RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VAC14 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000010936

Ensembl transcript IDs: ENSMUST00000034190.11, ENSMUST00000212829.2, ENSMUST00000213003.2

Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGAGGTTCTGGCTTTCCCGTCTCCTCCTGGGAGCGGCTGAGGGGTaGGCTGGCTGCCTAGTGCTGGGTCAGAGGGAGTACCGGGGTCTG +
Preference number: 1 (lower is better)
Translates to: KRFWLSRLLLGAAEG*AGCLVLGQREYRGL
Trigger: CAGACCCCGGTACTCCCTCTGACCCAGCACTAGGCAGCCAGCTCACCCCTCAGCCGCTCCCAGGAGGAGACGGGAAAGCCAGAACCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 90 bp TCATCGTGGCTACGGCCTGCCCAAGGCCGGGTAGGGAGACCGGATTaGAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGGTAGTAGCTCT +
Preference number: 1 (lower is better)
Translates to: SSWLRPAQGRVGRPD*REALLPLLGLGSSS
Trigger: AGAGCTACTACCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGCCACGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 90 bp GTAGGTTGGCTCTGCCGGAGGTGGGCACCTGAAGCTCCGAGTGGTTaGCTCGGAGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCT +
Preference number: 1 (lower is better)
Translates to: VGWLCRRWAPEAPSG*LGGQGHQVHLGHPS
Trigger: AGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAGCCAACCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 90 bp TCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGCCTaGCCAAGGCCGGGTAGGGAGACCGGATTGCAGAGAGGCTCTCCT +
Preference number: 1 (lower is better)
Translates to: SEPASGQLHLIVATA*PRPGRETGLQRGSP
Trigger: AGGAGAGCCTCTCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp GAGGAGCTGAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTaGCTGGTGGTTGGGTCCAGCCCTGCTGGAGGCAGGTTCTTAGGC +
Preference number: 1 (lower is better)
Translates to: EELRLTEPIPSPSLP*LVVGSSPAGGRFLG
Trigger: GCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTCAGCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR TCA 90 bp GACCTGCATCTTGGAGCCTGGTCTTGCCTCCCAGTAGGACAAGGATaGTGCTGGGAGCCTGAGCAGCCAGGCCTTGGTGCCAGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: DLHLGAWSCLPVGQG*CWEPEQPGLGARWQ
Trigger: CTGCCACCTGGCACCAAGGCCTGGCTGCTCAGGCTCCCAGCATCATCCTTGTCCTACTGGGAGGCAAGACCAGGCTCCAAGATGCAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp TGCACATTTAGCCTGGGTGTTACTCACCAGGCAGTACTCGCCCAGTaGCTCCTGGCACATGGCGGCTCCTGGGCAAGCCCCAGAGGGTCA +
Preference number: 1 (lower is better)
Translates to: CTFSLGVTHQAVLAQ*LLAHGGSWASPRGS
Trigger: TGACCCTCTGGGGCTTGCCCAGGAGCCGCCATGTGCCAGGAGCCACTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp GTTATCTGGAGTGCTGCCTGCTTTGAGGAGCAGGCGCTGCATGTGTaGAGGCGCCAAGTGCTGTGCTTGCCCAGGCAGCCGCTGCTTCTG +
Preference number: 1 (lower is better)
Translates to: VIWSAACFEEQALHV*RRQVLCLPRQPLLL
Trigger: CAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp TGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGGTTaGGCACACACTGGAGCCGGTGAGAGAGCAGCTGGAAGGCACTGC +
Preference number: 1 (lower is better)
Translates to: WGPLSDSLQSAAAQG*AHTGAGERAAGRHC
Trigger: GCAGTGCCTTCCAGCTGCTCTCTCACCGGCTCCAGTGTGTGCCCAACCCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR TCA 90 bp TCCCGACTCAGGAGAGAATCCATCGGTCCCAGGACAGAGTGTAGCTaGCAGTGCTGGGGTCCAGGTGCTCTGCTGGGAGGAGCTGAGGCT +
Preference number: 1 (lower is better)
Translates to: SRLRRESIGPRTECS*QCWGPGALLGGAEA
Trigger: AGCCTCAGCTCCTCCCAGCAGAGCACCTGGACCCCAGCACTGTCAGCTACACTCTGTCCTGGGACCGATGGATTCTCTCCTGAGTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR TCA 90 bp GTACTGGGAGGGTTTAGTAGGTTGGCTCTGCCGGAGGTGGGCACCTaGAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTGCA +
Preference number: 1 (lower is better)
Translates to: VLGGFSRLALPEVGT*SSEWLTRRSGPSGA
Trigger: TGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAGCCAACCTACTAAACCCTCCCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 90 bp TGTGGAGGCGCCAAGTGCTGTGCTTGCCCAGGCAGCCGCTGCTTCTaGACATTTAGCCTGGGTGTTACTCACCAGGCAGTACTCGCCCAG +
Preference number: 1 (lower is better)
Translates to: CGGAKCCACPGSRCF*TFSLGVTHQAVLAQ
Trigger: CTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 90 bp CACCTGAAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTaGACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTC +
Preference number: 1 (lower is better)
Translates to: HLKLRVVDSEVRAIR*TWVIRLACRGGSNF
Trigger: GAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CCA 90 bp GTGGCGGTAGTTCTGGGTGAGGAAGCAGAGGGACACGGTGGTGACTaGGTTGTGGCACCAGGAGCGGTACAGGCAGCAGAAGAGGTTCTG +
Preference number: 1 (lower is better)
Translates to: VAVVLGEEAEGHGGD*VVAPGAVQAAEEVL
Trigger: CAGAACCTCTTCTGCTGCCTGTACCGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCCCTCTGCTTCCTCACCCAGAACTACCGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CCA 90 bp AGTGCTGTGCTTGCCCAGGCAGCCGCTGCTTCTGCACATTTAGCCTaGGTGTTACTCACCAGGCAGTACTCGCCCAGTGGCTCCTGGCAC +
Preference number: 1 (lower is better)
Translates to: SAVLAQAAAASAHLA*VLLTRQYSPSGSWH
Trigger: GTGCCAGGAGCCACTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTaGCTACGGCCTGCCCAAGGCCGGGTAGGGAGACCGGATTGCAGA +
Preference number: 1 (lower is better)
Translates to: NPRSLNLLLASCTSS*LRPAQGRVGRPDCR
Trigger: TCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp AACACACTAGCCCAGATCCCTTCCTCAGCCGAGCTGCGAAAGCACTaGAAGCACCTGGACCAAGCACTGCTAGGCGGAGACACAGCTGCC +
Preference number: 1 (lower is better)
Translates to: NTLAQIPSSAELRKH*KHLDQALLGGDTAA
Trigger: GGCAGCTGTGTCTCCGCCTAGCAGTGCTTGGTCCAGGTGCTTCCAGTGCTTTCGCAGCTCGGCTGAGGAAGGGATCTGGGCTAGTGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp AAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTGCACCTaGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTCTGCCAA +
Preference number: 1 (lower is better)
Translates to: KLRVVDSEVRAIRCT*VIRLACRGGSNFCQ
Trigger: TTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 90 bp TGCATGTGTGGAGGCGCCAAGTGCTGTGCTTGCCCAGGCAGCCGCTaGTTCTGCACATTTAGCCTGGGTGTTACTCACCAGGCAGTACTC +
Preference number: 1 (lower is better)
Translates to: CMCGGAKCCACPGSR*FCTFSLGVTHQAVL
Trigger: GAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCCACACATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp GCAGCAGGCTGGGGAGGGCATCGAGGGACAGCCCATGGCAGGCTCTaGTTTAACATTCTGATGGGTTTCATGTCAGCACTGGCCTGTGTG +
Preference number: 1 (lower is better)
Translates to: AAGWGGHRGTAHGRL*FNILMGFMSALACV
Trigger: CACACAGGCCAGTGCTGACATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATGCCCTCCCCAGCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp GCTGCCAAGGAGCAAAGGCCCAGGTGGCCATCTAGGCTAGGAAGGTaGCTAGAGCCAGGGCTGCCTCTGGCTTCTCCACTACACTGTAAA +
Preference number: 1 (lower is better)
Translates to: AAKEQRPRWPSRLGR*LEPGLPLASPLHCK
Trigger: TTTACAGTGTAGTGGAGAAGCCAGAGGCAGCCCTGGCTCTAGCCACCTTCCTAGCCTAGATGGCCACCTGGGCCTTTGCTCCTTGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 90 bp GCAGCTCTGTGTAGTCGATGCTGGGGGAGTCACCTTTCTGGGACTTaGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: AALCSRCWGSHLSGT*GPLSDSLQSAAAQG
Trigger: ACCCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCCCCAGCATCGACTACACAGAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CCA 90 bp TTGACTCGGAGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTaGCCTGCAGGGGAGGAAGCAATTTCTGCCAACACTTCCAGATCC +
Preference number: 1 (lower is better)
Translates to: LTRRSGPSGAPGSSV*PAGEEAISANTSRS
Trigger: GGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 90 bp TCGGAGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTGGCCTaGAGGGGAGGAAGCAATTTCTGCCAACACTTCCAGATCCTTCAA +
Preference number: 1 (lower is better)
Translates to: SEVRAIRCTWVIRLA*RGGSNFCQHFQILQ
Trigger: TTGAAGGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CCA 90 bp CTCCACTGGCTGTCCCCTCCTGCTTTGGCAGGGAATCCTCAGGGTTaGGTTCGGTCTGCTTCTGTGCTACTGACTTTGGCTCATCGGGTT +
Preference number: 1 (lower is better)
Translates to: LHWLSPPALAGNPQG*VRSASVLLTLAHRV
Trigger: AACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR TCA 90 bp GGACGCGAACTTGAGGTCCTCCTCCCGAAGCAGGATGTCTGCCATTaGATGGAAGATGTTCTCTGCATTCAGCAGGAGGCAGAGCTGCCT +
Preference number: 1 (lower is better)
Translates to: GRELEVLLPKQDVCH*MEDVLCIQQEAELP
Trigger: AGGCAGCTCTGCCTCCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR TCA 90 bp TGGCAGGGAATCCTCAGGGTTGGGTTCGGTCTGCTTCTGTGCTACTaGCTTTGGCTCATCGGGTTCATCATCCTCAGGGGTGACCAGCTT +
Preference number: 1 (lower is better)
Translates to: WQGILRVGFGLLLCY*LWLIGFIILRGDQL
Trigger: AAGCTGGTCACCCCTGAGGATGATGAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 90 bp TCTCCACTACACTGTAAACACACGTGTGTTATCTGGAGTGCTGCCTaGTTTGAGGAGCAGGCGCTGCATGTGTGGAGGCGCCAAGTGCTG +
Preference number: 1 (lower is better)
Translates to: SPLHCKHTCVIWSAA*FEEQALHVWRRQVL
Trigger: CAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAACACACGTGTGTTTACAGTGTAGTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 90 bp GTCCCCTCCTGCTTTGGCAGGGAATCCTCAGGGTTGGGTTCGGTCTaGTTCTGTGCTACTGACTTTGGCTCATCGGGTTCATCATCCTCA +
Preference number: 1 (lower is better)
Translates to: VPSCFGRESSGLGSV*FCATDFGSSGSSSS
Trigger: TGAGGATGATGAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CCA 90 bp GCGAACTTGAGGTCCTCCTCCCGAAGCAGGATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTCAGCAGGAGGCAGAGCTGCCTGATG +
Preference number: 1 (lower is better)
Translates to: ANLRSSSRSRMSAIE*KMFSAFSRRQSCLM
Trigger: CATCAGGCAGCTCTGCCTCCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR GCA 90 bp TGCACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTCTaGCAACACTTCCAGATCCTTCAAGACAACCTCATCAGATTCGTC +
Preference number: 1 (lower is better)
Translates to: CTWVIRLACRGGSNF*QHFQILQDNLIRFV
Trigger: GACGAATCTGATGAGGTTGTCTTGAAGGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CCA 90 bp GCTAGAGAGAAAGAGTGGATTAGGGCTTTGCTAACGGAGGGTGGATaGGAAAATGCCTTTGTGTGTAGTGAGGCGCACACCAAAGCTCAG +
Preference number: 1 (lower is better)
Translates to: AREKEWIRALLTEGG*ENAFVCSEAHTKAQ
Trigger: CTGAGCTTTGGTGTGCGCCTCACTACACACAAAGGCATTTTCCCATCCACCCTCCGTTAGCAAAGCCCTAATCCACTCTTTCTCTCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 90 bp CTGGCCCTTTATCACCAATTGCCACCTTCTCTGATACTGCATTCTTaGCATTCTAGAAGACTTCTGGGTGCATCGCCCTCTTCCCCTCTC +
Preference number: 1 (lower is better)
Translates to: LALYHQLPPSLILHS*HSRRLLGASPSSPL
Trigger: GAGAGGGGAAGAGGGCGATGCACCCAGAAGTCTTCTAGAATGTCAAGAATGCAGTATCAGAGAAGGTGGCAATTGGTGATAAAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 90 bp GGCCCTGACAGGATCTTACATGTAAAGATGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCC +
Preference number: 1 (lower is better)
Translates to: GPDRILHVKMGHSIS*TSLSTSVRKSTVTS
Trigger: GGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATGTAAGATCCTGTCAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 90 bp AGCAGTTGCAGGCGTAGATATGTAAAGATGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCC +
Preference number: 1 (lower is better)
Translates to: SSCRRRYVKMGHSIS*TSLSTSVRKSTVTS
Trigger: GGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATATCTACGCCTGCAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 90 bp AAACTTTTTACCATGTACACAGCTGTGGAGAAGCCTGAACCTACTTaGAGTTCTTTCTTCCCGCTGGGCCTTGAGGAAGCTTGGTTTGCT +
Preference number: 1 (lower is better)
Translates to: KLFTMYTAVEKPEPT*SSFFPLGLEEAWFA
Trigger: AGCAAACCAAGCTTCCTCAAGGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACATGGTAAAAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 90 bp TCCAGATCCTTCAAGACAACCTCATCAGATTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTT +
Preference number: 1 (lower is better)
Translates to: SRSFKTTSSDSSDNV*SKMGKRLSVCRNIF
Trigger: AAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTTGTCTTGAAGGATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CCA 90 bp TCAAGACAACCTCATCAGATTCGTCAGATAATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTTCGAGGAGTTT +
Preference number: 1 (lower is better)
Translates to: SRQPHQIRQIMSEVR*GRGCLCAGTSFEEF
Trigger: AAACTCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTTGTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp GGCTCTGCCGGAGGTGGGCACCTGAAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTGCACCTaGGTCATCCGTCTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: GSAGGGHLKLRVVDSEVRAIRCT*VIRLAC
Trigger: GCAGGCCAGACGGATGACCCAGGTGCACCTGATGGC...CCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp GGGAGACCGGATTGCAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGGTAGTAGCGCTGTCTCCAGGGCCTaGGCCATGGCAGCACCAGTA +
Preference number: 2 (lower is better)
Translates to: GRPDCREALLPLLGLGSSAVSRA*AMAAPV
Trigger: TACTGGTGCTGCCATGGCTCAGGCCCTGGAGACAGC...GCTACTACCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR GCA 90 bp GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTCTGGCTGTCCCCTCCTaGTTTGGCAGGGAATCCTCA +
Preference number: 2 (lower is better)
Translates to: EPIPSPSLPWLVVGSSPALAVPS*FGRESS
Trigger: TGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAG...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp TGCTTTGAGGAGCAGGCGCTGCATGTGTGGAGGCGCCAAGTGCTGTGCTTGCCCGTGGTGACTGGGTTGTaGCACCAGGAGCGGTACAGG +
Preference number: 2 (lower is better)
Translates to: CFEEQALHVWRRQVLCLPVVTGL*HQERYR
Trigger: CCTGTACCGCTCCTGGTGCCACAACCCAGTCACCAC...GGGCAAGCACAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGGCACATGGCGGCTCCTaGGCAAGCCCCAGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: HTPCQCSGAKVKLFSQTGAHGGS*ASPRGS
Trigger: TGACCCTCTGGGGCTTGCCCAGGAGCCGCCATGTGC...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR TCA 90 bp TGCACGAGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCACCTCCTGGGAGCGGCTaGGGGGTGAGCTGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: CTSLSTSVRKSTVTSRSPPPGSG*GVSWLP
Trigger: AGGCAGCCAGCTCACCCCTCAGCCGCTCCCAGGAGG...TGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp GAGCTGCCTGATGATGAACGGGCCTCTGGCCTCCAGGAGCTTCCGTTCACTGCTGGTTGGGTCCAGCCCTaGTGGAGGCAGGTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: ELPDDERASGLQELPFTAGWVQP*WRQVLR
Trigger: CCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACC...AGCAGTGAACGGAAGCTCCTGGAGGCCAGAGGCCCGTTCATCATCAGGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp CAGGCCTTGGTGCCAGGTGGCAGAGAACTCGGTGGCTTCTTAGTGCCCCCTCTTGTCCAGGTGCTCTGCTaGGAGGAGCTGAGGCTGACA +
Preference number: 2 (lower is better)
Translates to: QALVPGGRELGGFLVPPLVQVLC*EELRLT
Trigger: TGTCAGCCTCAGCTCCTCCCAGCAGAGCACCTGGAC...AAGAGGGGGCACTAAGAAGCCACCGAGTTCTCTGCCACCTGGCACCAAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR GCA 90 bp GAGCTGCCTGATGATGAACGGGCCTCTGGCCTCCAGGAGCTTCCGTTCACTGCTCACACACCATGCCAGTaGTCTGGGGCCAAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: ELPDDERASGLQELPFTAHTPCQ*SGAKVK
Trigger: CTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG...AGCAGTGAACGGAAGCTCCTGGAGGCCAGAGGCCCGTTCATCATCAGGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp CCTGGGCCTGCTCTAGAACACACTAGCCCAGATCCCTTCCTCAGCCGAGCTGCGATGGTGTTGAGGGTGTaGACCATGGTGGACGCGAAC +
Preference number: 2 (lower is better)
Translates to: PGPALEHTSPDPFLSRAAMVLRV*TMVDAN
Trigger: GTTCGCGTCCACCATGGTGCACACCCTCAACACCAT...CGCAGCTCGGCTGAGGAAGGGATCTGGGCTAGTGTGTTCTAGAGCAGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGTGGGTCCAGCCCTGCTaGAGGCAGGTTCTTAGGCTC +
Preference number: 2 (lower is better)
Translates to: HTPCQCSGAKVKLFSQTGWVQPC*RQVLRL
Trigger: GAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCA...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp ACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCTCCCCCTCCCTACCCTaGCTGGTGGTTGGGTCCAGC +
Preference number: 2 (lower is better)
Translates to: TQLWRSLNLLAVLSSRWASPSLP*LVVGSS
Trigger: GCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGA...GGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CAA 90 bp CCTCCACTGGCTGTCCCCTCCTGCTTTGGCAGGGAATCCTCAGGGTaGGGTTCGGTCTGCTTCTGTGCTACTGACTTTGGCTCATCGGGT +
Preference number: 2 (lower is better)
Translates to: PPLAVPSCFGRESSG*GSVCFCATDFGSSG
Trigger: ACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp GATCCCCTCGCCCACTGCGCTGGTGTCTTACTTCCAGGTGCTGTTTCTGGACTTTGGTGGACGCGAACTTaGGGTCCTCCTCCCGAAGCA +
Preference number: 2 (lower is better)
Translates to: DPLAHCAGVLLPGAVSGLWWTRT*GPPPEA
Trigger: TGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCA...AAGTCCAGAAACAGCACCTGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp GGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGGCAGAAGTAGAGGGACACGGTGGTaGCTGGGTTGTGGCACCAGG +
Preference number: 2 (lower is better)
Translates to: GCSSRPAVAGVDLQQGRSRGTRW*LGCGTR
Trigger: CCTGGTGCCACAACCCAGTCACCACCGTGTCCCTCT...ACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR GCA 90 bp CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGTTGGGTCCAGCCCTaGTGGAGGCAGGTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: HTHHASALGPRSSSSHRQGWVQP*WRQVLR
Trigger: CCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACC...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGTTCTTAGGCTCCTTGTaGCCTCAGCTTAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: QSQYHPPPYPGWWLGPALFLGSL*PQLRDP
Trigger: AGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAA...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp AGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAATTCTTAGGCTCCTTGTaGCCTCAGCTTAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: RSGPSGAPGSSVWPAGEEFLGSL*PQLRDP
Trigger: AGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAA...TTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp CCTGAGGGGCTCTCAGGCAGTGACACACTAGGCAAGGTAGGCTTTGGACAGGCTCAGCAGAAGAGGTTCTaGCTTTCCGGGGTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: PEGLSGSDTLGKVGFGQAQQKRF*LSGVCR
Trigger: CCTGCAGACCCCGGAAAGCCAGAACCTCTTCTGCTG...AGCCTGTCCAAAGCCTACCTTGCCTAGTGTGTCACTGCCTGAGAGCCCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CAA 90 bp CCTGATGTATATAGCTGGGTGCTCAGAAGCCCAGGGCCGGTGAGATaGGATGCTGGCTCCAGGTGGGCTCTGAAGACTTGCACTGGAGGA +
Preference number: 2 (lower is better)
Translates to: PDVYSWVLRSPGPVR*DAGSRWALKTCTGG
Trigger: TCCTCCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCTCACCGGCCCTGGGCTTCTGAGCACCCAGCTATATACATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CAA 90 bp GGCAACAGCATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GNSMSRPYRALIRYG*FFTSSSCRRRSAAG
Trigger: CCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCATGCTGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR GCA 90 bp GGTGAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCGTCATCCGTCTGGCCTaGAGGGGAGGAAGCAATTTC +
Preference number: 2 (lower is better)
Translates to: GEQDGVEGVHHGGRELEVVIRLA*RGGSNF
Trigger: GAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGAC...GACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp GGGAGTCACCTTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAAACCTGGACCTCCACTaGCTGTCCCCTCCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: GSHLSGTWGPLSDSLQSANLDLH*LSPPAL
Trigger: CAAAGCAGGAGGGGACAGCCAGTGGAGGTCCAGGTT...TGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CAA 90 bp GTGAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGCAGGATGTCTGCCATTGAATGGAAG +
Preference number: 2 (lower is better)
Translates to: VSRMVLRVCTMVDAN*RSSSRSRMSAIEWK
Trigger: CTTCCATTCAATGGCAGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp AGGGCCTTGATCAGGTATGGGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGAGGGTCTGCAGGTCCTTaGGCTGGTTCCTCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: RALIRYGLFFTSSSCRRRGSAGP*AGSSAG
Trigger: TCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCC...TCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp TTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGTCAGGTCAGAGATGCTaGCAAGGAGCAAAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: FLGLGGRFQTVFSLQQLRSGQRC*QGAKAQ
Trigger: CTGGGCCTTTGCTCCTTGGCAGCATCTCTGACCTGA...CCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp CGCCAGCTGGATGAATTCCCGCATCCAGCACATAGCCGTCAGCTGAATCAGGTCACCATGCCAGTGCTCTaGGGCCAAGGTCAAGCTCTT +
Preference number: 2 (lower is better)
Translates to: RQLDEFPHPAHSRQLNQVTMPVL*GQGQAL
Trigger: AAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGT...GACCTGATTCAGCTGACGGCTATGTGCTGGATGCGGGAATTCATCCAGCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGAAGTAGGAGTTCATGGTaGGAGTGGAGGGGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: THHASALGPRSSSSHRQGSRSSW*EWRGSL
Trigger: AAGGCTCCCCCTCCACTCCCACCATGAACTCCTACT...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGCTGTCCCACTGCAGCTaGCCCTTTATCACCAATTGC +
Preference number: 2 (lower is better)
Translates to: HTPCQCSGAKVKLFSQTGLSHCS*PFITNC
Trigger: GCAATTGGTGATAAAGGGCCAGCTGCAGTGGGACAG...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp GAGCTGCCTGATGATGAACGGGCCTCTGGCCTCCAGGAGCTTCCGTTCACTGCTCACACGTGTGTTATCTaGAGTGCTGCCTGCTTTGAG +
Preference number: 2 (lower is better)
Translates to: ELPDDERASGLQELPFTAHTCVI*SAACFE
Trigger: CTCAAAGCAGGCAGCACTCCAGATAACACACGTGTG...AGCAGTGAACGGAAGCTCCTGGAGGCCAGAGGCCCGTTCATCATCAGGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGCCTGATGTATATAGCTaGGTGCTCAGAAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: HTPCQCSGAKVKLFSQTGPDVYS*VLRSPG
Trigger: CCCTGGGCTTCTGAGCACCCAGCTATATACATCAGG...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR TCA 90 bp GGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGGCAGAAGTGCTGCTTCTGGATTCTaGGGCTGTAGTCCCGACTCA +
Preference number: 2 (lower is better)
Translates to: GCSSRPAVAGVDLQQGRSAASGF*GCSPDS
Trigger: TGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGC...ACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR TCA 90 bp CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGCTGCTTCTGGATTCTaGGGCTGTAGTCCCGACTCA +
Preference number: 2 (lower is better)
Translates to: HHASALGPRSSSSHRQGLAASGF*GCSPDS
Trigger: TGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGC...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp GAGCCCCTGCATTTGTTTTTGGGTCCCAAGGTAAAGGCTCATCACTCAGGTCAGTGGTGGACGCGAACTTaGGGTCCTCCTCCCGAAGCA +
Preference number: 2 (lower is better)
Translates to: EPLHLFLGPKVKAHHSGQWWTRT*GPPPEA
Trigger: TGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCA...CTGACCTGAGTGATGAGCCTTTACCTTGGGACCCAAAAACAAATGCAGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR GCA 90 bp TGCACGAGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCACACACACCATGCCAGTaGTCTGGGGCCAAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: CTSLSTSVRKSTVTSRSPHTPCQ*SGAKVK
Trigger: CTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG...TGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp GGTGAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCT +
Preference number: 2 (lower is better)
Translates to: GEQDGVEGVHHGGRELEVGHSIS*TSLSTS
Trigger: AGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCC...GACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTTCCCCCTCCCTACCCTaGCTGGTGGTTGGGTCCAGC +
Preference number: 2 (lower is better)
Translates to: KLFSQTGIRKRLLLDSEASPSLP*LVVGSS
Trigger: GCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGA...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp AAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATGTCCAGGTGCTCTGCTaGGAGGAGCTGAGGCTGACA +
Preference number: 2 (lower is better)
Translates to: KRLLLDSEAVVPTQERIHVQVLC*EELRLT
Trigger: TGTCAGCCTCAGCTCCTCCCAGCAGAGCACCTGGAC...ATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp GGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGGCAGAAGTACCATGCCAGTGCTCTaGGGCCAAGGTCAAGCTCTT +
Preference number: 2 (lower is better)
Translates to: GCSSRPAVAGVDLQQGRSTMPVL*GQGQAL
Trigger: AAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGT...ACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGAGCCAGGGCTGCCTCTaGCTTCTCCACTACACTGTA +
Preference number: 2 (lower is better)
Translates to: NPRSLNLLLASCTSSWLRSQGCL*LLHYTV
Trigger: TACAGTGTAGTGGAGAAGCCAGAGGCAGCCCTGGCT...CCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp CCCGAAGCAGGATGTCTGCCATTGAATGGAAGATGTTCTCTGCATTCAGCAGGAACCCGGCCCGCCAGCTaGATGAATTCCCGCATCCAG +
Preference number: 2 (lower is better)
Translates to: PEAGCLPLNGRCSLHSAGTRPAS*MNSRIQ
Trigger: CTGGATGCGGGAATTCATCCAGCTGGCGGGCCGGGT...TCCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CAA 90 bp TGCAGGGTCACTGGAGCCCTATCAGTGTTGGCTGAGGTGAAGACATaGATGCCACTTCCAAAGCTGGAGTCACAGGAACCTGGACCTCCA +
Preference number: 2 (lower is better)
Translates to: CRVTGALSVLAEVKT*MPLPKLESQEPGPP
Trigger: TGGAGGTCCAGGTTCCTGTGACTCCAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp GCCTCCAGGAGCTTCCGTTCACTGCTGAACGTCTGTAGAAGGTTGATCATGAACAGGACAGAGTGTAGCTaGCAGTGCTGGGGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: ASRSFRSLLNVCRRLIMNRTECS*QCWGPG
Trigger: ACCTGGACCCCAGCACTGTCAGCTACACTCTGTCCT...GTTCATGATCAACCTTCTACAGACGTTCAGCAGTGAACGGAAGCTCCTGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp TCTGAAGTAAGATGGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTTCGAGGAGAGGACAGAGTGTAGCTaGCAGTGCTGGGGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: SEVRWGRGCLCAGTSFEERTECS*QCWGPG
Trigger: ACCTGGACCCCAGCACTGTCAGCTACACTCTGTCCT...CTCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp AGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCAAACTTCGAAGCTCCGAGTGGTTaGCTCGGAGGTCAGGGCCAT +
Preference number: 2 (lower is better)
Translates to: SLSTSVRKSTVTSRSPNFEAPSG*LGGQGH
Trigger: ATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTC...GAAGTTTGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp GGTAGAGCCACTTCAGAACAGCAATCCTGGTCATCATCCCAATGGTTGTGTCACGGTTGGGTCCAGCCCTaGTGGAGGCAGGTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: GRATSEQQSWSSSQWLCHGWVQP*WRQVLR
Trigger: CCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACC...GTGACACAACCATTGGGATGATGACCAGGATTGCTGTTCTGAAGTGGCTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTC +
Preference number: 2 (lower is better)
Translates to: EPIPSPSLPWLVVGSSPAMSAIE*KMFSAF
Trigger: GAATGCAGAGAACATCTTCCATTCAATGGCAGACAT...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp CAGCATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTTGTTCTTCACGTCCCTATCAGTGTTGGCTaGGGTGAAGACATTGATGCC +
Preference number: 2 (lower is better)
Translates to: QHEQAVQGLDQVWVVLHVPISVG*GEDIDA
Trigger: GGCATCAATGTCTTCACCTCAGCCAACACTGATAGG...GACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp TTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGTTGTGCTGGCCTGTGTaGATTTCCACACAGATGTAC +
Preference number: 2 (lower is better)
Translates to: FLGLGGRFQTVFSLQQLRLCWPV*ISTQMY
Trigger: GTACATCTGTGTGGAAATGCACACAGGCCAGCACAA...CCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGTGGGTCCAGCCCTGCTaGAGGCAGGTTCTTAGGCTC +
Preference number: 2 (lower is better)
Translates to: SSSSHRQGLERGCFWILRWVQPC*RQVLRL
Trigger: GAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCA...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTTCCCCCTCCCTACCCTaGCTGGTGGTTGGGTCCAGC +
Preference number: 2 (lower is better)
Translates to: VISLLGQGWTSFCRGLCASPSLP*LVVGSS
Trigger: GCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGA...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp AGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCAAACTTCAGCTGGTTCCTCAGCTaGAAGAGCTCGGTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: SLSTSVRKSTVTSRSPNFSWFLS*KSSVEV
Trigger: CACCTCCACCGAGCTCTTCCAGCTGAGGAACCAGCT...GAAGTTTGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp ACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCGCCCATGGCAGGCTCTaGTTTAACATTCTGATGGGT +
Preference number: 2 (lower is better)
Translates to: TQLWRSLNLLAVLSSRWAAHGRL*FNILMG
Trigger: ACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGC...GGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCTCAGAACAGCAATCCTaGTCATCATCCCAATGGTTG +
Preference number: 2 (lower is better)
Translates to: EQDGVEGVHHGGRELEVLSEQQS*SSSQWL
Trigger: CAACCATTGGGATGATGACCAGGATTGCTGTTCTGA...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CAA 90 bp GGTCATCATCCCAATGGTTGTGTCACTAAGGTGACAGTTCAGGACTaGAACAATCCCGTCCAGGTGCAGGGTCACTGGAGCCCTATCAGT +
Preference number: 2 (lower is better)
Translates to: GHHPNGCVTKVTVQD*NNPVQVQGHWSPIS
Trigger: ACTGATAGGGCTCCAGTGACCCTGCACCTGGACGGGATTGTTCAAGTCCTGAACTGTCACCTTAGTGACACAACCATTGGGATGATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CAA 90 bp GGCAACAGCATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATATGTAAAGATG +
Preference number: 2 (lower is better)
Translates to: GNSMSRPYRALIRYG*FFTSSSCRRRYVKM
Trigger: CATCTTTACATATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCATGCTGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp GAGGGGCTCTCAGGCAGTGACACACTAGGCAAGGTAGGCTTTGGACAGGCTGAGAAATTCTTGAGCCCCTaGATTTGTTTTTGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: EGLSGSDTLGKVGFGQAEKFLSP*ICFWVP
Trigger: TGGGACCCAAAAACAAATGCAGGGGCTCAAGAATTT...CTCAGCCTGTCCAAAGCCTACCTTGCCTAGTGTGTCACTGCCTGAGAGCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp AGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCAAACTTCAGTAGGAGTTCATGGTaGGAGTGGAGGGGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: SLSTSVRKSTVTSRSPNFSRSSW*EWRGSL
Trigger: AAGGCTCCCCCTCCACTCCCACCATGAACTCCTACT...GAAGTTTGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp GGTCATCATCCCAATGGTTGTGTCACTAAGGTGACAGTTCAGGACTTGAACAATGGACACGGTGGTGACTaGGTTGTGGCACCAGGAGCG +
Preference number: 2 (lower is better)
Translates to: GHHPNGCVTKVTVQDLNNGHGGD*VVAPGA
Trigger: CGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCC...ATTGTTCAAGTCCTGAACTGTCACCTTAGTGACACAACCATTGGGATGATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp AGGGTTGGGCACACACTGGAGCCGGTGAGAGAGCAGCTGGAAGGCACTGCTCTGCCACATCTTAAACCTTaGCAGACATTATTTGTAGAC +
Preference number: 2 (lower is better)
Translates to: RVGHTLEPVREQLEGTALPHLKP*QTLFVD
Trigger: GTCTACAAATAATGTCTGCCAAGGTTTAAGATGTGG...CAGAGCAGTGCCTTCCAGCTGCTCTCTCACCGGCTCCAGTGTGTGCCCAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp AGGTGCAGGGTCACTGGAGCCCTATCAGTGTTGGCTGAGGTGAAGACATTGATGGAATCAGGTCATCTGTaGTCTGGCAGTGGATCACCA +
Preference number: 2 (lower is better)
Translates to: RCRVTGALSVLAEVKTLMESGHL*SGSGSP
Trigger: TGGTGATCCACTGCCAGACCACAGATGACCTGATTC...CATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CAA 90 bp CTACTTGCAGTTCTTTCTTCCCGCTGGGCCTTGAGGAAGCTTGGTTaGCTTAGCATCTTTGCTGTCGTCGGTGCCTCCTCCATCTTATTC +
Preference number: 2 (lower is better)
Translates to: LLAVLSSRWALRKLG*LSIFAVVGASSILF
Trigger: GAATAAGATGGAGGAGGCACCGACGACAGCAAAGATGCTAAGCAAACCAAGCTTCCTCAAGGCCCAGCGGGAAGAAAGAACTGCAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR TCA 90 bp GTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCCTCCCGAAGCAGGATGTCTAATTGCCACCTTCTCTaGTACTGCATTCTTGACATT +
Preference number: 2 (lower is better)
Translates to: VCTMVDANLRSSSRSRMSNCHLL*YCILDI
Trigger: AATGTCAAGAATGCAGTATCAGAGAAGGTGGCAATT...AGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCTTCTTAGGCTCCTTGTaGCCTCAGCTTAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: RKRLLLDSEAVVPTQERIFLGSL*PQLRDP
Trigger: AGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAA...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGGACACGGTGGTGACTaGGTTGTGGCACCAGGAGCG +
Preference number: 2 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCGHGGD*VVAPGA
Trigger: CGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCC...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CAA 90 bp AGGCGTAGATATGTAAAGATGGGGCACTCAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: RRRYVKMGHSISCTS*STSVRKSTVTSRSP
Trigger: TGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATATCTACGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR TCA 90 bp GCCTCCAGGAGCTTCCGTTCACTGCTGAACGTCTGTAGAAGGTTGATCATGAACCAGGATGTCTGCCATTaGATGGAAGATGTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: ASRSFRSLLNVCRRLIMNQDVCH*MEDVLC
Trigger: GCAGAGAACATCTTCCATTCAATGGCAGACATCCTG...GTTCATGATCAACCTTCTACAGACGTTCAGCAGTGAACGGAAGCTCCTGGAGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp AATCCTGGTCATCATCCCAATGGTTGTGTCACTAAGGTGACAGTTCAGGACTTGATGGTGTTGAGGGTGTaGACCATGGTGGACGCGAAC +
Preference number: 2 (lower is better)
Translates to: NPGHHPNGCVTKVTVQDLMVLRV*TMVDAN
Trigger: GTTCGCGTCCACCATGGTGCACACCCTCAACACCAT...CAAGTCCTGAACTGTCACCTTAGTGACACAACCATTGGGATGATGACCAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CCA 90 bp GGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATCAGCAGGTTAATGTCTaGCACCGACACCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: GHHSVEVFVLACVHFHTDQQVNV*HRHQNQ
Trigger: CTGGTTCTGGTGTCGGTGCCAGACATTAACCTGCTG...ATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CAA 90 bp AGGATCTTACATGTAAAGATGGGGCACTCAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: RILHVKMGHSISCTS*STSVRKSTVTSRSP
Trigger: TGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATGTAAGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR TCA 90 bp AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGCTGATACTGCATTCTTaGCATTCTAGAAGACTTCTG +
Preference number: 2 (lower is better)
Translates to: NPRSLNLLLASCTSSWLRLILHS*HSRRLL
Trigger: CAGAAGTCTTCTAGAATGTCAAGAATGCAGTATCAG...CCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR TCA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTCTTCCCGCTGGGCCTTaGGGAAGCTTGGTTTGCTTA +
Preference number: 2 (lower is better)
Translates to: VISLLGQGWTSFCRGLCALPAGP*GSLVCL
Trigger: TAAGCAAACCAAGCTTCCTCAAGGCCCAGCGGGAAG...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR TCA 90 bp GAGCCCCTGCATTTGTTTTTGGGTCCCAAGGTAAAGGCTCATCACTCAGGTCAGTCTGGTTTAACATTCTaGTGGGTTTCATGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: EPLHLFLGPKVKAHHSGQSGLTF*WVSCQH
Trigger: GTGCTGACATGAAACCCATCAGAATGTTAAACCAGA...CTGACCTGAGTGATGAGCCTTTACCTTGGGACCCAAAAACAAATGCAGGGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGGCCTTGATCAGGTATaGGTTGTTCTTCACGTCCAG +
Preference number: 2 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCGLDQV*VVLHVQ
Trigger: CTGGACGTGAAGAACAACCCATACCTGATCAAGGCC...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGTCACCAGGTCAAACTTaGTGCTTTCTGTCACAATGT +
Preference number: 2 (lower is better)
Translates to: SVEVFVLACVHFHTDVHMSPGQT*CFLSQC
Trigger: ACATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGA...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR GCA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGACACTCTCATTCTCTaGCCAGCATCTATGTCAATC +
Preference number: 2 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCDTLIL*PASMSI
Trigger: GATTGACATAGATGCTGGGCAGAGAATGAGAGTGTC...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CCA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTC +
Preference number: 2 (lower is better)
Translates to: VISLLGQGWTSFCRGLCAMSAIE*KMFSAF
Trigger: GAATGCAGAGAACATCTTCCATTCAATGGCAGACAT...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CCA 72 bp GTACTCGCCCAGTGGCTCCTGGCACATGGCGGCTCCTaGGCAAGCCCCAGAGGGTCAGGGCAGAGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: VLAQWLLAHGGS*ASPRGSGQRQQ
Trigger: CTGCTGCCTCTGCCCTGACCCTCTGGGGCTTGCCCAGGAGCCGCCATGTGCCAGGAGCCACTGGGCGAGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp CTACGGCCTGCCCAAGGCCGGGTAGGGAGACCGGATTaGAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGGT +
Preference number: 3 (lower is better)
Translates to: LRPAQGRVGRPD*REALLPLLGLG
Trigger: ACCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp TCACCAGGCAGTACTCGCCCAGTGGCTCCTGGCACATaGCGGCTCCTGGGCAAGCCCCAGAGGGTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: SPGSTRPVAPGT*RLLGKPQRVRA
Trigger: TGCCCTGACCCTCTGGGGCTTGCCCAGGAGCCGCCATGTGCCAGGAGCCACTGGGCGAGTACTGCCTGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp AGCCTGGGTGTTACTCACCAGGCAGTACTCGCCCAGTaGCTCCTGGCACATGGCGGCTCCTGGGCAAGCCCC +
Preference number: 3 (lower is better)
Translates to: SLGVTHQAVLAQ*LLAHGGSWASP
Trigger: GGGGCTTGCCCAGGAGCCGCCATGTGCCAGGAGCCACTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CAA 90 bp GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTCCAGGGCCGGTGAGATaGGATGCTGGCTCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: EPIPSPSLPWLVVGSSPAPGPVR*DAGSRW
Trigger: CCACCTGGAGCCAGCATCCAATCTCACCGGCCCTGG...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp CTCTGCCGGAGGTGGGCACCTGAAGCTCCGAGTGGTTaGCTCGGAGGTCAGGGCCATCAGGTGCACCTGGGT +
Preference number: 3 (lower is better)
Translates to: LCRRWAPEAPSG*LGGQGHQVHLG
Trigger: ACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR TCA 72 bp GAGGTTCTGGCTTTCCCGTCTCCTCCTGGGAGCGGCTaGGGGGTGAGCTGGCTGCCTAGTGCTGGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: EVLAFPSPPGSG*GVSWLPSAGSE
Trigger: CTCTGACCCAGCACTAGGCAGCCAGCTCACCCCTCAGCCGCTCCCAGGAGGAGACGGGAAAGCCAGAACCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 72 bp CTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTaGACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LRVVDSEVRAIR*TWVIRLACRGG
Trigger: TCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CCA 72 bp AGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTaGCTACGGCCTGCCCAAGGCCGGGTAGGGAGACCG +
Preference number: 3 (lower is better)
Translates to: SLNLLLASCTSS*LRPAQGRVGRP
Trigger: CGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp GCTGGGTCAGAGGGAGTACCGGGGTCTGCAGGTCCTTaGGCTGGTTCCTCAGCTGGAAGAGCTCGGTGGAGG +
Preference number: 3 (lower is better)
Translates to: AGSEGVPGSAGP*AGSSAGRARWR
Trigger: CCTCCACCGAGCTCTTCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCCCGGTACTCCCTCTGACCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 72 bp TTGAGGAGCAGGCGCTGCATGTGTGGAGGCGCCAAGTaGTGTGCTTGCCCAGGCAGCCGCTGCTTCTGCACA +
Preference number: 3 (lower is better)
Translates to: LRSRRCMCGGAK*CACPGSRCFCT
Trigger: TGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp CTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTaGAGGCAGGTTCTTAGGCTCCTTGTGGCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: LPTLAGGWVQPC*RQVLRLLVASA
Trigger: AGCTGAGGCCACAAGGAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CCA 72 bp GCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTaGGTCCAGCCCTGCTGGAGGCAGGTTCTTAGGCTC +
Preference number: 3 (lower is better)
Translates to: ANTIPLPTLAGG*VQPCWRQVLRL
Trigger: GAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CCA 72 bp TGCTGGGAGCCTGAGCAGCCAGGCCTTGGTGCCAGGTaGCAGAGAACTCGGTGGCTTCTTAGTGCCCCCTCT +
Preference number: 3 (lower is better)
Translates to: CWEPEQPGLGAR*QRTRWLLSAPS
Trigger: AGAGGGGGCACTAAGAAGCCACCGAGTTCTCTGCCACCTGGCACCAAGGCCTGGCTGCTCAGGCTCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp CTTGGAGCCTGGTCTTGCCTCCCAGTAGGACAAGGATaGTGCTGGGAGCCTGAGCAGCCAGGCCTTGGTGCC +
Preference number: 3 (lower is better)
Translates to: LGAWSCLPVGQG*CWEPEQPGLGA
Trigger: GGCACCAAGGCCTGGCTGCTCAGGCTCCCAGCATCATCCTTGTCCTACTGGGAGGCAAGACCAGGCTCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp GGGTTTAGTAGGTTGGCTCTGCCGGAGGTGGGCACCTaGAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: GFSRLALPEVGT*SSEWLTRRSGP
Trigger: TGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAGCCAACCTACTAAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 72 bp CTGGGTGCTCAGAAGCCCAGGGCCGGTGAGATTGGATaGTGGCTCCAGGTGGGCTCTGAAGACTTGCACTGG +
Preference number: 3 (lower is better)
Translates to: LGAQKPRAGEIG*WLQVGSEDLHW
Trigger: CCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCTCACCGGCCCTGGGCTTCTGAGCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp GCCCAGATCCCTTCCTCAGCCGAGCTGCGAAAGCACTaGAAGCACCTGGACCAAGCACTGCTAGGCGGAGAC +
Preference number: 3 (lower is better)
Translates to: AQIPSSAELRKH*KHLDQALLGGD
Trigger: GTCTCCGCCTAGCAGTGCTTGGTCCAGGTGCTTCCAGTGCTTTCGCAGCTCGGCTGAGGAAGGGATCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp GTGGTTGACTCGGAGGTCAGGGCCATCAGGTGCACCTaGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAAT +
Preference number: 3 (lower is better)
Translates to: VVDSEVRAIRCT*VIRLACRGGSN
Trigger: ATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp GATCCCCTCGCCCACTGCGCTGGTGTCTTACTTCCAGGTGCTGTTTCTGGACTTTACCCTGGCTGGTGGTaGGGTCCAGCCCTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: DPLAHCAGVLLPGAVSGLYPGWW*GPALLE
Trigger: CTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTA...AAGTCCAGAAACAGCACCTGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR GCA 72 bp AGCTCGGTGGAGGTGAGCAGGATGGTGTTGAGGGTGTaGACCATGGTGGACGCGAACTTGAGGTCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SSVEVSRMVLRV*TMVDANLRSSS
Trigger: GGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCACCTCCACCGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR GCA 72 bp GGAGGCGCCAAGTGCTGTGCTTGCCCAGGCAGCCGCTaGTTCTGCACATTTAGCCTGGGTGTTACTCACCAG +
Preference number: 3 (lower is better)
Translates to: GGAKCCACPGSR*FCTFSLGVTHQ
Trigger: CTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp CTTGCCCAGGCAGCCGCTGCTTCTGCACATTTAGCCTaGGTGTTACTCACCAGGCAGTACTCGCCCAGTGGC +
Preference number: 3 (lower is better)
Translates to: LAQAAAASAHLA*VLLTRQYSPSG
Trigger: GCCACTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp CAGGTCAGAGATGCTGCCAAGGAGCAAAGGCCCAGGTaGCCATCTAGGCTAGGAAGGTGGCTAGAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: QVRDAAKEQRPR*PSRLGRWLEPG
Trigger: CCCTGGCTCTAGCCACCTTCCTAGCCTAGATGGCCACCTGGGCCTTTGCTCCTTGGCAGCATCTCTGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp CAGCCAGGCCTTGGTGCCAGGTGGCAGAGAACTCGGTaGCTTCTTAGTGCCCCCTCTTATCCCAAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: QPGLGARWQRTR*LLSAPSYPKRQ
Trigger: CTGCCTCTTGGGATAAGAGGGGGCACTAAGAAGCCACCGAGTTCTCTGCCACCTGGCACCAAGGCCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp AGAAGAGGTTCTGGCTTTCCGGGGTCTGCAGGTCCTTaGGCTGGTTCCTCAGCTGGAAGAGCTCGGTGGAGG +
Preference number: 3 (lower is better)
Translates to: RRGSGFPGSAGP*AGSSAGRARWR
Trigger: CCTCCACCGAGCTCTTCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCCCGGAAAGCCAGAACCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp TTATCTGGAGTGCTGCCTGCTTTGAGGAGCAGGCGCTaGATGTGTGGAGGCGCCAAGTGCTGTGCTTGCCCA +
Preference number: 3 (lower is better)
Translates to: LSGVLPALRSRR*MCGGAKCCACP
Trigger: TGGGCAAGCACAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp AGTGTAGCTGACAGTGCTGGGGTCCAGGTGCTCTGCTaGGAGGAGCTGAGGCTGACAGAGCCAATACCATCC +
Preference number: 3 (lower is better)
Translates to: SVADSAGVQVLC*EELRLTEPIPS
Trigger: GGATGGTATTGGCTCTGTCAGCCTCAGCTCCTCCCAGCAGAGCACCTGGACCCCAGCACTGTCAGCTACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CCA 72 bp AGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTaGCCTGCAGGGGAGGAAGCAATTTCTGCCAACACT +
Preference number: 3 (lower is better)
Translates to: RSGPSGAPGSSV*PAGEEAISANT
Trigger: AGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGATACCCTGGCTGGTGGTaGGGTCCAGCCCTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: ASALGPRSSSSHRQGLERYPGWW*GPALLE
Trigger: CTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTA...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp AGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAGGATGTCTGCCATaGAATGGAAGATGTTCTCTG +
Preference number: 3 (lower is better)
Translates to: RSGPSGAPGSSVWPAGEEAGCLP*NGRCSL
Trigger: CAGAGAACATCTTCCATTCAATGGCAGACATCCTGC...TTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp TTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGGTGAGCAGGATGGTGTaGAGGGTGTGCACCATGGTG +
Preference number: 3 (lower is better)
Translates to: FLGLGGRFQTVFSLQQLRVSRMV*RVCTMV
Trigger: CACCATGGTGCACACCCTCAACACCATCCTGCTCAC...CCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR GCA 72 bp GTAGGCTTTGGACAGGCTGAGGTCTTTCTCCTGTTCTaGTGTCTCCAGGGCCTGAGCCATGGCAGCACCAGT +
Preference number: 3 (lower is better)
Translates to: VGFGQAEVFLLF*CLQGLSHGSTS
Trigger: ACTGGTGCTGCCATGGCTCAGGCCCTGGAGACAGCAGAACAGGAGAAAGACCTCAGCCTGTCCAAAGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp TCCAGCCCTGCTGGAGGCAGGTTCTTAGGCTCCTTGTaGCCTCAGCTTAGAGACCCTGAGTGCTTCTTAGGC +
Preference number: 3 (lower is better)
Translates to: SSPAGGRFLGSL*PQLRDPECFLG
Trigger: GCCTAAGAAGCACTCAGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCTGCCTCCAGCAGGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CCA 72 bp GGATGCTGGCTCCAGGTGGGCTCTGAAGACTTGCACTaGAGGATGCTCAGCCAGCTGGAGGAACAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: GCWLQVGSEDLH*RMLSQLEEQGE
Trigger: TTCTCCTTGTTCCTCCAGCTGGCTGAGCATCCTCCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp CACTGTAAACACACGTGTGTTATCTGGAGTGCTGCCTaGTTTGAGGAGCAGGCGCTGCATGTGTGGAGGCGC +
Preference number: 3 (lower is better)
Translates to: HCKHTCVIWSAA*FEEQALHVWRR
Trigger: GCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAACACACGTGTGTTTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp AGATTGGATGCTGGCTCCAGGTGGGCTCTGAAGACTTaGACTGGAGGATGCTCAGCCAGCTGGAGGAACAAG +
Preference number: 3 (lower is better)
Translates to: RLDAGSRWALKT*TGGCSASWRNK
Trigger: CTTGTTCCTCCAGCTGGCTGAGCATCCTCCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp TGCTGCTGGGTTAAGCCTACCTTCCCCAGGCTCAGCTaGTTCCTTATAATGAGGGCTGGGGGCTTGCAGAGT +
Preference number: 3 (lower is better)
Translates to: CCWVKPTFPRLS*FLIMRAGGLQS
Trigger: ACTCTGCAAGCCCCCAGCCCTCATTATAAGGAAGCAGCTGAGCCTGGGGAAGGTAGGCTTAACCCAGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp TTTCAAAGTGCTGCAGCAGCTCTGTGTAGTCGATGCTaGGGGAGTCACCTTTCTGGGACTTGGGGGCCGCTT +
Preference number: 3 (lower is better)
Translates to: FQSAAAALCSRC*GSHLSGTWGPL
Trigger: AAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCCCCAGCATCGACTACACAGAGCTGCTGCAGCACTTTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGC +
Preference number: 3 (lower is better)
Translates to: HRGTAHGRLWFNILMGFMMVDAN*RSSSRS
Trigger: GCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCAT...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CAA 90 bp GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGGTGAGCAGGATGGTGTaGAGGGTGTGCACCATGGTG +
Preference number: 3 (lower is better)
Translates to: GPRSSSSHRQGLERGCFWVSRMV*RVCTMV
Trigger: CACCATGGTGCACACCCTCAACACCATCCTGCTCAC...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR GCA 72 bp TCCCCTCGCCCACTGCGCTGGTGTCTTACTTCCAGGTaGTGTTTCTGGACTTTTTCAAAGTGCTGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: SPRPLRWCLTSR*CFWTFSKCCSS
Trigger: GCTGCTGCAGCACTTTGAAAAAGTCCAGAAACAGCACCTGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CCA 72 bp TGGGGAGGGCATCGAGGGACAGCCCATGGCAGGCTCTaGTTTAACATTCTGATGGGTTTCATGTCAGCACTG +
Preference number: 3 (lower is better)
Translates to: WGGHRGTAHGRL*FNILMGFMSAL
Trigger: CAGTGCTGACATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATGCCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp GCTCTGAAGACTTGCACTGGAGGATGCTCAGCCAGCTaGAGGAACAAGGAGAAGCATCTGCTGGGGTTACAG +
Preference number: 3 (lower is better)
Translates to: ALKTCTGGCSAS*RNKEKHLLGLQ
Trigger: CTGTAACCCCAGCAGATGCTTCTCCTTGTTCCTCCAGCTGGCTGAGCATCCTCCAGTGCAAGTCTTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CAA 90 bp CTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATCGGTCCCAGAGGTTCTTAGGCTCCTaGTGGCCTCAGCTTAGAGAC +
Preference number: 3 (lower is better)
Translates to: LLDSEAVVPTQERIHRSQRFLGS*WPQLRD
Trigger: GTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCT...CTGGGACCGATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp CCTGAGGGGCTCTCAGGCAGTGACACACTAGGCAAGGTAGGCTTTGGACAGGCTGCAGGATGTCTGCCATaGAATGGAAGATGTTCTCTG +
Preference number: 3 (lower is better)
Translates to: PEGLSGSDTLGKVGFGQAAGCLP*NGRCSL
Trigger: CAGAGAACATCTTCCATTCAATGGCAGACATCCTGC...AGCCTGTCCAAAGCCTACCTTGCCTAGTGTGTCACTGCCTGAGAGCCCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CAA 90 bp GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCGGAAGGGGGAAATTCTaGAGCCCCTGCATTTGTTTT +
Preference number: 3 (lower is better)
Translates to: EQDGVEGVHHGGRELEVLGRGKF*SPCICF
Trigger: AAAACAAATGCAGGGGCTCAAGAATTTCCCCCTTCC...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CAA 90 bp GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCGAACTGTCGGGCGTATaGGTTGTTGGAGTAAATCCT +
Preference number: 3 (lower is better)
Translates to: EQDGVEGVHHGGRELEVLELSGV*VVGVNP
Trigger: AGGATTTACTCCAACAACCAATACGCCCGACAGTTC...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCATTTTCCGAATCTCCTaGCCATTGTCACCCAGGATC +
Preference number: 3 (lower is better)
Translates to: EQDGVEGVHHGGRELEVLIFRIS*PLSPRI
Trigger: GATCCTGGGTGACAATGGCAAGGAGATTCGGAAAAT...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR TCA 72 bp ATCCTCAGGGTTGGGTTCGGTCTGCTTCTGTGCTACTaGCTTTGGCTCATCGGGTTCATCATCCTCAGGGGT +
Preference number: 3 (lower is better)
Translates to: ILRVGFGLLLCY*LWLIGFIILRG
Trigger: ACCCCTGAGGATGATGAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR TCA 72 bp CAGGTGCAGGGTCACTGGAGCCCTATCAGTGTTGGCTaGGGTGAAGACATTGATGCCACTTCCAAAGCTGGA +
Preference number: 3 (lower is better)
Translates to: QVQGHWSPISVG*GEDIDATSKAG
Trigger: TCCAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 72 bp TTGATCAGGTATGGGTTGTTCTTCACGTCCAGCAGTTaGAGGCGTAGATCTGCAGCAGGGCAGAAGTCAGGG +
Preference number: 3 (lower is better)
Translates to: LIRYGLFFTSSS*RRRSAAGQKSG
Trigger: CCCTGACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp TGCTTTGGCAGGGAATCCTCAGGGTTGGGTTCGGTCTaGTTCTGTGCTACTGACTTTGGCTCATCGGGTTCA +
Preference number: 3 (lower is better)
Translates to: CFGRESSGLGSV*FCATDFGSSGS
Trigger: TGAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CCA 72 bp AGGTCCTCCTCCCGAAGCAGGATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTCAGCAGGAGGCAGAGC +
Preference number: 3 (lower is better)
Translates to: RSSSRSRMSAIE*KMFSAFSRRQS
Trigger: GCTCTGCCTCCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGAGGAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CCA 72 bp GCTCAGCCAGCTGGAGGAACAAGGAGAAGCATCTGCTaGGGTTACAGACGAGTTCATCTGCAAGTGTGTGCA +
Preference number: 3 (lower is better)
Translates to: AQPAGGTRRSIC*GYRRVHLQVCA
Trigger: TGCACACACTTGCAGATGAACTCGTCTGTAACCCCAGCAGATGCTTCTCCTTGTTCCTCCAGCTGGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CCA 72 bp CAGAGAGTAGACCTTTCAGAGAGGAGACCTGCATCTTaGAGCCTGGTCTTGCCTCCCAGTAGGACAAGGATG +
Preference number: 3 (lower is better)
Translates to: QRVDLSERRPAS*SLVLPPSRTRM
Trigger: CATCCTTGTCCTACTGGGAGGCAAGACCAGGCTCCAAGATGCAGGTCTCCTCTCTGAAAGGTCTACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CAA 90 bp TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGAGGTTCTTAGGCTCCTaGTGGCCTCAGCTTAGAGAC +
Preference number: 3 (lower is better)
Translates to: CSGAKVKLFSQTGIRKRLRFLGS*WPQLRD
Trigger: GTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCT...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR TCA 72 bp GTGACCCATTTTGAGGAAACAGACAAAACTAAGTTCTaGTGCCACGGCCCTGTCCCACTGCAGCTGGCCCTT +
Preference number: 3 (lower is better)
Translates to: VTHFEETDKTKF*CHGPVPLQLAL
Trigger: AAGGGCCAGCTGCAGTGGGACAGGGCCGTGGCATCAGAACTTAGTTTTGTCTGTTTCCTCAAAATGGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp GAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTaGTGGGTTTCATGTCAGCACTGGCCTGTGTGTATG +
Preference number: 3 (lower is better)
Translates to: EGQPMAGSGLTF*WVSCQHWPVCM
Trigger: CATACACACAGGCCAGTGCTGACATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp ATTCTCTGCCCAGCATCTATGTCAATCCTAGAAGTCTaGACCTGCTTCTGGCCAGCTGCACCTCATCGTGGC +
Preference number: 3 (lower is better)
Translates to: ILCPASMSILEV*TCFWPAAPHRG
Trigger: GCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATTGACATAGATGCTGGGCAGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp ACCATGTACACAGCTGTGGAGAAGCCTGAACCTACTTaGAGTTCTTTCTTCCCGCTGGGCCTTGAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: TMYTAVEKPEPT*SSFFPLGLEEA
Trigger: AGCTTCCTCAAGGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp GATGCTCAGCCAGCTGGAGGAACAAGGAGAAGCATCTaGTGGGGTTACAGACGAGTTCATCTGCAAGTGTGT +
Preference number: 3 (lower is better)
Translates to: DAQPAGGTRRSI*WGYRRVHLQVC
Trigger: ACACACTTGCAGATGAACTCGTCTGTAACCCCAGCAGATGCTTCTCCTTGTTCCTCCAGCTGGCTGAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp GTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTCTaGCAACACTTCCAGATCCTTCAAGACAACCTCATC +
Preference number: 3 (lower is better)
Translates to: VIRLACRGGSNF*QHFQILQDNLI
Trigger: GATGAGGTTGTCTTGAAGGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CCA 72 bp GCTTCTCCACTACACTGTAAACACACGTGTGTTATCTaGAGTGCTGCCTGCTTTGAGGAGCAGGCGCTGCAT +
Preference number: 3 (lower is better)
Translates to: ASPLHCKHTCVI*SAACFEEQALH
Trigger: ATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAACACACGTGTGTTTACAGTGTAGTGGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CAA 90 bp ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGC +
Preference number: 3 (lower is better)
Translates to: TSFCRGLCAGLCAFPHRCMVDAN*RSSSRS
Trigger: GCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCAT...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp GGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGGCAGAAGTATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAA +
Preference number: 3 (lower is better)
Translates to: GCSSRPAVAGVDLQQGRSISCTS*STSVRK
Trigger: TTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAAT...ACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR-3UTR CAA 90 bp GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGACTCACCAGGTCAAACTaGCTGCTTTCTGTCACAATG +
Preference number: 3 (lower is better)
Translates to: ASALGPRSSSSHRQGLERLTRSN*LLSVTM
Trigger: CATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGAG...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp AGGTGCAGGGTCACTGGAGCCCTATCAGTGTTGGCTGAGGTGAAGACATTGATGTCTGTGATTTCTTTATaGGGGCAGGGATGGACATCA +
Preference number: 3 (lower is better)
Translates to: RCRVTGALSVLAEVKTLMSVISL*GQGWTS
Trigger: TGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA...CATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTTCTTGGAGCCTGGTCTaGCCTCCCAGTAGGACAAGG +
Preference number: 3 (lower is better)
Translates to: VISLLGQGWTSFCRGLCASWSLV*PPSRTR
Trigger: CCTTGTCCTACTGGGAGGCAAGACCAGGCTCCAAGA...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp TCCAGGCCAGCAGAAGGCAAGGTAGATCTATGGCCCTaGCAGGATCTTACATGTAAAGATGGGGCACTCAAT +
Preference number: 3 (lower is better)
Translates to: SRPAEGKVDLWP*QDLTCKDGALN
Trigger: ATTGAGTGCCCCATCTTTACATGTAAGATCCTGTCAGGGCCATAGATCTACCTTGCCTTCTGCTGGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp AGCCTCAAACTCAGAGATATATCTGTCTCTGCCTCCTaGGTGCTGGGATTAAAGGTGTGTGTCTCCACTGCC +
Preference number: 3 (lower is better)
Translates to: SLKLRDISVSAS*VLGLKVCVSTA
Trigger: GGCAGTGGAGACACACACCTTTAATCCCAGCACTCAGGAGGCAGAGACAGATATATCTCTGAGTTTGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp GAGGCGCACACCAAAGCTCAGAGTGTCCAGGAGATTTaGATATCCAAGTTAGACGTAGCCACTTACCACCTC +
Preference number: 3 (lower is better)
Translates to: EAHTKAQSVQEI*ISKLDVATYHL
Trigger: GAGGTGGTAAGTGGCTACGTCTAACTTGGATATTCAAATCTCCTGGACACTCTGAGCTTTGGTGTGCGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp CTCCTGAGTGCTGGGATTAAAGGTGTGTGTCTCCACTaGCCGGCTAGGAAAACTTTTTACCATGTACACAGC +
Preference number: 3 (lower is better)
Translates to: LLSAGIKGVCLH*PARKTFYHVHS
Trigger: GCTGTGTACATGGTAAAAAGTTTTCCTAGCCGGGCAGTGGAGACACACACCTTTAATCCCAGCACTCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp GGCTGTCTGTGTGCCGGAACATCTTTCGAGGAGTTTTaGTGTAGAGATGGTAGAGCCACTTCAGAACAGCAA +
Preference number: 3 (lower is better)
Translates to: GCLCAGTSFEEF*CRDGRATSEQQ
Trigger: TTGCTGTTCTGAAGTGGCTCTACCATCTCTACATCAAAACTCCTCGAAAGATGTTCCGGCACACAGACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTAGGTTCTTAGGCTCCTaGTGGCCTCAGCTTAGAGAC +
Preference number: 3 (lower is better)
Translates to: VISLLGQGWTSFCRGLCARFLGS*WPQLRD
Trigger: GTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCT...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR TCA 72 bp TCATCAAGCTCTGGTTACACACATTGGCCACCTCCTTaGTACTTTTCTTGCGGTCATCATAGGCCAAGCATG +
Preference number: 3 (lower is better)
Translates to: SSSSGYTHWPPP*YFSCGHHRPSM
Trigger: CATGCTTGGCCTATGATGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATGTGTGTAACCAGAGCTTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR TCA 72 bp TTCAAGACAACCTCATCAGATTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGGCTGTCTGTGTGCCGG +
Preference number: 3 (lower is better)
Translates to: FKTTSSDSSDNV*SKMGKRLSVCR
Trigger: CCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTTGTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR GCA 72 bp AGGCGTAGATATGTAAAGATGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCTGTGAGGAAATCCACT +
Preference number: 3 (lower is better)
Translates to: RRRYVKMGHSIS*TSLSTSVRKST
Trigger: AGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATATCTACGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CCA 72 bp CCTCATCAGATTCGTCAGATAATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTTC +
Preference number: 3 (lower is better)
Translates to: PHQIRQIMSEVR*GRGCLCAGTSF
Trigger: GAAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR-3UTR CAA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTGAGGTGAAGACATaGATGCCACTTCCAAAGCTG +
Preference number: 3 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCAEVKT*MPLPKL
Trigger: CAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGC...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR TCA 72 bp TATCACCAATTGCCACCTTCTCTGATACTGCATTCTTaGCATTCTAGAAGACTTCTGGGTGCATCGCCCTCT +
Preference number: 3 (lower is better)
Translates to: YHQLPPSLILHS*HSRRLLGASPS
Trigger: AGAGGGCGATGCACCCAGAAGTCTTCTAGAATGTCAAGAATGCAGTATCAGAGAAGGTGGCAATTGGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR TCA 72 bp TGCAGCTGGCCCTTTATCACCAATTGCCACCTTCTCTaGTACTGCATTCTTGACATTCTAGAAGACTTCTGG +
Preference number: 3 (lower is better)
Translates to: CSWPFITNCHLL*YCILDILEDFW
Trigger: CCAGAAGTCTTCTAGAATGTCAAGAATGCAGTATCAGAGAAGGTGGCAATTGGTGATAAAGGGCCAGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp AGGATCTTACATGTAAAGATGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCTGTGAGGAAATCCACT +
Preference number: 3 (lower is better)
Translates to: RILHVKMGHSIS*TSLSTSVRKST
Trigger: AGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATGTAAGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR GCA 72 bp TTGATCAGGTATGGGTTGTTCTTCACGTCCAGCAGTTaGAGGCGTAGATATGTAAAGATGGGGCACTCAATT +
Preference number: 3 (lower is better)
Translates to: LIRYGLFFTSSS*RRRYVKMGHSI
Trigger: AATTGAGTGCCCCATCTTTACATATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
3UTR CAA 72 bp GCTACGGCCTGCCCAAGGCCGGGTAGGGAGACCGGATaGCAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ATACPRPGRETG*QRGSPSPPGPR
Trigger: CCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGAGAGGGACACGGTGGTaGCTGGGTTGTGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SQYHPPPYPGWWLGPALLRGTRW*LGCGTR
Trigger: CCTGGTGCCACAACCCAGTCACCACCGTGTCCCTCT...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR TCA 90 bp GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTTCTGGGGCAACAGCATaGGCAGGCCGTACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EPIPSPSLPWLVVGSSPASGATA*AGRTGP
Trigger: AGGCCCTGTACGGCCTGCTCATGCTGTTGCCCCAGA...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR TCA 90 bp GAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCGGCCCGCCAGCTGGATaGATTCCCGCATCCAGCACA +
Preference number: 4 (lower is better)
Translates to: EADRANTIPLPTLAGGWVGPPAG*IPASST
Trigger: TGTGCTGGATGCGGGAATTCATCCAGCTGGCGGGCC...GACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGGAAGCTCCGAGTGGTTaGCTCGGAGGTCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QSQYHPPPYPGWWLGPALEAPSG*LGGQGH
Trigger: ATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTC...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR TCA 90 bp AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGGGGTCTGCAGGTCCTTaGGCTGGTTCCTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SQYHPPPYPGWWLGPALLGSAGP*AGSSAG
Trigger: TCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCC...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp GGTGAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCCCCCTTTCCGGCTGTaGGGGTGCTGGGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: GEQDGVEGVHHGGRELEVPPFRL*GCWDRA
Trigger: TGCCCTGTCCCAGCACCCCCACAGCCGGAAAGGGGG...GACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CCA 90 bp AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGGTGGTGACTGGGTTGTaGCACCAGGAGCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: SQYHPPPYPGWWLGPALLVVTGL*HQERYR
Trigger: CCTGTACCGCTCCTGGTGCCACAACCCAGTCACCAC...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
3UTR CAA 72 bp TGGGTGAGGAAGCAGAGGGACACGGTGGTGACTGGGTaGTGGCACCAGGAGCGGTACAGGCAGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: WVRKQRDTVVTG*WHQERYRQQKR
Trigger: CCTCTTCTGCTGCCTGTACCGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCCCTCTGCTTCCTCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CAA 72 bp TGCTGGGTCAGAGGGAGTACCGGGGTCTGCAGGTCCTaGAGCTGGTTCCTCAGCTGGAAGAGCTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CWVRGSTGVCRS*SWFLSWKSSVE
Trigger: CTCCACCGAGCTCTTCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCCCGGTACTCCCTCTGACCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCACCTCGGGCCACTTTaGCGATATTGTAGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QSQYHPPPYPGWWLGPALHLGPL*RYCRGP
Trigger: AGGCCCTCTACAATATCGTCAAAGTGGCCCGAGGTG...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CCA 90 bp GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTTGTCCCCTCCTGCTTTaGCAGGGAATCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: EPIPSPSLPWLVVGSSPACPLLL*QGILRV
Trigger: AACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGACA...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGGCTCTGTGTAGTCGATaGTGGGGGAGTCACCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQYHPPPYPGWWLGPALLALCSR*WGSHLS
Trigger: AGAAAGGTGACTCCCCCAGCATCGACTACACAGAGC...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
3UTR CAA 72 bp TATAGCTGGGTGCTCAGAAGCCCAGGGCCGGTGAGATaGGATGCTGGCTCCAGGTGGGCTCTGAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: YSWVLRSPGPVR*DAGSRWALKTC
Trigger: GCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCTCACCGGCCCTGGGCTTCTGAGCACCCAGCTATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGAGGCTGCCAGACCGATaGGGCCCCCTTTCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPRSSSSHRQGLERGCFWRLPDR*GPLSGC
Trigger: ACAGCCGGAAAGGGGGCCTCATCGGTCTGGCAGCCT...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp GAGCTGCCTGATGATGAACGGGCCTCTGGCCTCCAGGAGCTTCCGTTCACTGCTCACCTCGGGCCACTTTaGCGATATTGTAGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ELPDDERASGLQELPFTAHLGPL*RYCRGP
Trigger: AGGCCCTCTACAATATCGTCAAAGTGGCCCGAGGTG...AGCAGTGAACGGAAGCTCCTGGAGGCCAGAGGCCCGTTCATCATCAGGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGCCTATCAGTGTTGGCTaGGGTGAAGACATTGATGCC +
Preference number: 4 (lower is better)
Translates to: SQYHPPPYPGWWLGPALLPISVG*GEDIDA
Trigger: GGCATCAATGTCTTCACCTCAGCCAACACTGATAGG...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGGCAATAGAGCAGGCTaGCAGACCGATGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HHASALGPRSSSSHRQGLGNRAG*QTDEAP
Trigger: GGGGGCCTCATCGGTCTGGCAGCCTGCTCTATTGCC...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGCAGGATGTCTGCCATTaGATGGAAGATGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SQYHPPPYPGWWLGPALLQDVCH*MEDVLC
Trigger: GCAGAGAACATCTTCCATTCAATGGCAGACATCCTG...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp TCCCGAAGCAGGATGTCTGCCATTGAATGGAAGATGTTCTCTGCATTCAGCAGGCCCCCTTTCCGGCTGTaGGGGTGCTGGGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: SRSRMSAIEWKMFSAFSRPPFRL*GCWDRA
Trigger: TGCCCTGTCCCAGCACCCCCACAGCCGGAAAGGGGG...CCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CCA 90 bp CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGGGATCACCAGGATGTTaGCCATCTCAGCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: QSQYHPPPYPGWWLGPALGSPGC*PSQQTS
Trigger: TGAAGTTTGCTGAGATGGCCAACATCCTGGTGATCC...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGAACCTGGACCTCCACTaGCTGTCCCCTCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: HTHHASALGPRSSSSHRQNLDLH*LSPPAL
Trigger: CAAAGCAGGAGGGGACAGCCAGTGGAGGTCCAGGTT...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGCAGCAGAAGAGGTTCTaGCTTTCCGGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HTHHASALGPRSSSSHRQQQKRF*LSGVCR
Trigger: CCTGCAGACCCCGGAAAGCCAGAACCTCTTCTGCTG...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
3UTR CAA 72 bp GGGTCCAGCCCTGCTGGAGGCAGGTTCTTAGGCTCCTaGTGGCCTCAGCTTAGAGACCCTGAGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: GSSPAGGRFLGS*WPQLRDPECFL
Trigger: TAAGAAGCACTCAGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp GGAGCTGAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTCATTGGCCACCTCCTTaGTACTTTTCTTGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: GAEADRANTIPLPTLAGGHWPPP*YFSCGH
Trigger: ATGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATG...ACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp GGGAGACCGGATTGCAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGGTAGTAGCTCTTTCGAGGAGTTTTaGTGTAGAGATGGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: GRPDCREALLPLLGLGSSSFEEF*CRDGRA
Trigger: GGCTCTACCATCTCTACATCAAAACTCCTCGAAAGA...GCTACTACCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SQYHPPPYPGWWLGPALLSSDNV*SKMGKR
Trigger: CCTCTTCCCCATCTTACTTCAGACATTATCTGACGA...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGATGGTGGACGCGAACTTaGGGTCCTCCTCCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: ASALGPRSSSSHRQGLERWWTRT*GPPPEA
Trigger: TGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCA...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR GCA 90 bp CGCCAGCTGGATGAATTCCCGCATCCAGCACATAGCCGTCAGCTGAATCAGGTCAAGAGAACATTGAAGTaGGGCAGCACGGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: RQLDEFPHPAHSRQLNQVKRTLK*GSTAPR
Trigger: CCGAGGTGCCGTGCTGCCGCACTTCAATGTTCTCTT...GACCTGATTCAGCTGACGGCTATGTGCTGGATGCGGGAATTCATCCAGCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGAGTCATCCGTCTGGCCTaGAGGGGAGGAAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: THHASALGPRSSSSHRQGVIRLA*RGGSNF
Trigger: GAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGAC...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp TTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCCCCTTTCCGGCTGTaGGGGTGCTGGGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: FSQTGIRKRLLLDSEAVVPPFRL*GCWDRA
Trigger: TGCCCTGTCCCAGCACCCCCACAGCCGGAAAGGGGG...GACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CCA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCACCCGGCCCGCCAGCTaGATGAATTCCCGCATCCAG +
Preference number: 4 (lower is better)
Translates to: RKRLLLDSEAVVPTQERITRPAS*MNSRIQ
Trigger: CTGGATGCGGGAATTCATCCAGCTGGCGGGCCGGGT...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGAACCTGGACCTCCACTaGCTGTCCCCTCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: NPRSLNLLLASCTSSWLRNLDLH*LSPPAL
Trigger: CAAAGCAGGAGGGGACAGCCAGTGGAGGTCCAGGTT...CCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGAAGTTCATGGTGGGAGTaGAGGGGGAGCCTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: THHASALGPRSSSSHRQGSSWWE*RGSLLS
Trigger: GCTTAGAAGGCTCCCCCTCCACTCCCACCATGAACT...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
3UTR CAA 72 bp ATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGCAGGATGTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: MVLRVCTMVDAN*RSSSRSRMSAI
Trigger: AATGGCAGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
3UTR CAA 72 bp GTAAACACACGTGTGTTATCTGGAGTGCTGCCTGCTTaGAGGAGCAGGCGCTGCATGTGTGGAGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: VNTRVLSGVLPA*RSRRCMCGGAK
Trigger: CTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAACACACGTGTGTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CAA 72 bp GAGATTGGATGCTGGCTCCAGGTGGGCTCTGAAGACTaGCACTGGAGGATGCTCAGCCAGCTGGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: EIGCWLQVGSED*HWRMLSQLEEQ
Trigger: TTGTTCCTCCAGCTGGCTGAGCATCCTCCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CAA 72 bp AGGCTCAGCTGCTTCCTTATAATGAGGGCTGGGGGCTaGCAGAGTAACAGATTCCCCAGTTGGCGCTGCACG +
Preference number: 4 (lower is better)
Translates to: RLSCFLIMRAGG*QSNRFPSWRCT
Trigger: CGTGCAGCGCCAACTGGGGAATCTGTTACTCTGCAAGCCCCCAGCCCTCATTATAAGGAAGCAGCTGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CAA 72 bp CTCTGGGGCAACAGCATGAGCAGGCCGTACAGGGCCTaGATCAGGTATGGGTTGTTCTTCACGTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LWGNSMSRPYRA*IRYGLFFTSSS
Trigger: ACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCATGCTGTTGCCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGAGGCTGCCAGACCGATaGGGCCCCCTTTCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSSHRQGLERGCFWILRRLPDR*GPLSGC
Trigger: ACAGCCGGAAAGGGGGCCTCATCGGTCTGGCAGCCT...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGCCCGCAAAAGGGGGATaGAGCTCACCAGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: NPRSLNLLLASCTSSWLRPAKGG*SSPGQT
Trigger: AGTTTGACCTGGTGAGCTTCATCCCCCTTTTGCGGG...CCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGACTGCTTCTGTGCTACTaGCTTTGGCTCATCGGGTTC +
Preference number: 4 (lower is better)
Translates to: THHASALGPRSSSSHRQGLLLCY*LWLIGF
Trigger: GAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAG...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp GGAGGGCATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTCTGCTTCTGTGCTACTaGCTTTGGCTCATCGGGTTC +
Preference number: 4 (lower is better)
Translates to: GGHRGTAHGRLWFNILMGLLLCY*LWLIGF
Trigger: GAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAG...ACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp GAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCTCTTTCGAGGAGTTTTaGTGTAGAGATGGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: EADRANTIPLPTLAGGWVSFEEF*CRDGRA
Trigger: GGCTCTACCATCTCTACATCAAAACTCCTCGAAAGA...GACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp GGATGGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACCCGGAGGTGGGCACCTaGAGCTCCGAGTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: GWTSFCRGLCAGLCAFPHPEVGT*SSEWLT
Trigger: AGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGG...GTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR GCA 90 bp ATGTACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCAATAGAGCAGGCTaGCAGACCGATGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: MYTAVEKPEPTCSSFFPLGNRAG*QTDEAP
Trigger: GGGGGCCTCATCGGTCTGGCAGCCTGCTCTATTGCC...CAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGACAATCCCGTCCAGGTaGAGGGTCACTGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: GPRSSSSHRQGLERGCFWTIPSR*RVTGAL
Trigger: TAGGGCTCCAGTGACCCTGCACCTGGACGGGATTGT...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: HTPCQCSGAKVKLFSQTGGHSIS*TSLSTS
Trigger: AGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCC...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR GCA 90 bp GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGATCCCCTCGCCCACTaGGCTGGTGTCTTACTTCCA +
Preference number: 4 (lower is better)
Translates to: ASALGPRSSSSHRQGLERDPLAH*AGVLLP
Trigger: TGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGATC...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp GGAGCTGAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTCAGAACAGCAATCCTaGTCATCATCCCAATGGTTG +
Preference number: 4 (lower is better)
Translates to: GAEADRANTIPLPTLAGGSEQQS*SSSQWL
Trigger: CAACCATTGGGATGATGACCAGGATTGCTGTTCTGA...ACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
3UTR CAA 72 bp CCGTCCAGGTGCAGGGTCACTGGAGCCCTATCAGTGTaGGCTGAGGTGAAGACATTGATGCCACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSRCRVTGALSV*AEVKTLMPLPK
Trigger: CTTTGGAAGTGGCATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCACCTGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCGACAGGGCAAACTCCTaGGACAGGGTCTGGATCACG +
Preference number: 4 (lower is better)
Translates to: RKRLLLDSEAVVPTQERIDRANS*DRVWIT
Trigger: CGTGATCCAGACCCTGTCTCAGGAGTTTGCCCTGTC...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCACCTCGGGCCACTTTaGCGATATTGTAGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: CSGAKVKLFSQTGIRKRLHLGPL*RYCRGP
Trigger: AGGCCCTCTACAATATCGTCAAAGTGGCCCGAGGTG...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGACCCGCAAAAGGGGGATaGAGCTCACCAGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: ASALGPRSSSSHRQGLERPAKGG*SSPGQT
Trigger: AGTTTGACCTGGTGAGCTTCATCCCCCTTTTGCGGG...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp CTTAGAACAGCTGGTCCTTTAAATGTGAGGGAGCTGGGGAAGGGGGAAATTCTTGGCCCGCCAGCTGGATaGATTCCCGCATCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LRTAGPLNVRELGKGEILGPPAG*IPASST
Trigger: TGTGCTGGATGCGGGAATTCATCCAGCTGGCGGGCC...AAGAATTTCCCCCTTCCCCAGCTCCCTCACATTTAAAGGACCAGCTGTTCTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGCATTGGCCACCTCCTTaGTACTTTTCTTGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: HTPCQCSGAKVKLFSQTGHWPPP*YFSCGH
Trigger: ATGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATG...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp ACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCCATCATCCTCAGGGGTaGCCAGCTTCATCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TQLWRSLNLLAVLSSRWAHHPQG*PASSSS
Trigger: AGAGCTTGATGAAGCTGGTCACCCCTGAGGATGATG...GGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTACTCGATCTCCAGCGCTaGAACCTTCCGCTTTTCGTA +
Preference number: 4 (lower is better)
Translates to: HHASALGPRSSSSHRQGLLDLQR*NLPLFV
Trigger: TACGAAAAGCGGAAGGTTGCAGCGCTGGAGATCGAG...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGAAGAGAACATTGAAGTaGGGCAGCACGGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: GPRSSSSHRQGLERGCFWKRTLK*GSTAPR
Trigger: CCGAGGTGCCGTGCTGCCGCACTTCAATGTTCTCTT...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp GCTGAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGTCACCAGGTCAAACTTaGTGCTTTCTGTCACAATGT +
Preference number: 4 (lower is better)
Translates to: AEADRANTIPLPTLAGGWSPGQT*CFLSQC
Trigger: ACATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGA...CCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCTGGCTGTCCCCTCCTaGTTTGGCAGGGAATCCTCA +
Preference number: 4 (lower is better)
Translates to: RKRLLLDSEAVVPTQERILAVPS*FGRESS
Trigger: TGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAG...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGACAATCCCGTCCAGGTaGAGGGTCACTGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: HRGTAHGRLWFNILMGFMTIPSR*RVTGAL
Trigger: TAGGGCTCCAGTGACCCTGCACCTGGACGGGATTGT...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGAGACAGTCTTCAGTCTaGAGCAGCTCAGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: CSGAKVKLFSQTGIRKRLRQSSV*SSSGLG
Trigger: GCCCAACCCTGAGCTGCTGCAGACTGAAGACTGTCT...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp ACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCCAGCAGGTTAATGTCTaGCACCGACACCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: TQLWRSLNLLAVLSSRWAQQVNV*HRHQNQ
Trigger: CTGGTTCTGGTGTCGGTGCCAGACATTAACCTGCTG...GGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp TTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGGAATCAGGTCATCTGTaGTCTGGCAGTGGATCACCA +
Preference number: 4 (lower is better)
Translates to: FLGLGGRFQTVFSLQQLRESGHL*SGSGSP
Trigger: TGGTGATCCACTGCCAGACCACAGATGACCTGATTC...CCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGCACCTTTCTGGGACTTaGGGGCCGCTTTCAGACAGT +
Preference number: 4 (lower is better)
Translates to: GPRSSSSHRQGLERGCFWHLSGT*GPLSDS
Trigger: ACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTG...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
3UTR CAA 72 bp ATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: MSRPYRALIRYG*FFTSSSCRRRS
Trigger: AGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
3UTR CAA 72 bp CCCAATGGTTGTGTCACTAAGGTGACAGTTCAGGACTaGAACAATCCCGTCCAGGTGCAGGGTCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: PNGCVTKVTVQD*NNPVQVQGHWS
Trigger: GCTCCAGTGACCCTGCACCTGGACGGGATTGTTCAAGTCCTGAACTGTCACCTTAGTGACACAACCATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTACACACTGGAGCCGGTaGGAGAGCAGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KLFSQTGIRKRLLLDSEATHWSR*ESSWKA
Trigger: TGCCTTCCAGCTGCTCTCTCACCGGCTCCAGTGTGT...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR GCA 90 bp GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGACTCGATCTCCAGCGCTaGAACCTTCCGCTTTTCGTA +
Preference number: 4 (lower is better)
Translates to: ASALGPRSSSSHRQGLERLDLQR*NLPLFV
Trigger: TACGAAAAGCGGAAGGTTGCAGCGCTGGAGATCGAG...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGATCACGTGCTTGATTTaGATGGTGTTGTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HTHHASALGPRSSSSHRQITCLI*MVLFWA
Trigger: GGCCCAGAACAACACCATGCAAATCAAGCACGTGAT...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp GGGAGTCACCTTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAAGGGTCTGGATCACGTaGTTGATTTGCATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GSHLSGTWGPLSDSLQSARVWIT*LICMVL
Trigger: CAACACCATGCAAATCAAGCACGTGATCCAGACCCT...TGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp ACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTCTGCCAACACTTCAGGGTCTGGATCACGTaGTTGATTTGCATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TWVIRLACRGGSNFCQHFRVWIT*LICMVL
Trigger: CAACACCATGCAAATCAAGCACGTGATCCAGACCCT...GAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGGGCAATAGAGCAGGCTaGCAGACCGATGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SVEVFVLACVHFHTDVHMGNRAG*QTDEAP
Trigger: GGGGGCCTCATCGGTCTGGCAGCCTGCTCTATTGCC...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCTTTTCCGAATCTCCTTaGCATTGTCACCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: EQDGVEGVHHGGRELEVLFSESP*HCHPGS
Trigger: AGATCCTGGGTGACAATGGCAAGGAGATTCGGAAAA...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAATCCACTTTTCACATTaGGGTCTGGGTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HHASALGPRSSSSHRQGLIHFSH*GLGQQP
Trigger: TGGCTGCTGACCCAGACCCCAATGTGAAAAGTGGAT...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp CTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATCGGTCCCAGGAATCAGGTCATCTGTaGTCTGGCAGTGGATCACCA +
Preference number: 4 (lower is better)
Translates to: LLDSEAVVPTQERIHRSQESGHL*SGSGSP
Trigger: TGGTGATCCACTGCCAGACCACAGATGACCTGATTC...CTGGGACCGATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTGCCATCAGGTGCACCTaGGTCATCCGTCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TSFCRGLCAGLCAFPHRCAIRCT*VIRLAC
Trigger: GCAGGCCAGACGGATGACCCAGGTGCACCTGATGGC...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTGCAGCAGCTCAGGGTTaGGCACACACTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: TSFCRGLCAGLCAFPHRCAAAQG*AHTGAG
Trigger: ACCGGCTCCAGTGTGTGCCCAACCCTGAGCTGCTGC...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp GGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGGGGAGTCACCTTTCTaGGACTTGGGGGCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: GHHSVEVFVLACVHFHTDGESPF*DLGAAF
Trigger: GAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCCC...ATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCTGTGTAGTCGATGCTaGGGGAGTCACCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RKRLLLDSEAVVPTQERILCSRC*GSHLSG
Trigger: CCCAGAAAGGTGACTCCCCCAGCATCGACTACACAG...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
3UTR CAA 72 bp ATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATAT +
Preference number: 4 (lower is better)
Translates to: MSRPYRALIRYG*FFTSSSCRRRY
Trigger: ATATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp TTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCGACAGGGCAAACTCCTaGGACAGGGTCTGGATCACG +
Preference number: 4 (lower is better)
Translates to: FSQTGIRKRLLLDSEAVVDRANS*DRVWIT
Trigger: CGTGATCCAGACCCTGTCTCAGGAGTTTGCCCTGTC...GACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGCTCGATCTCCAGCGCTaGAACCTTCCGCTTTTCGTA +
Preference number: 4 (lower is better)
Translates to: HRGTAHGRLWFNILMGFMLDLQR*NLPLFV
Trigger: TACGAAAAGCGGAAGGTTGCAGCGCTGGAGATCGAG...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGGCTGTCCCCTCCTaGTTTGGCAGGGAATCCTCA +
Preference number: 4 (lower is better)
Translates to: SSSSHRQGLERGCFWILRLAVPS*FGRESS
Trigger: TGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAG...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGGTCAGGGCCATCAGGTaGACCTGGGTCATCCGTCTG +
Preference number: 4 (lower is better)
Translates to: SVEVFVLACVHFHTDVHMVRAIR*TWVIRL
Trigger: CAGACGGATGACCCAGGTGCACCTGATGGCCCTGAC...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HTHHASALGPRSSSSHRQMSEVR*GRGCLC
Trigger: ACACAGACAGCCTCTTCCCCATCTTACTTCAGACAT...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTGGACACGGTGGTGACTaGGTTGTGGCACCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: VISLLGQGWTSFCRGLCAGHGGD*VVAPGA
Trigger: CGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCC...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR TCA 90 bp TGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGCAGACAGGGCAAACTCCTaGGACAGGGTCTGGATCACG +
Preference number: 4 (lower is better)
Translates to: CRGLCAGLCAFPHRCTYADRANS*DRVWIT
Trigger: CGTGATCCAGACCCTGTCTCAGGAGTTTGCCCTGTC...TGCATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR TCA 90 bp TGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGCACCCCAAACTTCTGGATaGGGTCATAGGCGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: CRGLCAGLCAFPHRCTYAPQTSG*GHRRGG
Trigger: ACCGCCACGCCTATGACCTCATCCAGAAGTTTGGGG...TGCATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR GCA 90 bp GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAAGGGTCTGGATCACGTaGTTGATTTGCATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ASALGPRSSSSHRQGLERRVWIT*LICMVL
Trigger: CAACACCATGCAAATCAAGCACGTGATCCAGACCCT...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCAAGAGGCTGTCTGTGTaGCGGAACATCTTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: RKRLLLDSEAVVPTQERIKRLSV*RNIFRG
Trigger: TCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTT...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTACCCGGCCCGCCAGCTaGATGAATTCCCGCATCCAG +
Preference number: 4 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCTRPAS*MNSRIQ
Trigger: CTGGATGCGGGAATTCATCCAGCTGGCGGGCCGGGT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGAGCTTCATCAAGCTCTaGTTACACACATTGGCCACC +
Preference number: 4 (lower is better)
Translates to: CSGAKVKLFSQTGIRKRLSFIKL*LHTLAT
Trigger: GGTGGCCAATGTGTGTAACCAGAGCTTGATGAAGCT...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAAGCTTCATCAAGCTCTaGTTACACACATTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ASALGPRSSSSHRQGLERSFIKL*LHTLAT
Trigger: GGTGGCCAATGTGTGTAACCAGAGCTTGATGAAGCT...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp GGCAAGGTAGGCTTTGGACAGGCTGAGGTCTTTCTCCTGTTCTGCTGTCTCCAGTCAGAACAGCAATCCTaGTCATCATCCCAATGGTTG +
Preference number: 4 (lower is better)
Translates to: GKVGFGQAEVFLLFCCLQSEQQS*SSSQWL
Trigger: CAACCATTGGGATGATGACCAGGATTGCTGTTCTGA...CTGGAGACAGCAGAACAGGAGAAAGACCTCAGCCTGTCCAAAGCCTACCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp TTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCAGTAGGAGTTCATGGTaGGAGTGGAGGGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: FSQTGIRKRLLLDSEAVVSRSSW*EWRGSL
Trigger: AAGGCTCCCCCTCCACTCCCACCATGAACTCCTACT...GACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCGGCCTTGATCAGGTATaGGTTGTTCTTCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: RKRLLLDSEAVVPTQERIGLDQV*VVLHVQ
Trigger: CTGGACGTGAAGAACAACCCATACCTGATCAAGGCC...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR TCA 90 bp AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTCATCATCCTCAGGGGTaGCCAGCTTCATCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KLFSQTGIRKRLLLDSEAHHPQG*PASSSS
Trigger: AGAGCTTGATGAAGCTGGTCACCCCTGAGGATGATG...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTAAGAGAACATTGAAGTaGGGCAGCACGGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: TSFCRGLCAGLCAFPHRCKRTLK*GSTAPR
Trigger: CCGAGGTGCCGTGCTGCCGCACTTCAATGTTCTCTT...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGATGGTGTTGAGGGTGTaGACCATGGTGGACGCGAAC +
Preference number: 4 (lower is better)
Translates to: SVEVFVLACVHFHTDVHMMVLRV*TMVDAN
Trigger: GTTCGCGTCCACCATGGTGCACACCCTCAACACCAT...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp ATGTACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGATCCACTTTTCACATTaGGGTCTGGGTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MYTAVEKPEPTCSSFFPLIHFSH*GLGQQP
Trigger: TGGCTGCTGACCCAGACCCCAATGTGAAAAGTGGAT...CAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTCAGCAGGTTAATGTCTaGCACCGACACCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: KLFSQTGIRKRLLLDSEAQQVNV*HRHQNQ
Trigger: CTGGTTCTGGTGTCGGTGCCAGACATTAACCTGCTG...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp TCCCGAAGCAGGATGTCTGCCATTGAATGGAAGATGTTCTCTGCATTCAGCAGGTTGTCACCCAGGATCTaGAAGAGCCCATCTAGGATC +
Preference number: 4 (lower is better)
Translates to: SRSRMSAIEWKMFSAFSRLSPRI*KSPSRI
Trigger: GATCCTAGATGGGCTCTTCCAGATCCTGGGTGACAA...CCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp TGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGCATGTCCCCTCCTGCTTTaGCAGGGAATCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: CRGLCAGLCAFPHRCTYACPLLL*QGILRV
Trigger: AACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGACA...TGCATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGAGCCTTCTAAGCCTTTaGTACTGGGAGGGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: GPRSSSSHRQGLERGCFWSLLSL*YWEGLV
Trigger: TACTAAACCCTCCCAGTACCAAAGGCTTAGAAGGCT...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTAGCTGGTTCCTCAGCTaGAAGAGCTCGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VISLLGQGWTSFCRGLCASWFLS*KSSVEV
Trigger: CACCTCCACCGAGCTCTTCCAGCTGAGGAACCAGCT...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
3UTR CAA 72 bp CTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCTaGAGGAAGCTTGGTTTGCTTAGCATCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LNLLAVLSSRWA*RKLGLLSIFAV
Trigger: GACAGCAAAGATGCTAAGCAAACCAAGCTTCCTCAAGGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCCTATCAGTGTTGGCTaGGGTGAAGACATTGATGCC +
Preference number: 4 (lower is better)
Translates to: SSSSHRQGLERGCFWILRPISVG*GEDIDA
Trigger: GGCATCAATGTCTTCACCTCAGCCAACACTGATAGG...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp GGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATATCATAGGCCAAGCATaGCAGGACAGCAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GHHSVEVFVLACVHFHTDIIGQA*QDSSQD
Trigger: ATCCTGACTGCTGTCCTGCCATGCTTGGCCTATGAT...ATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
3UTR CAA 72 bp CATGTAAAGATGGGGCACTCAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAATCCACTGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: HVKMGHSISCTS*STSVRKSTVTS
Trigger: GGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp GGATGGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACGGAGGAAGCAATTTCTaGCAACACTTCCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: GWTSFCRGLCAGLCAFPHGGSNF*QHFQIL
Trigger: AAGGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCC...GTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR GCA 90 bp TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGATCACGTGCTTGATTTaGATGGTGTTGTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SVEVFVLACVHFHTDVHMITCLI*MVLFWA
Trigger: GGCCCAGAACAACACCATGCAAATCAAGCACGTGAT...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp ATGTACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGTCACCAGGTCAAACTTaGTGCTTTCTGTCACAATGT +
Preference number: 4 (lower is better)
Translates to: MYTAVEKPEPTCSSFFPLSPGQT*CFLSQC
Trigger: ACATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGA...CAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGTTTTCCGAATCTCCTTaGCATTGTCACCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SSSSHRQGLERGCFWILRFSESP*HCHPGS
Trigger: AGATCCTGGGTGACAATGGCAAGGAGATTCGGAAAA...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTTTGTCACCCAGGATCTaGAAGAGCCCATCTAGGATC +
Preference number: 4 (lower is better)
Translates to: VISLLGQGWTSFCRGLCALSPRI*KSPSRI
Trigger: GATCCTAGATGGGCTCTTCCAGATCCTGGGTGACAA...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTGGATCACCAGGATGTTaGCCATCTCAGCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: TSFCRGLCAGLCAFPHRCGSPGC*PSQQTS
Trigger: TGAAGTTTGCTGAGATGGCCAACATCCTGGTGATCC...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
3UTR CAA 72 bp TATGTAAAGATGGGGCACTCAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAATCCACTGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: YVKMGHSISCTS*STSVRKSTVTS
Trigger: GGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213003.2
CDS-3UTR GCA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTAAGAGGCTGTCTGTGTaGCGGAACATCTTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCKRLSV*RNIFRG
Trigger: TCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTATCATAGGCCAAGCATaGCAGGACAGCAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCIIGQA*QDSSQD
Trigger: ATCCTGACTGCTGTCCTGCCATGCTTGGCCTATGAT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR GCA 90 bp AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTTGTCTTACTTCCAGGTaGTGTTTCTGGACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: KLFSQTGIRKRLLLDSEACLTSR*CFWTFS
Trigger: TGAAAAAGTCCAGAAACAGCACCTGGAAGTAAGACA...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CCA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VISLLGQGWTSFCRGLCAMSEVR*GRGCLC
Trigger: ACACAGACAGCCTCTTCCCCATCTTACTTCAGACAT...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR TCA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCSSDNV*SKMGKR
Trigger: CCTCTTCCCCATCTTACTTCAGACATTATCTGACGA...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CCA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCMSAIE*KMFSAF
Trigger: GAATGCAGAGAACATCTTCCATTCAATGGCAGACAT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
3UTR CAA 72 bp TCATCTGCAAGTGTGTGCATAGGGAGACTTTTTGTTTaGTTGTTCAAGATAAGGTTTCTCTGTGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSASVCIGRLFV*LFKIRFLCVAL
Trigger: CAAGGCTACACAGAGAAACCTTATCTTGAACAACAAAACAAAAAGTCTCCCTATGCACACACTTGCAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGGATCCACTTTTCACATaGGGGTCTGGGTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SQYHPPPYPGWWLGPALLDPLFT*GSGSAA
Trigger: GGCTGCTGACCCAGACCCCAATGTGAAAAGTGGATC...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGACGGTGGTGACTGGGTaGTGGCACCAGGAGCGGTAC +
Preference number: 5 (lower is better)
Translates to: HTPCQCSGAKVKLFSQTGTVVTG*WHQERY
Trigger: GTACCGCTCCTGGTGCCACAACCCAGTCACCACCGT...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CAA 90 bp CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: HTPCQCSGAKVKLFSQTGMVDAN*RSSSRS
Trigger: GCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCAT...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CAA 90 bp CTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATCGGTCCCAGTGCAGCAGCTCAGGGTaGGGCACACACTGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LLDSEAVVPTQERIHRSQCSSSG*GTHWSR
Trigger: CCGGCTCCAGTGTGTGCCCAACCCTGAGCTGCTGCA...CTGGGACCGATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CAA 90 bp CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGGCTGAGGTGAAGACATaGATGCCACTTCCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: QSQYHPPPYPGWWLGPALAEVKT*MPLPKL
Trigger: CAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGC...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGTCTGGATCACGTGCTaGATTTGCATGGTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: EPIPSPSLPWLVVGSSPAVWITC*ICMVLF
Trigger: GAACAACACCATGCAAATCAAGCACGTGATCCAGAC...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CAA 90 bp AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGATTTTCCGAATCTCCTaGCCATTGTCACCCAGGATC +
Preference number: 5 (lower is better)
Translates to: SQYHPPPYPGWWLGPALLIFRIS*PLSPRI
Trigger: GATCCTGGGTGACAATGGCAAGGAGATTCGGAAAAT...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS TCA 90 bp GCTGGGACAGGGCAAACTCCTGAGACAGGGTCTGGATCACGTGCTTaGTTTGCATGGTGTTGTTCTGGGCCACAAAGTCCCGCACCAGCT +
Preference number: 5 (lower is better)
Translates to: AGTGQTPETGSGSRA*FAWCCSGPQSPAPA
Trigger: AGCTGGTGCGGGACTTTGTGGCCCAGAACAACACCATGCAAATCAAGCACGTGATCCAGACCCTGTCTCAGGAGTTTGCCCTGTCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CAA 90 bp TCCGGGGTCTGCAGGTCCTTGAGCTGGTTCCTCAGCTGGAAGAGCTCGGTGGAGGAACTGTCGGGCGTATaGGTTGTTGGAGTAAATCCT +
Preference number: 5 (lower is better)
Translates to: SGVCRSLSWFLSWKSSVEELSGV*VVGVNP
Trigger: AGGATTTACTCCAACAACCAATACGCCCGACAGTTC...CTCCACCGAGCTCTTCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGGATCACGTGCTTGATTaGCATGGTGTTGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: HTPCQCSGAKVKLFSQTGDHVLD*HGVVLG
Trigger: GCCCAGAACAACACCATGCAAATCAAGCACGTGATC...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CAA 90 bp GGAGGGCATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTGATCACGTGCTTGATTaGCATGGTGTTGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GGHRGTAHGRLWFNILMGDHVLD*HGVVLG
Trigger: GCCCAGAACAACACCATGCAAATCAAGCACGTGATC...ACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp GAGGGGCTCTCAGGCAGTGACACACTAGGCAAGGTAGGCTTTGGACAGGCTGAGGTCTGGATCACGTGCTaGATTTGCATGGTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: EGLSGSDTLGKVGFGQAEVWITC*ICMVLF
Trigger: GAACAACACCATGCAAATCAAGCACGTGATCCAGAC...CTCAGCCTGTCCAAAGCCTACCTTGCCTAGTGTGTCACTGCCTGAGAGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp GTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCCTCCCGAAGCAGGATGTCTATTTTCCGAATCTCCTaGCCATTGTCACCCAGGATC +
Preference number: 5 (lower is better)
Translates to: VCTMVDANLRSSSRSRMSIFRIS*PLSPRI
Trigger: GATCCTGGGTGACAATGGCAAGGAGATTCGGAAAAT...AGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATGGATCACCAGGATGTaGGCCATCTCAGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: THHASALGPRSSSSHRQGWITRM*AISANF
Trigger: GAAGTTTGCTGAGATGGCCAACATCCTGGTGATCCA...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp GGGAGTCACCTTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCATGGATCACCAGGATGTaGGCCATCTCAGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: GSHLSGTWGPLSDSLQSAWITRM*AISANF
Trigger: GAAGTTTGCTGAGATGGCCAACATCCTGGTGATCCA...TGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCGTGAGCAGGATGGTGTaGAGGGTGTGCACCATGGTG +
Preference number: 5 (lower is better)
Translates to: RKRLLLDSEAVVPTQERIVSRMV*RVCTMV
Trigger: CACCATGGTGCACACCCTCAACACCATCCTGCTCAC...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CAA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCTCACCTTTCTGGGACTaGGGGGCCGCTTTCAGACAG +
Preference number: 5 (lower is better)
Translates to: RKRLLLDSEAVVPTQERISPFWD*GAAFRQ
Trigger: CTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGA...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CAA 90 bp ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTGATTTGCATGGTGTaGTTCTGGGCCACAAAGTCC +
Preference number: 5 (lower is better)
Translates to: THHASALGPRSSSSHRQGLICMV*FWATKS
Trigger: GGACTTTGTGGCCCAGAACAACACCATGCAAATCAA...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CAA 90 bp GATCCCCTCGCCCACTGCGCTGGTGTCTTACTTCCAGGTGCTGTTTCTGGACTTGTCTGGATCACGTGCTaGATTTGCATGGTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: DPLAHCAGVLLPGAVSGLVWITC*ICMVLF
Trigger: GAACAACACCATGCAAATCAAGCACGTGATCCAGAC...AAGTCCAGAAACAGCACCTGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CAA 90 bp CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGGATCCACTTTTCACATaGGGGTCTGGGTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: HRGTAHGRLWFNILMGFMDPLFT*GSGSAA
Trigger: GGCTGCTGACCCAGACCCCAATGTGAAAAGTGGATC...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGACTCACCAGGTCAAACTaGCTGCTTTCTGTCACAATG +
Preference number: 5 (lower is better)
Translates to: THHASALGPRSSSSHRQGLTRSN*LLSVTM
Trigger: CATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGAG...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGCTCTGGTTACACACATaGGCCACCTCCTTGATACTT +
Preference number: 5 (lower is better)
Translates to: HTHHASALGPRSSSSHRQLWLHT*ATSLIL
Trigger: AAGTATCAAGGAGGTGGCCAATGTGTGTAACCAGAG...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTACTCACCAGGTCAAACTaGCTGCTTTCTGTCACAATG +
Preference number: 5 (lower is better)
Translates to: HHASALGPRSSSSHRQGLLTRSN*LLSVTM
Trigger: CATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGAG...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGGAACTGTCGGGCGTATaGGTTGTTGGAGTAAATCCT +
Preference number: 5 (lower is better)
Translates to: CSGAKVKLFSQTGIRKRLELSGV*VVGVNP
Trigger: AGGATTTACTCCAACAACCAATACGCCCGACAGTTC...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: ASALGPRSSSSHRQGLERISCTS*STSVRK
Trigger: TTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAAT...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CAA 90 bp CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGACATTGGCCACCTCCTaGATACTTTTCTTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: HRGTAHGRLWFNILMGFMTLATS*ILFLRS
Trigger: TGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATGT...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp AAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATGCAGGATGTCTGCCATaGAATGGAAGATGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: KRLLLDSEAVVPTQERIHAGCLP*NGRCSL
Trigger: CAGAGAACATCTTCCATTCAATGGCAGACATCCTGC...ATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CAA 90 bp AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: RKRLLLDSEAVVPTQERILIRYG*FFTSSS
Trigger: ACTGCTGGACGTGAAGAACAACCCATACCTGATCAA...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034190.11
CDS-3UTR CAA 90 bp ATGTACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGCTCTGGTTACACACATaGGCCACCTCCTTGATACTT +
Preference number: 5 (lower is better)
Translates to: MYTAVEKPEPTCSSFFPLLWLHT*ATSLIL
Trigger: AAGTATCAAGGAGGTGGCCAATGTGTGTAACCAGAG...CAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp TTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCTTGATTTGCATGGTGTaGTTCTGGGCCACAAAGTCC +
Preference number: 5 (lower is better)
Translates to: FSQTGIRKRLLLDSEAVVLICMV*FWATKS
Trigger: GGACTTTGTGGCCCAGAACAACACCATGCAAATCAA...GACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS CCA 90 bp CCTTTGGTACCTCATCAGATTCGTCAGATAATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTTCGAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: PLVPHQIRQIMSEVR*GRGCLCAGTSFEEF
Trigger: AAACTCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTACCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTGCTGAGGTGAAGACATaGATGCCACTTCCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VISLLGQGWTSFCRGLCAAEVKT*MPLPKL
Trigger: CAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGC...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS-3UTR CAA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTTTGATTTGCATGGTGTaGTTCTGGGCCACAAAGTCC +
Preference number: 5 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCLICMV*FWATKS
Trigger: GGACTTTGTGGCCCAGAACAACACCATGCAAATCAA...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS-3UTR CAA 90 bp TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTACATTGGCCACCTCCTaGATACTTTTCTTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: SVISLLGQGWTSFCRGLCTLATS*ILFLRS
Trigger: TGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATGT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS CAA 72 bp TCAGCAGCCAACTTACTCAGTCCATCGAAGAGAACATaGAAGTGCGGCAGCACGGCACCTCGGGCCACTTTG +
Preference number: 6 (lower is better)
Translates to: SAANLLSPSKRT*KCGSTAPRATL
Trigger: CAAAGTGGCCCGAGGTGCCGTGCTGCCGCACTTCAATGTTCTCTTCGATGGACTGAGTAAGTTGGCTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS TCA 72 bp GGGCAAACTCCTGAGACAGGGTCTGGATCACGTGCTTaGTTTGCATGGTGTTGTTCTGGGCCACAAAGTCCC +
Preference number: 6 (lower is better)
Translates to: GQTPETGSGSRA*FAWCCSGPQSP
Trigger: GGGACTTTGTGGCCCAGAACAACACCATGCAAATCAAGCACGTGATCCAGACCCTGTCTCAGGAGTTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
ENSMUST00000213003.2
CDS CAA 72 bp AAGAGGCGGTCCAGGAGCTCAGATCCACTTTTCACATaGGGGTCTGGGTCAGCAGCCAACTTACTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: KRRSRSSDPLFT*GSGSAANLLSP
Trigger: TGGACTGAGTAAGTTGGCTGCTGACCCAGACCCCAATGTGAAAAGTGGATCTGAGCTCCTGGACCGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034190.11
ENSMUST00000212829.2
CDS TCA 72 bp GCCTTTGGTACCTCATCAGATTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGGCTGTCTGTGTGCCGG +
Preference number: 6 (lower is better)
Translates to: AFGTSSDSSDNV*SKMGKRLSVCR
Trigger: CCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTACCAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212829.2