Pregenerated sensors for VAMP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030337Ensembl transcript IDs: ENSMUST00000032487.14, ENSMUST00000063588.11, ENSMUST00000100942.9, ENSMUST00000205223.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAAGGCTGCTGCGTGGGAAGTGGACCCCCGGCCTAGCACGGCCCTaGCTCCTCCAGTTTGTGGACCAGAGCACAGAAGGAATAGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: ERLLRGKWTPGLARP*LLQFVDQSTEGIEV Trigger: GACCTCTATTCCTTCTGTGCTCTGGTCCACAAACTGGAGGAGGCAGGGCCGTGCTAGGCCGGGGGTCCACTTCCCACGCAGCAGCCTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR CCA 90 bp | CGTGCTGGGGCTGGGTGGGCCAACAGGGAACATACGCTCCAGGCTTaGGACACACCAAGGACAGTGTTGCTTCTTCTCCAGAGATGGCTC | + |
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Preference number: 1 (lower is better) Translates to: RAGAGWANREHTLQA*DTPRTVLLLLQRWL Trigger: GAGCCATCTCTGGAGAAGAAGCAACACTGTCCTTGGTGTGTCCCAAGCCTGGAGCGTATGTTCCCTGTTGGCCCACCCAGCCCCAGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR CCA 90 bp | AGGCAAAGGGAAGCCCAGAGCAGAGTGGAGACCTTCGGGGGACATTaGGAGGCTACACTGACTGCTTTCTTCCAGCTCTTCAGCCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: RQREAQSRVETFGGH*EATLTAFFQLFSPA Trigger: GGCAGGGCTGAAGAGCTGGAAGAAAGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGTCTCCACTCTGCTCTGGGCTTCCCTTTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR GCA 90 bp | CAGCCAGGGATGCAGCTCACGGCCTGGCCTCAGCCCCCAACTCATTaGCCTCATCTTCCTTCCGTCTTGCAAATCAGCAATGAGTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: QPGMQLTAWPQPPTH*PHLPSVLQISNESS Trigger: TGAGGACTCATTGCTGATTTGCAAGACGGAAGGAAGATGAGGGCAATGAGTTGGGGGCTGAGGCCAGGCCGTGAGCTGCATCCCTGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| 3UTR GCA 90 bp | ATGTCAAGTACCATGGCTGGGGACAGCACTGAATCCAGAGGCAGCTaGCAAGGCGCTGTCAGCAAGCACTGTCCAGAGCTTCGCTTACCC | + |
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Preference number: 1 (lower is better) Translates to: MSSTMAGDSTESRGS*QGAVSKHCPELRLP Trigger: GGGTAAGCGAAGCTCTGGACAGTGCTTGCTGACAGCGCCTTGGCAGCTGCCTCTGGATTCAGTGCTGTCCCCAGCCATGGTACTTGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| 3UTR CCA 90 bp | GCTCTTCAGCCCTGCCCTGAGGCAGCACGAAGGGAAGGTGGAAAATaGGCCAAGGGAAAGGAAGGATCGATGGCTCTGCAGAACGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: ALQPCPEAARREGGK*AKGKEGSMALQNER Trigger: CCTTTCGTTCTGCAGAGCCATCGATCCTTCCTTTCCCTTGGCCCATTTTCCACCTTCCCTTCGTGCTGCCTCAGGGCAGGGCTGAAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR TCA 90 bp | CTAACATCAGAAAGGAATGTCAAGTACCATGGCTGGGGACAGCACTaGATCCAGAGGCAGCTGCCAAGGCGCTGTCAGCAAGCACTGTCC | + |
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Preference number: 1 (lower is better) Translates to: LTSERNVKYHGWGQH*IQRQLPRRCQQALS Trigger: GGACAGTGCTTGCTGACAGCGCCTTGGCAGCTGCCTCTGGATTCAGTGCTGTCCCCAGCCATGGTACTTGACATTCCTTTCTGATGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| 3UTR GCA 90 bp | AACTCTTTTAAGCTCCAGGCACACGATAAATGGGTAAGGAGGAGGTaGCAGCCGTTGTCTTCGGGTAGTGACTTCAGGACTGGACCACGA | + |
|
Preference number: 1 (lower is better) Translates to: NSFKLQAHDKWVRRR*QPLSSGSDFRTGPR Trigger: TCGTGGTCCAGTCCTGAAGTCACTACCCGAAGACAACGGCTGGCACCTCCTCCTTACCCATTTATCGTGTGCCTGGAGCTTAAAAGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR GCA 90 bp | AGACAGACTGTGCAGCTCCTATCCTCGGCTCCAACAAACACAGCATaGAAAGGGAGTGAAAGACAGGAGGCAATGCAGAATGGATGGGCA | + |
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Preference number: 1 (lower is better) Translates to: RQTVQLLSSAPTNTA*KGSERQEAMQNGWA Trigger: TGCCCATCCATTCTGCATTGCCTCCTGTCTTTCACTCCCTTTGCATGCTGTGTTTGTTGGAGCCGAGGATAGGAGCTGCACAGTCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR GCA 90 bp | ATATACACATGCACTGGCAGCAAGCTACTACTTCCCAACTATTCTTaGTCCCCTCCTGCCAAAGGCCAGCCTTTCTTGGAGACACCATGG | + |
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Preference number: 1 (lower is better) Translates to: IYTCTGSKLLLPNYS*SPPAKGQPFLETPW Trigger: CCATGGTGTCTCCAAGAAAGGCTGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGTAGTAGCTTGCTGCCAGTGCATGTGTATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR GCA 90 bp | GATAGTTCTGGGTTATATAGAAAGCAGGTTGAGCAAGCCAGTAAGTaGTGTCCCCCTGTGATCTCTGCTTCAGTTCCTGCCTCCAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: DSSGLYRKQVEQASK*CPPVISASVPASRF Trigger: GAACCTGGAGGCAGGAACTGAAGCAGAGATCACAGGGGGACAGCACTTACTGGCTTGCTCAACCTGCTTTCTATATAACCCAGAACTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| 3UTR TCA 90 bp | TATATAGAAAGCAGGTTGAGCAAGCCAGTAAGTGCTGTCCCCCTGTaGTCTCTGCTTCAGTTCCTGCCTCCAGGTTCTGTAAGTCAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: YIESRLSKPVSAVPL*SLLQFLPPGSVSQK Trigger: CTTCTGACTTACAGAACCTGGAGGCAGGAACTGAAGCAGAGATCACAGGGGGACAGCACTTACTGGCTTGCTCAACCTGCTTTCTATATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| 3UTR TCA 90 bp | ATCCCATGGCAAACAAAGAGGAGATGTGGGAAGCTTGGCTTCAACTaGCTGCAAAGTCCCAGGGTTAGCTGCATATTTGCTCATGCACAT | + |
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Preference number: 1 (lower is better) Translates to: IPWQTKRRCGKLGFN*LQSPRVSCIFAHAH Trigger: ATGTGCATGAGCAAATATGCAGCTAACCCTGGGACTTTGCAGTCAGTTGAAGCCAAGCTTCCCACATCTCCTCTTTGTTTGCCATGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR TCA 90 bp | CATGCCTTTGGTGGAAGTACAACTCTTACTACTATACATAAACTGTaGGACTGGGTTAGGAAAGAGACAGAGGTAATGACAGACACGATG | + |
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Preference number: 1 (lower is better) Translates to: HAFGGSTTLTTIHKL*DWVRKETEVMTDTM Trigger: CATCGTGTCTGTCATTACCTCTGTCTCTTTCCTAACCCAGTCTCACAGTTTATGTATAGTAGTAAGAGTTGTACTTCCACCAAAGGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR TCA 90 bp | AATCAAGTCAATGTTGTGGTAGGAATTTGTATTTTTCGCCTTTGTTaGGAATACATGAGATTGGTAAATATGTCACATGCCTTTGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: NQVNVVVGICIFRLC*EYMRLVNMSHAFGG Trigger: TCCACCAAAGGCATGTGACATATTTACCAATCTCATGTATTCTCAACAAAGGCGAAAAATACAAATTCCTACCACAACATTGACTTGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032487.14 |
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| 3UTR-3UTR TCA 90 bp | AGTGGCAGGCAGCTGCGGATGCGAGGCCCATGCCGCACAGCAGCGCAACGGCACCCTCCTATCCAAAACTaGGCTGCGGGATCAGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SGRQLRMRGPCRTAAQRHPPIQN*AAGSVD Trigger: GTCCACTGATCCCGCAGCTCAGTTTTGGATAGGAGG...GTGCCGTTGCGCTGCTGTGCGGCATGGGCCTCGCATCCGCAGCTGCCTGCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCAGGCAGCTGCGGATGCGAGGCCCATGCCGCACAGCAGCGCAACGGCACGAGCTTGGGTGGCAATaGAGAACAGGGAAGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: SGRQLRMRGPCRTAAQRHELGWQ*RTGKGW Trigger: CCATCCCTTCCCTGTTCTCCATTGCCACCCAAGCTC...GTGCCGTTGCGCTGCTGTGCGGCATGGGCCTCGCATCCGCAGCTGCCTGCCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR TCA 90 bp | CGAAAGGCTGCTGCGTGGGAAGTGGACCCCCGGCCTAGCACGGCCCTGCCTCCTGATGGAGGAGTTTGTTaGGAAAGCAAACAGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RKAAAWEVDPRPSTALPPDGGVC*ESKQRG Trigger: TCCCCTCTGTTTGCTTTCTCAACAAACTCCTCCATC...AGGAGGCAGGGCCGTGCTAGGCCGGGGGTCCACTTCCCACGCAGCAGCCTTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGCGTGGGAAGTGGACCCCCGGCCTAGCACGGCCCTGCCTCCTCCAGTTTGTCACACCAACACAGCCTaGACCCTCCTATCCAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: AAWEVDPRPSTALPPPVCHTNTA*TLLSKT Trigger: AGTTTTGGATAGGAGGGTCCAGGCTGTGTTGGTGTG...ACAAACTGGAGGAGGCAGGGCCGTGCTAGGCCGGGGGTCCACTTCCCACGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR CAA 90 bp | CCGTGCTGGGGCTGGGTGGGCCAACAGGGAACATACGCTCCAGGCTaGGGACACACCAAGGACAGTGTTGCTTCTTCTCCAGAGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: PCWGWVGQQGTYAPG*GHTKDSVASSPEMA Trigger: AGCCATCTCTGGAGAAGAAGCAACACTGTCCTTGGTGTGTCCCAAGCCTGGAGCGTATGTTCCCTGTTGGCCCACCCAGCCCCAGCACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGGCAGGCAGCTGCGGATGCGAGGCCCATGCCGCACAGCAGCGCAACGGCACAAGCCCCTGATTCCCTaGAATTATTTGGTGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SGRQLRMRGPCRTAAQRHKPLIP*NYLVPS Trigger: TGAAGGCACCAAATAATTTCAGGGAATCAGGGGCTT...GTGCCGTTGCGCTGCTGTGCGGCATGGGCCTCGCATCCGCAGCTGCCTGCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCAAGCTACTACTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAGGCAGGCAGGCAGGGCTaGGAGAAGTCTCCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: GSKLLLPNYSCSPPAKGQAGRQG*EKSPGP Trigger: AGGTCCTGGAGACTTCTCCCAGCCCTGCCTGCCTGC...CTGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGTAGTAGCTTGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100942.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGCGTGGGAAGTGGACCCCCGGCCTAGCACGGCCCTGCCTCCTCCAGTTTGTATGTGCATATACACATaGACTGGCAGCAAGCTACTA | + |
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Preference number: 2 (lower is better) Translates to: AAWEVDPRPSTALPPPVCMCIYT*TGSKLL Trigger: TAGTAGCTTGCTGCCAGTGCATGTGTATATGCACAT...ACAAACTGGAGGAGGCAGGGCCGTGCTAGGCCGGGGGTCCACTTCCCACGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR GCA 90 bp | TCCTATCCTCGGCTCCAACAAACACAGCATGCAAAGGGAGTGAAAGACAGGAGGAGAGTGGCAGGCAGCTaGGGATGCGAGGCCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: SYPRLQQTQHAKGVKDRRRVAGS*GCEAHA Trigger: GGCATGGGCCTCGCATCCGCAGCTGCCTGCCACTCT...CCTCCTGTCTTTCACTCCCTTTGCATGCTGTGTTTGTTGGAGCCGAGGATAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGGGTGGGCCAACAGGGAACATACGCTCCAGGCTTGGGACACACCAAGGAAAAGACAGGAGGCAATaGAGAATGGATGGGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: GLGGPTGNIRSRLGTHQGKDRRQ*RMDGHS Trigger: GCTGTGCCCATCCATTCTGCATTGCCTCCTGTCTTT...TCCTTGGTGTGTCCCAAGCCTGGAGCGTATGTTCCCTGTTGGCCCACCCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAGGGCCTCAAAACAGCACCTGCTGTAGCCTTGCTCCTGCTGTCACCACACAGCCCCCAACTCATTaGCCTCATCTTCCTTCCGTC | + |
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Preference number: 2 (lower is better) Translates to: PRGPQNSTCCSLAPAVTTQPPTH*PHLPSV Trigger: GACGGAAGGAAGATGAGGGCAATGAGTTGGGGGCTG...TGTGGTGACAGCAGGAGCAAGGCTACAGCAGGTGCTGTTTTGAGGCCCTCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| 3UTR-3UTR CCA 90 bp | CCCCGGCCTAGCACGGCCCTGCCTCCTCCAGTTTGTGGACCAGAGCACAGAAGGATGGAGAACGGAGGATaGAGGAGTTTGTTGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PRPSTALPPPVCGPEHRRMENGG*RSLLRK Trigger: CTTTCTCAACAAACTCCTCCATCCTCCGTTCTCCAT...CCTTCTGTGCTCTGGTCCACAAACTGGAGGAGGCAGGGCCGTGCTAGGCCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCAAAACAGCACCTGCTGTAGCCTTGCTCCTGCTGTCACCACAGTCAGATAGTGCTGTCCCCCTGTaGTCTCTGCTTCAGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GLKTAPAVALLLLSPQSDSAVPL*SLLQFL Trigger: CAGGAACTGAAGCAGAGATCACAGGGGGACAGCACT...ATCTGACTGTGGTGACAGCAGGAGCAAGGCTACAGCAGGTGCTGTTTTGAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| 3UTR CAA 90 bp | AAGCTCCAGGCACACGATAAATGGGTAAGGAGGAGGTGCCAGCCGTaGTCTTCGGGTAGTGACTTCAGGACTGGACCACGAGCAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: KLQAHDKWVRRRCQP*SSGSDFRTGPRAAF Trigger: AAATGCTGCTCGTGGTCCAGTCCTGAAGTCACTACCCGAAGACAACGGCTGGCACCTCCTCCTTACCCATTTATCGTGTGCCTGGAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR CAA 90 bp | AACAGGGAACATACGCTCCAGGCTTGGGACACACCAAGGACAGTGTaGCTTCTTCTCCAGAGATGGCTCCCTGCACTAGGCAAAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NREHTLQAWDTPRTV*LLLQRWLPALGKGK Trigger: CTTCCCTTTGCCTAGTGCAGGGAGCCATCTCTGGAGAAGAAGCAACACTGTCCTTGGTGTGTCCCAAGCCTGGAGCGTATGTTCCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGATGTGGGAAGCTTGGCTTCAACTGACTGCAAAGTCCCAGGGTTAGCTGCAAGAGGGGAAGAGACATaGGCTTGGGTGGCAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: GDVGSLASTDCKVPGLAARGEET*AWVAME Trigger: CTCCATTGCCACCCAAGCTCATGTCTCTTCCCCTCT...TGCAGCTAACCCTGGGACTTTGCAGTCAGTTGAAGCCAAGCTTCCCACATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGATGTGGGAAGCTTGGCTTCAACTGACTGCAAAGTCCCAGGGTTAGCTGCATGTTCTGTGGCAGCCTaGGAGTCTTGCCATGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GDVGSLASTDCKVPGLAACSVAA*ESCHAA Trigger: AGCTGCATGGCAAGACTCCCAGGCTGCCACAGAACA...TGCAGCTAACCCTGGGACTTTGCAGTCAGTTGAAGCCAAGCTTCCCACATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAGCCTTTCTTGGAGACCCCCAAGGTCTCCCTTaGACCCAAGCTAGTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: TSQLFLLPSCQRPAFLGDPQGLP*TQASGK Trigger: TTTGCCACTAGCTTGGGTCCAAGGGAGACCTTGGGG...GTCTCCAAGAAAGGCTGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100942.9 |
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| 3UTR CAA 90 bp | CTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAGCCTTTCTaGGAGACACCATGGACACAAATACCCTTCTCCTCCCCTCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: LPNYSCSPPAKGQPF*ETPWTQIPFSSPQL Trigger: TAGCTGAGGGGAGGAGAAGGGTATTTGTGTCCATGGTGTCTCCAAGAAAGGCTGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGATGTGGGAAGCTTGGCTTCAACTGACTGCAAAGTCCCAGGGTTAGCTGCAGCAGCCTGGGAGTCTTaGCATGCAGCTCTCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: GDVGSLASTDCKVPGLAAAAWES*HAALIS Trigger: AGAAATGAGAGCTGCATGGCAAGACTCCCAGGCTGC...TGCAGCTAACCCTGGGACTTTGCAGTCAGTTGAAGCCAAGCTTCCCACATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGAGACAGAGGTAATGACAGACACGATGGAAGCCCCACATCATCCCATGAAGCCTGGGCCAGGATaGAGAACGGAGGATGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: RKETEVMTDTMEAPHHPMKPGPG*RTEDGG Trigger: TCCTCCATCCTCCGTTCTCCATCCTGGCCCAGGCTT...CATGGGATGATGTGGGGCTTCCATCGTGTCTGTCATTACCTCTGTCTCTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAGCTACTACTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAGCCGATGGAGGAGTTTGTTaGGAAAGCAAACAGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QQATTSQLFLLPSCQRPADGGVC*ESKQRG Trigger: TCCCCTCTGTTTGCTTTCTCAACAAACTCCTCCATC...GGCTGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGTAGTAGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGAGACAGAGGTAATGACAGACACGATGGAAGCCCCACATCATCCCATGACCTTCGGGGGACATTaGGAGGCTACACTGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: RKETEVMTDTMEAPHHPMTFGGH*EATLTA Trigger: AGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGT...CATGGGATGATGTGGGGCTTCCATCGTGTCTGTCATTACCTCTGTCTCTTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGAGTGAAAGACAGGAGGCAATGCAGAATGGATGGGCACAGCGGCTGCAGAAGCCCCTGATTCCCTaGAATTATTTGGTGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KGSERQEAMQNGWAQRLQKPLIP*NYLVPS Trigger: TGAAGGCACCAAATAATTTCAGGGAATCAGGGGCTT...CTGCAGCCGCTGTGCCCATCCATTCTGCATTGCCTCCTGTCTTTCACTCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR TCA 90 bp | GATGGAAGCCCCACATCATCCCATGGCAAACAAAGAGGAGATGTGGGAAGCTTGATTGGGAGGCTACACTaGCTGCTTTCTTCCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: DGSPTSSHGKQRGDVGSLIGRLH*LLSSSS Trigger: AGAGCTGGAAGAAAGCAGTCAGTGTAGCCTCCCAAT...CAAGCTTCCCACATCTCCTCTTTGTTTGCCATGGGATGATGTGGGGCTTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTATCCTCGGCTCCAACAAACACAGCATGCAAAGGGAGTGAAAGACAGGAGGCACACCAACACAGCCTaGACCCTCCTATCCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: SYPRLQQTQHAKGVKDRRHTNTA*TLLSKT Trigger: AGTTTTGGATAGGAGGGTCCAGGCTGTGTTGGTGTG...CCTCCTGTCTTTCACTCCCTTTGCATGCTGTGTTTGTTGGAGCCGAGGATAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGAATACACACATCAGCCCTTCTGGCCTAGAGCCAACATAGGACACCACCTTAAGCCCAGAGCAGAGTaGAGACCTTCGGGGGACATT | + |
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Preference number: 2 (lower is better) Translates to: KEYTHQPFWPRANIGHHLKPRAE*RPSGDI Trigger: AATGTCCCCCGAAGGTCTCCACTCTGCTCTGGGCTT...AAGGTGGTGTCCTATGTTGGCTCTAGGCCAGAAGGGCTGATGTGTGTATTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032487.14 |
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| 3UTR CAA 90 bp | AGCCCCACATCATCCCATGGCAAACAAAGAGGAGATGTGGGAAGCTaGGCTTCAACTGACTGCAAAGTCCCAGGGTTAGCTGCATATTTG | + |
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Preference number: 2 (lower is better) Translates to: SPTSSHGKQRGDVGS*ASTDCKVPGLAAYL Trigger: CAAATATGCAGCTAACCCTGGGACTTTGCAGTCAGTTGAAGCCAAGCTTCCCACATCTCCTCTTTGTTTGCCATGGGATGATGTGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR TCA 90 bp | GATGGAAGCCCCACATCATCCCATGGCAAACAAAGAGGAGATGTGGGAAGCTTGAGCTCTCATTTCTCGTaGTCAACAACAAGGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: DGSPTSSHGKQRGDVGSLSSHFS*STTREG Trigger: TCCCTCCCTTGTTGTTGATCACGAGAAATGAGAGCT...CAAGCTTCCCACATCTCCTCTTTGTTTGCCATGGGATGATGTGGGGCTTCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGGTGGAAGTACAACTCTTACTACTATACATAAACTGTGAGACTGGGTTACCGTCTCCATACCTCTaGAGAGCGGCCCCACTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: PLVEVQLLLLYINCETGLPSPYL*RAAPLP Trigger: GGGGAGTGGGGCCGCTCTGCAGAGGTATGGAGACGG...TAACCCAGTCTCACAGTTTATGTATAGTAGTAAGAGTTGTACTTCCACCAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCTCGTGATCAACAACAAGGGAGGGACAGGCCTTTCATTAGTGAGATGGCAGAGCTTGGGTGGCAATaGAGAACAGGGAAGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: ISRDQQQGRDRPFISEMAELGWQ*RTGKGW Trigger: CCATCCCTTCCCTGTTCTCCATTGCCACCCAAGCTC...TGCCATCTCACTAATGAAAGGCCTGTCCCTCCCTTGTTGTTGATCACGAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGTGCATATACACATGCACTGGCAGCAAGCTACTACTTCCCAACTATTCTTGGGTCATGGAGAAGCCTaGGCCAGGATGGAGAACGGA | + |
|
Preference number: 2 (lower is better) Translates to: HVHIHMHWQQATTSQLFLGHGEA*ARMENG Trigger: TCCGTTCTCCATCCTGGCCCAGGCTTCTCCATGACC...CAAGAATAGTTGGGAAGTAGTAGCTTGCTGCCAGTGCATGTGTATATGCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTCTCATTTCTCGTGATCAACAACAAGGGAGGGACAGGCCTTTCATTAGTGTAAAGGAAGGGTCATaGAGAAGCCTGGGCCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: AALISRDQQQGRDRPFISVKEGS*RSLGQD Trigger: ATCCTGGCCCAGGCTTCTCCATGACCCTTCCTTTAC...ACTAATGAAAGGCCTGTCCCTCCCTTGTTGTTGATCACGAGAAATGAGAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCCCCACATCATCCCATGGCAAACAAAGAGGAGATGTGGGAAGCTTGGCTTACATACAGGGTAGTGTaGAGGAAAGTGTTCTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: EAPHHPMANKEEMWEAWLTYRVV*RKVFCG Trigger: GCCACAGAACACTTTCCTCCACACTACCCTGTATGT...AAGCCAAGCTTCCCACATCTCCTCTTTGTTTGCCATGGGATGATGTGGGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAGAGACAGAGGTAATGACAGACACGATGGAAGCCCCACATCATCCCATGAGCACGAAGGGAAGGTaGAAAATGGGCCAAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RKETEVMTDTMEAPHHPMSTKGR*KMGQGK Trigger: TTTCCCTTGGCCCATTTTCCACCTTCCCTTCGTGCT...CATGGGATGATGTGGGGCTTCCATCGTGTCTGTCATTACCTCTGTCTCTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR GCA 90 bp | CATGCAGCTCTCATTTCTCGTGATCAACAACAAGGGAGGGACAGGCCTTTCATTAAAGACAGGAGGCAATaGAGAATGGATGGGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: HAALISRDQQQGRDRPFIKDRRQ*RMDGHS Trigger: GCTGTGCCCATCCATTCTGCATTGCCTCCTGTCTTT...AATGAAAGGCCTGTCCCTCCCTTGTTGTTGATCACGAGAAATGAGAGCTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | CACGATGGAAGCCCCACATCATCCCATGGCAAACAAAGAGGAGATGTGGGAAGCCACCTAAGCCTTAGATaGACAGAAACCCAGGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: HDGSPTSSHGKQRGDVGSHLSLR*TETQEI Trigger: TATTTCCTGGGTTTCTGTCCATCTAAGGCTTAGGTG...GCTTCCCACATCTCCTCTTTGTTTGCCATGGGATGATGTGGGGCTTCCATCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR GCA 90 bp | CATGTGCATATACACATGCACTGGCAGCAAGCTACTACTTCCCAACTATTCTTGTTCTTGCTCCCCTCCTaGCAAAGGCCAGCCTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: HVHIHMHWQQATTSQLFLFLLPS*QRPAFL Trigger: AAGAAAGGCTGGCCTTTGGCAGGAGGGGAGCAAGAA...CAAGAATAGTTGGGAAGTAGTAGCTTGCTGCCAGTGCATGTGTATATGCACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR GCA 90 bp | AACACAGCATGCAAAGGGAGTGAAAGACAGGAGGCAATGCAGAATGGATGGGCACCAACAAACACAGCATaGAAAGGGAGTGAAAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: NTACKGSERQEAMQNGWAPTNTA*KGSERQ Trigger: CTGTCTTTCACTCCCTTTGCATGCTGTGTTTGTTGG...TGCCCATCCATTCTGCATTGCCTCCTGTCTTTCACTCCCTTTGCATGCTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGAGGGACAGGCCTTTCATTAGTGAGATGGCAAGAAGCACACTCCTGAAAATGGAGAACGGAGGATaGAGGAGTTTGTTGAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QGRDRPFISEMARSTLLKMENGG*RSLLRK Trigger: CTTTCTCAACAAACTCCTCCATCCTCCGTTCTCCAT...TTTCAGGAGTGTGCTTCTTGCCATCTCACTAATGAAAGGCCTGTCCCTCCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGCAAGCTACTACTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAGCCAAGGTAAGAGTGTCCTaGTGTTTTTACAACCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QQATTSQLFLLPSCQRPAKVRVS*CFYNQK Trigger: TTTCTGGTTGTAAAAACACCAGGACACTCTTACCTT...GGCTGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGTAGTAGCTTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTCTCATTTCTCGTGATCAACAACAAGGGAGGGACAGGCCTTTCATTAGTACATACAGGGTAGTGTaGAGGAAAGTGTTCTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: AALISRDQQQGRDRPFISTYRVV*RKVFCG Trigger: GCCACAGAACACTTTCCTCCACACTACCCTGTATGT...ACTAATGAAAGGCCTGTCCCTCCCTTGTTGTTGATCACGAGAAATGAGAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR TCA 90 bp | AACACAGCATGCAAAGGGAGTGAAAGACAGGAGGCAATGCAGAATGGATGGGCAATCAAATGCTTCAGGTaGCATGAAGAGAAGCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: NTACKGSERQEAMQNGWAIKCFR*HEEKHV Trigger: CACATGCTTCTCTTCATGTCACCTGAAGCATTTGAT...TGCCCATCCATTCTGCATTGCCTCCTGTCTTTCACTCCCTTTGCATGCTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGGGAATCTAAACAAAGAGCCGGAACCTACTCAACAATTCAGAAGCTCAGCTGCCCAGCAGAGCTGTaGACCTCTTTAATCCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LRESKQRAGTYSTIQKLSCPAEL*TSLIPS Trigger: GCTTGGGATTAAAGAGGTGCACAGCTCTGCTGGGCA...GCTGAGCTTCTGAATTGTTGAGTAGGTTCCGGCTCTTTGTTTAGATTCCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR-3UTR GCA 90 bp | GCACTGTCCAGAGCTTCGCTTACCCAGAGTCTGAGAAAGAAAACCGTTAGAGCTGCTTGTTTGTTCTTCTaGTTCCACTTGAGACCACTT | + |
|
Preference number: 2 (lower is better) Translates to: ALSRASLTQSLRKKTVRAACLFF*FHLRPL Trigger: AAGTGGTCTCAAGTGGAAGCAGAAGAACAAACAAGC...AGCTCTAACGGTTTTCTTTCTCAGACTCTGGGTAAGCGAAGCTCTGGACAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR-3UTR CCA 90 bp | ATTTTCCAAGCCCCTGATTCCCTGAAATTATTTGGTGCCTTCATGAATAACATCGGTCATGGAGAAGCCTaGGCCAGGATGGAGAACGGA | + |
|
Preference number: 2 (lower is better) Translates to: IFQAPDSLKLFGAFMNNIGHGEA*ARMENG Trigger: TCCGTTCTCCATCCTGGCCCAGGCTTCTCCATGACC...GATGTTATTCATGAAGGCACCAAATAATTTCAGGGAATCAGGGGCTTGGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTCCAAGCCCCTGATTCCCTGAAATTATTTGGTGCCTTCATGAATAACATCAGAGGGGAAGAGACATaGGCTTGGGTGGCAATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: IFQAPDSLKLFGAFMNNIRGEET*AWVAME Trigger: CTCCATTGCCACCCAAGCTCATGTCTCTTCCCCTCT...GATGTTATTCATGAAGGCACCAAATAATTTCAGGGAATCAGGGGCTTGGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR TCA 90 bp | AACACAGCATGCAAAGGGAGTGAAAGACAGGAGGCAATGCAGAATGGATGGGCACAGAAAATCCTGTACTaGCATGTAAAGAGTAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: NTACKGSERQEAMQNGWAQKILY*HVKSSY Trigger: GTAGCTACTCTTTACATGTCAGTACAGGATTTTCTG...TGCCCATCCATTCTGCATTGCCTCCTGTCTTTCACTCCCTTTGCATGCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGGGAATCTAAACAAAGAGCCGGAACCTACTCAACAATTCAGAAGCTCAGCAAACGTAACACAGTGTaGGCAGTGTGGTCGCTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRESKQRAGTYSTIQKLSKRNTV*AVWSLE Trigger: CTCTAGCGACCACACTGCCCACACTGTGTTACGTTT...GCTGAGCTTCTGAATTGTTGAGTAGGTTCCGGCTCTTTGTTTAGATTCCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR CAA 90 bp | CTTCCGTCTTGCAAATCAGCAATGAGTCCTCATATGACTGCTTGTTaGTTCTTCTGCTTCCACTTGAGACCACTTAATATGCCCAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LPSCKSAMSPHMTAC*FFCFHLRPLNMPSR Trigger: TCTGCTGGGCATATTAAGTGGTCTCAAGTGGAAGCAGAAGAACAAACAAGCAGTCATATGAGGACTCATTGCTGATTTGCAAGACGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTGGTGGAAGTACAACTCTTACTACTATACATAAACTGTGAGACTGGGTTATTCTTGCTCCCCTCCTaGCAAAGGCCAGCCTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PLVEVQLLLLYINCETGLFLLPS*QRPAFL Trigger: AAGAAAGGCTGGCCTTTGGCAGGAGGGGAGCAAGAA...TAACCCAGTCTCACAGTTTATGTATAGTAGTAAGAGTTGTACTTCCACCAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTGTCCTGGTGTTTTTACAACCAGAAAGTACGCCTTTCCTAGGCCTACAGAGAATGTGCATATACACATaGACTGGCAGCAAGCTACTA | + |
|
Preference number: 2 (lower is better) Translates to: SVLVFLQPESTPFLGLQRMCIYT*TGSKLL Trigger: TAGTAGCTTGCTGCCAGTGCATGTGTATATGCACAT...TCTCTGTAGGCCTAGGAAAGGCGTACTTTCTGGTTGTAAAAACACCAGGACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTGGTGGAAGTACAACTCTTACTACTATACATAAACTGTGAGACTGGGTTAGAAGGGGGTTCAGGGTaGGGTGAGATAGAAAGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PLVEVQLLLLYINCETGLEGGSG*GEIESR Trigger: TCTACTTTCTATCTCACCTCACCCTGAACCCCCTTC...TAACCCAGTCTCACAGTTTATGTATAGTAGTAAGAGTTGTACTTCCACCAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTGGTGGAAGTACAACTCTTACTACTATACATAAACTGTGAGACTGGGTTAGGAGGCTACACTGACTaGTTTCTTCCAGCTCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PLVEVQLLLLYINCETGLGGYTD*FLPALQ Trigger: CTGAAGAGCTGGAAGAAAGCAGTCAGTGTAGCCTCC...TAACCCAGTCTCACAGTTTATGTATAGTAGTAAGAGTTGTACTTCCACCAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CAA 90 bp | CCAGCACAGCCCAAACAACAATCAAGTCAATGTTGTGGTAGGAATTaGTATTTTTCGCCTTTGTTGAGAATACATGAGATTGGTAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: PAQPKQQSSQCCGRN*YFSPLLRIHEIGKY Trigger: ATATTTACCAATCTCATGTATTCTCAACAAAGGCGAAAAATACAAATTCCTACCACAACATTGACTTGATTGTTGTTTGGGCTGTGCTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032487.14 |
||
| 3UTR CCA 72 bp | TGGGCACAGCGGCTGCAGGGAGAACTAACGGAAGAGTaGCAGGCAGCTGCGGATGCGAGGCCCATGCCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: WAQRLQGELTEE*QAAADARPMPH Trigger: GTGCGGCATGGGCCTCGCATCCGCAGCTGCCTGCCACTCTTCCGTTAGTTCTCCCTGCAGCCGCTGTGCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CCA 72 bp | ACTCCCCAGGCAGGCAGGCAGGCAGGCAGGCAGGGCTaGGAGAAGTCTCCAGGACCTTCCCACCTCTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: TPQAGRQAGRQG*EKSPGPSHLFT Trigger: GGTGAAGAGGTGGGAAGGTCCTGGAGACTTCTCCCAGCCCTGCCTGCCTGCCTGCCTGCCTGCCTGGGGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | GCTGCAGGGAGAACTAACGGAAGAGTGGCAGGCAGCTaGGGATGCGAGGCCCATGCCGCACAGCAGCGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: AAGRTNGRVAGS*GCEAHAAQQRN Trigger: GTTGCGCTGCTGTGCGGCATGGGCCTCGCATCCGCAGCTGCCTGCCACTCTTCCGTTAGTTCTCCCTGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | CTGCGTGGGAAGTGGACCCCCGGCCTAGCACGGCCCTaGCTCCTCCAGTTTGTGGACCAGAGCACAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LRGKWTPGLARP*LLQFVDQSTEG Trigger: TCCTTCTGTGCTCTGGTCCACAAACTGGAGGAGGCAGGGCCGTGCTAGGCCGGGGGTCCACTTCCCACGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CCA 72 bp | AGGATCGATGGCTCTGCAGAACGAAAGGCTGCTGCGTaGGAAGTGGACCCCCGGCCTAGCACGGCCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RIDGSAERKAAA*EVDPRPSTALP Trigger: AGGCAGGGCCGTGCTAGGCCGGGGGTCCACTTCCCACGCAGCAGCCTTTCGTTCTGCAGAGCCATCGATCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGGCAGCTGCGGATGCGAGGCCCATGCCGCACAGCAGCGCAACGGCACACGCCCCCTCCTTCCCTTaGGCCACAACTCTTTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: WQAAADARPMPHSSATAHAPSFP*ATTLLS Trigger: GCTTAAAAGAGTTGTGGCCAAAGGGAAGGAGGGGGC...GTGTGCCGTTGCGCTGCTGTGCGGCATGGGCCTCGCATCCGCAGCTGCCTGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CCA 72 bp | TGCCGCACAGCAGCGCAACGGCACACCAACACAGCCTaGACCCTCCTATCCAAAACTGAGCTGCGGGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: CRTAAQRHTNTA*TLLSKTELRDQ Trigger: CTGATCCCGCAGCTCAGTTTTGGATAGGAGGGTCCAGGCTGTGTTGGTGTGCCGTTGCGCTGCTGTGCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | ACCATGGCTGGGGACAGCACTGAATCCAGAGGCAGCTaGCAAGGCGCTGTCAGCAAGCACTGTCCAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TMAGDSTESRGS*QGAVSKHCPEL Trigger: AAGCTCTGGACAGTGCTTGCTGACAGCGCCTTGGCAGCTGCCTCTGGATTCAGTGCTGTCCCCAGCCATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR CCA 72 bp | GCTGGGTGGGCCAACAGGGAACATACGCTCCAGGCTTaGGACACACCAAGGACAGTGTTGCTTCTTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AGWANREHTLQA*DTPRTVLLLLQ Trigger: CTGGAGAAGAAGCAACACTGTCCTTGGTGTGTCCCAAGCCTGGAGCGTATGTTCCCTGTTGGCCCACCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CCA 72 bp | AGAAACCCAGGAAATAATTCCCGTGCTGGGGCTGGGTaGGCCAACAGGGAACATACGCTCCAGGCTTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RNPGNNSRAGAG*ANREHTLQAWD Trigger: GTCCCAAGCCTGGAGCGTATGTTCCCTGTTGGCCCACCCAGCCCCAGCACGGGAATTATTTCCTGGGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | CCCTCAGCTATGCTAACTTCTCAGACACTTCACCTCTaGCATTCCCGGCCCCCTCCTTCCCTTTGGCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: PSAMLTSQTLHL*HSRPPPSLWPQ Trigger: TTGTGGCCAAAGGGAAGGAGGGGGCCGGGAATGGCAGAGGTGAAGTGTCTGAGAAGTTAGCATAGCTGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | GAAAATGGGCCAAGGGAAAGGAAGGATCGATGGCTCTaGAGAACGAAAGGCTGCTGCGTGGGAAGTGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: ENGPRERKDRWL*RTKGCCVGSGP Trigger: GGGTCCACTTCCCACGCAGCAGCCTTTCGTTCTGCAGAGCCATCGATCCTTCCTTTCCCTTGGCCCATTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CCA 72 bp | GAAGCCCAGAGCAGAGTGGAGACCTTCGGGGGACATTaGGAGGCTACACTGACTGCTTTCTTCCAGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EAQSRVETFGGH*EATLTAFFQLF Trigger: GAAGAGCTGGAAGAAAGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGTCTCCACTCTGCTCTGGGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGATGTGGGAAGCTTGGCTTCAACTGACTGCAAAGTCCCAGGGTTAGCTGCACCTGCCTCCTCCAGTTaGTGGACCAGAGCACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GDVGSLASTDCKVPGLAAPASSS*WTRAQK Trigger: CTTCTGTGCTCTGGTCCACAAACTGGAGGAGGCAGG...TGCAGCTAACCCTGGGACTTTGCAGTCAGTTGAAGCCAAGCTTCCCACATCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR TCA 72 bp | GAAAGGAATGTCAAGTACCATGGCTGGGGACAGCACTaGATCCAGAGGCAGCTGCCAAGGCGCTGTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ERNVKYHGWGQH*IQRQLPRRCQQ Trigger: TTGCTGACAGCGCCTTGGCAGCTGCCTCTGGATTCAGTGCTGTCCCCAGCCATGGTACTTGACATTCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR GCA 72 bp | ATGCAGCTCACGGCCTGGCCTCAGCCCCCAACTCATTaGCCTCATCTTCCTTCCGTCTTGCAAATCAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: MQLTAWPQPPTH*PHLPSVLQISN Trigger: ATTGCTGATTTGCAAGACGGAAGGAAGATGAGGGCAATGAGTTGGGGGCTGAGGCCAGGCCGTGAGCTGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR CCA 72 bp | TGGACCCTCCTATCCAAAACTGAGCTGCGGGATCAGTaGACTTCTCTAACTCTGGAAAGGCCCTCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: WTLLSKTELRDQ*TSLTLERPSCL Trigger: GAGGCAGGAGGGCCTTTCCAGAGTTAGAGAAGTCCACTGATCCCGCAGCTCAGTTTTGGATAGGAGGGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAGCTACTACTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAGCCGGAAGAGACATGAGCTaGGGTGGCAATGGAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: QQATTSQLFLLPSCQRPAGRDMS*GGNGEQ Trigger: CTGTTCTCCATTGCCACCCAAGCTCATGTCTCTTCC...GGCTGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGTAGTAGCTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGCCAACAGGGAACATACGCTCCAGGCTTGGGACACACCAAGGACAGTGTGGAGGATGGAGGAGTTaGTTGAGAAAGCAAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GGPTGNIRSRLGTHQGQCGGWRS*LRKQTE Trigger: CTCTGTTTGCTTTCTCAACAAACTCCTCCATCCTCC...ACACTGTCCTTGGTGTGTCCCAAGCCTGGAGCGTATGTTCCCTGTTGGCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGCAAGCTACTACTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAGCCCCCTCCTTCCCTTaGGCCACAACTCTTTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: WQQATTSQLFLLPSCQRPAPSFP*ATTLLS Trigger: GCTTAAAAGAGTTGTGGCCAAAGGGAAGGAGGGGGC...TGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGTAGTAGCTTGCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGATGTGGGAAGCTTGGCTTCAACTGACTGCAAAGTCCCAGGGTTAGCTGCAAGAGGTCTGAGAACATaGCCCTCCTCTTCCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: GDVGSLASTDCKVPGLAARGLRT*PSSSHP Trigger: AGGGTGGGAAGAGGAGGGCAATGTTCTCAGACCTCT...TGCAGCTAACCCTGGGACTTTGCAGTCAGTTGAAGCCAAGCTTCCCACATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR TCA 72 bp | GCACACCAACACAGCCTGGACCCTCCTATCCAAAACTaGGCTGCGGGATCAGTGGACTTCTCTAACTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AHQHSLDPPIQN*AAGSVDFSNSG Trigger: TCCAGAGTTAGAGAAGTCCACTGATCCCGCAGCTCAGTTTTGGATAGGAGGGTCCAGGCTGTGTTGGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | TGCACTGGCAGCAAGCTACTACTTCCCAACTATTCTTaGTCCCCTCCTGCCAAAGGCCAGCCTTTCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CTGSKLLLPNYS*SPPAKGQPFLE Trigger: CTCCAAGAAAGGCTGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGTAGTAGCTTGCTGCCAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CCA 72 bp | GCCCCACATCATCCCATGGCAAACAAAGAGGAGATGTaGGAAGCTTGGCTTCAACTGACTGCAAAGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: APHHPMANKEEM*EAWLQLTAKSQ Trigger: CTGGGACTTTGCAGTCAGTTGAAGCCAAGCTTCCCACATCTCCTCTTTGTTTGCCATGGGATGATGTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCTATCCTCGGCTCCAACAAACACAGCATGCAAAGGGAGTGAAAGACAGGAGGGGAAGAGACATGAGCTaGGGTGGCAATGGAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SYPRLQQTQHAKGVKDRRGRDMS*GGNGEQ Trigger: CTGTTCTCCATTGCCACCCAAGCTCATGTCTCTTCC...CCTCCTGTCTTTCACTCCCTTTGCATGCTGTGTTTGTTGGAGCCGAGGATAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGGAGTGAAAGACAGGAGGCAATGCAGAATGGATGGGCACAGCGGCTGCAGGGAGGATGGAGGAGTTaGTTGAGAAAGCAAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KGSERQEAMQNGWAQRLQGGWRS*LRKQTE Trigger: CTCTGTTTGCTTTCTCAACAAACTCCTCCATCCTCC...CTGCAGCCGCTGTGCCCATCCATTCTGCATTGCCTCCTGTCTTTCACTCCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTCTCATTTCTCGTGATCAACAACAAGGGAGGGACAGGCCTTTCATTAGTGGCAGCCTGGGAGTCTaGCCATGCAGCTCTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: AALISRDQQQGRDRPFISGSLGV*PCSSHF Trigger: GAAATGAGAGCTGCATGGCAAGACTCCCAGGCTGCC...ACTAATGAAAGGCCTGTCCCTCCCTTGTTGTTGATCACGAGAAATGAGAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGCAAGCTACTACTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAGGAATGTCCTTGTTTTaGCCCTTCCTCCCTCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WQQATTSQLFLLPSCQRPGMSLF*PFLPPK Trigger: TTTGGGAGGGAGGAAGGGCAAAAACAAGGACATTCC...TGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGTAGTAGCTTGCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGAGGGACAGGCCTTTCATTAGTGAGATGGCAAGAAGCACACTCCTGAAAACTTCCCAACTATTCTaGCTCCCCTCCTGCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QGRDRPFISEMARSTLLKTSQLF*LPSCQR Trigger: CCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGT...TTTCAGGAGTGTGCTTCTTGCCATCTCACTAATGAAAGGCCTGTCCCTCCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | GTGCAGCTCCTATCCTCGGCTCCAACAAACACAGCATaGAAAGGGAGTGAAAGACAGGAGGCAATGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VQLLSSAPTNTA*KGSERQEAMQN Trigger: ATTCTGCATTGCCTCCTGTCTTTCACTCCCTTTGCATGCTGTGTTTGTTGGAGCCGAGGATAGGAGCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | GGGTTATATAGAAAGCAGGTTGAGCAAGCCAGTAAGTaGTGTCCCCCTGTGATCTCTGCTTCAGTTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GLYRKQVEQASK*CPPVISASVPA Trigger: GGCAGGAACTGAAGCAGAGATCACAGGGGGACAGCACTTACTGGCTTGCTCAACCTGCTTTCTATATAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGAGGGACAGGCCTTTCATTAGTGAGATGGCAAGAAGCACACTCCTGAAAAAAGGCCAGCCTTTCTaGGAGACACCATGGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: QGRDRPFISEMARSTLLKKGQPF*ETPWTQ Trigger: TTGTGTCCATGGTGTCTCCAAGAAAGGCTGGCCTTT...TTTCAGGAGTGTGCTTCTTGCCATCTCACTAATGAAAGGCCTGTCCCTCCCTTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | GATGGCAAGAAGCACACTCCTGAAAGCTTGTTATTTTCCAAGCCCCTGATTCCCACTTCCCAACTATTCTaGCTCCCCTCCTGCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DGKKHTPESLLFSKPLIPTSQLF*LPSCQR Trigger: CCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGT...GGGAATCAGGGGCTTGGAAAATAACAAGCTTTCAGGAGTGTGCTTCTTGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | TGTGGAGGAAAGTGTTCTGTGGCAGCCTGGGAGTCTTaGCATGCAGCTCTCATTTCTCGTGATCAACAACAA | + |
|
Preference number: 3 (lower is better) Translates to: CGGKCSVAAWES*HAALISRDQQQ Trigger: TTGTTGTTGATCACGAGAAATGAGAGCTGCATGGCAAGACTCCCAGGCTGCCACAGAACACTTTCCTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CCA 72 bp | TGTTACATACAGGGTAGTGTGGAGGAAAGTGTTCTGTaGCAGCCTGGGAGTCTTGCCATGCAGCTCTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: CYIQGSVEESVL*QPGSLAMQLSF Trigger: AAATGAGAGCTGCATGGCAAGACTCCCAGGCTGCCACAGAACACTTTCCTCCACACTACCCTGTATGTAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAGCACCTGCTGTAGCCTTGCTCCTGCTGTCACCACAGTCAGATGTGAAGTTCTTCTGCTTCCACTaGAGACCACTTAATATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KTAPAVALLLLSPQSDVKFFCFH*RPLNMP Trigger: GGGCATATTAAGTGGTCTCAAGTGGAAGCAGAAGAA...CTTCACATCTGACTGTGGTGACAGCAGGAGCAAGGCTACAGCAGGTGCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR-3UTR CAA 90 bp | CACGATGGAAGCCCCACATCATCCCATGGCAAACAAAGAGGAGATGTGGGAAGCAAAAGGGATTTGAAGTaGGTCTTTAAACAGACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HDGSPTSSHGKQRGDVGSKRDLK*VFKQTS Trigger: AGAGGTCTGTTTAAAGACCAACTTCAAATCCCTTTT...GCTTCCCACATCTCCTCTTTGTTTGCCATGGGATGATGTGGGGCTTCCATCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTCGTGATCAACAACAAGGGAGGGACAGGCCTTTCATTAGTGAGATGGCACATCAAGGAATGTCCTaGTTTTTGCCCTTCCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ISRDQQQGRDRPFISEMAHQGMS*FLPFLP Trigger: AGGGAGGAAGGGCAAAAACAAGGACATTCCTTGATG...TGCCATCTCACTAATGAAAGGCCTGTCCCTCCCTTGTTGTTGATCACGAGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100942.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAATACACACATCAGCCCTTCTGGCCTAGAGCCAACATAGGACACCACCTTGCAGCATTTCTAGTTTaGAGGAAGGGTGCAAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: KEYTHQPFWPRANIGHHLAAFLV*RKGANE Trigger: TTCATTTGCACCCTTCCTCAAAACTAGAAATGCTGC...AAGGTGGTGTCCTATGTTGGCTCTAGGCCAGAAGGGCTGATGTGTGTATTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032487.14 |
||
| 3UTR GCA 72 bp | TCCGTCTTGCAAATCAGCAATGAGTCCTCATATGACTaGTTGTTTGTTCTTCTGCTTCCACTTGAGACCACT | + |
|
Preference number: 3 (lower is better) Translates to: SVLQISNESSYD*LFVLLLPLETT Trigger: AGTGGTCTCAAGTGGAAGCAGAAGAACAAACAAGCAGTCATATGAGGACTCATTGCTGATTTGCAAGACGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR-3UTR CAA 90 bp | GGGAATCTAAACAAAGAGCCGGAACCTACTCAACAATTCAGAAGCTCAGCCATTCATATGACTGCTTGTTaGTTCTTCTGCTTCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: GNLNKEPEPTQQFRSSAIHMTAC*FFCFHL Trigger: CAAGTGGAAGCAGAAGAACAAACAAGCAGTCATATG...AATGGCTGAGCTTCTGAATTGTTGAGTAGGTTCCGGCTCTTTGTTTAGATTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR TCA 72 bp | TTTGGTGCCTTCATGAATAACATCAAATGCTTCAGGTaGCATGAAGAGAAGCATGTGGGATGGCTTCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FGAFMNNIKCFR*HEEKHVGWLLG Trigger: TCCTAGAAGCCATCCCACATGCTTCTCTTCATGTCACCTGAAGCATTTGATGTTATTCATGAAGGCACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR TCA 72 bp | GGTGGAAGTACAACTCTTACTACTATACATAAACTGTaGGACTGGGTTAGGAAAGAGACAGAGGTAATGACA | + |
|
Preference number: 3 (lower is better) Translates to: GGSTTLTTIHKL*DWVRKETEVMT Trigger: TGTCATTACCTCTGTCTCTTTCCTAACCCAGTCTCACAGTTTATGTATAGTAGTAAGAGTTGTACTTCCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR GCA 72 bp | TTGTTGAGAATACATGAGATTGGTAAATATGTCACATaGCTTTGGTGGAAGTACAACTCTTACTACTATACA | + |
|
Preference number: 3 (lower is better) Translates to: LLRIHEIGKYVT*LWWKYNSYYYT Trigger: TGTATAGTAGTAAGAGTTGTACTTCCACCAAAGGCATGTGACATATTTACCAATCTCATGTATTCTCAACAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR CCA 90 bp | AGTGGCAGGCAGCTGCGGATGCGAGGCCCATGCCGCACAGCAGCGCAACGGCACTGTTACTGGTCATGTTaGGAGGAGGACCAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGRQLRMRGPCRTAAQRHCYWSC*EEDQED Trigger: GTCCTCCTGGTCCTCCTCCCAACATGACCAGTAACA...GTGCCGTTGCGCTGCTGTGCGGCATGGGCCTCGCATCCGCAGCTGCCTGCCACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR TCA 90 bp | CCCCGGCCTAGCACGGCCCTGCCTCCTCCAGTTTGTGGACCAGAGCACAGAAGGCCACATTCACACGCATaGTGTCCACCACCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRPSTALPPPVCGPEHRRPHSHA*CPPPPP Trigger: TGGAGGAGGTGGTGGACATCATGCGTGTGAATGTGG...CCTTCTGTGCTCTGGTCCACAAACTGGAGGAGGCAGGGCCGTGCTAGGCCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR GCA 90 bp | CCCCGGCCTAGCACGGCCCTGCCTCCTCCAGTTTGTGGACCAGAGCACAGAAGGTTAGCTTGGCAGCACTaGTCTCAAATTGTGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRPSTALPPPVCGPEHRRLAWQH*SQIVML Trigger: GAGCATCACAATTTGAGAGCAGTGCTGCCAAGCTAA...CCTTCTGTGCTCTGGTCCACAAACTGGAGGAGGCAGGGCCGTGCTAGGCCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CAA 72 bp | GGCTGGGTGGGCCAACAGGGAACATACGCTCCAGGCTaGGGACACACCAAGGACAGTGTTGCTTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWVGQQGTYAPG*GHTKDSVASSP Trigger: TGGAGAAGAAGCAACACTGTCCTTGGTGTGTCCCAAGCCTGGAGCGTATGTTCCCTGTTGGCCCACCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR GCA 90 bp | GATGGAAGCCCCACATCATCCCATGGCAAACAAAGAGGAGATGTGGGAAGCTTGTGTGATGCTCCGGCCTaGAAGGCGTCAGCCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGSPTSSHGKQRGDVGSLCDAPA*KASARS Trigger: TGACCGGGCTGACGCCTTGCAGGCCGGAGCATCACA...CAAGCTTCCCACATCTCCTCTTTGTTTGCCATGGGATGATGTGGGGCTTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR TCA 90 bp | AATGCAGAATGGATGGGCACAGCGGCTGCAGGGAGAACTAACGGAAGAGTGGCACCACATTCACACGCATaGTGTCCACCACCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NAEWMGTAAAGRTNGRVAPHSHA*CPPPPP Trigger: TGGAGGAGGTGGTGGACATCATGCGTGTGAATGTGG...TGCCACTCTTCCGTTAGTTCTCCCTGCAGCCGCTGTGCCCATCCATTCTGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGTGGAGACCTTCGGGGGACATTGGGAGGCTACACTGACTGCTTTCTTCCCACATTCACACGCATaGTGTCCACCACCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRVETFGGHWEATLTAFFPHSHA*CPPPPP Trigger: TGGAGGAGGTGGTGGACATCATGCGTGTGAATGTGG...GAAGAAAGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGTCTCCACTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 ENSMUST00000205223.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAGTGGAGACCTTCGGGGGACATTGGGAGGCTACACTGACTGCTTTCTTACTTGTGCCTGGGTCTaGTGTAACCGCCTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: EQSGDLRGTLGGYTDCFLTCAWV*CNRLLL Trigger: CAGTAACAGGCGGTTACAGCAGACCCAGGCACAAGT...AAGAAAGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGTCTCCACTCTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 ENSMUST00000205223.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGTGGAGACCTTCGGGGGACATTGGGAGGCTACACTGACTGCTTTCTTCACTTGTGCCTGGGTCTaGTGTAACCGCCTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SRVETFGGHWEATLTAFFTCAWV*CNRLLL Trigger: CAGTAACAGGCGGTTACAGCAGACCCAGGCACAAGT...GAAGAAAGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGTCTCCACTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 ENSMUST00000205223.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAGTGGAGACCTTCGGGGGACATTGGGAGGCTACACTGACTGCTTTCTTTGTTACTGGTCATGTTaGGAGGAGGACCAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EQSGDLRGTLGGYTDCFLCYWSC*EEDQED Trigger: GTCCTCCTGGTCCTCCTCCCAACATGACCAGTAACA...AAGAAAGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGTCTCCACTCTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 ENSMUST00000205223.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCAAGCTACTACTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAACTTGTGCCTGGGTCTaGTGTAACCGCCTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: WQQATTSQLFLLPSCQRPTCAWV*CNRLLL Trigger: CAGTAACAGGCGGTTACAGCAGACCCAGGCACAAGT...TGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGTAGTAGCTTGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| 3UTR CAA 72 bp | TATTCTTGCTCCCCTCCTGCCAAAGGCCAGCCTTTCTaGGAGACACCATGGACACAAATACCCTTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSCSPPAKGQPF*ETPWTQIPFSS Trigger: GGAGGAGAAGGGTATTTGTGTCCATGGTGTCTCCAAGAAAGGCTGGCCTTTGGCAGGAGGGGAGCAAGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR TCA 90 bp | GCACTGTCCAGAGCTTCGCTTACCCAGAGTCTGAGAAAGAAAACCGTTAGAGCTCCACATTCACACGCATaGTGTCCACCACCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSRASLTQSLRKKTVRAPHSHA*CPPPPP Trigger: TGGAGGAGGTGGTGGACATCATGCGTGTGAATGTGG...AGCTCTAACGGTTTTCTTTCTCAGACTCTGGGTAAGCGAAGCTCTGGACAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| CDS-3UTR CCA 90 bp | TGGACCCTCCTATCCAAAACTGAGCTGCGGGATCAGTGGACTTCTCTAACTCTGTGTTACTGGTCATGTTaGGAGGAGGACCAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WTLLSKTELRDQWTSLTLCYWSC*EEDQED Trigger: GTCCTCCTGGTCCTCCTCCCAACATGACCAGTAACA...CAGAGTTAGAGAAGTCCACTGATCCCGCAGCTCAGTTTTGGATAGGAGGGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCGTCTTGCAAATCAGCAATGAGTCCTCATATGACTGCTTGTTTGTTCTTCGAGACAGGGTCCTCCTaGCTGGCACAGGCTTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSCKSAMSPHMTACLFFETGSS*LAQASA Trigger: GGCCGAAGCCTGTGCCAGCCAGGAGGACCCTGTCTC...GAAGAACAAACAAGCAGTCATATGAGGACTCATTGCTGATTTGCAAGACGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| CDS-3UTR TCA 90 bp | ATCAACAACAAGGGAGGGACAGGCCTTTCATTAGTGAGATGGCAAGAAGCACACACTGCTCTCAAATTGTaGTGCTCCGGCCTGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: INNKGGTGLSLVRWQEAHTALKL*CSGLQG Trigger: GCCTTGCAGGCCGGAGCATCACAATTTGAGAGCAGT...GTGTGCTTCTTGCCATCTCACTAATGAAAGGCCTGTCCCTCCCTTGTTGTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGTGGAGACCTTCGGGGGACATTGGGAGGCTACACTGACTGCTTTCTTCTTAGCTTGGCAGCACTaGTCTCAAATTGTGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRVETFGGHWEATLTAFFLAWQH*SQIVML Trigger: GAGCATCACAATTTGAGAGCAGTGCTGCCAAGCTAA...GAAGAAAGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGTCTCCACTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 ENSMUST00000205223.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCTGGTGTTTTTACAACCAGAAAGTACGCCTTTCCTAGGCCTACAGAGATCCTCCACTTGTGCCTaGGTCTGCTGTAACCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLVFLQPESTPFLGLQRSSTCA*VCCNRL Trigger: CAGGCGGTTACAGCAGACCCAGGCACAAGTGGAGGA...TCTCTGTAGGCCTAGGAAAGGCGTACTTTCTGGTTGTAAAAACACCAGGACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR CCA 90 bp | ATTGCCCTCATCTTCCTTCCGTCTTGCAAATCAGCAATGAGTCCTCATATGACTCAGGGTCCTCCTGGCTaGCACAGGCTTCGGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IALIFLPSCKSAMSPHMTQGPPG*HRLRPF Trigger: AAAAGGCCGAAGCCTGTGCCAGCCAGGAGGACCCTG...AGTCATATGAGGACTCATTGCTGATTTGCAAGACGGAAGGAAGATGAGGGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
||
| 3UTR CAA 72 bp | TCATCCCATGGCAAACAAAGAGGAGATGTGGGAAGCTaGGCTTCAACTGACTGCAAAGTCCCAGGGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSHGKQRGDVGS*ASTDCKVPGLA Trigger: AGCTAACCCTGGGACTTTGCAGTCAGTTGAAGCCAAGCTTCCCACATCTCCTCTTTGTTTGCCATGGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
||
| CDS-3UTR GCA 90 bp | CTCATTGCCCTCATCTTCCTTCCGTCTTGCAAATCAGCAATGAGTCCTCATATGACTTGTGCCTGGGTCTaGTGTAACCGCCTGTTACTG | + |
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Preference number: 4 (lower is better) Translates to: LIALIFLPSCKSAMSPHMTCAWV*CNRLLL Trigger: CAGTAACAGGCGGTTACAGCAGACCCAGGCACAAGT...CATATGAGGACTCATTGCTGATTTGCAAGACGGAAGGAAGATGAGGGCAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS-3UTR TCA 90 bp | CTCATTGCCCTCATCTTCCTTCCGTCTTGCAAATCAGCAATGAGTCCTCATATGTTCTTTCTCCCAGCATaGGATTCCTGGGGAAATTCC | + |
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Preference number: 4 (lower is better) Translates to: LIALIFLPSCKSAMSPHMFFLPA*DSWGNS Trigger: GGAATTTCCCCAGGAATCTCATGCTGGGAGAAAGAA...CATATGAGGACTCATTGCTGATTTGCAAGACGGAAGGAAGATGAGGGCAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS-3UTR CCA 90 bp | TATGTGTGTGTGTGTGTATCACTAACATCAGAAAGGAATGTCAAGTACCATGGCTGTTACTGGTCATGTTaGGAGGAGGACCAGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: YVCVCVSLTSERNVKYHGCYWSC*EEDQED Trigger: GTCCTCCTGGTCCTCCTCCCAACATGACCAGTAACA...GCCATGGTACTTGACATTCCTTTCTGATGTTAGTGATACACACACACACACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTATCACTAACATCAGAAAGGAATGTCAAGTACCATGGCTGTTAGCTTGGCAGCACTaGTCTCAAATTGTGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCITNIRKECQVPWLLAWQH*SQIVML Trigger: GAGCATCACAATTTGAGAGCAGTGCTGCCAAGCTAA...CAGCCATGGTACTTGACATTCCTTTCTGATGTTAGTGATACACACACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS-3UTR GCA 90 bp | ACTCATTGCCCTCATCTTCCTTCCGTCTTGCAAATCAGCAATGAGTCCTCATATTTGGGGGACCATTTTTaGAGTCATTTCTGTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: THCPHLPSVLQISNESSYLGDHF*SHFCSQ Trigger: TTGGCTACAGAAATGACTGCAAAAATGGTCCCCCAA...ATATGAGGACTCATTGCTGATTTGCAAGACGGAAGGAAGATGAGGGCAATGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS-3UTR CAA 90 bp | TGGCAGGCAGCTGCGGATGCGAGGCCCATGCCGCACAGCAGCGCAACGGCACACCTGTTACTGGTCATGTaGGGAGGAGGACCAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: WQAAADARPMPHSSATAHLLLVM*GGGPGG Trigger: TCCTCCTGGTCCTCCTCCCAACATGACCAGTAACAG...GTGTGCCGTTGCGCTGCTGTGCGGCATGGGCCTCGCATCCGCAGCTGCCTGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| CDS-3UTR CAA 90 bp | CCCAGAGGGCCTCAAAACAGCACCTGCTGTAGCCTTGCTCCTGCTGTCACCACACTGTTACTGGTCATGTaGGGAGGAGGACCAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: PRGPQNSTCCSLAPAVTTLLLVM*GGGPGG Trigger: TCCTCCTGGTCCTCCTCCCAACATGACCAGTAACAG...TGTGGTGACAGCAGGAGCAAGGCTACAGCAGGTGCTGTTTTGAGGCCCTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS GCA 90 bp | CTTTTTAGCTTGGCAGCACTGCTCTCAAATTGTGATGCTCCGGCCTaGAAGGCGTCAGCCCGGTCATCCAGCTCTGACAACTTCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LFSLAALLSNCDAPA*KASARSSSSDNFWS Trigger: GGACCAGAAGTTGTCAGAGCTGGATGACCGGGCTGACGCCTTGCAGGCCGGAGCATCACAATTTGAGAGCAGTGCTGCCAAGCTAAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032487.14 ENSMUST00000063588.11 ENSMUST00000100942.9 ENSMUST00000205223.2 |
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| CDS-3UTR CAA 90 bp | GGCCAGCCTTTCTTGGAGACACCATGGACACAAATACCCTTCTCCTCCCCTCAGCTGTTACTGGTCATGTaGGGAGGAGGACCAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: GQPFLETPWTQIPFSSPQLLLVM*GGGPGG Trigger: TCCTCCTGGTCCTCCTCCCAACATGACCAGTAACAG...CTGAGGGGAGGAGAAGGGTATTTGTGTCCATGGTGTCTCCAAGAAAGGCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| CDS-3UTR CAA 90 bp | GAGCAGAGTGGAGACCTTCGGGGGACATTGGGAGGCTACACTGACTGCTTTCTTCTGTTACTGGTCATGTaGGGAGGAGGACCAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: EQSGDLRGTLGGYTDCFLLLLVM*GGGPGG Trigger: TCCTCCTGGTCCTCCTCCCAACATGACCAGTAACAG...AAGAAAGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGTCTCCACTCTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 ENSMUST00000205223.2 |
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| CDS CCA 90 bp | TGGTCTACAGATGTAAACAACACCGAGAGACAGGGTCCTCCTGGCTaGCACAGGCTTCGGCCTTTTCTTTCTCCCAGCATGAGATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: WSTDVNNTERQGPPG*HRLRPFLSPSMRFL Trigger: CAGGAATCTCATGCTGGGAGAAAGAAAAGGCCGAAGCCTGTGCCAGCCAGGAGGACCCTGTCTCTCGGTGTTGTTTACATCTGTAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS CCA 90 bp | AGCATGGTCTACAGATGTAAACAACACCGAGAGACAGGGTCCTCCTaGCTGGCACAGGCTTCGGCCTTTTCTTTCTCCCAGCATGAGATT | + |
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Preference number: 5 (lower is better) Translates to: SMVYRCKQHRETGSS*LAQASAFSFSQHEI Trigger: AATCTCATGCTGGGAGAAAGAAAAGGCCGAAGCCTGTGCCAGCCAGGAGGACCCTGTCTCTCGGTGTTGTTTACATCTGTAGACCATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS-3UTR CAA 90 bp | CAGCTCTCATTTCTCGTGATCAACAACAAGGGAGGGACAGGCCTTTCATTAGTGTCCCTCTCCAAGACCTaGTCCACATTCACACGCATG | + |
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Preference number: 5 (lower is better) Translates to: QLSFLVINNKGGTGLSLVSLSKT*STFTRM Trigger: CATGCGTGTGAATGTGGACAAGGTCTTGGAGAGGGA...CACTAATGAAAGGCCTGTCCCTCCCTTGTTGTTGATCACGAGAAATGAGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| CDS-3UTR CAA 90 bp | AGCAGAGTGGAGACCTTCGGGGGACATTGGGAGGCTACACTGACTGCTTTCTTCTACTTCCTTTTTAGCTaGGCAGCACTGCTCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SRVETFGGHWEATLTAFFYFLFS*AALLSN Trigger: ATTTGAGAGCAGTGCTGCCAAGCTAAAAAGGAAGTA...GAAGAAAGCAGTCAGTGTAGCCTCCCAATGTCCCCCGAAGGTCTCCACTCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 ENSMUST00000205223.2 |
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| CDS-3UTR CAA 90 bp | ACTTCCCAACTATTCTTGCTCCCCTCCTGCCAAAGGCCAGCCTTTCTTGGAGACTACTTCCTTTTTAGCTaGGCAGCACTGCTCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: TSQLFLLPSCQRPAFLGDYFLFS*AALLSN Trigger: ATTTGAGAGCAGTGCTGCCAAGCTAAAAAGGAAGTA...GTCTCCAAGAAAGGCTGGCCTTTGGCAGGAGGGGAGCAAGAATAGTTGGGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| CDS-3UTR CAA 90 bp | AGTGACTTCAGGACTGGACCACGAGCAGCATTTCTAGTTTTGAGGAAGGGTGCATACTTCCTTTTTAGCTaGGCAGCACTGCTCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SDFRTGPRAAFLVLRKGAYFLFS*AALLSN Trigger: ATTTGAGAGCAGTGCTGCCAAGCTAAAAAGGAAGTA...TGCACCCTTCCTCAAAACTAGAAATGCTGCTCGTGGTCCAGTCCTGAAGTCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032487.14 ENSMUST00000100942.9 |
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| CDS-3UTR CAA 90 bp | TTAATATGCCCAGCAGAGCTGTGCACCTCTTTAATCCCAAGCATTCAGGTGGCATACTTCCTTTTTAGCTaGGCAGCACTGCTCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: LICPAELCTSLIPSIQVAYFLFS*AALLSN Trigger: ATTTGAGAGCAGTGCTGCCAAGCTAAAAAGGAAGTA...TGCCACCTGAATGCTTGGGATTAAAGAGGTGCACAGCTCTGCTGGGCATATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS-3UTR CAA 90 bp | CTCATTGCCCTCATCTTCCTTCCGTCTTGCAAATCAGCAATGAGTCCTCATATGGGAAATTCCAGTTTCTaGGGGGACCATTTTTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LIALIFLPSCKSAMSPHMGNSSF*GDHFCS Trigger: ACTGCAAAAATGGTCCCCCAAGAAACTGGAATTTCC...CATATGAGGACTCATTGCTGATTTGCAAGACGGAAGGAAGATGAGGGCAATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS CCA 72 bp | GATGTAAACAACACCGAGAGACAGGGTCCTCCTGGCTaGCACAGGCTTCGGCCTTTTCTTTCTCCCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: DVNNTERQGPPG*HRLRPFLSPSM Trigger: CATGCTGGGAGAAAGAAAAGGCCGAAGCCTGTGCCAGCCAGGAGGACCCTGTCTCTCGGTGTTGTTTACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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| CDS CCA 72 bp | TACAGATGTAAACAACACCGAGAGACAGGGTCCTCCTaGCTGGCACAGGCTTCGGCCTTTTCTTTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: YRCKQHRETGSS*LAQASAFSFSQ Trigger: CTGGGAGAAAGAAAAGGCCGAAGCCTGTGCCAGCCAGGAGGACCCTGTCTCTCGGTGTTGTTTACATCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063588.11 |
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