Pregenerated sensors for VAMP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028955Ensembl transcript IDs: ENSMUST00000030797.4
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTTGAACAAAACCCCCTTCCTGGAATCCACAACAAGTCATCTTaGGTGACAACATCCACCTCCATTCAGCACTCAGAACTACACAAG | + |
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Preference number: 1 (lower is better) Translates to: CLEQNPLPGIHNKSS*VTTSTSIQHSELHK Trigger: CTTGTGTAGTTCTGAGTGCTGAATGGAGGTGGATGTTGTCACTCAAGATGACTTGTTGTGGATTCCAGGAAGGGGGTTTTGTTCAAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR TCA 90 bp | TTGAACAAAACCCCCTTCCTGGAATCCACAACAAGTCATCTTGAGTaGCAACATCCACCTCCATTCAGCACTCAGAACTACACAAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LNKTPFLESTTSHLE*QHPPPFSTQNYTSP Trigger: AGGACTTGTGTAGTTCTGAGTGCTGAATGGAGGTGGATGTTGTCACTCAAGATGACTTGTTGTGGATTCCAGGAAGGGGGTTTTGTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR TCA 90 bp | ACTAGCCTTCTCTATAGCATTTCACAGGATGGACTGCCGACATGTTaGAGGCTCGCTCTCACAGTATTAACATTTTTCTTAAAGGACACC | + |
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Preference number: 1 (lower is better) Translates to: TSLLYSISQDGLPTC*RLALTVLTFFLKDT Trigger: GGTGTCCTTTAAGAAAAATGTTAATACTGTGAGAGCGAGCCTTCAACATGTCGGCAGTCCATCCTGTGAAATGCTATAGAGAAGGCTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR TCA 90 bp | AAACTAGAACCAGTTGGGCGTTGGTGGCACACGCCTTTAATCCCTGCACTTGGGAGACTGATGCCTTGGTaGGGCTGCACGGCTACTGCT | + |
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Preference number: 2 (lower is better) Translates to: KLEPVGRWWHTPLIPALGRLMPW*GCTATA Trigger: AGCAGTAGCCGTGCAGCCTCACCAAGGCATCAGTCT...CCCAAGTGCAGGGATTAAAGGCGTGTGCCACCAACGCCCAACTGGTTCTAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR TCA 90 bp | AAACTAGAACCAGTTGGGCGTTGGTGGCACACGCCTTTAATCCCTGCACTTGGGGAACTCTGTGCAGACTaGTGCCTTGGTGAGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: KLEPVGRWWHTPLIPALGELCAD*CLGEAA Trigger: TGCAGCCTCACCAAGGCATCAGTCTGCACAGAGTTC...CCCAAGTGCAGGGATTAAAGGCGTGTGCCACCAACGCCCAACTGGTTCTAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTTTGAGTTCGAGCCAGCCTGGTCTACAATCTTGTCTACAGGTGTaGTCTGAGCCCACCTCCATA | + |
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Preference number: 2 (lower is better) Translates to: TWEAEAGGFLSSSQPGLQSCLQV*SEPTSI Trigger: TATGGAGGTGGGCTCAGATCACACCTGTAGACAAGA...TTGTAGACCAGGCTGGCTCGAACTCAAAAATCCGCCTGCCTCTGCCTCCCAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR TCA 90 bp | GTTAATACAGGAGCCACTGAGTTACATGGGACAGAATATGAGGAGACAGCACCAAATTCCACCCATGCCTaGACTCCTGTCTTTGAACCA | + |
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Preference number: 2 (lower is better) Translates to: VNTGATELHGTEYEETAPNSTHA*TPVFEP Trigger: TGGTTCAAAGACAGGAGTTCAGGCATGGGTGGAATT...TGGTGCTGTCTCCTCATATTCTGTCCCATGTAACTCAGTGGCTCCTGTATTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR TCA 90 bp | GTTAATACAGGAGCCACTGAGTTACATGGGACAGAATATGAGGAGACAGCACCAACAAGTCATCTTGAGTaGCAACATCCACCTCCATTC | + |
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Preference number: 2 (lower is better) Translates to: VNTGATELHGTEYEETAPTSHLE*QHPPPF Trigger: GAATGGAGGTGGATGTTGTCACTCAAGATGACTTGT...TGGTGCTGTCTCCTCATATTCTGTCCCATGTAACTCAGTGGCTCCTGTATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR TCA 90 bp | GATGCGGCAAGGCATATCTTCAACATCTGTATTGTTTCAGTAATGTTAGGGGAATCTAACATAAGAGCATaGGCTCTTCACCAGCATCTT | + |
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Preference number: 2 (lower is better) Translates to: DAARHIFNICIVSVMLGESNIRA*ALHQHL Trigger: AAGATGCTGGTGAAGAGCTCATGCTCTTATGTTAGA...TTCCCCTAACATTACTGAAACAATACAGATGTTGAAGATATGCCTTGCCGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR TCA 90 bp | GATGCGGCAAGGCATATCTTCAACATCTGTATTGTTTCAGTAATGTTAGGGGAAGAAACCAAATCAGAATaGCTAGCCTTCTCTATAGCA | + |
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Preference number: 2 (lower is better) Translates to: DAARHIFNICIVSVMLGEETKSE*LAFSIA Trigger: TGCTATAGAGAAGGCTAGTCATTCTGATTTGGTTTC...TTCCCCTAACATTACTGAAACAATACAGATGTTGAAGATATGCCTTGCCGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR CCA 90 bp | GATGCGGCAAGGCATATCTTCAACATCTGTATTGTTTCAGTAATGTTAGGGGAACAGTCTACAAACTGCTaGCTAAGTATCTTGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: DAARHIFNICIVSVMLGEQSTNC*LSILST Trigger: TGTAGACAAGATACTTAGCCAGCAGTTTGTAGACTG...TTCCCCTAACATTACTGAAACAATACAGATGTTGAAGATATGCCTTGCCGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR TCA 90 bp | TTGAAGGCTCGCTCTCACAGTATTAACATTTTTCTTAAAGGACACCTTGAGTTACATTTGGCACTTATTTaGATGTATCTATTGGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LKARSHSINIFLKGHLELHLALI*MYLLGQ Trigger: TTGCCCCAATAGATACATTCAAATAAGTGCCAAATG...TAACTCAAGGTGTCCTTTAAGAAAAATGTTAATACTGTGAGAGCGAGCCTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR TCA 72 bp | CAAGCAGTACACAGTCTTCTGGAACTCTGTGCAGACTaGTGCCTTGGTGAGGCTGCACGGCTACTGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: QAVHSLLELCAD*CLGEAARLLLT Trigger: TGTGAGCAGTAGCCGTGCAGCCTCACCAAGGCATCAGTCTGCACAGAGTTCCAGAAGACTGTGTACTGCTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTTTGAGTTCGAGCCAGCCTGGTCTACAACCTGAACTCCTGTCTTaGAACCAAGCCTTGATGAAA | + |
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Preference number: 3 (lower is better) Translates to: TWEAEAGGFLSSSQPGLQPELLS*NQALMK Trigger: TTTCATCAAGGCTTGGTTCAAAGACAGGAGTTCAGG...TTGTAGACCAGGCTGGCTCGAACTCAAAAATCCGCCTGCCTCTGCCTCCCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTTTGAGTTCGAGCCAGCCTGGTCTACAAACATTTGGCACTTATTaGAATGTATCTATTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: TWEAEAGGFLSSSQPGLQTFGTY*NVSIGA Trigger: TGCCCCAATAGATACATTCAAATAAGTGCCAAATGT...TTGTAGACCAGGCTGGCTCGAACTCAAAAATCCGCCTGCCTCTGCCTCCCAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR TCA 72 bp | CAAAACCCCCTTCCTGGAATCCACAACAAGTCATCTTaGGTGACAACATCCACCTCCATTCAGCACTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: QNPLPGIHNKSS*VTTSTSIQHSE Trigger: TTCTGAGTGCTGAATGGAGGTGGATGTTGTCACTCAAGATGACTTGTTGTGGATTCCAGGAAGGGGGTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR TCA 72 bp | AGTGACCGGTGGCTTACCTCAAGCATAAGACAGAGATaGGTACAAGCAGTACACAGTCTTCTGGAACTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SDRWLTSSIRQR*VQAVHSLLELC Trigger: ACAGAGTTCCAGAAGACTGTGTACTGCTTGTACTCATCTCTGTCTTATGCTTGAGGTAAGCCACCGGTCACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR CAA 90 bp | GATGCGGCAAGGCATATCTTCAACATCTGTATTGTTTCAGTAATGTTAGGGGAAAGGCACACCCTGCTATaGTCACCCATTGCTGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: DAARHIFNICIVSVMLGERHTLL*SPIAVR Trigger: CCTAACAGCAATGGGTGACAATAGCAGGGTGTGCCT...TTCCCCTAACATTACTGAAACAATACAGATGTTGAAGATATGCCTTGCCGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR TCA 72 bp | AACTGCTGGCTAAGTATCTTGTCTACAGGTGTGATCTaGGCCCACCTCCATAGCTCTAAAGAAGAAACCAAA | + |
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Preference number: 3 (lower is better) Translates to: NCWLSILSTGVI*AHLHSSKEETK Trigger: TTTGGTTTCTTCTTTAGAGCTATGGAGGTGGGCTCAGATCACACCTGTAGACAAGATACTTAGCCAGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR-3UTR CAA 90 bp | GTTAATACAGGAGCCACTGAGTTACATGGGACAGAATATGAGGAGACAGCACCATTCTTAAAGGACACCTaGAGTTACATTTGGCACTTA | + |
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Preference number: 3 (lower is better) Translates to: VNTGATELHGTEYEETAPFLKDT*SYIWHL Trigger: TAAGTGCCAAATGTAACTCAAGGTGTCCTTTAAGAA...TGGTGCTGTCTCCTCATATTCTGTCCCATGTAACTCAGTGGCTCCTGTATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR TCA 72 bp | CTCTATAGCATTTCACAGGATGGACTGCCGACATGTTaGAGGCTCGCTCTCACAGTATTAACATTTTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: LYSISQDGLPTC*RLALTVLTFFL Trigger: TAAGAAAAATGTTAATACTGTGAGAGCGAGCCTTCAACATGTCGGCAGTCCATCCTGTGAAATGCTATAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR GCA 90 bp | AAACTAGAACCAGTTGGGCGTTGGTGGCACACGCCTTTAATCCCTGCACTTGGGTGCGAGGCACCTGCCTaGAGTGCATCTGCGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KLEPVGRWWHTPLIPALGCEAPA*SASARS Trigger: TGACCGCGCAGATGCACTGCAGGCAGGTGCCTCGCA...CCCAAGTGCAGGGATTAAAGGCGTGTGCCACCAACGCCCAACTGGTTCTAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR TCA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTTTGAGTTCGAGCCAGCCTGGTCTACAAACCACCTCATCTACTTaGTTTTGTGTCTGCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TWEAEAGGFLSSSQPGLQTTSST*FCVCWS Trigger: ACTCCAGCAGACACAAAATCAAGTAGATGAGGTGGT...TTGTAGACCAGGCTGGCTCGAACTCAAAAATCCGCCTGCCTCTGCCTCCCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR CCA 90 bp | CATGAGCTCTTCACCAGCATCTTAAATACAGCGGGAGTCAGTAGTGCTTACAAATTCGATTACTGCCAGTaGCAGCACTTGACCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: HELFTSILNTAGVSSAYKFDYCQ*QHLTPK Trigger: CTTCGGGGTCAAGTGCTGCCACTGGCAGTAATCGAA...TTTGTAAGCACTACTGACTCCCGCTGTATTTAAGATGCTGGTGAAGAGCTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR CAA 72 bp | ACAAAACCCCCTTCCTGGAATCCACAACAAGTCATCTaGAGTGACAACATCCACCTCCATTCAGCACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: TKPPSWNPQQVI*SDNIHLHSALR Trigger: TCTGAGTGCTGAATGGAGGTGGATGTTGTCACTCAAGATGACTTGTTGTGGATTCCAGGAAGGGGGTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR CCA 90 bp | CATGAGCTCTTCACCAGCATCTTAAATACAGCGGGAGTCAGTAGTGCTTACAAAAGCTCCGAGAGCTTCTaGTCTCTTTCTAACACCTTA | + |
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Preference number: 4 (lower is better) Translates to: HELFTSILNTAGVSSAYKSSESF*SLSNTL Trigger: TAAGGTGTTAGAAAGAGACCAGAAGCTCTCGGAGCT...TTTGTAAGCACTACTGACTCCCGCTGTATTTAAGATGCTGGTGAAGAGCTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR GCA 90 bp | TTGAAGGCTCGCTCTCACAGTATTAACATTTTTCTTAAAGGACACCTTGAGTTAGGAGTCTTCGATTACTaGCAGTGGCAGCACTTGACC | + |
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Preference number: 4 (lower is better) Translates to: LKARSHSINIFLKGHLELGVFDY*QWQHLT Trigger: GGTCAAGTGCTGCCACTGGCAGTAATCGAAGACTCC...TAACTCAAGGTGTCCTTTAAGAAAAATGTTAATACTGTGAGAGCGAGCCTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR GCA 90 bp | TTGAAGGCTCGCTCTCACAGTATTAACATTTTTCTTAAAGGACACCTTGAGTTAGCACTTGTTTCAAACTaGGAGGCACCTGCCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LKARSHSINIFLKGHLELALVSN*EAPACS Trigger: ACTGCAGGCAGGTGCCTCGCAGTTTGAAACAAGTGC...TAACTCAAGGTGTCCTTTAAGAAAAATGTTAATACTGTGAGAGCGAGCCTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| 3UTR CAA 72 bp | ACTTCCTCAATTCCACCCATGCCTGAACTCCTGTCTTaGAACCAAGCCTTGATGAAAGTCTCATATAAACAA | + |
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Preference number: 4 (lower is better) Translates to: TSSIPPMPELLS*NQALMKVSYKQ Trigger: TTGTTTATATGAGACTTTCATCAAGGCTTGGTTCAAAGACAGGAGTTCAGGCATGGGTGGAATTGAGGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTTTGAGTTCGAGCCAGCCTGGTCTACAATCAACTTGGCAGCACTaGTTTCAAACTGCGAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: TWEAEAGGFLSSSQPGLQSTWQH*FQTARH Trigger: GTGCCTCGCAGTTTGAAACAAGTGCTGCCAAGTTGA...TTGTAGACCAGGCTGGCTCGAACTCAAAAATCCGCCTGCCTCTGCCTCCCAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTTTGAGTTCGAGCCAGCCTGGTCTACAATACTTTCTCTTCAACTaGGCAGCACTTGTTTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: TWEAEAGGFLSSSQPGLQYFLFN*AALVSN Trigger: GTTTGAAACAAGTGCTGCCAAGTTGAAGAGAAAGTA...TTGTAGACCAGGCTGGCTCGAACTCAAAAATCCGCCTGCCTCTGCCTCCCAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR CAA 90 bp | CACTGTGCAAAATGTGGGGAGGGTAGGTCACACCTCCAGTTTGGAGTGTATATGCTCATCTACTTGATTTaGTGTCTGCTGGAGTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: HCAKCGEGRSHLQFGVYMLIYLI*CLLESS Trigger: CGAAGACTCCAGCAGACACAAAATCAAGTAGATGAG...CATATACACTCCAAACTGGAGGTGTGACCTACCCTCCCCACATTTTGCACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS-3UTR CAA 90 bp | CACTGTGCAAAATGTGGGGAGGGTAGGTCACACCTCCAGTTTGGAGTGTATATGAACCACCTCATCTACTaGATTTTGTGTCTGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: HCAKCGEGRSHLQFGVYMNHLIY*ILCLLE Trigger: CTCCAGCAGACACAAAATCAAGTAGATGAGGTGGTT...CATATACACTCCAAACTGGAGGTGTGACCTACCCTCCCCACATTTTGCACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS GCA 72 bp | CTACTTGATTTTGTGTCTGCTGGAGTCTTCGATTACTaGCAGTGGCAGCACTTGACCCCGAAGGCACACCTG | + |
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Preference number: 6 (lower is better) Translates to: LLDFVSAGVFDY*QWQHLTPKAHL Trigger: CAGGTGTGCCTTCGGGGTCAAGTGCTGCCACTGGCAGTAATCGAAGACTCCAGCAGACACAAAATCAAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS CCA 72 bp | AGTGCATCTGCGCGGTCATCTAGCTCCGAGAGCTTCTaGTCTCTTTCTAACACCTTATCCACATTGACTCTC | + |
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Preference number: 6 (lower is better) Translates to: SASARSSSSESF*SLSNTLSTLTL Trigger: GAGAGTCAATGTGGATAAGGTGTTAGAAAGAGACCAGAAGCTCTCGGAGCTAGATGACCGCGCAGATGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS CAA 72 bp | GACTCTCATGATGTCAACCACCTCATCTACTTGATTTaGTGTCTGCTGGAGTCTTCGATTACTGCCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: DSHDVNHLIYLI*CLLESSITASG Trigger: GCCACTGGCAGTAATCGAAGACTCCAGCAGACACAAAATCAAGTAGATGAGGTGGTTGACATCATGAGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS CAA 72 bp | CACATTGACTCTCATGATGTCAACCACCTCATCTACTaGATTTTGTGTCTGCTGGAGTCTTCGATTACTGCC | + |
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Preference number: 6 (lower is better) Translates to: HIDSHDVNHLIY*ILCLLESSITA Trigger: GGCAGTAATCGAAGACTCCAGCAGACACAAAATCAAGTAGATGAGGTGGTTGACATCATGAGAGTCAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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| CDS TCA 72 bp | ACATTGACTCTCATGATGTCAACCACCTCATCTACTTaGTTTTGTGTCTGCTGGAGTCTTCGATTACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TLTLMMSTTSST*FCVCWSLRLLP Trigger: TGGCAGTAATCGAAGACTCCAGCAGACACAAAATCAAGTAGATGAGGTGGTTGACATCATGAGAGTCAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030797.4 |
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