAEMCQGQRTKPLPLRRCASGS*GSGPTC Trigger: ACAAGTCGGGCCACTCCCGCAGCTCCCGGAAGCACA...CCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCCTGGATGCAGGCCCCTaGCACCTTCCCAAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLAEMCQGQRTKPLPLRLDAGP*HLPKAG Trigger: CCCAGCCTTGGGAAGGTGGCAGGGGCCTGCATCCAG...GCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGGATGAGCCAGGATGCCACCCAGCCGGAGCACACACACAGAGTGCACTGGCCTTGGCGATGCGCGTaGGGTCATCATGGGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: VGMSQDATQPEHTHRVHWPWRCA*GHHGRY Trigger: GTATCTCCCATGATGACCTCACGCGCATCGCCAAGG...CCAGTGCACTCTGTGTGTGTGCTCCGGCTGGGTGGCATCCTGGCTCATCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCCAACTGGGGCTGGAGCTaGCGGAGCTCCAGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GRNVSGPENQAPPTPQEPNWGWS*RSSSRT Trigger: AGTTCTGCTGGAGCTCCGTCAGCTCCAGCCCCAGTT...GGGTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCCGGACTTGGGCAGGTTaGGGAGGGCGGGGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGLAEMCQGQRTKPLPLRRTWAG*GGRGCR Trigger: TCTACAACCCCGCCCTCCTCAACCTGCCCAAGTCCG...GCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCAGAGCAGCGCCAGAATaGCCCCTGCCGCCACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGSRTGRNVSGPENQAPPRAAPE*PLPPRP Trigger: TGGGCGTGGCGGCAGGGGCCATTCTGGCGCTGCTCT...GGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGGATGCAAAGATCGCTTaGGCTGCTTCCCGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLAEMCQGQRTKPLPLRRDAKIA*AASRGS Trigger: GGACCCCCGGGAAGCAGCCCAAGCGATCTTTGCATC...CCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACAACTGGGGCTGGAGCTaGCGGAGCTCCAGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNNWGWS*RSSSRT Trigger: AGTTCTGCTGGAGCTCCGTCAGCTCCAGCCCCAGTT...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTAGAGCAGCGCCAGAATaGCCCCTGCCGCCACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARGSRTGRNVSGPENQAPRAAPE*PLPPRP Trigger: TGGGCGTGGCGGCAGGGGCCATTCTGGCGCTGCTCT...AGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCCACCGGTGGGACAGCGCTGGTTGAGGAAACTGCTCAGAGAGACTGGGTCCACACTGCCACTCGCTaGATGCTGAGATGGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: GATGGTALVEETAQRDWVHTATR*MLRWPT Trigger: TGTCGGCCATCTCAGCATCCAGCGAGTGGCAGTGTG...GACCCAGTCTCTCTGAGCAGTTTCCTCAACCAGCGCTGTCCCACCGGTGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCCACACTGCCACTCGCTaGATGCAGGCCCCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RGSRTGRNVSGPENQAPPHTATR*MQAPAT Trigger: GGTGGCAGGGGCCTGCATCCAGCGAGTGGCAGTGTG...GGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCCTTGGCGATGCGCGTaGGGTCATCATGGGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNPWRCA*GHHGRY Trigger: GTATCTCCCATGATGACCTCACGCGCATCGCCAAGG...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCGGACTTGGGCAGGTTaGGGAGGGCGGGGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSRTGRNVSGPENQAPPTRTWAG*GGRGCR Trigger: TCTACAACCCCGCCCTCCTCAACCTGCCCAAGTCCG...AGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGGATGAGCCAGGATGCCACCCAGCCGGAGCACACACACAGAGTGCACTGGTCATGGGAGATACTGTaGTCAGAAGTGCCCGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VGMSQDATQPEHTHRVHWSWEIL*SEVPVT Trigger: GGTCACGGGCACTTCTGAGCACAGTATCTCCCATGA...CCAGTGCACTCTGTGTGTGTGCTCCGGCTGGGTGGCATCCTGGCTCATCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCGCCTGGCCCTGCGCTTaGGCACTCTGCGCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEEVGLAEMCQGQRTKPLAWPCA*ALCAHA Trigger: AGCATGAGCGCAGAGTGCGCAAGCGCAGGGCCAGGC...GAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCCCATTGTAGAAGCGGCTaGCCCCATCTGTGGATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRNVSGPENQAPPTPQEPHCRSG*PHLWIA Trigger: TGCGATCCACAGATGGGGCCAGCCGCTTCTACAATG...GGGTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCTGTGCTTCCGGGAGCTaGGGGAGTGGCCCGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEEVGLAEMCQGQRTKPLCASGS*GSGPTC Trigger: ACAAGTCGGGCCACTCCCGCAGCTCCCGGAAGCACA...GAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTTGTGCTTCCGGGAGCTaGGGGAGTGGCCCGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARGSRTGRNVSGPENQAPCASGS*GSGPTC Trigger: ACAAGTCGGGCCACTCCCGCAGCTCCCGGAAGCACA...AGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACTGCAGCCGCTTAATGTaGGTGAAGGCCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNCSRLM*VKASST Trigger: TGTGGAGGAGGCCTTCACGCACATTAAGCGGCTGCA...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCTGCAGCCGCTTAATGTaGGTGAAGGCCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VGLAEMCQGQRTKPLPLRCSRLM*VKASST Trigger: TGTGGAGGAGGCCTTCACGCACATTAAGCGGCTGCA...GCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCTCCCTGGGGTTCTTCTaGTCCTCTTCCTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLSLGFF*SSSCSR Trigger: GCGGCTGCAGGAAGAGGAGCAGAAGAACCCCAGGGA...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGGTGCGAAGGTACTTCTaGATGGCACGAGCCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLAEMCQGQRTKPLPLRRVRRYF*MARAMD Trigger: ATCCATGGCTCGTGCCATGCAGAAGTACCTTCGCAC...CCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCATTGTAGAAGCGGCTaGCCCCATCTGTGGATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNHCRSG*PHLWIA Trigger: TGCGATCCACAGATGGGGCCAGCCGCTTCTACAATG...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCATCCAGCCACCACGAGCCTaGCCCTGCGCTTGCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KQQQNPLLPTKAMTPITIQPPRA*PCACAL Trigger: GAGTGCGCAAGCGCAGGGCCAGGCTCGTGGTGGCTG...GATGGTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACGCATGGCACGAGCCATaGATGCAAAGATCGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNAWHEP*MQRSLG Trigger: CCCAAGCGATCTTTGCATCCATGGCTCGTGCCATGC...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCCTTGGGCGTCATGTCGTaGGTAATGCAGAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRNVSGPENQAPPTPQEPLGVMS*VMQNSR Trigger: CCTGGAGTTCTGCATTACCCACGACATGACGCCCAA...GGGTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACGAAGACTCGGGGCAGTaGGGCCTTGGGCCGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTRARGSRTGRNVSGPENEDSGQ*GLGPAE Trigger: TTCCGCCGGCCCAAGGCCTCACTGCCCCGAGTCTTC...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACTGCTCACTACCAAGCTaGAGTCCTGGCGCTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNCSLPS*SPGASR Trigger: TCTTGAAGCGCCAGGACTTCAGCTTGGTAGTGAGCA...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCTCCAGGATCCACACTaGCACTCGCTGGATGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLLQDPH*HSLDAE Trigger: CTCAGCATCCAGCGAGTGGCAGTGTGGATCCTGGAG...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | AAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCATCGCCTGGCCCTGCGCTTaGGCACTCTGCGCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQQQNPLLPTKAMTPITIAWPCA*ALCAHA Trigger: AGCATGAGCGCAGAGTGCGCAAGCGCAGGGCCAGGC...GATGGTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTAAAGATCGCTTGGGCTaGTTCCCGGGGGTCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSRTGRNVSGPENQAPPTKDRLG*FPGVHH Trigger: GTGATGGACCCCCGGGAAGCAGCCCAAGCGATCTTT...AGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCGGCACGAGCCATGGATaGAAAGATCGCTTGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLGTSHG*KDRLGC Trigger: GCAGCCCAAGCGATCTTTGCATCCATGGCTCGTGCC...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCCGGCCCGTGGAGTTATTaGTGCTATTTTCCTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRNVSGPENQAPPTPQEPGPWSY*CYFPLR Trigger: TCGGAGAGGAAAATAGCACCAATAACTCCACGGGCC...GGGTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCGATGCAAAGATCGCTTaGGCTGCTTCCCGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQEEVGLAEMCQGQRTKPDAKIA*AASRGS Trigger: GGACCCCCGGGAAGCAGCCCAAGCGATCTTTGCATC...GGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAAGGCTGCTGTTTGGTaGTGCGAAGGTACTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLAEMCQGQRTKPLPLRRKAAVW*CEGTSA Trigger: TGCAGAAGTACCTTCGCACCACCAAACAGCAGCCTT...CCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCCAAGGCTGCTGTTTGGTaGTGCGAAGGTACTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRNVSGPENQAPPTPQEPKAAVW*CEGTSA Trigger: TGCAGAAGTACCTTCGCACCACCAAACAGCAGCCTT...GGGTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACAGCCAACGTTCCTTGTaGTACTGGATGGTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNSQRSL*YWMVGP Trigger: TGGACCCACCATCCAGTACCACAAGGAACGTTGGCT...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCCCAAGGTCCACTGTTTaGCCAGCCAACGTTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGLAEMCQGQRTKPLPLRPRSTV*PANVPC Trigger: ACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGG...GCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCTTGGCGATGCGCGTaGGGTCATCATGGGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: ARGSRTGRNVSGPENQAPPWRCA*GHHGRY Trigger: GTATCTCCCATGATGACCTCACGCGCATCGCCAAGG...AGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCCATTCCTCAGAGAGTTTaGAGAAGGGCACCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRNVSGPENQAPPTPQEPIPQRV*RRAPSW Trigger: CCAAGAAGGTGCCCTTCTTCAAACTCTCTGAGGAAT...GGGTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCTCCCTGGGGTTCTTCTaGTCCTCTTCCTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RARGSRTGRNVSGPENQASLGFF*SSSCSR Trigger: GCGGCTGCAGGAAGAGGAGCAGAAGAACCCCAGGGA...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCAAAGATCGCTTGGGCTaGTTCCCGGGGGTCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: EQEEVGLAEMCQGQRTKPKDRLG*FPGVHH Trigger: GTGATGGACCCCCGGGAAGCAGCCCAAGCGATCTTT...GGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCGCGTGAGGTCATCATaGGAGATACTGTGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNRVRSS*EILCSE Trigger: TTCTGAGCACAGTATCTCCCATGATGACCTCACGCG...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCACACTGCCACTCGCTaGATGCTGAGATGGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: QEEVGLAEMCQGQRTKPLHTATR*MLRWPT Trigger: TGTCGGCCATCTCAGCATCCAGCGAGTGGCAGTGTG...GAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCAGCCAGACACTTTCTTaGCCAGGACGGACTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLSQTLS*PGRTWA Trigger: TGCCCAAGTCCGTCCTGGCCAAGAAAGTGTCTGGCT...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCGCATGGCACGAGCCATaGATGCAAAGATCGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSRTGRNVSGPENQAPPAWHEP*MQRSLG Trigger: CCCAAGCGATCTTTGCATCCATGGCTCGTGCCATGC...GGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCGTTCCTTGTGGTACTaGATGGTGGGTCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARGSRTGRNVSGPENQAPRSLWY*MVGPAA Trigger: GGCTGCTGGACCCACCATCCAGTACCACAAGGAACG...AGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGGAAGACTCGGGGCAGTaGGGCCTTGGGCCGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNKQEQEEVGLAEMCQGQEDSGQ*GLGPAE Trigger: TTCCGCCGGCCCAAGGCCTCACTGCCCCGAGTCTTC...CTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCTTCTGCTCCTCTTCCTaGAGCCGCTTAATGTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLFCSSS*SRLMCV Trigger: CACGCACATTAAGCGGCTGCAGGAAGAGGAGCAGAA...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCGCTGCTGTTTGGTGGTaGGAAGGTACTTCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLAAVWW*EGTSAW Trigger: CCATGCAGAAGTACCTTCGCACCACCAAACAGCAGC...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGCAGCCACCACGAGCCTaGCCCTGCGCTTGCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KNKQEQEEVGLAEMCQGQQPPRA*PCACAL Trigger: GAGTGCGCAAGCGCAGGGCCAGGCTCGTGGTGGCTG...CTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCCTTGTGGTACTGGATaGTGGGTCCAGCAGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLPCGTG*WVQQPN Trigger: ATTTGGCTGCTGGACCCACCATCCAGTACCACAAGG...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | GGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGCATGACGAACTTATGTaGCTTGGGATCCACAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLAEMCQGQRTKPLPLRRHDELM*LGIHKF Trigger: GAATTTGTGGATCCCAAGTCACATAAGTTCGTCATG...CCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCTCATGGGAGATACTGTaGTCAGAAGTGCCCGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: EQEEVGLAEMCQGQRTKPSWEIL*SEVPVT Trigger: GGTCACGGGCACTTCTGAGCACAGTATCTCCCATGA...GGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR GCA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACTCCCTGGGGTTCTTCTaGTCCTCTTCCTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QTRARGSRTGRNVSGPENSLGFF*SSSCSR Trigger: GCGGCTGCAGGAAGAGGAGCAGAAGAACCCCAGGGA...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCATCAAAGATCGCTTGGGCTaGTTCCCGGGGGTCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQQQNPLLPTKAMTPITIKDRLG*FPGVHH Trigger: GTGATGGACCCCCGGGAAGCAGCCCAAGCGATCTTT...GATGGTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | CTCAAAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACGGCACGAGCCATGGATaGAAAGATCGCTTGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKATAKPALAHKGNDPNHGTSHG*KDRLGC Trigger: GCAGCCCAAGCGATCTTTGCATCCATGGCTCGTGCC...GTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTGTGCGAAGGTACTTCTaGATGGCACGAGCCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARGSRTGRNVSGPENQAPVRRYF*MARAMD Trigger: ATCCATGGCTCGTGCCATGCAGAAGTACCTTCGCAC...AGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR GCA 90 bp | GCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTGCTGCTGTTTGGTGGTaGGAAGGTACTTCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ARGSRTGRNVSGPENQAPAAVWW*EGTSAW Trigger: CCATGCAGAAGTACCTTCGCACCACCAAACAGCAGC...AGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCGGCCCGTGGAGTTATTaGTGCTATTTTCCTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLGPWSY*CYFPLR Trigger: TCGGAGAGGAAAATAGCACCAATAACTCCACGGGCC...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCGCATGGCACGAGCCATaGATGCAAAGATCGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RARGSRTGRNVSGPENQAAWHEP*MQRSLG Trigger: CCCAAGCGATCTTTGCATCCATGGCTCGTGCCATGC...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCGGTAAGGCTGCTGTTTaGTGGTGCGAAGGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLGKAAV*WCEGTS Trigger: AGAAGTACCTTCGCACCACCAAACAGCAGCCTTACC...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCTGTGGTACTGGATGGTaGGTCCAGCAGCCAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: RGSRTGRNVSGPENQAPPCGTGW*VQQPNI Trigger: GATATTTGGCTGCTGGACCCACCATCCAGTACCACA...GGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CCA 90 bp | CTCAAAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCGTTCCTTGTGGTACTaGATGGTGGGTCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKATAKPALAHKGNDPNHRSLWY*MVGPAA Trigger: GGCTGCTGGACCCACCATCCAGTACCACAAGGAACG...GTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| CDS-3UTR TCA 90 bp | TCTAAGAAAGACACATTACACCTTCCCCACAGCCCTGGTAAAGTGGTCAGAGAGAACTGGGGCTGGAGCTaGCGGAGCTCCAGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SKKDTLHLPHSPGKVVRENWGWS*RSSSRT Trigger: AGTTCTGCTGGAGCTCCGTCAGCTCCAGCCCCAGTT...CTCTCTGACCACTTTACCAGGGCTGTGGGGAAGGTGTAATGTGTCTTTCTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGAGAGAATACACCTTaGAGCCAGACACTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLRENTP*SQTLSW Trigger: CCAAGAAAGTGTCTGGCTTCAAGGTGTATTCTCTCG...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTATTCCTCAGAGAGTTTaGAGAAGGGCACCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRTGRNVSGPENQAPPTIPQRV*RRAPSW Trigger: CCAAGAAGGTGCCCTTCTTCAAACTCTCTGAGGAAT...AGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGTGGGGAAGAACAGGTCAGTGGGTTCAGAGGGACAAGTGAGGTCAGTGCCGTGGAGTTATTGGTaGTATTTTCCTCTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRVGKNRSVGSEGQVRSVPWSYW*YFPLRE Trigger: CTCTCGGAGAGGAAAATAGCACCAATAACTCCACGG...CACTGACCTCACTTGTCCCTCTGAACCCACTGACCTGTTCTTCCCCACCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCGTGCGAAGGTACTTCTaGATGGCACGAGCCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RARGSRTGRNVSGPENQAVRRYF*MARAMD Trigger: ATCCATGGCTCGTGCCATGCAGAAGTACCTTCGCAC...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCGCTGCTGTTTGGTGGTaGGAAGGTACTTCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RARGSRTGRNVSGPENQAAAVWW*EGTSAW Trigger: CCATGCAGAAGTACCTTCGCACCACCAAACAGCAGC...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGCTCCAGGATCCACACTaGCACTCGCTGGATGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQTRARGSRTGRNVSGPELQDPH*HSLDAG Trigger: GCCTGCATCCAGCGAGTGGCAGTGTGGATCCTGGAG...CTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCGCGTGAGGTCATCATaGGAGATACTGTGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QEEVGLAEMCQGQRTKPLRVRSS*EILCSE Trigger: TTCTGAGCACAGTATCTCCCATGATGACCTCACGCG...GAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACAGCCAGACACTTTCTTaGCCAGGACGGACTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKATAKPALAHKGNDPNHSQTLS*PGRTWA Trigger: TGCCCAAGTCCGTCCTGGCCAAGAAAGTGTCTGGCT...GTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGGATGCAAAGATCGCTTaGGCTGCTTCCCGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQTRARGSRTGRNVSGPEDAKIA*AASRGS Trigger: GGACCCCCGGGAAGCAGCCCAAGCGATCTTTGCATC...CTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCGAAGGTACTTCTGCATaGCACGAGCCATGGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EQEEVGLAEMCQGQRTKPEGTSA*HEPWMQ Trigger: TTGCATCCATGGCTCGTGCCATGCAGAAGTACCTTC...GGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCGAAGGTACTTCTGCATaGCACGAGCCATGGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QEEVGLAEMCQGQRTKPLEGTSA*HEPWMQ Trigger: TTGCATCCATGGCTCGTGCCATGCAGAAGTACCTTC...GAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTAAGGCTGCTGTTTGGTaGTGCGAAGGTACTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARGSRTGRNVSGPENQAPKAAVW*CEGTSA Trigger: TGCAGAAGTACCTTCGCACCACCAAACAGCAGCCTT...AGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCGAAGGATGCTCTCCATaGTATGGTAAGGCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLEGCSP*YGKAAV Trigger: AACAGCAGCCTTACCATACCATGGAGAGCATCCTTC...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCTTGGGCGTCATGTCGTaGGTAATGCAGAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RARGSRTGRNVSGPENQALGVMS*VMQNSR Trigger: CCTGGAGTTCTGCATTACCCACGACATGACGCCCAA...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTTGTGGTACTGGATaGTGGGTCCAGCAGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RARGSRTGRNVSGPENQAPCGTG*WVQQPN Trigger: ATTTGGCTGCTGGACCCACCATCCAGTACCACAAGG...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCGTTCCTTGTGGTACTaGATGGTGGGTCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTRARGSRTGRNVSGPENRSLWY*MVGPAA Trigger: GGCTGCTGGACCCACCATCCAGTACCACAAGGAACG...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCACCAAGCTGAAGTCCTaGCGCTTCAAGAGGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: RARGSRTGRNVSGPENQATKLKS*RFKRNT Trigger: CGTGTTCCTCTTGAAGCGCCAGGACTTCAGCTTGGT...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| 3UTR CAA 72 bp | AACCTCAGGGGTCTATCCTGCCCTTCCTCTCGGGAGTaGTCTAAGAAAGACACATTACACCTTCCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLRGLSCPSSRE*SKKDTLHLPHS Trigger: GCTGTGGGGAAGGTGTAATGTGTCTTTCTTAGACAACTCCCGAGAGGAAGGGCAGGATAGACCCCTGAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCTGCAGCCGCTTAATGTaGGTGAAGGCCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTCSRLM*VKASST Trigger: TGTGGAGGAGGCCTTCACGCACATTAAGCGGCTGCA...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACAGCCAACGTTCCTTGTaGTACTGGATGGTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKATAKPALAHKGNDPNHSQRSL*YWMVGP Trigger: TGGACCCACCATCCAGTACCACAAGGAACGTTGGCT...GTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | AAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCATCCCAAGGTCCACTGTTTaGCCAGCCAACGTTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQQQNPLLPTKAMTPITIPRSTV*PANVPC Trigger: ACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGG...GATGGTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR TCA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCTGCTCACTACCAAGCTaGAGTCCTGGCGCTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTCSLPS*SPGASR Trigger: TCTTGAAGCGCCAGGACTTCAGCTTGGTAGTGAGCA...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGCTCCAGGATCCACACTaGCACTCGCTGGATGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNKQEQEEVGLAEMCQGQLQDPH*HSLDAE Trigger: CTCAGCATCCAGCGAGTGGCAGTGTGGATCCTGGAG...CTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCGTGGAGTTATTGGTaGTATTTTCCTCTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RARGSRTGRNVSGPENQAPWSYW*YFPLRE Trigger: CTCTCGGAGAGGAAAATAGCACCAATAACTCCACGG...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAGCCAGACACTTTCTTaGCCAGGACGGACTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQTRARGSRTGRNVSGPESQTLS*PGRTWA Trigger: TGCCCAAGTCCGTCCTGGCCAAGAAAGTGTCTGGCT...CTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACAGCCAACGTTCCTTGTaGTACTGGATGGTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTRARGSRTGRNVSGPENSQRSL*YWMVGP Trigger: TGGACCCACCATCCAGTACCACAAGGAACGTTGGCT...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCACCAAGCTGAAGTCCTaGCGCTTCAAGAGGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTTKLKS*RFKRNT Trigger: CGTGTTCCTCTTGAAGCGCCAGGACTTCAGCTTGGT...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACACCAAGCTGAAGTCCTaGCGCTTCAAGAGGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: QTRARGSRTGRNVSGPENTKLKS*RFKRNT Trigger: CGTGTTCCTCTTGAAGCGCCAGGACTTCAGCTTGGT...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCGAGAGAATACACCTTaGAGCCAGACACTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKATAKPALAHKGNDPNHRENTP*SQTLSW Trigger: CCAAGAAAGTGTCTGGCTTCAAGGTGTATTCTCTCG...GTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCATGACGAACTTATGTaGCTTGGGATCCACAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: EQEEVGLAEMCQGQRTKPHDELM*LGIHKF Trigger: GAATTTGTGGATCCCAAGTCACATAAGTTCGTCATG...GGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCTCATTTCCTCTATGCTaGAGCCAGGGGGTAAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: RARGSRTGRNVSGPENQASFPLC*SQGVNK Trigger: CTTATTTACCCCCTGGCTTCAGCATAGAGGAAATGA...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111264.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCATCCCGTGGAGTTATTGGTaGTATTTTCCTCTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQQQNPLLPTKAMTPITIPWSYW*YFPLRE Trigger: CTCTCGGAGAGGAAAATAGCACCAATAACTCCACGG...GATGGTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGTTCTGCTCCTCTTCCTaGAGCCGCTTAATGTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQTRARGSRTGRNVSGPEFCSSS*SRLMCV Trigger: CACGCACATTAAGCGGCTGCAGGAAGAGGAGCAGAA...CTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCATGTCATGGAGTCCTTAAGAAGTCAACATGTATCCTTCATGGGGAAGGGCATTGTAGAAGCGGCTaGCCCCATCTGTGGATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SACHGVLKKSTCILHGEGHCRSG*PHLWIA Trigger: TGCGATCCACAGATGGGGCCAGCCGCTTCTACAATG...CCCTTCCCCATGAAGGATACATGTTGACTTCTTAAGGACTCCATGACATGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACGGCCCGTGGAGTTATTaGTGCTATTTTCCTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QTRARGSRTGRNVSGPENGPWSY*CYFPLR Trigger: TCGGAGAGGAAAATAGCACCAATAACTCCACGGGCC...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCGGTAAGGCTGCTGTTTaGTGGTGCGAAGGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTGKAAV*WCEGTS Trigger: AGAAGTACCTTCGCACCACCAAACAGCAGCCTTACC...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACTGTGGTACTGGATGGTaGGTCCAGCAGCCAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: QTRARGSRTGRNVSGPENCGTGW*VQQPNI Trigger: GATATTTGGCTGCTGGACCCACCATCCAGTACCACA...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGCCAAGGTCCACTGTTTaGCCAGCCAACGTTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQTRARGSRTGRNVSGPEPRSTV*PANVPC Trigger: ACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGG...CTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCCGAGAGAATACACCTTaGAGCCAGACACTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTRENTP*SQTLSW Trigger: CCAAGAAAGTGTCTGGCTTCAAGGTGTATTCTCTCG...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCATTCCTCAGAGAGTTTaGAGAAGGGCACCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTIPQRV*RRAPSW Trigger: CCAAGAAGGTGCCCTTCTTCAAACTCTCTGAGGAAT...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGCGCGTGAGGTCATCATaGGAGATACTGTGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQTRARGSRTGRNVSGPERVRSS*EILCSE Trigger: TTCTGAGCACAGTATCTCCCATGATGACCTCACGCG...CTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAAGCAGACGAAGATACCACAGTTCTGACACGAAGGACCAAAACGCTACCAGGTAAGGCTGCTGTTTaGTGGTGCGAAGGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKADEDTTVLTRRTKTLPGKAAV*WCEGTS Trigger: AGAAGTACCTTCGCACCACCAAACAGCAGCCTTACC...TGGTAGCGTTTTGGTCCTTCGTGTCAGAACTGTGGTATCTTCGTCTGCTTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACGAAGGATGCTCTCCATaGTATGGTAAGGCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTRARGSRTGRNVSGPENEGCSP*YGKAAV Trigger: AACAGCAGCCTTACCATACCATGGAGAGCATCCTTC...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCATGTCATGGAGTCCTTAAGAAGTCAACATGTATCCTTCATGGGGAAGGGTTGGGCGTCATGTCGTaGGTAATGCAGAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SACHGVLKKSTCILHGEGLGVMS*VMQNSR Trigger: CCTGGAGTTCTGCATTACCCACGACATGACGCCCAA...CCCTTCCCCATGAAGGATACATGTTGACTTCTTAAGGACTCCATGACATGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | ACCAAAGCAGACGAAGATACCACAGTTCTGACACGAAGGACCAAAACGCTACCATGTGGTACTGGATGGTaGGTCCAGCAGCCAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: TKADEDTTVLTRRTKTLPCGTGW*VQQPNI Trigger: GATATTTGGCTGCTGGACCCACCATCCAGTACCACA...TGGTAGCGTTTTGGTCCTTCGTGTCAGAACTGTGGTATCTTCGTCTGCTTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CCA 90 bp | AAAAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGGAAGGTACTTCTGCATaGCACGAGCCATGGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KNKQEQEEVGLAEMCQGQEGTSA*HEPWMQ Trigger: TTGCATCCATGGCTCGTGCCATGCAGAAGTACCTTC...CTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCCATGACGAACTTATGTaGCTTGGGATCCACAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTHDELM*LGIHKF Trigger: GAATTTGTGGATCCCAAGTCACATAAGTTCGTCATG...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGGAAGGATGCTCTCCATaGTATGGTAAGGCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KNKQEQEEVGLAEMCQGQEGCSP*YGKAAV Trigger: AACAGCAGCCTTACCATACCATGGAGAGCATCCTTC...CTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| 3UTR CAA 72 bp | AATCTCACTTGGAAGAGATTCAAGAAGCCCTTCCTTTaGCGCACAGAAGGACAAATTACAACAATCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: NLTWKRFKKPFL*RTEGQITTITQ Trigger: TTGTGTGATTGTTGTAATTTGTCCTTCTGTGCGCAAAAGGAAGGGCTTCTTGAATCTCTTCCAAGTGAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS GCA 90 bp | GAAAGCCAGCGGGGTGAGGAACGAGAGCAGCGCCAGAATGGCCCCTaGCGCCACGCCCAGGTGGCGGGAACAATCCAACGGGACACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESQRGEEREQRQNGP*RHAQVAGTIQRDTV Trigger: GACAGTGTCCCGTTGGATTGTTCCCGCCACCTGGGCGTGGCGGCAGGGGCCATTCTGGCGCTGCTCTCGTTCCTCACCCCGCTGGCTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 ENSMUST00000153662.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCCACCGGTGGGACAGCGCTGGTTGAGGAAACTGCTCAGAGAGACTGGGTCCGCTCCAGGAAGGCCTaGGGCGTCATGTCGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GATGGTALVEETAQRDWVRSRKA*GVMSWV Trigger: TACCCACGACATGACGCCCAAGGCCTTCCTGGAGCG...GACCCAGTCTCTCTGAGCAGTTTCCTCAACCAGCGCTGTCCCACCGGTGGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CAA 90 bp | GGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGCTGTCCTCCATGTCCTaGGCGATGCGCGTGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLAEMCQGQRTKPLPLRRLSSMS*AMRVRS Trigger: TGACCTCACGCGCATCGCCAAGGACATGGAGGACAG...CCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCCGGGGCAGTGAGGCCTaGGGCCGGCGGAAGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGSRTGRNVSGPENQAPPRGSEA*GRRKNR Trigger: TCTGTTCTTCCGCCGGCCCAAGGCCTCACTGCCCCG...GGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | GTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCCGCTCCAGGAAGGCCTaGGGCGTCATGTCGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VGLAEMCQGQRTKPLPLRRSRKA*GVMSWV Trigger: TACCCACGACATGACGCCCAAGGCCTTCCTGGAGCG...GCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACTACTCATTGTGGCTGTaGTCGCGCCTCCGTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNYSLWL*SRLRAA Trigger: TGCGGCACGGAGGCGCGACAACAGCCACAATGAGTA...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACCCGCCAGCCAACGTTCCTaGTGGTACTGGATGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRNVSGPENQAPPTPQEPASQRS*WYWMVG Trigger: ACCCACCATCCAGTACCACAAGGAACGTTGGCTGGC...GGGTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS TCA 90 bp | GTGGCTGTTGTCGCGCCTCCGTGCCGCAGCCGCGATCACAGCCCTTaGTTGGCCCGTGGAGTTATTGGTGCTATTTTCCTCTCCGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VAVVAPPCRSRDHSP*LARGVIGAIFLSER Trigger: TCTCTCGGAGAGGAAAATAGCACCAATAACTCCACGGGCCAATCAAGGGCTGTGATCGCGGCTGCGGCACGGAGGCGCGACAACAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCCCCTCGTGGACTCATaGTCCAGCAGGGGTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLPLVDS*SSRGSP Trigger: GGGAGAACCCCTGCTGGACAATGAGTCCACGAGGGG...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCCCCCTCGTGGACTCATaGTCCAGCAGGGGTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGSRTGRNVSGPENQAPPPLVDS*SSRGSP Trigger: GGGAGAACCCCTGCTGGACAATGAGTCCACGAGGGG...GGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCT 60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCTTGGCCAGGACGGACTaGGGCAGGTTGAGGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EQEEVGLAEMCQGQRTKPLARTD*GRLRRA Trigger: CGCCCTCCTCAACCTGCCCAAGTCCGTCCTGGCCAA...GGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGTGGGGAAGAACAGGTCAGTGGGTTCAGAGGGACAAGTGAGGTCAGTGGGATGCAAAGATCGCTaGGGCTGCTTCCCGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRVGKNRSVGSEGQVRSVGCKDR*GCFPGV Trigger: GACCCCCGGGAAGCAGCCCAAGCGATCTTTGCATCC...CACTGACCTCACTTGTCCCTCTGAACCCACTGACCTGTTCTTCCCCACCCTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS TCA 90 bp | GGACTCATTGTCCAGCAGGGGTTCTCCCGGAGCCTGGATCGTCACTaGTTTATCTCCACGACTCCCATCCCGGCTCTTAGAGCGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLIVQQGFSRSLDRH*FISTTPIPALRAVS Trigger: CGACACCGCTCTAAGAGCCGGGATGGGAGTCGTGGAGATAAATCAGTGACGATCCAGGCTCCGGGAGAACCCCTGCTGGACAATGAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 ENSMUST00000138714.2 ENSMUST00000153662.8 |
||
| CDS CCA 90 bp | CCAAGGTCCACTGTTTGGCCAGCCAACGTTCCTTGTGGTACTGGATaGTGGGTCCAGCAGCCAAATATCGCTCCAGGAAGGCCTTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PRSTVWPANVPCGTG*WVQQPNIAPGRPWA Trigger: CGCCCAAGGCCTTCCTGGAGCGATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCGTGGATCGCACGACCTaGAGTGTGAACTGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGSRTGRNVSGPENQAPPVDRTT*SVNWGW Trigger: CCAGCCCCAGTTCACACTCAAGGTCGTGCGATCCAC...GGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCGGATGCAAAGATCGCTaGGGCTGCTTCCCGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QEEVGLAEMCQGQRTKPLGCKDR*GCFPGV Trigger: GACCCCCGGGAAGCAGCCCAAGCGATCTTTGCATCC...GAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGTGGGGAAGAACAGGTCAGTGGGTTCAGAGGGACAAGTGAGGTCAGTGCCATCCTTAAGCCCATaGGTCACCGGCTCCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRVGKNRSVGSEGQVRSVPSLSP*VTGSSL Trigger: GAGCGAGGAGCCGGTGACCAATGGGCTTAAGGATGG...CACTGACCTCACTTGTCCCTCTGAACCCACTGACCTGTTCTTCCCCACCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS CCA 90 bp | CTGTTGTCGCGCCTCCGTGCCGCAGCCGCGATCACAGCCCTTGATTaGCCCGTGGAGTTATTGGTGCTATTTTCCTCTCCGAGAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSRLRAAAAITALD*PVELLVLFSSPREY Trigger: GTATTCTCTCGGAGAGGAAAATAGCACCAATAACTCCACGGGCCAATCAAGGGCTGTGATCGCGGCTGCGGCACGGAGGCGCGACAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS CCA 90 bp | AGGTCCACTGTTTGGCCAGCCAACGTTCCTTGTGGTACTGGATGGTaGGTCCAGCAGCCAAATATCGCTCCAGGAAGGCCTTGGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSTVWPANVPCGTGW*VQQPNIAPGRPWAS Trigger: TGACGCCCAAGGCCTTCCTGGAGCGATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCCGGGGCAGTGAGGCCTaGGGCCGGCGGAAGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTRGSEA*GRRKNR Trigger: TCTGTTCTTCCGCCGGCCCAAGGCCTCACTGCCCCG...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCATCTTGGCCAGGACGGACTaGGGCAGGTTGAGGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KQQQNPLLPTKAMTPITILARTD*GRLRRA Trigger: CGCCCTCCTCAACCTGCCCAAGTCCGTCCTGGCCAA...GATGGTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTAAGCCAGACACTTTCTaGGCCAGGACGGACTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRTGRNVSGPENQAPPTKPDTF*ARTDLG Trigger: GCCCAAGTCCGTCCTGGCCAAGAAAGTGTCTGGCTT...AGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCTACTCATTGTGGCTGTaGTCGCGCCTCCGTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: EQEEVGLAEMCQGQRTKPYSLWL*SRLRAA Trigger: TGCGGCACGGAGGCGCGACAACAGCCACAATGAGTA...GGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCATCCTTAAGCCCATaGGTCACCGGCTCCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QEEVGLAEMCQGQRTKPLPSLSP*VTGSSL Trigger: GAGCGAGGAGCCGGTGACCAATGGGCTTAAGGATGG...GAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CCA 90 bp | CTCACCAAGGTCCACTGTTTGGCCAGCCAACGTTCCTTGTGGTACTaGATGGTGGGTCCAGCAGCCAAATATCGCTCCAGGAAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTKVHCLASQRSLWY*MVGPAAKYRSRKAL Trigger: CAAGGCCTTCCTGGAGCGATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CCA 90 bp | TCCTCGCTCACCAAGGTCCACTGTTTGGCCAGCCAACGTTCCTTGTaGTACTGGATGGTGGGTCCAGCAGCCAAATATCGCTCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLTKVHCLASQRSL*YWMVGPAAKYRSRK Trigger: CTTCCTGGAGCGATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGGTGAGCGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CAA 90 bp | AGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCAGCAGGATGAGCAGCTaGAAGGCCACGGAGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGSRTGRNVSGPENQAPPSRMSS*KATEMK Trigger: CTTCATCTCCGTGGCCTTCAAGCTGCTCATCCTGCT...GGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CAA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCAGCAGGATGAGCAGCTaGAAGGCCACGGAGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLSRMSS*KATEMK Trigger: CTTCATCTCCGTGGCCTTCAAGCTGCTCATCCTGCT...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAAGCAGACGAAGATACCACAGTTCTGACACGAAGGACCAAAACGCTACCACGGGGCAGTGAGGCCTaGGGCCGGCGGAAGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TKADEDTTVLTRRTKTLPRGSEA*GRRKNR Trigger: TCTGTTCTTCCGCCGGCCCAAGGCCTCACTGCCCCG...TGGTAGCGTTTTGGTCCTTCGTGTCAGAACTGTGGTATCTTCGTCTGCTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| CDS-3UTR CAA 90 bp | CAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCGCCAGCCAACGTTCCTaGTGGTACTGGATGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QEEVGLAEMCQGQRTKPLASQRS*WYWMVG Trigger: ACCCACCATCCAGTACCACAAGGAACGTTGGCTGGC...GAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CAA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCCCCCTCGTGGACTCATaGTCCAGCAGGGGTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTPLVDS*SSRGSP Trigger: GGGAGAACCCCTGCTGGACAATGAGTCCACGAGGGG...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCAAGCCAGACACTTTCTaGGCCAGGACGGACTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RARGSRTGRNVSGPENQAKPDTF*ARTDLG Trigger: GCCCAAGTCCGTCCTGGCCAAGAAAGTGTCTGGCTT...GGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCTGGCCCGTGGAGTTATaGGTGCTATTTTCCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RGSRTGRNVSGPENQAPPWPVEL*VLFSSP Trigger: CGGAGAGGAAAATAGCACCAATAACTCCACGGGCCA...GGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCGCTCCAGGAAGGCCTaGGGCGTCATGTCGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QTRARGSRTGRNVSGPENRSRKA*GVMSWV Trigger: TACCCACGACATGACGCCCAAGGCCTTCCTGGAGCG...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CAA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACGTGGATCGCACGACCTaGAGTGTGAACTGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QTRARGSRTGRNVSGPENVDRTT*SVNWGW Trigger: CCAGCCCCAGTTCACACTCAAGGTCGTGCGATCCAC...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CAA 90 bp | AAAAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGTTGGCCAGGACGGACTaGGGCAGGTTGAGGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KNKQEQEEVGLAEMCQGQLARTD*GRLRRA Trigger: CGCCCTCCTCAACCTGCCCAAGTCCGTCCTGGCCAA...CTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CAA 90 bp | CCCAACCAACAGGGAGAGCAGGGACCCAGACAAACAGGGACTAAGAGAATCCTGTGGCCCGTGGAGTTATaGGTGCTATTTTCCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PNQQGEQGPRQTGTKRILWPVEL*VLFSSP Trigger: CGGAGAGGAAAATAGCACCAATAACTCCACGGGCCA...CAGGATTCTCTTAGTCCCTGTTTGTCTGGGTCCCTGCTCTCCCTGTTGGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCTGGCCCGTGGAGTTATaGGTGCTATTTTCCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EQEEVGLAEMCQGQRTKPWPVEL*VLFSSP Trigger: CGGAGAGGAAAATAGCACCAATAACTCCACGGGCCA...GGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCCCATCCTTAAGCCCATaGGTCACCGGCTCCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQEQEEVGLAEMCQGQRTPSLSP*VTGSSL Trigger: GAGCGAGGAGCCGGTGACCAATGGGCTTAAGGATGG...GGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACAAGCCAGACACTTTCTaGGCCAGGACGGACTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTRARGSRTGRNVSGPENKPDTF*ARTDLG Trigger: GCCCAAGTCCGTCCTGGCCAAGAAAGTGTCTGGCTT...GTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGGGATGCAAAGATCGCTaGGGCTGCTTCCCGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KNKQEQEEVGLAEMCQGQGCKDR*GCFPGV Trigger: GACCCCCGGGAAGCAGCCCAAGCGATCTTTGCATCC...CTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCCGCAGGAACACGAACTTATGTGACTaGGGATCCACAAATTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LAEMCQGQRTKPLPLRRNTNLCD*GSTNSS Trigger: TGAGGAATTTGTGGATCCCAAGTCACATAAGTTCGT...GTTCCTGCGGAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS CCA 90 bp | TTGAAGAAGGGCACCTTCTTGGTGCTCACTACCAAGCTGAAGTCCTaGCGCTTCAAGAGGAACACGATGCCATCCTTAAGCCCATTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKKGTFLVLTTKLKS*RFKRNTMPSLSPLV Trigger: GACCAATGGGCTTAAGGATGGCATCGTGTTCCTCTTGAAGCGCCAGGACTTCAGCTTGGTAGTGAGCACCAAGAAGGTGCCCTTCTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGCTGTCCTCCATGTCCTaGGCGATGCGCGTGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KNKQEQEEVGLAEMCQGQLSSMS*AMRVRS Trigger: TGACCTCACGCGCATCGCCAAGGACATGGAGGACAG...CTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACAAACAAGAGCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGGTGGATCGCACGACCTaGAGTGTGAACTGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KNKQEQEEVGLAEMCQGQVDRTT*SVNWGW Trigger: CCAGCCCCAGTTCACACTCAAGGTCGTGCGATCCAC...CTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGCTCTTGTTTGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAGAAAGACACATTACACCTTCCCCACAGCCCTGGTAAAGTGGTCAGAGAGGCCAGCCAACGTTCCTaGTGGTACTGGATGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKKDTLHLPHSPGKVVREASQRS*WYWMVG Trigger: ACCCACCATCCAGTACCACAAGGAACGTTGGCTGGC...CTCTCTGACCACTTTACCAGGGCTGTGGGGAAGGTGTAATGTGTCTTTCTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTCCCACTCAATTCCTCAGAGAGTTaGAAGAAGGGCACCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVGLAEMCQGQRTKPLPLNSSES*KKGTFL Trigger: CAAGAAGGTGCCCTTCTTCAAACTCTCTGAGGAATT...GAGTGGGAGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGGAAGTAGGACTGGCAGAAATGTGTCAGGGCCAGAGAACCAAGCCCCTAATTCCTCAGAGAGTTaGAAGAAGGGCACCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: ARGSRTGRNVSGPENQAPNSSES*KKGTFL Trigger: CAAGAAGGTGCCCTTCTTCAAACTCTCTGAGGAATT...AGGGGCTTGGTTCTCTGGCCCTGACACATTTCTGCCAGTCCTACTTCCTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS-3UTR CAA 90 bp | TCTGCATGTCATGGAGTCCTTAAGAAGTCAACATGTATCCTTCATGGGGAAGGGAGCAGGATGAGCAGCTaGAAGGCCACGGAGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: SACHGVLKKSTCILHGEGSRMSS*KATEMK Trigger: CTTCATCTCCGTGGCCTTCAAGCTGCTCATCCTGCT...CCCTTCCCCATGAAGGATACATGTTGACTTCTTAAGGACTCCATGACATGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| CDS-3UTR CAA 90 bp | CCCAACCAACAGGGAGAGCAGGGACCCAGACAAACAGGGACTAAGAGAATCCTGACGAACTTATGTGACTaGGGATCCACAAATTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: PNQQGEQGPRQTGTKRILTNLCD*GSTNSS Trigger: TGAGGAATTTGTGGATCCCAAGTCACATAAGTTCGT...CAGGATTCTCTTAGTCCCTGTTTGTCTGGGTCCCTGCTCTCCCTGTTGGTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| CDS-3UTR CAA 90 bp | AAGCAACAGCAAAACCCGCTCTTGCCCACAAAGGCAATGACCCCAATCACCATCAATTCCTCAGAGAGTTaGAAGAAGGGCACCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: KQQQNPLLPTKAMTPITINSSES*KKGTFL Trigger: CAAGAAGGTGCCCTTCTTCAAACTCTCTGAGGAATT...GATGGTGATTGGGGTCATTGCCTTTGTGGGCAAGAGCGGGTTTTGCTGTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| CDS-3UTR CAA 90 bp | ACCAAAGCAGACGAAGATACCACAGTTCTGACACGAAGGACCAAAACGCTACCAACGAACTTATGTGACTaGGGATCCACAAATTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: TKADEDTTVLTRRTKTLPTNLCD*GSTNSS Trigger: TGAGGAATTTGTGGATCCCAAGTCACATAAGTTCGT...TGGTAGCGTTTTGGTCCTTCGTGTCAGAACTGTGGTATCTTCGTCTGCTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| CDS GCA 72 bp | GGTGTCGGTCCCGGCGGTCCCTGTGCTTCCGGGAGCTaGGGGAGTGGCCCGACTTGTAGGAATAGCCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: GVGPGGPCASGS*GSGPTCRNSPS Trigger: ACTCGGGCTATTCCTACAAGTCGGGCCACTCCCGCAGCTCCCGGAAGCACAGGGACCGCCGGGACCGACACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 ENSMUST00000138714.2 ENSMUST00000153662.8 |
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| CDS CCA 72 bp | GAGCTCGTAACACGAAGACTCGGGGCAGTGAGGCCTTaGGCCGGCGGAAGAACAGAGCCCAGCTGCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: ELVTRRLGAVRP*AGGRTEPSCPT Trigger: TGTTGGGCAGCTGGGCTCTGTTCTTCCGCCGGCCCAAGGCCTCACTGCCCCGAGTCTTCGTGTTACGAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 72 bp | AGAGCTCGTAACACGAAGACTCGGGGCAGTGAGGCCTaGGGCCGGCGGAAGAACAGAGCCCAGCTGCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: RARNTKTRGSEA*GRRKNRAQLPN Trigger: GTTGGGCAGCTGGGCTCTGTTCTTCCGCCGGCCCAAGGCCTCACTGCCCCGAGTCTTCGTGTTACGAGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 90 bp | CGGCGGAAGAACAGAGCCCAGCTGCCCAACAGCAGGATGAGCAGCTaGAAGGCCACGGAGATGAAGAGGCCCTCACAGGCCGTCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: RRKNRAQLPNSRMSS*KATEMKRPSQAVPH Trigger: GTGTGGGACGGCCTGTGAGGGCCTCTTCATCTCCGTGGCCTTCAAGCTGCTCATCCTGCTGTTGGGCAGCTGGGCTCTGTTCTTCCGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 90 bp | ACCATGAGCAGAGCTCGTAACACGAAGACTCGGGGCAGTGAGGCCTaGGGCCGGCGGAAGAACAGAGCCCAGCTGCCCAACAGCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: TMSRARNTKTRGSEA*GRRKNRAQLPNSRM Trigger: CATCCTGCTGTTGGGCAGCTGGGCTCTGTTCTTCCGCCGGCCCAAGGCCTCACTGCCCCGAGTCTTCGTGTTACGAGCTCTGCTCATGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS GCA 72 bp | CAGGATCCACACTGCCACTCGCTGGATGCAGGCCCCTaGCACCTTCCCAAGGCTGGGTCTGCTACTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: QDPHCHSLDAGP*HLPKAGSATHF Trigger: GAAATGAGTAGCAGACCCAGCCTTGGGAAGGTGGCAGGGGCCTGCATCCAGCGAGTGGCAGTGTGGATCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111264.8 |
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| CDS CCA 72 bp | CGCCTCCGTGCCGCAGCCGCGATCACAGCCCTTGATTaGCCCGTGGAGTTATTGGTGCTATTTTCCTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: RLRAAAAITALD*PVELLVLFSSP Trigger: CGGAGAGGAAAATAGCACCAATAACTCCACGGGCCAATCAAGGGCTGTGATCGCGGCTGCGGCACGGAGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 72 bp | AACAGAGCCCAGCTGCCCAACAGCAGGATGAGCAGCTaGAAGGCCACGGAGATGAAGAGGCCCTCACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: NRAQLPNSRMSS*KATEMKRPSQA Trigger: GGCCTGTGAGGGCCTCTTCATCTCCGTGGCCTTCAAGCTGCTCATCCTGCTGTTGGGCAGCTGGGCTCTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 90 bp | TGTGGCTGTTGTCGCGCCTCCGTGCCGCAGCCGCGATCACAGCCCTaGATTGGCCCGTGGAGTTATTGGTGCTATTTTCCTCTCCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: CGCCRASVPQPRSQP*IGPWSYWCYFPLRE Trigger: CTCTCGGAGAGGAAAATAGCACCAATAACTCCACGGGCCAATCAAGGGCTGTGATCGCGGCTGCGGCACGGAGGCGCGACAACAGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CCA 72 bp | TGGTCACCGGCTCCTCGCTCACCAAGGTCCACTGTTTaGCCAGCCAACGTTCCTTGTGGTACTGGATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: WSPAPRSPRSTV*PANVPCGTGWW Trigger: CCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGGTGAGCGAGGAGCCGGTGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 90 bp | GGCTCCTCGCTCACCAAGGTCCACTGTTTGGCCAGCCAACGTTCCTaGTGGTACTGGATGGTGGGTCCAGCAGCCAAATATCGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSSLTKVHCLASQRS*WYWMVGPAAKYRSR Trigger: CCTGGAGCGATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGGTGAGCGAGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 90 bp | TTAAGCCCATTGGTCACCGGCTCCTCGCTCACCAAGGTCCACTGTTaGGCCAGCCAACGTTCCTTGTGGTACTGGATGGTGGGTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSPLVTGSSLTKVHC*ASQRSLWYWMVGPA Trigger: TGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGGTGAGCGAGGAGCCGGTGACCAATGGGCTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 90 bp | AAGTCCTGGCGCTTCAAGAGGAACACGATGCCATCCTTAAGCCCATaGGTCACCGGCTCCTCGCTCACCAAGGTCCACTGTTTGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: KSWRFKRNTMPSLSP*VTGSSLTKVHCLAS Trigger: GCTGGCCAAACAGTGGACCTTGGTGAGCGAGGAGCCGGTGACCAATGGGCTTAAGGATGGCATCGTGTTCCTCTTGAAGCGCCAGGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS TCA 72 bp | GTCCAGCAGGGGTTCTCCCGGAGCCTGGATCGTCACTaGTTTATCTCCACGACTCCCATCCCGGCTCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: VQQGFSRSLDRH*FISTTPIPALR Trigger: TCTAAGAGCCGGGATGGGAGTCGTGGAGATAAATCAGTGACGATCCAGGCTCCGGGAGAACCCCTGCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 ENSMUST00000138714.2 ENSMUST00000153662.8 |
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| CDS GCA 72 bp | AGGGAAGTCATGGTAATACTTCTCCAGGATCCACACTaGCACTCGCTGGATGCAGGCCCCTGCCACCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: REVMVILLQDPH*HSLDAGPCHLP Trigger: GGGAAGGTGGCAGGGGCCTGCATCCAGCGAGTGGCAGTGTGGATCCTGGAGAAGTATTACCATGACTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111264.8 |
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| CDS CAA 72 bp | GTGGGTCCAGCAGCCAAATATCGCTCCAGGAAGGCCTaGGGCGTCATGTCGTGGGTAATGCAGAACTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VGPAAKYRSRKA*GVMSWVMQNSR Trigger: CCTGGAGTTCTGCATTACCCACGACATGACGCCCAAGGCCTTCCTGGAGCGATATTTGGCTGCTGGACCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 72 bp | TTGGTCACCGGCTCCTCGCTCACCAAGGTCCACTGTTaGGCCAGCCAACGTTCCTTGTGGTACTGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: LVTGSSLTKVHC*ASQRSLWYWMV Trigger: CACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGGTGAGCGAGGAGCCGGTGACCAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CCA 72 bp | GTGGACTCATTGTCCAGCAGGGGTTCTCCCGGAGCCTaGATCGTCACTGATTTATCTCCACGACTCCCATCC | + |
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Preference number: 6 (lower is better) Translates to: VDSLSSRGSPGA*IVTDLSPRLPS Trigger: GGATGGGAGTCGTGGAGATAAATCAGTGACGATCCAGGCTCCGGGAGAACCCCTGCTGGACAATGAGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 ENSMUST00000138714.2 ENSMUST00000153662.8 |
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| CDS CCA 72 bp | GTTTGGCCAGCCAACGTTCCTTGTGGTACTGGATGGTaGGTCCAGCAGCCAAATATCGCTCCAGGAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: VWPANVPCGTGW*VQQPNIAPGRP Trigger: AGGCCTTCCTGGAGCGATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CCA 72 bp | GTCCACTGTTTGGCCAGCCAACGTTCCTTGTGGTACTaGATGGTGGGTCCAGCAGCCAAATATCGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VHCLASQRSLWY*MVGPAAKYRSR Trigger: CCTGGAGCGATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 72 bp | TCTCCGAGAGAATACACCTTGAAGCCAGACACTTTCTaGGCCAGGACGGACTTGGGCAGGTTGAGGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: SPREYTLKPDTF*ARTDLGRLRRA Trigger: CGCCCTCCTCAACCTGCCCAAGTCCGTCCTGGCCAAGAAAGTGTCTGGCTTCAAGGTGTATTCTCTCGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 72 bp | CGCTTCAAGAGGAACACGATGCCATCCTTAAGCCCATaGGTCACCGGCTCCTCGCTCACCAAGGTCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: RFKRNTMPSLSP*VTGSSLTKVHC Trigger: ACAGTGGACCTTGGTGAGCGAGGAGCCGGTGACCAATGGGCTTAAGGATGGCATCGTGTTCCTCTTGAAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 90 bp | CGTGCCGCAGCCGCGATCACAGCCCTTGATTGGCCCGTGGAGTTATaGGTGCTATTTTCCTCTCCGAGAGAATACACCTTGAAGCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: RAAAAITALDWPVEL*VLFSSPREYTLKPD Trigger: GTCTGGCTTCAAGGTGTATTCTCTCGGAGAGGAAAATAGCACCAATAACTCCACGGGCCAATCAAGGGCTGTGATCGCGGCTGCGGCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CCA 72 bp | ACTGTTTGGCCAGCCAACGTTCCTTGTGGTACTGGATaGTGGGTCCAGCAGCCAAATATCGCTCCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: TVWPANVPCGTG*WVQQPNIAPGR Trigger: CCTTCCTGGAGCGATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CCA 72 bp | ACCAAGGTCCACTGTTTGGCCAGCCAACGTTCCTTGTaGTACTGGATGGTGGGTCCAGCAGCCAAATATCGC | + |
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Preference number: 6 (lower is better) Translates to: TKVHCLASQRSL*YWMVGPAAKYR Trigger: GCGATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS GCA 72 bp | TTGGCGATGCGCGTGAGGTCATCATGGGAGATACTGTaGTCAGAAGTGCCCGTGACCACCGTTGTTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LAMRVRSSWEIL*SEVPVTTVVVS Trigger: AGAAACAACAACGGTGGTCACGGGCACTTCTGAGCACAGTATCTCCCATGATGACCTCACGCGCATCGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 ENSMUST00000138714.2 ENSMUST00000153662.8 |
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| CDS CCA 72 bp | GGCACCTTCTTGGTGCTCACTACCAAGCTGAAGTCCTaGCGCTTCAAGAGGAACACGATGCCATCCTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: GTFLVLTTKLKS*RFKRNTMPSLS Trigger: GCTTAAGGATGGCATCGTGTTCCTCTTGAAGCGCCAGGACTTCAGCTTGGTAGTGAGCACCAAGAAGGTGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 72 bp | CTCACCAAGGTCCACTGTTTGGCCAGCCAACGTTCCTaGTGGTACTGGATGGTGGGTCCAGCAGCCAAATAT | + |
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Preference number: 6 (lower is better) Translates to: LTKVHCLASQRS*WYWMVGPAAKY Trigger: ATATTTGGCTGCTGGACCCACCATCCAGTACCACAAGGAACGTTGGCTGGCCAAACAGTGGACCTTGGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 72 bp | GCCGCGATCACAGCCCTTGATTGGCCCGTGGAGTTATaGGTGCTATTTTCCTCTCCGAGAGAATACACCTTG | + |
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Preference number: 6 (lower is better) Translates to: AAITALDWPVEL*VLFSSPREYTL Trigger: CAAGGTGTATTCTCTCGGAGAGGAAAATAGCACCAATAACTCCACGGGCCAATCAAGGGCTGTGATCGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 90 bp | CACACAGAGGTCTCCGACTGCAGCCGCATGACGAACTTATGTGACTaGGGATCCACAAATTCCTCAGAGAGTTTGAAGAAGGGCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: HTEVSDCSRMTNLCD*GSTNSSESLKKGTF Trigger: GAAGGTGCCCTTCTTCAAACTCTCTGAGGAATTTGTGGATCCCAAGTCACATAAGTTCGTCATGCGGCTGCAGTCGGAGACCTCTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS GCA 72 bp | AGGGAAGTCATGGTAATACTTCTCCAGGATCCACACTaGCACTCGCTGGATGCTGAGATGGCCGACATTGTA | + |
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Preference number: 6 (lower is better) Translates to: REVMVILLQDPH*HSLDAEMADIV Trigger: TACAATGTCGGCCATCTCAGCATCCAGCGAGTGGCAGTGTGGATCCTGGAGAAGTATTACCATGACTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 |
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| CDS CAA 90 bp | TTGGGATCCACAAATTCCTCAGAGAGTTTGAAGAAGGGCACCTTCTaGGTGCTCACTACCAAGCTGAAGTCCTGGCGCTTCAAGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LGSTNSSESLKKGTF*VLTTKLKSWRFKRN Trigger: GTTCCTCTTGAAGCGCCAGGACTTCAGCTTGGTAGTGAGCACCAAGAAGGTGCCCTTCTTCAAACTCTCTGAGGAATTTGTGGATCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS TCA 72 bp | AGAGGTCTCCGACTGCAGCCGCATGACGAACTTATGTaGCTTGGGATCCACAAATTCCTCAGAGAGTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGLRLQPHDELM*LGIHKFLREFE Trigger: TTCAAACTCTCTGAGGAATTTGTGGATCCCAAGTCACATAAGTTCGTCATGCGGCTGCAGTCGGAGACCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 72 bp | GTCTCCGACTGCAGCCGCATGACGAACTTATGTGACTaGGGATCCACAAATTCCTCAGAGAGTTTGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSDCSRMTNLCD*GSTNSSESLKK Trigger: CTTCTTCAAACTCTCTGAGGAATTTGTGGATCCCAAGTCACATAAGTTCGTCATGCGGCTGCAGTCGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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| CDS CAA 90 bp | ATGACGAACTTATGTGACTTGGGATCCACAAATTCCTCAGAGAGTTaGAAGAAGGGCACCTTCTTGGTGCTCACTACCAAGCTGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MTNLCDLGSTNSSES*KKGTFLVLTTKLKS Trigger: GGACTTCAGCTTGGTAGTGAGCACCAAGAAGGTGCCCTTCTTCAAACTCTCTGAGGAATTTGTGGATCCCAAGTCACATAAGTTCGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027837.13 ENSMUST00000111263.9 ENSMUST00000111264.8 |
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