Pregenerated sensors for VAC14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010936Ensembl transcript IDs: ENSMUST00000034190.11, ENSMUST00000212829.2, ENSMUST00000213003.2
Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AAGAGGTTCTGGCTTTCCCGTCTCCTCCTGGGAGCGGCTGAGGGGTaGGCTGGCTGCCTAGTGCTGGGTCAGAGGGAGTACCGGGGTCTG | + |
Preference number: 1 (lower is better) Translates to: KRFWLSRLLLGAAEG*AGCLVLGQREYRGL Trigger: CAGACCCCGGTACTCCCTCTGACCCAGCACTAGGCAGCCAGCTCACCCCTCAGCCGCTCCCAGGAGGAGACGGGAAAGCCAGAACCTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 90 bp | TCATCGTGGCTACGGCCTGCCCAAGGCCGGGTAGGGAGACCGGATTaGAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGGTAGTAGCTCT | + |
Preference number: 1 (lower is better) Translates to: SSWLRPAQGRVGRPD*REALLPLLGLGSSS Trigger: AGAGCTACTACCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGCCACGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR TCA 90 bp | GTAGGTTGGCTCTGCCGGAGGTGGGCACCTGAAGCTCCGAGTGGTTaGCTCGGAGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCT | + |
Preference number: 1 (lower is better) Translates to: VGWLCRRWAPEAPSG*LGGQGHQVHLGHPS Trigger: AGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAGCCAACCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 90 bp | TCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGCCTaGCCAAGGCCGGGTAGGGAGACCGGATTGCAGAGAGGCTCTCCT | + |
Preference number: 1 (lower is better) Translates to: SEPASGQLHLIVATA*PRPGRETGLQRGSP Trigger: AGGAGAGCCTCTCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | GAGGAGCTGAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTaGCTGGTGGTTGGGTCCAGCCCTGCTGGAGGCAGGTTCTTAGGC | + |
Preference number: 1 (lower is better) Translates to: EELRLTEPIPSPSLP*LVVGSSPAGGRFLG Trigger: GCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTCAGCTCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR TCA 90 bp | GACCTGCATCTTGGAGCCTGGTCTTGCCTCCCAGTAGGACAAGGATaGTGCTGGGAGCCTGAGCAGCCAGGCCTTGGTGCCAGGTGGCAG | + |
Preference number: 1 (lower is better) Translates to: DLHLGAWSCLPVGQG*CWEPEQPGLGARWQ Trigger: CTGCCACCTGGCACCAAGGCCTGGCTGCTCAGGCTCCCAGCATCATCCTTGTCCTACTGGGAGGCAAGACCAGGCTCCAAGATGCAGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | TGCACATTTAGCCTGGGTGTTACTCACCAGGCAGTACTCGCCCAGTaGCTCCTGGCACATGGCGGCTCCTGGGCAAGCCCCAGAGGGTCA | + |
Preference number: 1 (lower is better) Translates to: CTFSLGVTHQAVLAQ*LLAHGGSWASPRGS Trigger: TGACCCTCTGGGGCTTGCCCAGGAGCCGCCATGTGCCAGGAGCCACTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | GTTATCTGGAGTGCTGCCTGCTTTGAGGAGCAGGCGCTGCATGTGTaGAGGCGCCAAGTGCTGTGCTTGCCCAGGCAGCCGCTGCTTCTG | + |
Preference number: 1 (lower is better) Translates to: VIWSAACFEEQALHV*RRQVLCLPRQPLLL Trigger: CAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | TGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGGTTaGGCACACACTGGAGCCGGTGAGAGAGCAGCTGGAAGGCACTGC | + |
Preference number: 1 (lower is better) Translates to: WGPLSDSLQSAAAQG*AHTGAGERAAGRHC Trigger: GCAGTGCCTTCCAGCTGCTCTCTCACCGGCTCCAGTGTGTGCCCAACCCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR TCA 90 bp | TCCCGACTCAGGAGAGAATCCATCGGTCCCAGGACAGAGTGTAGCTaGCAGTGCTGGGGTCCAGGTGCTCTGCTGGGAGGAGCTGAGGCT | + |
Preference number: 1 (lower is better) Translates to: SRLRRESIGPRTECS*QCWGPGALLGGAEA Trigger: AGCCTCAGCTCCTCCCAGCAGAGCACCTGGACCCCAGCACTGTCAGCTACACTCTGTCCTGGGACCGATGGATTCTCTCCTGAGTCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR TCA 90 bp | GTACTGGGAGGGTTTAGTAGGTTGGCTCTGCCGGAGGTGGGCACCTaGAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTGCA | + |
Preference number: 1 (lower is better) Translates to: VLGGFSRLALPEVGT*SSEWLTRRSGPSGA Trigger: TGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAGCCAACCTACTAAACCCTCCCAGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 90 bp | TGTGGAGGCGCCAAGTGCTGTGCTTGCCCAGGCAGCCGCTGCTTCTaGACATTTAGCCTGGGTGTTACTCACCAGGCAGTACTCGCCCAG | + |
Preference number: 1 (lower is better) Translates to: CGGAKCCACPGSRCF*TFSLGVTHQAVLAQ Trigger: CTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR GCA 90 bp | CACCTGAAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTaGACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTC | + |
Preference number: 1 (lower is better) Translates to: HLKLRVVDSEVRAIR*TWVIRLACRGGSNF Trigger: GAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CCA 90 bp | GTGGCGGTAGTTCTGGGTGAGGAAGCAGAGGGACACGGTGGTGACTaGGTTGTGGCACCAGGAGCGGTACAGGCAGCAGAAGAGGTTCTG | + |
Preference number: 1 (lower is better) Translates to: VAVVLGEEAEGHGGD*VVAPGAVQAAEEVL Trigger: CAGAACCTCTTCTGCTGCCTGTACCGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCCCTCTGCTTCCTCACCCAGAACTACCGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR CCA 90 bp | AGTGCTGTGCTTGCCCAGGCAGCCGCTGCTTCTGCACATTTAGCCTaGGTGTTACTCACCAGGCAGTACTCGCCCAGTGGCTCCTGGCAC | + |
Preference number: 1 (lower is better) Translates to: SAVLAQAAAASAHLA*VLLTRQYSPSGSWH Trigger: GTGCCAGGAGCCACTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTaGCTACGGCCTGCCCAAGGCCGGGTAGGGAGACCGGATTGCAGA | + |
Preference number: 1 (lower is better) Translates to: NPRSLNLLLASCTSS*LRPAQGRVGRPDCR Trigger: TCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | AACACACTAGCCCAGATCCCTTCCTCAGCCGAGCTGCGAAAGCACTaGAAGCACCTGGACCAAGCACTGCTAGGCGGAGACACAGCTGCC | + |
Preference number: 1 (lower is better) Translates to: NTLAQIPSSAELRKH*KHLDQALLGGDTAA Trigger: GGCAGCTGTGTCTCCGCCTAGCAGTGCTTGGTCCAGGTGCTTCCAGTGCTTTCGCAGCTCGGCTGAGGAAGGGATCTGGGCTAGTGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | AAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTGCACCTaGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTCTGCCAA | + |
Preference number: 1 (lower is better) Translates to: KLRVVDSEVRAIRCT*VIRLACRGGSNFCQ Trigger: TTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 90 bp | TGCATGTGTGGAGGCGCCAAGTGCTGTGCTTGCCCAGGCAGCCGCTaGTTCTGCACATTTAGCCTGGGTGTTACTCACCAGGCAGTACTC | + |
Preference number: 1 (lower is better) Translates to: CMCGGAKCCACPGSR*FCTFSLGVTHQAVL Trigger: GAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCCACACATGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | GCAGCAGGCTGGGGAGGGCATCGAGGGACAGCCCATGGCAGGCTCTaGTTTAACATTCTGATGGGTTTCATGTCAGCACTGGCCTGTGTG | + |
Preference number: 1 (lower is better) Translates to: AAGWGGHRGTAHGRL*FNILMGFMSALACV Trigger: CACACAGGCCAGTGCTGACATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATGCCCTCCCCAGCCTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | GCTGCCAAGGAGCAAAGGCCCAGGTGGCCATCTAGGCTAGGAAGGTaGCTAGAGCCAGGGCTGCCTCTGGCTTCTCCACTACACTGTAAA | + |
Preference number: 1 (lower is better) Translates to: AAKEQRPRWPSRLGR*LEPGLPLASPLHCK Trigger: TTTACAGTGTAGTGGAGAAGCCAGAGGCAGCCCTGGCTCTAGCCACCTTCCTAGCCTAGATGGCCACCTGGGCCTTTGCTCCTTGGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 90 bp | GCAGCTCTGTGTAGTCGATGCTGGGGGAGTCACCTTTCTGGGACTTaGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGGT | + |
Preference number: 1 (lower is better) Translates to: AALCSRCWGSHLSGT*GPLSDSLQSAAAQG Trigger: ACCCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCCCCAGCATCGACTACACAGAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR CCA 90 bp | TTGACTCGGAGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTaGCCTGCAGGGGAGGAAGCAATTTCTGCCAACACTTCCAGATCC | + |
Preference number: 1 (lower is better) Translates to: LTRRSGPSGAPGSSV*PAGEEAISANTSRS Trigger: GGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 90 bp | TCGGAGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTGGCCTaGAGGGGAGGAAGCAATTTCTGCCAACACTTCCAGATCCTTCAA | + |
Preference number: 1 (lower is better) Translates to: SEVRAIRCTWVIRLA*RGGSNFCQHFQILQ Trigger: TTGAAGGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CCA 90 bp | CTCCACTGGCTGTCCCCTCCTGCTTTGGCAGGGAATCCTCAGGGTTaGGTTCGGTCTGCTTCTGTGCTACTGACTTTGGCTCATCGGGTT | + |
Preference number: 1 (lower is better) Translates to: LHWLSPPALAGNPQG*VRSASVLLTLAHRV Trigger: AACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR TCA 90 bp | GGACGCGAACTTGAGGTCCTCCTCCCGAAGCAGGATGTCTGCCATTaGATGGAAGATGTTCTCTGCATTCAGCAGGAGGCAGAGCTGCCT | + |
Preference number: 1 (lower is better) Translates to: GRELEVLLPKQDVCH*MEDVLCIQQEAELP Trigger: AGGCAGCTCTGCCTCCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR TCA 90 bp | TGGCAGGGAATCCTCAGGGTTGGGTTCGGTCTGCTTCTGTGCTACTaGCTTTGGCTCATCGGGTTCATCATCCTCAGGGGTGACCAGCTT | + |
Preference number: 1 (lower is better) Translates to: WQGILRVGFGLLLCY*LWLIGFIILRGDQL Trigger: AAGCTGGTCACCCCTGAGGATGATGAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 90 bp | TCTCCACTACACTGTAAACACACGTGTGTTATCTGGAGTGCTGCCTaGTTTGAGGAGCAGGCGCTGCATGTGTGGAGGCGCCAAGTGCTG | + |
Preference number: 1 (lower is better) Translates to: SPLHCKHTCVIWSAA*FEEQALHVWRRQVL Trigger: CAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAACACACGTGTGTTTACAGTGTAGTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR GCA 90 bp | GTCCCCTCCTGCTTTGGCAGGGAATCCTCAGGGTTGGGTTCGGTCTaGTTCTGTGCTACTGACTTTGGCTCATCGGGTTCATCATCCTCA | + |
Preference number: 1 (lower is better) Translates to: VPSCFGRESSGLGSV*FCATDFGSSGSSSS Trigger: TGAGGATGATGAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CCA 90 bp | GCGAACTTGAGGTCCTCCTCCCGAAGCAGGATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTCAGCAGGAGGCAGAGCTGCCTGATG | + |
Preference number: 1 (lower is better) Translates to: ANLRSSSRSRMSAIE*KMFSAFSRRQSCLM Trigger: CATCAGGCAGCTCTGCCTCCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR GCA 90 bp | TGCACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTCTaGCAACACTTCCAGATCCTTCAAGACAACCTCATCAGATTCGTC | + |
Preference number: 1 (lower is better) Translates to: CTWVIRLACRGGSNF*QHFQILQDNLIRFV Trigger: GACGAATCTGATGAGGTTGTCTTGAAGGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CCA 90 bp | GCTAGAGAGAAAGAGTGGATTAGGGCTTTGCTAACGGAGGGTGGATaGGAAAATGCCTTTGTGTGTAGTGAGGCGCACACCAAAGCTCAG | + |
Preference number: 1 (lower is better) Translates to: AREKEWIRALLTEGG*ENAFVCSEAHTKAQ Trigger: CTGAGCTTTGGTGTGCGCCTCACTACACACAAAGGCATTTTCCCATCCACCCTCCGTTAGCAAAGCCCTAATCCACTCTTTCTCTCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR TCA 90 bp | CTGGCCCTTTATCACCAATTGCCACCTTCTCTGATACTGCATTCTTaGCATTCTAGAAGACTTCTGGGTGCATCGCCCTCTTCCCCTCTC | + |
Preference number: 1 (lower is better) Translates to: LALYHQLPPSLILHS*HSRRLLGASPSSPL Trigger: GAGAGGGGAAGAGGGCGATGCACCCAGAAGTCTTCTAGAATGTCAAGAATGCAGTATCAGAGAAGGTGGCAATTGGTGATAAAGGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR GCA 90 bp | GGCCCTGACAGGATCTTACATGTAAAGATGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCC | + |
Preference number: 1 (lower is better) Translates to: GPDRILHVKMGHSIS*TSLSTSVRKSTVTS Trigger: GGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATGTAAGATCCTGTCAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR GCA 90 bp | AGCAGTTGCAGGCGTAGATATGTAAAGATGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCC | + |
Preference number: 1 (lower is better) Translates to: SSCRRRYVKMGHSIS*TSLSTSVRKSTVTS Trigger: GGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATATCTACGCCTGCAACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 90 bp | AAACTTTTTACCATGTACACAGCTGTGGAGAAGCCTGAACCTACTTaGAGTTCTTTCTTCCCGCTGGGCCTTGAGGAAGCTTGGTTTGCT | + |
Preference number: 1 (lower is better) Translates to: KLFTMYTAVEKPEPT*SSFFPLGLEEAWFA Trigger: AGCAAACCAAGCTTCCTCAAGGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACATGGTAAAAAGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR TCA 90 bp | TCCAGATCCTTCAAGACAACCTCATCAGATTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTT | + |
Preference number: 1 (lower is better) Translates to: SRSFKTTSSDSSDNV*SKMGKRLSVCRNIF Trigger: AAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTTGTCTTGAAGGATCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CCA 90 bp | TCAAGACAACCTCATCAGATTCGTCAGATAATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTTCGAGGAGTTT | + |
Preference number: 1 (lower is better) Translates to: SRQPHQIRQIMSEVR*GRGCLCAGTSFEEF Trigger: AAACTCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTTGTCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | GGCTCTGCCGGAGGTGGGCACCTGAAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTGCACCTaGGTCATCCGTCTGGCCTGC | + |
Preference number: 2 (lower is better) Translates to: GSAGGGHLKLRVVDSEVRAIRCT*VIRLAC Trigger: GCAGGCCAGACGGATGACCCAGGTGCACCTGATGGC...CCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR TCA 90 bp | GGGAGACCGGATTGCAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGGTAGTAGCGCTGTCTCCAGGGCCTaGGCCATGGCAGCACCAGTA | + |
Preference number: 2 (lower is better) Translates to: GRPDCREALLPLLGLGSSAVSRA*AMAAPV Trigger: TACTGGTGCTGCCATGGCTCAGGCCCTGGAGACAGC...GCTACTACCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR GCA 90 bp | GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTCTGGCTGTCCCCTCCTaGTTTGGCAGGGAATCCTCA | + |
Preference number: 2 (lower is better) Translates to: EPIPSPSLPWLVVGSSPALAVPS*FGRESS Trigger: TGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAG...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | TGCTTTGAGGAGCAGGCGCTGCATGTGTGGAGGCGCCAAGTGCTGTGCTTGCCCGTGGTGACTGGGTTGTaGCACCAGGAGCGGTACAGG | + |
Preference number: 2 (lower is better) Translates to: CFEEQALHVWRRQVLCLPVVTGL*HQERYR Trigger: CCTGTACCGCTCCTGGTGCCACAACCCAGTCACCAC...GGGCAAGCACAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGGCACATGGCGGCTCCTaGGCAAGCCCCAGAGGGTCA | + |
Preference number: 2 (lower is better) Translates to: HTPCQCSGAKVKLFSQTGAHGGS*ASPRGS Trigger: TGACCCTCTGGGGCTTGCCCAGGAGCCGCCATGTGC...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR TCA 90 bp | TGCACGAGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCACCTCCTGGGAGCGGCTaGGGGGTGAGCTGGCTGCCT | + |
Preference number: 2 (lower is better) Translates to: CTSLSTSVRKSTVTSRSPPPGSG*GVSWLP Trigger: AGGCAGCCAGCTCACCCCTCAGCCGCTCCCAGGAGG...TGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR GCA 90 bp | GAGCTGCCTGATGATGAACGGGCCTCTGGCCTCCAGGAGCTTCCGTTCACTGCTGGTTGGGTCCAGCCCTaGTGGAGGCAGGTTCTTAGG | + |
Preference number: 2 (lower is better) Translates to: ELPDDERASGLQELPFTAGWVQP*WRQVLR Trigger: CCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACC...AGCAGTGAACGGAAGCTCCTGGAGGCCAGAGGCCCGTTCATCATCAGGCAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | CAGGCCTTGGTGCCAGGTGGCAGAGAACTCGGTGGCTTCTTAGTGCCCCCTCTTGTCCAGGTGCTCTGCTaGGAGGAGCTGAGGCTGACA | + |
Preference number: 2 (lower is better) Translates to: QALVPGGRELGGFLVPPLVQVLC*EELRLT Trigger: TGTCAGCCTCAGCTCCTCCCAGCAGAGCACCTGGAC...AAGAGGGGGCACTAAGAAGCCACCGAGTTCTCTGCCACCTGGCACCAAGGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR GCA 90 bp | GAGCTGCCTGATGATGAACGGGCCTCTGGCCTCCAGGAGCTTCCGTTCACTGCTCACACACCATGCCAGTaGTCTGGGGCCAAGGTCAAG | + |
Preference number: 2 (lower is better) Translates to: ELPDDERASGLQELPFTAHTPCQ*SGAKVK Trigger: CTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG...AGCAGTGAACGGAAGCTCCTGGAGGCCAGAGGCCCGTTCATCATCAGGCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR GCA 90 bp | CCTGGGCCTGCTCTAGAACACACTAGCCCAGATCCCTTCCTCAGCCGAGCTGCGATGGTGTTGAGGGTGTaGACCATGGTGGACGCGAAC | + |
Preference number: 2 (lower is better) Translates to: PGPALEHTSPDPFLSRAAMVLRV*TMVDAN Trigger: GTTCGCGTCCACCATGGTGCACACCCTCAACACCAT...CGCAGCTCGGCTGAGGAAGGGATCTGGGCTAGTGTGTTCTAGAGCAGGCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGTGGGTCCAGCCCTGCTaGAGGCAGGTTCTTAGGCTC | + |
Preference number: 2 (lower is better) Translates to: HTPCQCSGAKVKLFSQTGWVQPC*RQVLRL Trigger: GAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCA...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | ACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCTCCCCCTCCCTACCCTaGCTGGTGGTTGGGTCCAGC | + |
Preference number: 2 (lower is better) Translates to: TQLWRSLNLLAVLSSRWASPSLP*LVVGSS Trigger: GCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGA...GGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CAA 90 bp | CCTCCACTGGCTGTCCCCTCCTGCTTTGGCAGGGAATCCTCAGGGTaGGGTTCGGTCTGCTTCTGTGCTACTGACTTTGGCTCATCGGGT | + |
Preference number: 2 (lower is better) Translates to: PPLAVPSCFGRESSG*GSVCFCATDFGSSG Trigger: ACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAGTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR TCA 90 bp | GATCCCCTCGCCCACTGCGCTGGTGTCTTACTTCCAGGTGCTGTTTCTGGACTTTGGTGGACGCGAACTTaGGGTCCTCCTCCCGAAGCA | + |
Preference number: 2 (lower is better) Translates to: DPLAHCAGVLLPGAVSGLWWTRT*GPPPEA Trigger: TGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCA...AAGTCCAGAAACAGCACCTGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR TCA 90 bp | GGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGGCAGAAGTAGAGGGACACGGTGGTaGCTGGGTTGTGGCACCAGG | + |
Preference number: 2 (lower is better) Translates to: GCSSRPAVAGVDLQQGRSRGTRW*LGCGTR Trigger: CCTGGTGCCACAACCCAGTCACCACCGTGTCCCTCT...ACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR GCA 90 bp | CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGTTGGGTCCAGCCCTaGTGGAGGCAGGTTCTTAGG | + |
Preference number: 2 (lower is better) Translates to: HTHHASALGPRSSSSHRQGWVQP*WRQVLR Trigger: CCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACC...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGTTCTTAGGCTCCTTGTaGCCTCAGCTTAGAGACCCT | + |
Preference number: 2 (lower is better) Translates to: QSQYHPPPYPGWWLGPALFLGSL*PQLRDP Trigger: AGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAA...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | AGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAATTCTTAGGCTCCTTGTaGCCTCAGCTTAGAGACCCT | + |
Preference number: 2 (lower is better) Translates to: RSGPSGAPGSSVWPAGEEFLGSL*PQLRDP Trigger: AGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAA...TTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | CCTGAGGGGCTCTCAGGCAGTGACACACTAGGCAAGGTAGGCTTTGGACAGGCTCAGCAGAAGAGGTTCTaGCTTTCCGGGGTCTGCAGG | + |
Preference number: 2 (lower is better) Translates to: PEGLSGSDTLGKVGFGQAQQKRF*LSGVCR Trigger: CCTGCAGACCCCGGAAAGCCAGAACCTCTTCTGCTG...AGCCTGTCCAAAGCCTACCTTGCCTAGTGTGTCACTGCCTGAGAGCCCCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CAA 90 bp | CCTGATGTATATAGCTGGGTGCTCAGAAGCCCAGGGCCGGTGAGATaGGATGCTGGCTCCAGGTGGGCTCTGAAGACTTGCACTGGAGGA | + |
Preference number: 2 (lower is better) Translates to: PDVYSWVLRSPGPVR*DAGSRWALKTCTGG Trigger: TCCTCCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCTCACCGGCCCTGGGCTTCTGAGCACCCAGCTATATACATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CAA 90 bp | GGCAACAGCATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGG | + |
Preference number: 2 (lower is better) Translates to: GNSMSRPYRALIRYG*FFTSSSCRRRSAAG Trigger: CCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCATGCTGTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR GCA 90 bp | GGTGAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCGTCATCCGTCTGGCCTaGAGGGGAGGAAGCAATTTC | + |
Preference number: 2 (lower is better) Translates to: GEQDGVEGVHHGGRELEVVIRLA*RGGSNF Trigger: GAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGAC...GACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | GGGAGTCACCTTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAAACCTGGACCTCCACTaGCTGTCCCCTCCTGCTTTG | + |
Preference number: 2 (lower is better) Translates to: GSHLSGTWGPLSDSLQSANLDLH*LSPPAL Trigger: CAAAGCAGGAGGGGACAGCCAGTGGAGGTCCAGGTT...TGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CAA 90 bp | GTGAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGCAGGATGTCTGCCATTGAATGGAAG | + |
Preference number: 2 (lower is better) Translates to: VSRMVLRVCTMVDAN*RSSSRSRMSAIEWK Trigger: CTTCCATTCAATGGCAGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR TCA 90 bp | AGGGCCTTGATCAGGTATGGGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGAGGGTCTGCAGGTCCTTaGGCTGGTTCCTCAGCTGGA | + |
Preference number: 2 (lower is better) Translates to: RALIRYGLFFTSSSCRRRGSAGP*AGSSAG Trigger: TCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCC...TCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR GCA 90 bp | TTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGTCAGGTCAGAGATGCTaGCAAGGAGCAAAGGCCCAG | + |
Preference number: 2 (lower is better) Translates to: FLGLGGRFQTVFSLQQLRSGQRC*QGAKAQ Trigger: CTGGGCCTTTGCTCCTTGGCAGCATCTCTGACCTGA...CCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | CGCCAGCTGGATGAATTCCCGCATCCAGCACATAGCCGTCAGCTGAATCAGGTCACCATGCCAGTGCTCTaGGGCCAAGGTCAAGCTCTT | + |
Preference number: 2 (lower is better) Translates to: RQLDEFPHPAHSRQLNQVTMPVL*GQGQAL Trigger: AAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGT...GACCTGATTCAGCTGACGGCTATGTGCTGGATGCGGGAATTCATCCAGCTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGAAGTAGGAGTTCATGGTaGGAGTGGAGGGGGAGCCTT | + |
Preference number: 2 (lower is better) Translates to: THHASALGPRSSSSHRQGSRSSW*EWRGSL Trigger: AAGGCTCCCCCTCCACTCCCACCATGAACTCCTACT...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGCTGTCCCACTGCAGCTaGCCCTTTATCACCAATTGC | + |
Preference number: 2 (lower is better) Translates to: HTPCQCSGAKVKLFSQTGLSHCS*PFITNC Trigger: GCAATTGGTGATAAAGGGCCAGCTGCAGTGGGACAG...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | GAGCTGCCTGATGATGAACGGGCCTCTGGCCTCCAGGAGCTTCCGTTCACTGCTCACACGTGTGTTATCTaGAGTGCTGCCTGCTTTGAG | + |
Preference number: 2 (lower is better) Translates to: ELPDDERASGLQELPFTAHTCVI*SAACFE Trigger: CTCAAAGCAGGCAGCACTCCAGATAACACACGTGTG...AGCAGTGAACGGAAGCTCCTGGAGGCCAGAGGCCCGTTCATCATCAGGCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGCCTGATGTATATAGCTaGGTGCTCAGAAGCCCAGGG | + |
Preference number: 2 (lower is better) Translates to: HTPCQCSGAKVKLFSQTGPDVYS*VLRSPG Trigger: CCCTGGGCTTCTGAGCACCCAGCTATATACATCAGG...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR TCA 90 bp | GGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGGCAGAAGTGCTGCTTCTGGATTCTaGGGCTGTAGTCCCGACTCA | + |
Preference number: 2 (lower is better) Translates to: GCSSRPAVAGVDLQQGRSAASGF*GCSPDS Trigger: TGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGC...ACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR TCA 90 bp | CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGCTGCTTCTGGATTCTaGGGCTGTAGTCCCGACTCA | + |
Preference number: 2 (lower is better) Translates to: HHASALGPRSSSSHRQGLAASGF*GCSPDS Trigger: TGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGC...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR TCA 90 bp | GAGCCCCTGCATTTGTTTTTGGGTCCCAAGGTAAAGGCTCATCACTCAGGTCAGTGGTGGACGCGAACTTaGGGTCCTCCTCCCGAAGCA | + |
Preference number: 2 (lower is better) Translates to: EPLHLFLGPKVKAHHSGQWWTRT*GPPPEA Trigger: TGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCA...CTGACCTGAGTGATGAGCCTTTACCTTGGGACCCAAAAACAAATGCAGGGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR GCA 90 bp | TGCACGAGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCACACACACCATGCCAGTaGTCTGGGGCCAAGGTCAAG | + |
Preference number: 2 (lower is better) Translates to: CTSLSTSVRKSTVTSRSPHTPCQ*SGAKVK Trigger: CTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG...TGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR GCA 90 bp | GGTGAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCT | + |
Preference number: 2 (lower is better) Translates to: GEQDGVEGVHHGGRELEVGHSIS*TSLSTS Trigger: AGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCC...GACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTTCCCCCTCCCTACCCTaGCTGGTGGTTGGGTCCAGC | + |
Preference number: 2 (lower is better) Translates to: KLFSQTGIRKRLLLDSEASPSLP*LVVGSS Trigger: GCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGA...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | AAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATGTCCAGGTGCTCTGCTaGGAGGAGCTGAGGCTGACA | + |
Preference number: 2 (lower is better) Translates to: KRLLLDSEAVVPTQERIHVQVLC*EELRLT Trigger: TGTCAGCCTCAGCTCCTCCCAGCAGAGCACCTGGAC...ATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | GGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGGCAGAAGTACCATGCCAGTGCTCTaGGGCCAAGGTCAAGCTCTT | + |
Preference number: 2 (lower is better) Translates to: GCSSRPAVAGVDLQQGRSTMPVL*GQGQAL Trigger: AAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGT...ACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGAGCCAGGGCTGCCTCTaGCTTCTCCACTACACTGTA | + |
Preference number: 2 (lower is better) Translates to: NPRSLNLLLASCTSSWLRSQGCL*LLHYTV Trigger: TACAGTGTAGTGGAGAAGCCAGAGGCAGCCCTGGCT...CCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | CCCGAAGCAGGATGTCTGCCATTGAATGGAAGATGTTCTCTGCATTCAGCAGGAACCCGGCCCGCCAGCTaGATGAATTCCCGCATCCAG | + |
Preference number: 2 (lower is better) Translates to: PEAGCLPLNGRCSLHSAGTRPAS*MNSRIQ Trigger: CTGGATGCGGGAATTCATCCAGCTGGCGGGCCGGGT...TCCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CAA 90 bp | TGCAGGGTCACTGGAGCCCTATCAGTGTTGGCTGAGGTGAAGACATaGATGCCACTTCCAAAGCTGGAGTCACAGGAACCTGGACCTCCA | + |
Preference number: 2 (lower is better) Translates to: CRVTGALSVLAEVKT*MPLPKLESQEPGPP Trigger: TGGAGGTCCAGGTTCCTGTGACTCCAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR TCA 90 bp | GCCTCCAGGAGCTTCCGTTCACTGCTGAACGTCTGTAGAAGGTTGATCATGAACAGGACAGAGTGTAGCTaGCAGTGCTGGGGTCCAGGT | + |
Preference number: 2 (lower is better) Translates to: ASRSFRSLLNVCRRLIMNRTECS*QCWGPG Trigger: ACCTGGACCCCAGCACTGTCAGCTACACTCTGTCCT...GTTCATGATCAACCTTCTACAGACGTTCAGCAGTGAACGGAAGCTCCTGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR TCA 90 bp | TCTGAAGTAAGATGGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTTCGAGGAGAGGACAGAGTGTAGCTaGCAGTGCTGGGGTCCAGGT | + |
Preference number: 2 (lower is better) Translates to: SEVRWGRGCLCAGTSFEERTECS*QCWGPG Trigger: ACCTGGACCCCAGCACTGTCAGCTACACTCTGTCCT...CTCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR TCA 90 bp | AGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCAAACTTCGAAGCTCCGAGTGGTTaGCTCGGAGGTCAGGGCCAT | + |
Preference number: 2 (lower is better) Translates to: SLSTSVRKSTVTSRSPNFEAPSG*LGGQGH Trigger: ATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTC...GAAGTTTGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR GCA 90 bp | GGTAGAGCCACTTCAGAACAGCAATCCTGGTCATCATCCCAATGGTTGTGTCACGGTTGGGTCCAGCCCTaGTGGAGGCAGGTTCTTAGG | + |
Preference number: 2 (lower is better) Translates to: GRATSEQQSWSSSQWLCHGWVQP*WRQVLR Trigger: CCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACC...GTGACACAACCATTGGGATGATGACCAGGATTGCTGTTCTGAAGTGGCTCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTC | + |
Preference number: 2 (lower is better) Translates to: EPIPSPSLPWLVVGSSPAMSAIE*KMFSAF Trigger: GAATGCAGAGAACATCTTCCATTCAATGGCAGACAT...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR TCA 90 bp | CAGCATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTTGTTCTTCACGTCCCTATCAGTGTTGGCTaGGGTGAAGACATTGATGCC | + |
Preference number: 2 (lower is better) Translates to: QHEQAVQGLDQVWVVLHVPISVG*GEDIDA Trigger: GGCATCAATGTCTTCACCTCAGCCAACACTGATAGG...GACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR GCA 90 bp | TTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGTTGTGCTGGCCTGTGTaGATTTCCACACAGATGTAC | + |
Preference number: 2 (lower is better) Translates to: FLGLGGRFQTVFSLQQLRLCWPV*ISTQMY Trigger: GTACATCTGTGTGGAAATGCACACAGGCCAGCACAA...CCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGTGGGTCCAGCCCTGCTaGAGGCAGGTTCTTAGGCTC | + |
Preference number: 2 (lower is better) Translates to: SSSSHRQGLERGCFWILRWVQPC*RQVLRL Trigger: GAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCA...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTTCCCCCTCCCTACCCTaGCTGGTGGTTGGGTCCAGC | + |
Preference number: 2 (lower is better) Translates to: VISLLGQGWTSFCRGLCASPSLP*LVVGSS Trigger: GCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGA...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | AGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCAAACTTCAGCTGGTTCCTCAGCTaGAAGAGCTCGGTGGAGGTG | + |
Preference number: 2 (lower is better) Translates to: SLSTSVRKSTVTSRSPNFSWFLS*KSSVEV Trigger: CACCTCCACCGAGCTCTTCCAGCTGAGGAACCAGCT...GAAGTTTGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | ACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCGCCCATGGCAGGCTCTaGTTTAACATTCTGATGGGT | + |
Preference number: 2 (lower is better) Translates to: TQLWRSLNLLAVLSSRWAAHGRL*FNILMG Trigger: ACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGC...GGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCTCAGAACAGCAATCCTaGTCATCATCCCAATGGTTG | + |
Preference number: 2 (lower is better) Translates to: EQDGVEGVHHGGRELEVLSEQQS*SSSQWL Trigger: CAACCATTGGGATGATGACCAGGATTGCTGTTCTGA...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CAA 90 bp | GGTCATCATCCCAATGGTTGTGTCACTAAGGTGACAGTTCAGGACTaGAACAATCCCGTCCAGGTGCAGGGTCACTGGAGCCCTATCAGT | + |
Preference number: 2 (lower is better) Translates to: GHHPNGCVTKVTVQD*NNPVQVQGHWSPIS Trigger: ACTGATAGGGCTCCAGTGACCCTGCACCTGGACGGGATTGTTCAAGTCCTGAACTGTCACCTTAGTGACACAACCATTGGGATGATGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR CAA 90 bp | GGCAACAGCATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATATGTAAAGATG | + |
Preference number: 2 (lower is better) Translates to: GNSMSRPYRALIRYG*FFTSSSCRRRYVKM Trigger: CATCTTTACATATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCATGCTGTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR GCA 90 bp | GAGGGGCTCTCAGGCAGTGACACACTAGGCAAGGTAGGCTTTGGACAGGCTGAGAAATTCTTGAGCCCCTaGATTTGTTTTTGGGTCCCA | + |
Preference number: 2 (lower is better) Translates to: EGLSGSDTLGKVGFGQAEKFLSP*ICFWVP Trigger: TGGGACCCAAAAACAAATGCAGGGGCTCAAGAATTT...CTCAGCCTGTCCAAAGCCTACCTTGCCTAGTGTGTCACTGCCTGAGAGCCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | AGTTTGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCAAACTTCAGTAGGAGTTCATGGTaGGAGTGGAGGGGGAGCCTT | + |
Preference number: 2 (lower is better) Translates to: SLSTSVRKSTVTSRSPNFSRSSW*EWRGSL Trigger: AAGGCTCCCCCTCCACTCCCACCATGAACTCCTACT...GAAGTTTGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | GGTCATCATCCCAATGGTTGTGTCACTAAGGTGACAGTTCAGGACTTGAACAATGGACACGGTGGTGACTaGGTTGTGGCACCAGGAGCG | + |
Preference number: 2 (lower is better) Translates to: GHHPNGCVTKVTVQDLNNGHGGD*VVAPGA Trigger: CGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCC...ATTGTTCAAGTCCTGAACTGTCACCTTAGTGACACAACCATTGGGATGATGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR CCA 90 bp | AGGGTTGGGCACACACTGGAGCCGGTGAGAGAGCAGCTGGAAGGCACTGCTCTGCCACATCTTAAACCTTaGCAGACATTATTTGTAGAC | + |
Preference number: 2 (lower is better) Translates to: RVGHTLEPVREQLEGTALPHLKP*QTLFVD Trigger: GTCTACAAATAATGTCTGCCAAGGTTTAAGATGTGG...CAGAGCAGTGCCTTCCAGCTGCTCTCTCACCGGCTCCAGTGTGTGCCCAACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | AGGTGCAGGGTCACTGGAGCCCTATCAGTGTTGGCTGAGGTGAAGACATTGATGGAATCAGGTCATCTGTaGTCTGGCAGTGGATCACCA | + |
Preference number: 2 (lower is better) Translates to: RCRVTGALSVLAEVKTLMESGHL*SGSGSP Trigger: TGGTGATCCACTGCCAGACCACAGATGACCTGATTC...CATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR CAA 90 bp | CTACTTGCAGTTCTTTCTTCCCGCTGGGCCTTGAGGAAGCTTGGTTaGCTTAGCATCTTTGCTGTCGTCGGTGCCTCCTCCATCTTATTC | + |
Preference number: 2 (lower is better) Translates to: LLAVLSSRWALRKLG*LSIFAVVGASSILF Trigger: GAATAAGATGGAGGAGGCACCGACGACAGCAAAGATGCTAAGCAAACCAAGCTTCCTCAAGGCCCAGCGGGAAGAAAGAACTGCAAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR TCA 90 bp | GTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCCTCCCGAAGCAGGATGTCTAATTGCCACCTTCTCTaGTACTGCATTCTTGACATT | + |
Preference number: 2 (lower is better) Translates to: VCTMVDANLRSSSRSRMSNCHLL*YCILDI Trigger: AATGTCAAGAATGCAGTATCAGAGAAGGTGGCAATT...AGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR-3UTR CCA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCTTCTTAGGCTCCTTGTaGCCTCAGCTTAGAGACCCT | + |
Preference number: 2 (lower is better) Translates to: RKRLLLDSEAVVPTQERIFLGSL*PQLRDP Trigger: AGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAA...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR CCA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGGACACGGTGGTGACTaGGTTGTGGCACCAGGAGCG | + |
Preference number: 2 (lower is better) Translates to: SVISLLGQGWTSFCRGLCGHGGD*VVAPGA Trigger: CGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCC...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR CAA 90 bp | AGGCGTAGATATGTAAAGATGGGGCACTCAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCA | + |
Preference number: 2 (lower is better) Translates to: RRRYVKMGHSISCTS*STSVRKSTVTSRSP Trigger: TGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATATCTACGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR TCA 90 bp | GCCTCCAGGAGCTTCCGTTCACTGCTGAACGTCTGTAGAAGGTTGATCATGAACCAGGATGTCTGCCATTaGATGGAAGATGTTCTCTGC | + |
Preference number: 2 (lower is better) Translates to: ASRSFRSLLNVCRRLIMNQDVCH*MEDVLC Trigger: GCAGAGAACATCTTCCATTCAATGGCAGACATCCTG...GTTCATGATCAACCTTCTACAGACGTTCAGCAGTGAACGGAAGCTCCTGGAGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR-3UTR GCA 90 bp | AATCCTGGTCATCATCCCAATGGTTGTGTCACTAAGGTGACAGTTCAGGACTTGATGGTGTTGAGGGTGTaGACCATGGTGGACGCGAAC | + |
Preference number: 2 (lower is better) Translates to: NPGHHPNGCVTKVTVQDLMVLRV*TMVDAN Trigger: GTTCGCGTCCACCATGGTGCACACCCTCAACACCAT...CAAGTCCTGAACTGTCACCTTAGTGACACAACCATTGGGATGATGACCAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR CCA 90 bp | GGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATCAGCAGGTTAATGTCTaGCACCGACACCAGAACCAG | + |
Preference number: 2 (lower is better) Translates to: GHHSVEVFVLACVHFHTDQQVNV*HRHQNQ Trigger: CTGGTTCTGGTGTCGGTGCCAGACATTAACCTGCTG...ATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CAA 90 bp | AGGATCTTACATGTAAAGATGGGGCACTCAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAATCCACTGTGACTTCCAGGTCCCCA | + |
Preference number: 2 (lower is better) Translates to: RILHVKMGHSISCTS*STSVRKSTVTSRSP Trigger: TGGGGACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATGTAAGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR TCA 90 bp | AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGCTGATACTGCATTCTTaGCATTCTAGAAGACTTCTG | + |
Preference number: 2 (lower is better) Translates to: NPRSLNLLLASCTSSWLRLILHS*HSRRLL Trigger: CAGAAGTCTTCTAGAATGTCAAGAATGCAGTATCAG...CCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR TCA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTCTTCCCGCTGGGCCTTaGGGAAGCTTGGTTTGCTTA | + |
Preference number: 2 (lower is better) Translates to: VISLLGQGWTSFCRGLCALPAGP*GSLVCL Trigger: TAAGCAAACCAAGCTTCCTCAAGGCCCAGCGGGAAG...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR TCA 90 bp | GAGCCCCTGCATTTGTTTTTGGGTCCCAAGGTAAAGGCTCATCACTCAGGTCAGTCTGGTTTAACATTCTaGTGGGTTTCATGTCAGCAC | + |
Preference number: 2 (lower is better) Translates to: EPLHLFLGPKVKAHHSGQSGLTF*WVSCQH Trigger: GTGCTGACATGAAACCCATCAGAATGTTAAACCAGA...CTGACCTGAGTGATGAGCCTTTACCTTGGGACCCAAAAACAAATGCAGGGGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGGCCTTGATCAGGTATaGGTTGTTCTTCACGTCCAG | + |
Preference number: 2 (lower is better) Translates to: SVISLLGQGWTSFCRGLCGLDQV*VVLHVQ Trigger: CTGGACGTGAAGAACAACCCATACCTGATCAAGGCC...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR-3UTR GCA 90 bp | TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGTCACCAGGTCAAACTTaGTGCTTTCTGTCACAATGT | + |
Preference number: 2 (lower is better) Translates to: SVEVFVLACVHFHTDVHMSPGQT*CFLSQC Trigger: ACATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGA...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR GCA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGACACTCTCATTCTCTaGCCAGCATCTATGTCAATC | + |
Preference number: 2 (lower is better) Translates to: SVISLLGQGWTSFCRGLCDTLIL*PASMSI Trigger: GATTGACATAGATGCTGGGCAGAGAATGAGAGTGTC...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CCA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTC | + |
Preference number: 2 (lower is better) Translates to: VISLLGQGWTSFCRGLCAMSAIE*KMFSAF Trigger: GAATGCAGAGAACATCTTCCATTCAATGGCAGACAT...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR CCA 72 bp | GTACTCGCCCAGTGGCTCCTGGCACATGGCGGCTCCTaGGCAAGCCCCAGAGGGTCAGGGCAGAGGCAGCAG | + |
Preference number: 3 (lower is better) Translates to: VLAQWLLAHGGS*ASPRGSGQRQQ Trigger: CTGCTGCCTCTGCCCTGACCCTCTGGGGCTTGCCCAGGAGCCGCCATGTGCCAGGAGCCACTGGGCGAGTAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR GCA 72 bp | CTACGGCCTGCCCAAGGCCGGGTAGGGAGACCGGATTaGAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGGT | + |
Preference number: 3 (lower is better) Translates to: LRPAQGRVGRPD*REALLPLLGLG Trigger: ACCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 72 bp | TCACCAGGCAGTACTCGCCCAGTGGCTCCTGGCACATaGCGGCTCCTGGGCAAGCCCCAGAGGGTCAGGGCA | + |
Preference number: 3 (lower is better) Translates to: SPGSTRPVAPGT*RLLGKPQRVRA Trigger: TGCCCTGACCCTCTGGGGCTTGCCCAGGAGCCGCCATGTGCCAGGAGCCACTGGGCGAGTACTGCCTGGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 72 bp | AGCCTGGGTGTTACTCACCAGGCAGTACTCGCCCAGTaGCTCCTGGCACATGGCGGCTCCTGGGCAAGCCCC | + |
Preference number: 3 (lower is better) Translates to: SLGVTHQAVLAQ*LLAHGGSWASP Trigger: GGGGCTTGCCCAGGAGCCGCCATGTGCCAGGAGCCACTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CAA 90 bp | GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTCCAGGGCCGGTGAGATaGGATGCTGGCTCCAGGTGG | + |
Preference number: 3 (lower is better) Translates to: EPIPSPSLPWLVVGSSPAPGPVR*DAGSRW Trigger: CCACCTGGAGCCAGCATCCAATCTCACCGGCCCTGG...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR TCA 72 bp | CTCTGCCGGAGGTGGGCACCTGAAGCTCCGAGTGGTTaGCTCGGAGGTCAGGGCCATCAGGTGCACCTGGGT | + |
Preference number: 3 (lower is better) Translates to: LCRRWAPEAPSG*LGGQGHQVHLG Trigger: ACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR TCA 72 bp | GAGGTTCTGGCTTTCCCGTCTCCTCCTGGGAGCGGCTaGGGGGTGAGCTGGCTGCCTAGTGCTGGGTCAGAG | + |
Preference number: 3 (lower is better) Translates to: EVLAFPSPPGSG*GVSWLPSAGSE Trigger: CTCTGACCCAGCACTAGGCAGCCAGCTCACCCCTCAGCCGCTCCCAGGAGGAGACGGGAAAGCCAGAACCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 72 bp | CTCCGAGTGGTTGACTCGGAGGTCAGGGCCATCAGGTaGACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGA | + |
Preference number: 3 (lower is better) Translates to: LRVVDSEVRAIR*TWVIRLACRGG Trigger: TCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCACTCGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CCA 72 bp | AGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTaGCTACGGCCTGCCCAAGGCCGGGTAGGGAGACCG | + |
Preference number: 3 (lower is better) Translates to: SLNLLLASCTSS*LRPAQGRVGRP Trigger: CGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR TCA 72 bp | GCTGGGTCAGAGGGAGTACCGGGGTCTGCAGGTCCTTaGGCTGGTTCCTCAGCTGGAAGAGCTCGGTGGAGG | + |
Preference number: 3 (lower is better) Translates to: AGSEGVPGSAGP*AGSSAGRARWR Trigger: CCTCCACCGAGCTCTTCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCCCGGTACTCCCTCTGACCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 72 bp | TTGAGGAGCAGGCGCTGCATGTGTGGAGGCGCCAAGTaGTGTGCTTGCCCAGGCAGCCGCTGCTTCTGCACA | + |
Preference number: 3 (lower is better) Translates to: LRSRRCMCGGAK*CACPGSRCFCT Trigger: TGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 72 bp | CTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTaGAGGCAGGTTCTTAGGCTCCTTGTGGCCTCAGCT | + |
Preference number: 3 (lower is better) Translates to: LPTLAGGWVQPC*RQVLRLLVASA Trigger: AGCTGAGGCCACAAGGAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR CCA 72 bp | GCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTaGGTCCAGCCCTGCTGGAGGCAGGTTCTTAGGCTC | + |
Preference number: 3 (lower is better) Translates to: ANTIPLPTLAGG*VQPCWRQVLRL Trigger: GAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR CCA 72 bp | TGCTGGGAGCCTGAGCAGCCAGGCCTTGGTGCCAGGTaGCAGAGAACTCGGTGGCTTCTTAGTGCCCCCTCT | + |
Preference number: 3 (lower is better) Translates to: CWEPEQPGLGAR*QRTRWLLSAPS Trigger: AGAGGGGGCACTAAGAAGCCACCGAGTTCTCTGCCACCTGGCACCAAGGCCTGGCTGCTCAGGCTCCCAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR TCA 72 bp | CTTGGAGCCTGGTCTTGCCTCCCAGTAGGACAAGGATaGTGCTGGGAGCCTGAGCAGCCAGGCCTTGGTGCC | + |
Preference number: 3 (lower is better) Translates to: LGAWSCLPVGQG*CWEPEQPGLGA Trigger: GGCACCAAGGCCTGGCTGCTCAGGCTCCCAGCATCATCCTTGTCCTACTGGGAGGCAAGACCAGGCTCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR TCA 72 bp | GGGTTTAGTAGGTTGGCTCTGCCGGAGGTGGGCACCTaGAGCTCCGAGTGGTTGACTCGGAGGTCAGGGCCA | + |
Preference number: 3 (lower is better) Translates to: GFSRLALPEVGT*SSEWLTRRSGP Trigger: TGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAGCCAACCTACTAAACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR GCA 72 bp | CTGGGTGCTCAGAAGCCCAGGGCCGGTGAGATTGGATaGTGGCTCCAGGTGGGCTCTGAAGACTTGCACTGG | + |
Preference number: 3 (lower is better) Translates to: LGAQKPRAGEIG*WLQVGSEDLHW Trigger: CCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCTCACCGGCCCTGGGCTTCTGAGCACCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 72 bp | GCCCAGATCCCTTCCTCAGCCGAGCTGCGAAAGCACTaGAAGCACCTGGACCAAGCACTGCTAGGCGGAGAC | + |
Preference number: 3 (lower is better) Translates to: AQIPSSAELRKH*KHLDQALLGGD Trigger: GTCTCCGCCTAGCAGTGCTTGGTCCAGGTGCTTCCAGTGCTTTCGCAGCTCGGCTGAGGAAGGGATCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 72 bp | GTGGTTGACTCGGAGGTCAGGGCCATCAGGTGCACCTaGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAAT | + |
Preference number: 3 (lower is better) Translates to: VVDSEVRAIRCT*VIRLACRGGSN Trigger: ATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTCAACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR-3UTR CAA 90 bp | GATCCCCTCGCCCACTGCGCTGGTGTCTTACTTCCAGGTGCTGTTTCTGGACTTTACCCTGGCTGGTGGTaGGGTCCAGCCCTGCTGGAG | + |
Preference number: 3 (lower is better) Translates to: DPLAHCAGVLLPGAVSGLYPGWW*GPALLE Trigger: CTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTA...AAGTCCAGAAACAGCACCTGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR GCA 72 bp | AGCTCGGTGGAGGTGAGCAGGATGGTGTTGAGGGTGTaGACCATGGTGGACGCGAACTTGAGGTCCTCCTCC | + |
Preference number: 3 (lower is better) Translates to: SSVEVSRMVLRV*TMVDANLRSSS Trigger: GGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCACCTCCACCGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR GCA 72 bp | GGAGGCGCCAAGTGCTGTGCTTGCCCAGGCAGCCGCTaGTTCTGCACATTTAGCCTGGGTGTTACTCACCAG | + |
Preference number: 3 (lower is better) Translates to: GGAKCCACPGSR*FCTFSLGVTHQ Trigger: CTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAGCACAGCACTTGGCGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 72 bp | CTTGCCCAGGCAGCCGCTGCTTCTGCACATTTAGCCTaGGTGTTACTCACCAGGCAGTACTCGCCCAGTGGC | + |
Preference number: 3 (lower is better) Translates to: LAQAAAASAHLA*VLLTRQYSPSG Trigger: GCCACTGGGCGAGTACTGCCTGGTGAGTAACACCCAGGCTAAATGTGCAGAAGCAGCGGCTGCCTGGGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 72 bp | CAGGTCAGAGATGCTGCCAAGGAGCAAAGGCCCAGGTaGCCATCTAGGCTAGGAAGGTGGCTAGAGCCAGGG | + |
Preference number: 3 (lower is better) Translates to: QVRDAAKEQRPR*PSRLGRWLEPG Trigger: CCCTGGCTCTAGCCACCTTCCTAGCCTAGATGGCCACCTGGGCCTTTGCTCCTTGGCAGCATCTCTGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CCA 72 bp | CAGCCAGGCCTTGGTGCCAGGTGGCAGAGAACTCGGTaGCTTCTTAGTGCCCCCTCTTATCCCAAGAGGCAG | + |
Preference number: 3 (lower is better) Translates to: QPGLGARWQRTR*LLSAPSYPKRQ Trigger: CTGCCTCTTGGGATAAGAGGGGGCACTAAGAAGCCACCGAGTTCTCTGCCACCTGGCACCAAGGCCTGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR TCA 72 bp | AGAAGAGGTTCTGGCTTTCCGGGGTCTGCAGGTCCTTaGGCTGGTTCCTCAGCTGGAAGAGCTCGGTGGAGG | + |
Preference number: 3 (lower is better) Translates to: RRGSGFPGSAGP*AGSSAGRARWR Trigger: CCTCCACCGAGCTCTTCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCCCGGAAAGCCAGAACCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR GCA 72 bp | TTATCTGGAGTGCTGCCTGCTTTGAGGAGCAGGCGCTaGATGTGTGGAGGCGCCAAGTGCTGTGCTTGCCCA | + |
Preference number: 3 (lower is better) Translates to: LSGVLPALRSRR*MCGGAKCCACP Trigger: TGGGCAAGCACAGCACTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR CCA 72 bp | AGTGTAGCTGACAGTGCTGGGGTCCAGGTGCTCTGCTaGGAGGAGCTGAGGCTGACAGAGCCAATACCATCC | + |
Preference number: 3 (lower is better) Translates to: SVADSAGVQVLC*EELRLTEPIPS Trigger: GGATGGTATTGGCTCTGTCAGCCTCAGCTCCTCCCAGCAGAGCACCTGGACCCCAGCACTGTCAGCTACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR CCA 72 bp | AGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTaGCCTGCAGGGGAGGAAGCAATTTCTGCCAACACT | + |
Preference number: 3 (lower is better) Translates to: RSGPSGAPGSSV*PAGEEAISANT Trigger: AGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGATACCCTGGCTGGTGGTaGGGTCCAGCCCTGCTGGAG | + |
Preference number: 3 (lower is better) Translates to: ASALGPRSSSSHRQGLERYPGWW*GPALLE Trigger: CTCCAGCAGGGCTGGACCCAACCACCAGCCAGGGTA...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | AGGTCAGGGCCATCAGGTGCACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAGGATGTCTGCCATaGAATGGAAGATGTTCTCTG | + |
Preference number: 3 (lower is better) Translates to: RSGPSGAPGSSVWPAGEEAGCLP*NGRCSL Trigger: CAGAGAACATCTTCCATTCAATGGCAGACATCCTGC...TTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | TTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGGTGAGCAGGATGGTGTaGAGGGTGTGCACCATGGTG | + |
Preference number: 3 (lower is better) Translates to: FLGLGGRFQTVFSLQQLRVSRMV*RVCTMV Trigger: CACCATGGTGCACACCCTCAACACCATCCTGCTCAC...CCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR GCA 72 bp | GTAGGCTTTGGACAGGCTGAGGTCTTTCTCCTGTTCTaGTGTCTCCAGGGCCTGAGCCATGGCAGCACCAGT | + |
Preference number: 3 (lower is better) Translates to: VGFGQAEVFLLF*CLQGLSHGSTS Trigger: ACTGGTGCTGCCATGGCTCAGGCCCTGGAGACAGCAGAACAGGAGAAAGACCTCAGCCTGTCCAAAGCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR CCA 72 bp | TCCAGCCCTGCTGGAGGCAGGTTCTTAGGCTCCTTGTaGCCTCAGCTTAGAGACCCTGAGTGCTTCTTAGGC | + |
Preference number: 3 (lower is better) Translates to: SSPAGGRFLGSL*PQLRDPECFLG Trigger: GCCTAAGAAGCACTCAGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCTGCCTCCAGCAGGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR CCA 72 bp | GGATGCTGGCTCCAGGTGGGCTCTGAAGACTTGCACTaGAGGATGCTCAGCCAGCTGGAGGAACAAGGAGAA | + |
Preference number: 3 (lower is better) Translates to: GCWLQVGSEDLH*RMLSQLEEQGE Trigger: TTCTCCTTGTTCCTCCAGCTGGCTGAGCATCCTCCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | CACTGTAAACACACGTGTGTTATCTGGAGTGCTGCCTaGTTTGAGGAGCAGGCGCTGCATGTGTGGAGGCGC | + |
Preference number: 3 (lower is better) Translates to: HCKHTCVIWSAA*FEEQALHVWRR Trigger: GCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAACACACGTGTGTTTACAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | AGATTGGATGCTGGCTCCAGGTGGGCTCTGAAGACTTaGACTGGAGGATGCTCAGCCAGCTGGAGGAACAAG | + |
Preference number: 3 (lower is better) Translates to: RLDAGSRWALKT*TGGCSASWRNK Trigger: CTTGTTCCTCCAGCTGGCTGAGCATCCTCCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | TGCTGCTGGGTTAAGCCTACCTTCCCCAGGCTCAGCTaGTTCCTTATAATGAGGGCTGGGGGCTTGCAGAGT | + |
Preference number: 3 (lower is better) Translates to: CCWVKPTFPRLS*FLIMRAGGLQS Trigger: ACTCTGCAAGCCCCCAGCCCTCATTATAAGGAAGCAGCTGAGCCTGGGGAAGGTAGGCTTAACCCAGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR CCA 72 bp | TTTCAAAGTGCTGCAGCAGCTCTGTGTAGTCGATGCTaGGGGAGTCACCTTTCTGGGACTTGGGGGCCGCTT | + |
Preference number: 3 (lower is better) Translates to: FQSAAAALCSRC*GSHLSGTWGPL Trigger: AAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCCCCAGCATCGACTACACAGAGCTGCTGCAGCACTTTGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGC | + |
Preference number: 3 (lower is better) Translates to: HRGTAHGRLWFNILMGFMMVDAN*RSSSRS Trigger: GCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCAT...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR-3UTR CAA 90 bp | GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGGTGAGCAGGATGGTGTaGAGGGTGTGCACCATGGTG | + |
Preference number: 3 (lower is better) Translates to: GPRSSSSHRQGLERGCFWVSRMV*RVCTMV Trigger: CACCATGGTGCACACCCTCAACACCATCCTGCTCAC...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR GCA 72 bp | TCCCCTCGCCCACTGCGCTGGTGTCTTACTTCCAGGTaGTGTTTCTGGACTTTTTCAAAGTGCTGCAGCAGC | + |
Preference number: 3 (lower is better) Translates to: SPRPLRWCLTSR*CFWTFSKCCSS Trigger: GCTGCTGCAGCACTTTGAAAAAGTCCAGAAACAGCACCTGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR CCA 72 bp | TGGGGAGGGCATCGAGGGACAGCCCATGGCAGGCTCTaGTTTAACATTCTGATGGGTTTCATGTCAGCACTG | + |
Preference number: 3 (lower is better) Translates to: WGGHRGTAHGRL*FNILMGFMSAL Trigger: CAGTGCTGACATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATGCCCTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR CCA 72 bp | GCTCTGAAGACTTGCACTGGAGGATGCTCAGCCAGCTaGAGGAACAAGGAGAAGCATCTGCTGGGGTTACAG | + |
Preference number: 3 (lower is better) Translates to: ALKTCTGGCSAS*RNKEKHLLGLQ Trigger: CTGTAACCCCAGCAGATGCTTCTCCTTGTTCCTCCAGCTGGCTGAGCATCCTCCAGTGCAAGTCTTCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR-3UTR CAA 90 bp | CTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATCGGTCCCAGAGGTTCTTAGGCTCCTaGTGGCCTCAGCTTAGAGAC | + |
Preference number: 3 (lower is better) Translates to: LLDSEAVVPTQERIHRSQRFLGS*WPQLRD Trigger: GTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCT...CTGGGACCGATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | CCTGAGGGGCTCTCAGGCAGTGACACACTAGGCAAGGTAGGCTTTGGACAGGCTGCAGGATGTCTGCCATaGAATGGAAGATGTTCTCTG | + |
Preference number: 3 (lower is better) Translates to: PEGLSGSDTLGKVGFGQAAGCLP*NGRCSL Trigger: CAGAGAACATCTTCCATTCAATGGCAGACATCCTGC...AGCCTGTCCAAAGCCTACCTTGCCTAGTGTGTCACTGCCTGAGAGCCCCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR-3UTR CAA 90 bp | GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCGGAAGGGGGAAATTCTaGAGCCCCTGCATTTGTTTT | + |
Preference number: 3 (lower is better) Translates to: EQDGVEGVHHGGRELEVLGRGKF*SPCICF Trigger: AAAACAAATGCAGGGGCTCAAGAATTTCCCCCTTCC...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR-3UTR CAA 90 bp | GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCGAACTGTCGGGCGTATaGGTTGTTGGAGTAAATCCT | + |
Preference number: 3 (lower is better) Translates to: EQDGVEGVHHGGRELEVLELSGV*VVGVNP Trigger: AGGATTTACTCCAACAACCAATACGCCCGACAGTTC...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCATTTTCCGAATCTCCTaGCCATTGTCACCCAGGATC | + |
Preference number: 3 (lower is better) Translates to: EQDGVEGVHHGGRELEVLIFRIS*PLSPRI Trigger: GATCCTGGGTGACAATGGCAAGGAGATTCGGAAAAT...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR TCA 72 bp | ATCCTCAGGGTTGGGTTCGGTCTGCTTCTGTGCTACTaGCTTTGGCTCATCGGGTTCATCATCCTCAGGGGT | + |
Preference number: 3 (lower is better) Translates to: ILRVGFGLLLCY*LWLIGFIILRG Trigger: ACCCCTGAGGATGATGAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR TCA 72 bp | CAGGTGCAGGGTCACTGGAGCCCTATCAGTGTTGGCTaGGGTGAAGACATTGATGCCACTTCCAAAGCTGGA | + |
Preference number: 3 (lower is better) Translates to: QVQGHWSPISVG*GEDIDATSKAG Trigger: TCCAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR GCA 72 bp | TTGATCAGGTATGGGTTGTTCTTCACGTCCAGCAGTTaGAGGCGTAGATCTGCAGCAGGGCAGAAGTCAGGG | + |
Preference number: 3 (lower is better) Translates to: LIRYGLFFTSSS*RRRSAAGQKSG Trigger: CCCTGACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | TGCTTTGGCAGGGAATCCTCAGGGTTGGGTTCGGTCTaGTTCTGTGCTACTGACTTTGGCTCATCGGGTTCA | + |
Preference number: 3 (lower is better) Translates to: CFGRESSGLGSV*FCATDFGSSGS Trigger: TGAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACCGAACCCAACCCTGAGGATTCCCTGCCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR CCA 72 bp | AGGTCCTCCTCCCGAAGCAGGATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTCAGCAGGAGGCAGAGC | + |
Preference number: 3 (lower is better) Translates to: RSSSRSRMSAIE*KMFSAFSRRQS Trigger: GCTCTGCCTCCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGAGGAGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR CCA 72 bp | GCTCAGCCAGCTGGAGGAACAAGGAGAAGCATCTGCTaGGGTTACAGACGAGTTCATCTGCAAGTGTGTGCA | + |
Preference number: 3 (lower is better) Translates to: AQPAGGTRRSIC*GYRRVHLQVCA Trigger: TGCACACACTTGCAGATGAACTCGTCTGTAACCCCAGCAGATGCTTCTCCTTGTTCCTCCAGCTGGCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR CCA 72 bp | CAGAGAGTAGACCTTTCAGAGAGGAGACCTGCATCTTaGAGCCTGGTCTTGCCTCCCAGTAGGACAAGGATG | + |
Preference number: 3 (lower is better) Translates to: QRVDLSERRPAS*SLVLPPSRTRM Trigger: CATCCTTGTCCTACTGGGAGGCAAGACCAGGCTCCAAGATGCAGGTCTCCTCTCTGAAAGGTCTACTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CAA 90 bp | TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGAGGTTCTTAGGCTCCTaGTGGCCTCAGCTTAGAGAC | + |
Preference number: 3 (lower is better) Translates to: CSGAKVKLFSQTGIRKRLRFLGS*WPQLRD Trigger: GTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCT...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR TCA 72 bp | GTGACCCATTTTGAGGAAACAGACAAAACTAAGTTCTaGTGCCACGGCCCTGTCCCACTGCAGCTGGCCCTT | + |
Preference number: 3 (lower is better) Translates to: VTHFEETDKTKF*CHGPVPLQLAL Trigger: AAGGGCCAGCTGCAGTGGGACAGGGCCGTGGCATCAGAACTTAGTTTTGTCTGTTTCCTCAAAATGGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR TCA 72 bp | GAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTaGTGGGTTTCATGTCAGCACTGGCCTGTGTGTATG | + |
Preference number: 3 (lower is better) Translates to: EGQPMAGSGLTF*WVSCQHWPVCM Trigger: CATACACACAGGCCAGTGCTGACATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR TCA 72 bp | ATTCTCTGCCCAGCATCTATGTCAATCCTAGAAGTCTaGACCTGCTTCTGGCCAGCTGCACCTCATCGTGGC | + |
Preference number: 3 (lower is better) Translates to: ILCPASMSILEV*TCFWPAAPHRG Trigger: GCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATTGACATAGATGCTGGGCAGAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | ACCATGTACACAGCTGTGGAGAAGCCTGAACCTACTTaGAGTTCTTTCTTCCCGCTGGGCCTTGAGGAAGCT | + |
Preference number: 3 (lower is better) Translates to: TMYTAVEKPEPT*SSFFPLGLEEA Trigger: AGCTTCCTCAAGGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | GATGCTCAGCCAGCTGGAGGAACAAGGAGAAGCATCTaGTGGGGTTACAGACGAGTTCATCTGCAAGTGTGT | + |
Preference number: 3 (lower is better) Translates to: DAQPAGGTRRSI*WGYRRVHLQVC Trigger: ACACACTTGCAGATGAACTCGTCTGTAACCCCAGCAGATGCTTCTCCTTGTTCCTCCAGCTGGCTGAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | GTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTCTaGCAACACTTCCAGATCCTTCAAGACAACCTCATC | + |
Preference number: 3 (lower is better) Translates to: VIRLACRGGSNF*QHFQILQDNLI Trigger: GATGAGGTTGTCTTGAAGGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR CCA 72 bp | GCTTCTCCACTACACTGTAAACACACGTGTGTTATCTaGAGTGCTGCCTGCTTTGAGGAGCAGGCGCTGCAT | + |
Preference number: 3 (lower is better) Translates to: ASPLHCKHTCVI*SAACFEEQALH Trigger: ATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAACACACGTGTGTTTACAGTGTAGTGGAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR-3UTR CAA 90 bp | ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGC | + |
Preference number: 3 (lower is better) Translates to: TSFCRGLCAGLCAFPHRCMVDAN*RSSSRS Trigger: GCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCAT...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | GGTTGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCTGCAGCAGGGCAGAAGTATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAA | + |
Preference number: 3 (lower is better) Translates to: GCSSRPAVAGVDLQQGRSISCTS*STSVRK Trigger: TTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAAT...ACTTCTGCCCTGCTGCAGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR-3UTR CAA 90 bp | GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGACTCACCAGGTCAAACTaGCTGCTTTCTGTCACAATG | + |
Preference number: 3 (lower is better) Translates to: ASALGPRSSSSHRQGLERLTRSN*LLSVTM Trigger: CATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGAG...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | AGGTGCAGGGTCACTGGAGCCCTATCAGTGTTGGCTGAGGTGAAGACATTGATGTCTGTGATTTCTTTATaGGGGCAGGGATGGACATCA | + |
Preference number: 3 (lower is better) Translates to: RCRVTGALSVLAEVKTLMSVISL*GQGWTS Trigger: TGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA...CATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTTCTTGGAGCCTGGTCTaGCCTCCCAGTAGGACAAGG | + |
Preference number: 3 (lower is better) Translates to: VISLLGQGWTSFCRGLCASWSLV*PPSRTR Trigger: CCTTGTCCTACTGGGAGGCAAGACCAGGCTCCAAGA...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR TCA 72 bp | TCCAGGCCAGCAGAAGGCAAGGTAGATCTATGGCCCTaGCAGGATCTTACATGTAAAGATGGGGCACTCAAT | + |
Preference number: 3 (lower is better) Translates to: SRPAEGKVDLWP*QDLTCKDGALN Trigger: ATTGAGTGCCCCATCTTTACATGTAAGATCCTGTCAGGGCCATAGATCTACCTTGCCTTCTGCTGGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR TCA 72 bp | AGCCTCAAACTCAGAGATATATCTGTCTCTGCCTCCTaGGTGCTGGGATTAAAGGTGTGTGTCTCCACTGCC | + |
Preference number: 3 (lower is better) Translates to: SLKLRDISVSAS*VLGLKVCVSTA Trigger: GGCAGTGGAGACACACACCTTTAATCCCAGCACTCAGGAGGCAGAGACAGATATATCTCTGAGTTTGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR TCA 72 bp | GAGGCGCACACCAAAGCTCAGAGTGTCCAGGAGATTTaGATATCCAAGTTAGACGTAGCCACTTACCACCTC | + |
Preference number: 3 (lower is better) Translates to: EAHTKAQSVQEI*ISKLDVATYHL Trigger: GAGGTGGTAAGTGGCTACGTCTAACTTGGATATTCAAATCTCCTGGACACTCTGAGCTTTGGTGTGCGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | CTCCTGAGTGCTGGGATTAAAGGTGTGTGTCTCCACTaGCCGGCTAGGAAAACTTTTTACCATGTACACAGC | + |
Preference number: 3 (lower is better) Translates to: LLSAGIKGVCLH*PARKTFYHVHS Trigger: GCTGTGTACATGGTAAAAAGTTTTCCTAGCCGGGCAGTGGAGACACACACCTTTAATCCCAGCACTCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR TCA 72 bp | GGCTGTCTGTGTGCCGGAACATCTTTCGAGGAGTTTTaGTGTAGAGATGGTAGAGCCACTTCAGAACAGCAA | + |
Preference number: 3 (lower is better) Translates to: GCLCAGTSFEEF*CRDGRATSEQQ Trigger: TTGCTGTTCTGAAGTGGCTCTACCATCTCTACATCAAAACTCCTCGAAAGATGTTCCGGCACACAGACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTAGGTTCTTAGGCTCCTaGTGGCCTCAGCTTAGAGAC | + |
Preference number: 3 (lower is better) Translates to: VISLLGQGWTSFCRGLCARFLGS*WPQLRD Trigger: GTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCT...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
3UTR TCA 72 bp | TCATCAAGCTCTGGTTACACACATTGGCCACCTCCTTaGTACTTTTCTTGCGGTCATCATAGGCCAAGCATG | + |
Preference number: 3 (lower is better) Translates to: SSSSGYTHWPPP*YFSCGHHRPSM Trigger: CATGCTTGGCCTATGATGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATGTGTGTAACCAGAGCTTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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3UTR TCA 72 bp | TTCAAGACAACCTCATCAGATTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGGCTGTCTGTGTGCCGG | + |
Preference number: 3 (lower is better) Translates to: FKTTSSDSSDNV*SKMGKRLSVCR Trigger: CCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTTGTCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR GCA 72 bp | AGGCGTAGATATGTAAAGATGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCTGTGAGGAAATCCACT | + |
Preference number: 3 (lower is better) Translates to: RRRYVKMGHSIS*TSLSTSVRKST Trigger: AGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATATCTACGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR CCA 72 bp | CCTCATCAGATTCGTCAGATAATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTTC | + |
Preference number: 3 (lower is better) Translates to: PHQIRQIMSEVR*GRGCLCAGTSF Trigger: GAAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR-3UTR CAA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTGAGGTGAAGACATaGATGCCACTTCCAAAGCTG | + |
Preference number: 3 (lower is better) Translates to: SVISLLGQGWTSFCRGLCAEVKT*MPLPKL Trigger: CAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGC...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR TCA 72 bp | TATCACCAATTGCCACCTTCTCTGATACTGCATTCTTaGCATTCTAGAAGACTTCTGGGTGCATCGCCCTCT | + |
Preference number: 3 (lower is better) Translates to: YHQLPPSLILHS*HSRRLLGASPS Trigger: AGAGGGCGATGCACCCAGAAGTCTTCTAGAATGTCAAGAATGCAGTATCAGAGAAGGTGGCAATTGGTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR TCA 72 bp | TGCAGCTGGCCCTTTATCACCAATTGCCACCTTCTCTaGTACTGCATTCTTGACATTCTAGAAGACTTCTGG | + |
Preference number: 3 (lower is better) Translates to: CSWPFITNCHLL*YCILDILEDFW Trigger: CCAGAAGTCTTCTAGAATGTCAAGAATGCAGTATCAGAGAAGGTGGCAATTGGTGATAAAGGGCCAGCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | AGGATCTTACATGTAAAGATGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCTGTGAGGAAATCCACT | + |
Preference number: 3 (lower is better) Translates to: RILHVKMGHSIS*TSLSTSVRKST Trigger: AGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATGTAAGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
3UTR GCA 72 bp | TTGATCAGGTATGGGTTGTTCTTCACGTCCAGCAGTTaGAGGCGTAGATATGTAAAGATGGGGCACTCAATT | + |
Preference number: 3 (lower is better) Translates to: LIRYGLFFTSSS*RRRYVKMGHSI Trigger: AATTGAGTGCCCCATCTTTACATATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
||
3UTR CAA 72 bp | GCTACGGCCTGCCCAAGGCCGGGTAGGGAGACCGGATaGCAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGG | + |
Preference number: 4 (lower is better) Translates to: ATACPRPGRETG*QRGSPSPPGPR Trigger: CCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCCTACCCGGCCTTGGGCAGGCCGTAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
CDS-3UTR TCA 90 bp | AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGAGAGGGACACGGTGGTaGCTGGGTTGTGGCACCAGG | + |
Preference number: 4 (lower is better) Translates to: SQYHPPPYPGWWLGPALLRGTRW*LGCGTR Trigger: CCTGGTGCCACAACCCAGTCACCACCGTGTCCCTCT...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
||
CDS-3UTR TCA 90 bp | GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTTCTGGGGCAACAGCATaGGCAGGCCGTACAGGGCCT | + |
Preference number: 4 (lower is better) Translates to: EPIPSPSLPWLVVGSSPASGATA*AGRTGP Trigger: AGGCCCTGTACGGCCTGCTCATGCTGTTGCCCCAGA...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR TCA 90 bp | GAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCGGCCCGCCAGCTGGATaGATTCCCGCATCCAGCACA | + |
Preference number: 4 (lower is better) Translates to: EADRANTIPLPTLAGGWVGPPAG*IPASST Trigger: TGTGCTGGATGCGGGAATTCATCCAGCTGGCGGGCC...GACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
||
CDS-3UTR TCA 90 bp | CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGGAAGCTCCGAGTGGTTaGCTCGGAGGTCAGGGCCAT | + |
Preference number: 4 (lower is better) Translates to: QSQYHPPPYPGWWLGPALEAPSG*LGGQGH Trigger: ATGGCCCTGACCTCCGAGTCAACCACTCGGAGCTTC...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
||
CDS-3UTR TCA 90 bp | AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGGGGTCTGCAGGTCCTTaGGCTGGTTCCTCAGCTGGA | + |
Preference number: 4 (lower is better) Translates to: SQYHPPPYPGWWLGPALLGSAGP*AGSSAG Trigger: TCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCC...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | GGTGAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCCCCCTTTCCGGCTGTaGGGGTGCTGGGACAGGGCA | + |
Preference number: 4 (lower is better) Translates to: GEQDGVEGVHHGGRELEVPPFRL*GCWDRA Trigger: TGCCCTGTCCCAGCACCCCCACAGCCGGAAAGGGGG...GACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTCACC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CCA 90 bp | AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGGTGGTGACTGGGTTGTaGCACCAGGAGCGGTACAGG | + |
Preference number: 4 (lower is better) Translates to: SQYHPPPYPGWWLGPALLVVTGL*HQERYR Trigger: CCTGTACCGCTCCTGGTGCCACAACCCAGTCACCAC...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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3UTR CAA 72 bp | TGGGTGAGGAAGCAGAGGGACACGGTGGTGACTGGGTaGTGGCACCAGGAGCGGTACAGGCAGCAGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: WVRKQRDTVVTG*WHQERYRQQKR Trigger: CCTCTTCTGCTGCCTGTACCGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCCCTCTGCTTCCTCACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR CAA 72 bp | TGCTGGGTCAGAGGGAGTACCGGGGTCTGCAGGTCCTaGAGCTGGTTCCTCAGCTGGAAGAGCTCGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: CWVRGSTGVCRS*SWFLSWKSSVE Trigger: CTCCACCGAGCTCTTCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCCCGGTACTCCCTCTGACCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCACCTCGGGCCACTTTaGCGATATTGTAGAGGGCCT | + |
Preference number: 4 (lower is better) Translates to: QSQYHPPPYPGWWLGPALHLGPL*RYCRGP Trigger: AGGCCCTCTACAATATCGTCAAAGTGGCCCGAGGTG...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CCA 90 bp | GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTTGTCCCCTCCTGCTTTaGCAGGGAATCCTCAGGGTT | + |
Preference number: 4 (lower is better) Translates to: EPIPSPSLPWLVVGSSPACPLLL*QGILRV Trigger: AACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGACA...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGGCTCTGTGTAGTCGATaGTGGGGGAGTCACCTTTCT | + |
Preference number: 4 (lower is better) Translates to: SQYHPPPYPGWWLGPALLALCSR*WGSHLS Trigger: AGAAAGGTGACTCCCCCAGCATCGACTACACAGAGC...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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3UTR CAA 72 bp | TATAGCTGGGTGCTCAGAAGCCCAGGGCCGGTGAGATaGGATGCTGGCTCCAGGTGGGCTCTGAAGACTTGC | + |
Preference number: 4 (lower is better) Translates to: YSWVLRSPGPVR*DAGSRWALKTC Trigger: GCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCTCACCGGCCCTGGGCTTCTGAGCACCCAGCTATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGAGGCTGCCAGACCGATaGGGCCCCCTTTCCGGCTGT | + |
Preference number: 4 (lower is better) Translates to: GPRSSSSHRQGLERGCFWRLPDR*GPLSGC Trigger: ACAGCCGGAAAGGGGGCCTCATCGGTCTGGCAGCCT...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | GAGCTGCCTGATGATGAACGGGCCTCTGGCCTCCAGGAGCTTCCGTTCACTGCTCACCTCGGGCCACTTTaGCGATATTGTAGAGGGCCT | + |
Preference number: 4 (lower is better) Translates to: ELPDDERASGLQELPFTAHLGPL*RYCRGP Trigger: AGGCCCTCTACAATATCGTCAAAGTGGCCCGAGGTG...AGCAGTGAACGGAAGCTCCTGGAGGCCAGAGGCCCGTTCATCATCAGGCAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGCCTATCAGTGTTGGCTaGGGTGAAGACATTGATGCC | + |
Preference number: 4 (lower is better) Translates to: SQYHPPPYPGWWLGPALLPISVG*GEDIDA Trigger: GGCATCAATGTCTTCACCTCAGCCAACACTGATAGG...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGGCAATAGAGCAGGCTaGCAGACCGATGAGGCCCCC | + |
Preference number: 4 (lower is better) Translates to: HHASALGPRSSSSHRQGLGNRAG*QTDEAP Trigger: GGGGGCCTCATCGGTCTGGCAGCCTGCTCTATTGCC...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGCAGGATGTCTGCCATTaGATGGAAGATGTTCTCTGC | + |
Preference number: 4 (lower is better) Translates to: SQYHPPPYPGWWLGPALLQDVCH*MEDVLC Trigger: GCAGAGAACATCTTCCATTCAATGGCAGACATCCTG...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | TCCCGAAGCAGGATGTCTGCCATTGAATGGAAGATGTTCTCTGCATTCAGCAGGCCCCCTTTCCGGCTGTaGGGGTGCTGGGACAGGGCA | + |
Preference number: 4 (lower is better) Translates to: SRSRMSAIEWKMFSAFSRPPFRL*GCWDRA Trigger: TGCCCTGTCCCAGCACCCCCACAGCCGGAAAGGGGG...CCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CCA 90 bp | CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGGGATCACCAGGATGTTaGCCATCTCAGCAAACTTCA | + |
Preference number: 4 (lower is better) Translates to: QSQYHPPPYPGWWLGPALGSPGC*PSQQTS Trigger: TGAAGTTTGCTGAGATGGCCAACATCCTGGTGATCC...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGAACCTGGACCTCCACTaGCTGTCCCCTCCTGCTTTG | + |
Preference number: 4 (lower is better) Translates to: HTHHASALGPRSSSSHRQNLDLH*LSPPAL Trigger: CAAAGCAGGAGGGGACAGCCAGTGGAGGTCCAGGTT...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGCAGCAGAAGAGGTTCTaGCTTTCCGGGGTCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: HTHHASALGPRSSSSHRQQQKRF*LSGVCR Trigger: CCTGCAGACCCCGGAAAGCCAGAACCTCTTCTGCTG...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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3UTR CAA 72 bp | GGGTCCAGCCCTGCTGGAGGCAGGTTCTTAGGCTCCTaGTGGCCTCAGCTTAGAGACCCTGAGTGCTTCTTA | + |
Preference number: 4 (lower is better) Translates to: GSSPAGGRFLGS*WPQLRDPECFL Trigger: TAAGAAGCACTCAGGGTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCTGCCTCCAGCAGGGCTGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | GGAGCTGAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTCATTGGCCACCTCCTTaGTACTTTTCTTGCGGTCAT | + |
Preference number: 4 (lower is better) Translates to: GAEADRANTIPLPTLAGGHWPPP*YFSCGH Trigger: ATGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATG...ACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTCAGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | GGGAGACCGGATTGCAGAGAGGCTCTCCTTCCCCTCCTGGGCCTCGGTAGTAGCTCTTTCGAGGAGTTTTaGTGTAGAGATGGTAGAGCC | + |
Preference number: 4 (lower is better) Translates to: GRPDCREALLPLLGLGSSSFEEF*CRDGRA Trigger: GGCTCTACCATCTCTACATCAAAACTCCTCGAAAGA...GCTACTACCGAGGCCCAGGAGGGGAAGGAGAGCCTCTCTGCAATCCGGTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: SQYHPPPYPGWWLGPALLSSDNV*SKMGKR Trigger: CCTCTTCCCCATCTTACTTCAGACATTATCTGACGA...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGATGGTGGACGCGAACTTaGGGTCCTCCTCCCGAAGCA | + |
Preference number: 4 (lower is better) Translates to: ASALGPRSSSSHRQGLERWWTRT*GPPPEA Trigger: TGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCA...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR GCA 90 bp | CGCCAGCTGGATGAATTCCCGCATCCAGCACATAGCCGTCAGCTGAATCAGGTCAAGAGAACATTGAAGTaGGGCAGCACGGCACCTCGG | + |
Preference number: 4 (lower is better) Translates to: RQLDEFPHPAHSRQLNQVKRTLK*GSTAPR Trigger: CCGAGGTGCCGTGCTGCCGCACTTCAATGTTCTCTT...GACCTGATTCAGCTGACGGCTATGTGCTGGATGCGGGAATTCATCCAGCTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGAGTCATCCGTCTGGCCTaGAGGGGAGGAAGCAATTTC | + |
Preference number: 4 (lower is better) Translates to: THHASALGPRSSSSHRQGVIRLA*RGGSNF Trigger: GAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGAC...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | TTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCCCCTTTCCGGCTGTaGGGGTGCTGGGACAGGGCA | + |
Preference number: 4 (lower is better) Translates to: FSQTGIRKRLLLDSEAVVPPFRL*GCWDRA Trigger: TGCCCTGTCCCAGCACCCCCACAGCCGGAAAGGGGG...GACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CCA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCACCCGGCCCGCCAGCTaGATGAATTCCCGCATCCAG | + |
Preference number: 4 (lower is better) Translates to: RKRLLLDSEAVVPTQERITRPAS*MNSRIQ Trigger: CTGGATGCGGGAATTCATCCAGCTGGCGGGCCGGGT...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGAACCTGGACCTCCACTaGCTGTCCCCTCCTGCTTTG | + |
Preference number: 4 (lower is better) Translates to: NPRSLNLLLASCTSSWLRNLDLH*LSPPAL Trigger: CAAAGCAGGAGGGGACAGCCAGTGGAGGTCCAGGTT...CCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGAAGTTCATGGTGGGAGTaGAGGGGGAGCCTTCTAAGC | + |
Preference number: 4 (lower is better) Translates to: THHASALGPRSSSSHRQGSSWWE*RGSLLS Trigger: GCTTAGAAGGCTCCCCCTCCACTCCCACCATGAACT...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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3UTR CAA 72 bp | ATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGCAGGATGTCTGCCATT | + |
Preference number: 4 (lower is better) Translates to: MVLRVCTMVDAN*RSSSRSRMSAI Trigger: AATGGCAGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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3UTR CAA 72 bp | GTAAACACACGTGTGTTATCTGGAGTGCTGCCTGCTTaGAGGAGCAGGCGCTGCATGTGTGGAGGCGCCAAG | + |
Preference number: 4 (lower is better) Translates to: VNTRVLSGVLPA*RSRRCMCGGAK Trigger: CTTGGCGCCTCCACACATGCAGCGCCTGCTCCTCAAAGCAGGCAGCACTCCAGATAACACACGTGTGTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CAA 72 bp | GAGATTGGATGCTGGCTCCAGGTGGGCTCTGAAGACTaGCACTGGAGGATGCTCAGCCAGCTGGAGGAACAA | + |
Preference number: 4 (lower is better) Translates to: EIGCWLQVGSED*HWRMLSQLEEQ Trigger: TTGTTCCTCCAGCTGGCTGAGCATCCTCCAGTGCAAGTCTTCAGAGCCCACCTGGAGCCAGCATCCAATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CAA 72 bp | AGGCTCAGCTGCTTCCTTATAATGAGGGCTGGGGGCTaGCAGAGTAACAGATTCCCCAGTTGGCGCTGCACG | + |
Preference number: 4 (lower is better) Translates to: RLSCFLIMRAGG*QSNRFPSWRCT Trigger: CGTGCAGCGCCAACTGGGGAATCTGTTACTCTGCAAGCCCCCAGCCCTCATTATAAGGAAGCAGCTGAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CAA 72 bp | CTCTGGGGCAACAGCATGAGCAGGCCGTACAGGGCCTaGATCAGGTATGGGTTGTTCTTCACGTCCAGCAGT | + |
Preference number: 4 (lower is better) Translates to: LWGNSMSRPYRA*IRYGLFFTSSS Trigger: ACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCATGCTGTTGCCCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGAGGCTGCCAGACCGATaGGGCCCCCTTTCCGGCTGT | + |
Preference number: 4 (lower is better) Translates to: SSSSHRQGLERGCFWILRRLPDR*GPLSGC Trigger: ACAGCCGGAAAGGGGGCCTCATCGGTCTGGCAGCCT...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | AATCCTAGAAGTCTGAACCTGCTTCTGGCCAGCTGCACCTCATCGTGGCTACGGCCCGCAAAAGGGGGATaGAGCTCACCAGGTCAAACT | + |
Preference number: 4 (lower is better) Translates to: NPRSLNLLLASCTSSWLRPAKGG*SSPGQT Trigger: AGTTTGACCTGGTGAGCTTCATCCCCCTTTTGCGGG...CCGTAGCCACGATGAGGTGCAGCTGGCCAGAAGCAGGTTCAGACTTCTAGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGACTGCTTCTGTGCTACTaGCTTTGGCTCATCGGGTTC | + |
Preference number: 4 (lower is better) Translates to: THHASALGPRSSSSHRQGLLLCY*LWLIGF Trigger: GAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAG...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | GGAGGGCATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTCTGCTTCTGTGCTACTaGCTTTGGCTCATCGGGTTC | + |
Preference number: 4 (lower is better) Translates to: GGHRGTAHGRLWFNILMGLLLCY*LWLIGF Trigger: GAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAG...ACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATGCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | GAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCTCTTTCGAGGAGTTTTaGTGTAGAGATGGTAGAGCC | + |
Preference number: 4 (lower is better) Translates to: EADRANTIPLPTLAGGWVSFEEF*CRDGRA Trigger: GGCTCTACCATCTCTACATCAAAACTCCTCGAAAGA...GACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | GGATGGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACCCGGAGGTGGGCACCTaGAGCTCCGAGTGGTTGACT | + |
Preference number: 4 (lower is better) Translates to: GWTSFCRGLCAGLCAFPHPEVGT*SSEWLT Trigger: AGTCAACCACTCGGAGCTTCAGGTGCCCACCTCCGG...GTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR GCA 90 bp | ATGTACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCAATAGAGCAGGCTaGCAGACCGATGAGGCCCCC | + |
Preference number: 4 (lower is better) Translates to: MYTAVEKPEPTCSSFFPLGNRAG*QTDEAP Trigger: GGGGGCCTCATCGGTCTGGCAGCCTGCTCTATTGCC...CAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGACAATCCCGTCCAGGTaGAGGGTCACTGGAGCCCTA | + |
Preference number: 4 (lower is better) Translates to: GPRSSSSHRQGLERGCFWTIPSR*RVTGAL Trigger: TAGGGCTCCAGTGACCCTGCACCTGGACGGGATTGT...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGGGGCACTCAATTAGCTaGACGAGTTTGTCCACCTCT | + |
Preference number: 4 (lower is better) Translates to: HTPCQCSGAKVKLFSQTGGHSIS*TSLSTS Trigger: AGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCC...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR GCA 90 bp | GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGATCCCCTCGCCCACTaGGCTGGTGTCTTACTTCCA | + |
Preference number: 4 (lower is better) Translates to: ASALGPRSSSSHRQGLERDPLAH*AGVLLP Trigger: TGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGATC...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | GGAGCTGAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTCAGAACAGCAATCCTaGTCATCATCCCAATGGTTG | + |
Preference number: 4 (lower is better) Translates to: GAEADRANTIPLPTLAGGSEQQS*SSSQWL Trigger: CAACCATTGGGATGATGACCAGGATTGCTGTTCTGA...ACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTCAGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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3UTR CAA 72 bp | CCGTCCAGGTGCAGGGTCACTGGAGCCCTATCAGTGTaGGCTGAGGTGAAGACATTGATGCCACTTCCAAAG | + |
Preference number: 4 (lower is better) Translates to: PSRCRVTGALSV*AEVKTLMPLPK Trigger: CTTTGGAAGTGGCATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCACCTGGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCGACAGGGCAAACTCCTaGGACAGGGTCTGGATCACG | + |
Preference number: 4 (lower is better) Translates to: RKRLLLDSEAVVPTQERIDRANS*DRVWIT Trigger: CGTGATCCAGACCCTGTCTCAGGAGTTTGCCCTGTC...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCACCTCGGGCCACTTTaGCGATATTGTAGAGGGCCT | + |
Preference number: 4 (lower is better) Translates to: CSGAKVKLFSQTGIRKRLHLGPL*RYCRGP Trigger: AGGCCCTCTACAATATCGTCAAAGTGGCCCGAGGTG...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGACCCGCAAAAGGGGGATaGAGCTCACCAGGTCAAACT | + |
Preference number: 4 (lower is better) Translates to: ASALGPRSSSSHRQGLERPAKGG*SSPGQT Trigger: AGTTTGACCTGGTGAGCTTCATCCCCCTTTTGCGGG...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | CTTAGAACAGCTGGTCCTTTAAATGTGAGGGAGCTGGGGAAGGGGGAAATTCTTGGCCCGCCAGCTGGATaGATTCCCGCATCCAGCACA | + |
Preference number: 4 (lower is better) Translates to: LRTAGPLNVRELGKGEILGPPAG*IPASST Trigger: TGTGCTGGATGCGGGAATTCATCCAGCTGGCGGGCC...AAGAATTTCCCCCTTCCCCAGCTCCCTCACATTTAAAGGACCAGCTGTTCTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGCATTGGCCACCTCCTTaGTACTTTTCTTGCGGTCAT | + |
Preference number: 4 (lower is better) Translates to: HTPCQCSGAKVKLFSQTGHWPPP*YFSCGH Trigger: ATGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATG...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | ACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCCATCATCCTCAGGGGTaGCCAGCTTCATCAAGCTCT | + |
Preference number: 4 (lower is better) Translates to: TQLWRSLNLLAVLSSRWAHHPQG*PASSSS Trigger: AGAGCTTGATGAAGCTGGTCACCCCTGAGGATGATG...GGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTACTCGATCTCCAGCGCTaGAACCTTCCGCTTTTCGTA | + |
Preference number: 4 (lower is better) Translates to: HHASALGPRSSSSHRQGLLDLQR*NLPLFV Trigger: TACGAAAAGCGGAAGGTTGCAGCGCTGGAGATCGAG...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGAAGAGAACATTGAAGTaGGGCAGCACGGCACCTCGG | + |
Preference number: 4 (lower is better) Translates to: GPRSSSSHRQGLERGCFWKRTLK*GSTAPR Trigger: CCGAGGTGCCGTGCTGCCGCACTTCAATGTTCTCTT...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | GCTGAGGCTGACAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGTCACCAGGTCAAACTTaGTGCTTTCTGTCACAATGT | + |
Preference number: 4 (lower is better) Translates to: AEADRANTIPLPTLAGGWSPGQT*CFLSQC Trigger: ACATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGA...CCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTGTCAGCCTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCTGGCTGTCCCCTCCTaGTTTGGCAGGGAATCCTCA | + |
Preference number: 4 (lower is better) Translates to: RKRLLLDSEAVVPTQERILAVPS*FGRESS Trigger: TGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAG...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGACAATCCCGTCCAGGTaGAGGGTCACTGGAGCCCTA | + |
Preference number: 4 (lower is better) Translates to: HRGTAHGRLWFNILMGFMTIPSR*RVTGAL Trigger: TAGGGCTCCAGTGACCCTGCACCTGGACGGGATTGT...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGAGACAGTCTTCAGTCTaGAGCAGCTCAGGGTTGGGC | + |
Preference number: 4 (lower is better) Translates to: CSGAKVKLFSQTGIRKRLRQSSV*SSSGLG Trigger: GCCCAACCCTGAGCTGCTGCAGACTGAAGACTGTCT...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | ACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCCAGCAGGTTAATGTCTaGCACCGACACCAGAACCAG | + |
Preference number: 4 (lower is better) Translates to: TQLWRSLNLLAVLSSRWAQQVNV*HRHQNQ Trigger: CTGGTTCTGGTGTCGGTGCCAGACATTAACCTGCTG...GGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | TTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAGCAGCTCAGGGAATCAGGTCATCTGTaGTCTGGCAGTGGATCACCA | + |
Preference number: 4 (lower is better) Translates to: FLGLGGRFQTVFSLQQLRESGHL*SGSGSP Trigger: TGGTGATCCACTGCCAGACCACAGATGACCTGATTC...CCTGAGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGCACCTTTCTGGGACTTaGGGGCCGCTTTCAGACAGT | + |
Preference number: 4 (lower is better) Translates to: GPRSSSSHRQGLERGCFWHLSGT*GPLSDS Trigger: ACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTG...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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3UTR CAA 72 bp | ATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATCT | + |
Preference number: 4 (lower is better) Translates to: MSRPYRALIRYG*FFTSSSCRRRS Trigger: AGATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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3UTR CAA 72 bp | CCCAATGGTTGTGTCACTAAGGTGACAGTTCAGGACTaGAACAATCCCGTCCAGGTGCAGGGTCACTGGAGC | + |
Preference number: 4 (lower is better) Translates to: PNGCVTKVTVQD*NNPVQVQGHWS Trigger: GCTCCAGTGACCCTGCACCTGGACGGGATTGTTCAAGTCCTGAACTGTCACCTTAGTGACACAACCATTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTACACACTGGAGCCGGTaGGAGAGCAGCTGGAAGGCA | + |
Preference number: 4 (lower is better) Translates to: KLFSQTGIRKRLLLDSEATHWSR*ESSWKA Trigger: TGCCTTCCAGCTGCTCTCTCACCGGCTCCAGTGTGT...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR GCA 90 bp | GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGACTCGATCTCCAGCGCTaGAACCTTCCGCTTTTCGTA | + |
Preference number: 4 (lower is better) Translates to: ASALGPRSSSSHRQGLERLDLQR*NLPLFV Trigger: TACGAAAAGCGGAAGGTTGCAGCGCTGGAGATCGAG...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGATCACGTGCTTGATTTaGATGGTGTTGTTCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: HTHHASALGPRSSSSHRQITCLI*MVLFWA Trigger: GGCCCAGAACAACACCATGCAAATCAAGCACGTGAT...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | GGGAGTCACCTTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCAAGGGTCTGGATCACGTaGTTGATTTGCATGGTGTTG | + |
Preference number: 4 (lower is better) Translates to: GSHLSGTWGPLSDSLQSARVWIT*LICMVL Trigger: CAACACCATGCAAATCAAGCACGTGATCCAGACCCT...TGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | ACCTGGGTCATCCGTCTGGCCTGCAGGGGAGGAAGCAATTTCTGCCAACACTTCAGGGTCTGGATCACGTaGTTGATTTGCATGGTGTTG | + |
Preference number: 4 (lower is better) Translates to: TWVIRLACRGGSNFCQHFRVWIT*LICMVL Trigger: CAACACCATGCAAATCAAGCACGTGATCCAGACCCT...GAAGTGTTGGCAGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGGGCAATAGAGCAGGCTaGCAGACCGATGAGGCCCCC | + |
Preference number: 4 (lower is better) Translates to: SVEVFVLACVHFHTDVHMGNRAG*QTDEAP Trigger: GGGGGCCTCATCGGTCTGGCAGCCTGCTCTATTGCC...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | GAGCAGGATGGTGTTGAGGGTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCTTTTCCGAATCTCCTTaGCATTGTCACCCAGGATCT | + |
Preference number: 4 (lower is better) Translates to: EQDGVEGVHHGGRELEVLFSESP*HCHPGS Trigger: AGATCCTGGGTGACAATGGCAAGGAGATTCGGAAAA...GAGGACCTCAAGTTCGCGTCCACCATGGTGCACACCCTCAACACCATCCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAATCCACTTTTCACATTaGGGTCTGGGTCAGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: HHASALGPRSSSSHRQGLIHFSH*GLGQQP Trigger: TGGCTGCTGACCCAGACCCCAATGTGAAAAGTGGAT...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | CTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATCGGTCCCAGGAATCAGGTCATCTGTaGTCTGGCAGTGGATCACCA | + |
Preference number: 4 (lower is better) Translates to: LLDSEAVVPTQERIHRSQESGHL*SGSGSP Trigger: TGGTGATCCACTGCCAGACCACAGATGACCTGATTC...CTGGGACCGATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTGCCATCAGGTGCACCTaGGTCATCCGTCTGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: TSFCRGLCAGLCAFPHRCAIRCT*VIRLAC Trigger: GCAGGCCAGACGGATGACCCAGGTGCACCTGATGGC...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTGCAGCAGCTCAGGGTTaGGCACACACTGGAGCCGGT | + |
Preference number: 4 (lower is better) Translates to: TSFCRGLCAGLCAFPHRCAAAQG*AHTGAG Trigger: ACCGGCTCCAGTGTGTGCCCAACCCTGAGCTGCTGC...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | GGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGGGGAGTCACCTTTCTaGGACTTGGGGGCCGCTTTC | + |
Preference number: 4 (lower is better) Translates to: GHHSVEVFVLACVHFHTDGESPF*DLGAAF Trigger: GAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCCC...ATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCTGTGTAGTCGATGCTaGGGGAGTCACCTTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: RKRLLLDSEAVVPTQERILCSRC*GSHLSG Trigger: CCCAGAAAGGTGACTCCCCCAGCATCGACTACACAG...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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3UTR CAA 72 bp | ATGAGCAGGCCGTACAGGGCCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGTTGCAGGCGTAGATAT | + |
Preference number: 4 (lower is better) Translates to: MSRPYRALIRYG*FFTSSSCRRRY Trigger: ATATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | TTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCGACAGGGCAAACTCCTaGGACAGGGTCTGGATCACG | + |
Preference number: 4 (lower is better) Translates to: FSQTGIRKRLLLDSEAVVDRANS*DRVWIT Trigger: CGTGATCCAGACCCTGTCTCAGGAGTTTGCCCTGTC...GACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGCTCGATCTCCAGCGCTaGAACCTTCCGCTTTTCGTA | + |
Preference number: 4 (lower is better) Translates to: HRGTAHGRLWFNILMGFMLDLQR*NLPLFV Trigger: TACGAAAAGCGGAAGGTTGCAGCGCTGGAGATCGAG...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGGCTGTCCCCTCCTaGTTTGGCAGGGAATCCTCA | + |
Preference number: 4 (lower is better) Translates to: SSSSHRQGLERGCFWILRLAVPS*FGRESS Trigger: TGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAG...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGGTCAGGGCCATCAGGTaGACCTGGGTCATCCGTCTG | + |
Preference number: 4 (lower is better) Translates to: SVEVFVLACVHFHTDVHMVRAIR*TWVIRL Trigger: CAGACGGATGACCCAGGTGCACCTGATGGCCCTGAC...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
||
CDS-3UTR CCA 90 bp | CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: HTHHASALGPRSSSSHRQMSEVR*GRGCLC Trigger: ACACAGACAGCCTCTTCCCCATCTTACTTCAGACAT...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
||
CDS-3UTR CCA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTGGACACGGTGGTGACTaGGTTGTGGCACCAGGAGCG | + |
Preference number: 4 (lower is better) Translates to: VISLLGQGWTSFCRGLCAGHGGD*VVAPGA Trigger: CGCTCCTGGTGCCACAACCCAGTCACCACCGTGTCC...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
||
CDS-3UTR TCA 90 bp | TGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGCAGACAGGGCAAACTCCTaGGACAGGGTCTGGATCACG | + |
Preference number: 4 (lower is better) Translates to: CRGLCAGLCAFPHRCTYADRANS*DRVWIT Trigger: CGTGATCCAGACCCTGTCTCAGGAGTTTGCCCTGTC...TGCATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR TCA 90 bp | TGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGCACCCCAAACTTCTGGATaGGGTCATAGGCGTGGCGGT | + |
Preference number: 4 (lower is better) Translates to: CRGLCAGLCAFPHRCTYAPQTSG*GHRRGG Trigger: ACCGCCACGCCTATGACCTCATCCAGAAGTTTGGGG...TGCATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
||
CDS-3UTR GCA 90 bp | GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAAGGGTCTGGATCACGTaGTTGATTTGCATGGTGTTG | + |
Preference number: 4 (lower is better) Translates to: ASALGPRSSSSHRQGLERRVWIT*LICMVL Trigger: CAACACCATGCAAATCAAGCACGTGATCCAGACCCT...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
||
CDS-3UTR GCA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCAAGAGGCTGTCTGTGTaGCGGAACATCTTTCGAGGA | + |
Preference number: 4 (lower is better) Translates to: RKRLLLDSEAVVPTQERIKRLSV*RNIFRG Trigger: TCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTT...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
||
CDS-3UTR CCA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTACCCGGCCCGCCAGCTaGATGAATTCCCGCATCCAG | + |
Preference number: 4 (lower is better) Translates to: SVISLLGQGWTSFCRGLCTRPAS*MNSRIQ Trigger: CTGGATGCGGGAATTCATCCAGCTGGCGGGCCGGGT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
||
CDS-3UTR CCA 90 bp | TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGAGCTTCATCAAGCTCTaGTTACACACATTGGCCACC | + |
Preference number: 4 (lower is better) Translates to: CSGAKVKLFSQTGIRKRLSFIKL*LHTLAT Trigger: GGTGGCCAATGTGTGTAACCAGAGCTTGATGAAGCT...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
||
CDS-3UTR CCA 90 bp | GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAAGCTTCATCAAGCTCTaGTTACACACATTGGCCACC | + |
Preference number: 4 (lower is better) Translates to: ASALGPRSSSSHRQGLERSFIKL*LHTLAT Trigger: GGTGGCCAATGTGTGTAACCAGAGCTTGATGAAGCT...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
||
CDS-3UTR CCA 90 bp | GGCAAGGTAGGCTTTGGACAGGCTGAGGTCTTTCTCCTGTTCTGCTGTCTCCAGTCAGAACAGCAATCCTaGTCATCATCCCAATGGTTG | + |
Preference number: 4 (lower is better) Translates to: GKVGFGQAEVFLLFCCLQSEQQS*SSSQWL Trigger: CAACCATTGGGATGATGACCAGGATTGCTGTTCTGA...CTGGAGACAGCAGAACAGGAGAAAGACCTCAGCCTGTCCAAAGCCTACCTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
||
CDS-3UTR CCA 90 bp | TTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCAGTAGGAGTTCATGGTaGGAGTGGAGGGGGAGCCTT | + |
Preference number: 4 (lower is better) Translates to: FSQTGIRKRLLLDSEAVVSRSSW*EWRGSL Trigger: AAGGCTCCCCCTCCACTCCCACCATGAACTCCTACT...GACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
||
CDS-3UTR CCA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCGGCCTTGATCAGGTATaGGTTGTTCTTCACGTCCAG | + |
Preference number: 4 (lower is better) Translates to: RKRLLLDSEAVVPTQERIGLDQV*VVLHVQ Trigger: CTGGACGTGAAGAACAACCCATACCTGATCAAGGCC...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR TCA 90 bp | AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTCATCATCCTCAGGGGTaGCCAGCTTCATCAAGCTCT | + |
Preference number: 4 (lower is better) Translates to: KLFSQTGIRKRLLLDSEAHHPQG*PASSSS Trigger: AGAGCTTGATGAAGCTGGTCACCCCTGAGGATGATG...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTAAGAGAACATTGAAGTaGGGCAGCACGGCACCTCGG | + |
Preference number: 4 (lower is better) Translates to: TSFCRGLCAGLCAFPHRCKRTLK*GSTAPR Trigger: CCGAGGTGCCGTGCTGCCGCACTTCAATGTTCTCTT...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGATGGTGTTGAGGGTGTaGACCATGGTGGACGCGAAC | + |
Preference number: 4 (lower is better) Translates to: SVEVFVLACVHFHTDVHMMVLRV*TMVDAN Trigger: GTTCGCGTCCACCATGGTGCACACCCTCAACACCAT...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
||
CDS-3UTR CCA 90 bp | ATGTACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGATCCACTTTTCACATTaGGGTCTGGGTCAGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: MYTAVEKPEPTCSSFFPLIHFSH*GLGQQP Trigger: TGGCTGCTGACCCAGACCCCAATGTGAAAAGTGGAT...CAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTCAGCAGGTTAATGTCTaGCACCGACACCAGAACCAG | + |
Preference number: 4 (lower is better) Translates to: KLFSQTGIRKRLLLDSEAQQVNV*HRHQNQ Trigger: CTGGTTCTGGTGTCGGTGCCAGACATTAACCTGCTG...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | TCCCGAAGCAGGATGTCTGCCATTGAATGGAAGATGTTCTCTGCATTCAGCAGGTTGTCACCCAGGATCTaGAAGAGCCCATCTAGGATC | + |
Preference number: 4 (lower is better) Translates to: SRSRMSAIEWKMFSAFSRLSPRI*KSPSRI Trigger: GATCCTAGATGGGCTCTTCCAGATCCTGGGTGACAA...CCTGCTGAATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | TGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGCATGTCCCCTCCTGCTTTaGCAGGGAATCCTCAGGGTT | + |
Preference number: 4 (lower is better) Translates to: CRGLCAGLCAFPHRCTYACPLLL*QGILRV Trigger: AACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGACA...TGCATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | GGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGAGCCTTCTAAGCCTTTaGTACTGGGAGGGTTTAGTA | + |
Preference number: 4 (lower is better) Translates to: GPRSSSSHRQGLERGCFWSLLSL*YWEGLV Trigger: TACTAAACCCTCCCAGTACCAAAGGCTTAGAAGGCT...CCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTAGCTGGTTCCTCAGCTaGAAGAGCTCGGTGGAGGTG | + |
Preference number: 4 (lower is better) Translates to: VISLLGQGWTSFCRGLCASWFLS*KSSVEV Trigger: CACCTCCACCGAGCTCTTCCAGCTGAGGAACCAGCT...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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3UTR CAA 72 bp | CTGAACCTACTTGCAGTTCTTTCTTCCCGCTGGGCCTaGAGGAAGCTTGGTTTGCTTAGCATCTTTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: LNLLAVLSSRWA*RKLGLLSIFAV Trigger: GACAGCAAAGATGCTAAGCAAACCAAGCTTCCTCAAGGCCCAGCGGGAAGAAAGAACTGCAAGTAGGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCCTATCAGTGTTGGCTaGGGTGAAGACATTGATGCC | + |
Preference number: 4 (lower is better) Translates to: SSSSHRQGLERGCFWILRPISVG*GEDIDA Trigger: GGCATCAATGTCTTCACCTCAGCCAACACTGATAGG...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | GGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATATCATAGGCCAAGCATaGCAGGACAGCAGTCAGGAT | + |
Preference number: 4 (lower is better) Translates to: GHHSVEVFVLACVHFHTDIIGQA*QDSSQD Trigger: ATCCTGACTGCTGTCCTGCCATGCTTGGCCTATGAT...ATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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3UTR CAA 72 bp | CATGTAAAGATGGGGCACTCAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAATCCACTGTGACTTCC | + |
Preference number: 4 (lower is better) Translates to: HVKMGHSISCTS*STSVRKSTVTS Trigger: GGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | GGATGGACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACGGAGGAAGCAATTTCTaGCAACACTTCCAGATCCTT | + |
Preference number: 4 (lower is better) Translates to: GWTSFCRGLCAGLCAFPHGGSNF*QHFQIL Trigger: AAGGATCTGGAAGTGTTGGCAGAAATTGCTTCCTCC...GTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGTCCATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR GCA 90 bp | TCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTACATATGATCACGTGCTTGATTTaGATGGTGTTGTTCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: SVEVFVLACVHFHTDVHMITCLI*MVLFWA Trigger: GGCCCAGAACAACACCATGCAAATCAAGCACGTGAT...CATATGTACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | ATGTACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGTCACCAGGTCAAACTTaGTGCTTTCTGTCACAATGT | + |
Preference number: 4 (lower is better) Translates to: MYTAVEKPEPTCSSFFPLSPGQT*CFLSQC Trigger: ACATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGA...CAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | TCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGTTTTCCGAATCTCCTTaGCATTGTCACCCAGGATCT | + |
Preference number: 4 (lower is better) Translates to: SSSSHRQGLERGCFWILRFSESP*HCHPGS Trigger: AGATCCTGGGTGACAATGGCAAGGAGATTCGGAAAA...CCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTTTGTCACCCAGGATCTaGAAGAGCCCATCTAGGATC | + |
Preference number: 4 (lower is better) Translates to: VISLLGQGWTSFCRGLCALSPRI*KSPSRI Trigger: GATCCTAGATGGGCTCTTCCAGATCCTGGGTGACAA...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | ACATCATTCTGTAGAGGTCTTTGTGCTGGCCTGTGTGCATTTCCACACAGATGTGGATCACCAGGATGTTaGCCATCTCAGCAAACTTCA | + |
Preference number: 4 (lower is better) Translates to: TSFCRGLCAGLCAFPHRCGSPGC*PSQQTS Trigger: TGAAGTTTGCTGAGATGGCCAACATCCTGGTGATCC...ACATCTGTGTGGAAATGCACACAGGCCAGCACAAAGACCTCTACAGAATGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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3UTR CAA 72 bp | TATGTAAAGATGGGGCACTCAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAATCCACTGTGACTTCC | + |
Preference number: 4 (lower is better) Translates to: YVKMGHSISCTS*STSVRKSTVTS Trigger: GGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTTTACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213003.2 |
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CDS-3UTR GCA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTAAGAGGCTGTCTGTGTaGCGGAACATCTTTCGAGGA | + |
Preference number: 4 (lower is better) Translates to: SVISLLGQGWTSFCRGLCKRLSV*RNIFRG Trigger: TCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTATCATAGGCCAAGCATaGCAGGACAGCAGTCAGGAT | + |
Preference number: 4 (lower is better) Translates to: SVISLLGQGWTSFCRGLCIIGQA*QDSSQD Trigger: ATCCTGACTGCTGTCCTGCCATGCTTGGCCTATGAT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR GCA 90 bp | AAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTTGTCTTACTTCCAGGTaGTGTTTCTGGACTTTTTCA | + |
Preference number: 4 (lower is better) Translates to: KLFSQTGIRKRLLLDSEACLTSR*CFWTFS Trigger: TGAAAAAGTCCAGAAACAGCACCTGGAAGTAAGACA...AGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CCA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: VISLLGQGWTSFCRGLCAMSEVR*GRGCLC Trigger: ACACAGACAGCCTCTTCCCCATCTTACTTCAGACAT...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR TCA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: SVISLLGQGWTSFCRGLCSSDNV*SKMGKR Trigger: CCTCTTCCCCATCTTACTTCAGACATTATCTGACGA...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CCA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTATGTCTGCCATTGAATaGAAGATGTTCTCTGCATTC | + |
Preference number: 4 (lower is better) Translates to: SVISLLGQGWTSFCRGLCMSAIE*KMFSAF Trigger: GAATGCAGAGAACATCTTCCATTCAATGGCAGACAT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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3UTR CAA 72 bp | TCATCTGCAAGTGTGTGCATAGGGAGACTTTTTGTTTaGTTGTTCAAGATAAGGTTTCTCTGTGTAGCCTTG | + |
Preference number: 4 (lower is better) Translates to: SSASVCIGRLFV*LFKIRFLCVAL Trigger: CAAGGCTACACAGAGAAACCTTATCTTGAACAACAAAACAAAAAGTCTCCCTATGCACACACTTGCAGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGGATCCACTTTTCACATaGGGGTCTGGGTCAGCAGCC | + |
Preference number: 5 (lower is better) Translates to: SQYHPPPYPGWWLGPALLDPLFT*GSGSAA Trigger: GGCTGCTGACCCAGACCCCAATGTGAAAAGTGGATC...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGACGGTGGTGACTGGGTaGTGGCACCAGGAGCGGTAC | + |
Preference number: 5 (lower is better) Translates to: HTPCQCSGAKVKLFSQTGTVVTG*WHQERY Trigger: GTACCGCTCCTGGTGCCACAACCCAGTCACCACCGT...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CAA 90 bp | CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATGGTGGACGCGAACTaGAGGTCCTCCTCCCGAAGC | + |
Preference number: 5 (lower is better) Translates to: HTPCQCSGAKVKLFSQTGMVDAN*RSSSRS Trigger: GCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCAT...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CAA 90 bp | CTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATCGGTCCCAGTGCAGCAGCTCAGGGTaGGGCACACACTGGAGCCGG | + |
Preference number: 5 (lower is better) Translates to: LLDSEAVVPTQERIHRSQCSSSG*GTHWSR Trigger: CCGGCTCCAGTGTGTGCCCAACCCTGAGCTGCTGCA...CTGGGACCGATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CAA 90 bp | CAGAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGGCTGAGGTGAAGACATaGATGCCACTTCCAAAGCTG | + |
Preference number: 5 (lower is better) Translates to: QSQYHPPPYPGWWLGPALAEVKT*MPLPKL Trigger: CAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGC...CAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | GAGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGTCTGGATCACGTGCTaGATTTGCATGGTGTTGTTC | + |
Preference number: 5 (lower is better) Translates to: EPIPSPSLPWLVVGSSPAVWITC*ICMVLF Trigger: GAACAACACCATGCAAATCAAGCACGTGATCCAGAC...AGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CAA 90 bp | AGCCAATACCATCCCCCTCCCTACCCTGGCTGGTGGTTGGGTCCAGCCCTGCTGATTTTCCGAATCTCCTaGCCATTGTCACCCAGGATC | + |
Preference number: 5 (lower is better) Translates to: SQYHPPPYPGWWLGPALLIFRIS*PLSPRI Trigger: GATCCTGGGTGACAATGGCAAGGAGATTCGGAAAAT...CAGCAGGGCTGGACCCAACCACCAGCCAGGGTAGGGAGGGGGATGGTATTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS TCA 90 bp | GCTGGGACAGGGCAAACTCCTGAGACAGGGTCTGGATCACGTGCTTaGTTTGCATGGTGTTGTTCTGGGCCACAAAGTCCCGCACCAGCT | + |
Preference number: 5 (lower is better) Translates to: AGTGQTPETGSGSRA*FAWCCSGPQSPAPA Trigger: AGCTGGTGCGGGACTTTGTGGCCCAGAACAACACCATGCAAATCAAGCACGTGATCCAGACCCTGTCTCAGGAGTTTGCCCTGTCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CAA 90 bp | TCCGGGGTCTGCAGGTCCTTGAGCTGGTTCCTCAGCTGGAAGAGCTCGGTGGAGGAACTGTCGGGCGTATaGGTTGTTGGAGTAAATCCT | + |
Preference number: 5 (lower is better) Translates to: SGVCRSLSWFLSWKSSVEELSGV*VVGVNP Trigger: AGGATTTACTCCAACAACCAATACGCCCGACAGTTC...CTCCACCGAGCTCTTCCAGCTGAGGAACCAGCTCAAGGACCTGCAGACCCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | CACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGGATCACGTGCTTGATTaGCATGGTGTTGTTCTGGGC | + |
Preference number: 5 (lower is better) Translates to: HTPCQCSGAKVKLFSQTGDHVLD*HGVVLG Trigger: GCCCAGAACAACACCATGCAAATCAAGCACGTGATC...CCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CAA 90 bp | GGAGGGCATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTGATCACGTGCTTGATTaGCATGGTGTTGTTCTGGGC | + |
Preference number: 5 (lower is better) Translates to: GGHRGTAHGRLWFNILMGDHVLD*HGVVLG Trigger: GCCCAGAACAACACCATGCAAATCAAGCACGTGATC...ACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATGCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | GAGGGGCTCTCAGGCAGTGACACACTAGGCAAGGTAGGCTTTGGACAGGCTGAGGTCTGGATCACGTGCTaGATTTGCATGGTGTTGTTC | + |
Preference number: 5 (lower is better) Translates to: EGLSGSDTLGKVGFGQAEVWITC*ICMVLF Trigger: GAACAACACCATGCAAATCAAGCACGTGATCCAGAC...CTCAGCCTGTCCAAAGCCTACCTTGCCTAGTGTGTCACTGCCTGAGAGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | GTGTGCACCATGGTGGACGCGAACTTGAGGTCCTCCTCCCGAAGCAGGATGTCTATTTTCCGAATCTCCTaGCCATTGTCACCCAGGATC | + |
Preference number: 5 (lower is better) Translates to: VCTMVDANLRSSSRSRMSIFRIS*PLSPRI Trigger: GATCCTGGGTGACAATGGCAAGGAGATTCGGAAAAT...AGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCACCATGGTGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATGGATCACCAGGATGTaGGCCATCTCAGCAAACTTC | + |
Preference number: 5 (lower is better) Translates to: THHASALGPRSSSSHRQGWITRM*AISANF Trigger: GAAGTTTGCTGAGATGGCCAACATCCTGGTGATCCA...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | GGGAGTCACCTTTCTGGGACTTGGGGGCCGCTTTCAGACAGTCTTCAGTCTGCATGGATCACCAGGATGTaGGCCATCTCAGCAAACTTC | + |
Preference number: 5 (lower is better) Translates to: GSHLSGTWGPLSDSLQSAWITRM*AISANF Trigger: GAAGTTTGCTGAGATGGCCAACATCCTGGTGATCCA...TGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCGTGAGCAGGATGGTGTaGAGGGTGTGCACCATGGTG | + |
Preference number: 5 (lower is better) Translates to: RKRLLLDSEAVVPTQERIVSRMV*RVCTMV Trigger: CACCATGGTGCACACCCTCAACACCATCCTGCTCAC...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CAA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCTCACCTTTCTGGGACTaGGGGGCCGCTTTCAGACAG | + |
Preference number: 5 (lower is better) Translates to: RKRLLLDSEAVVPTQERISPFWD*GAAFRQ Trigger: CTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGA...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CAA 90 bp | ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTGATTTGCATGGTGTaGTTCTGGGCCACAAAGTCC | + |
Preference number: 5 (lower is better) Translates to: THHASALGPRSSSSHRQGLICMV*FWATKS Trigger: GGACTTTGTGGCCCAGAACAACACCATGCAAATCAA...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CAA 90 bp | GATCCCCTCGCCCACTGCGCTGGTGTCTTACTTCCAGGTGCTGTTTCTGGACTTGTCTGGATCACGTGCTaGATTTGCATGGTGTTGTTC | + |
Preference number: 5 (lower is better) Translates to: DPLAHCAGVLLPGAVSGLVWITC*ICMVLF Trigger: GAACAACACCATGCAAATCAAGCACGTGATCCAGAC...AAGTCCAGAAACAGCACCTGGAAGTAAGACACCAGCGCAGTGGGCGAGGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CAA 90 bp | CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGGATCCACTTTTCACATaGGGGTCTGGGTCAGCAGCC | + |
Preference number: 5 (lower is better) Translates to: HRGTAHGRLWFNILMGFMDPLFT*GSGSAA Trigger: GGCTGCTGACCCAGACCCCAATGTGAAAAGTGGATC...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | ACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGACTCACCAGGTCAAACTaGCTGCTTTCTGTCACAATG | + |
Preference number: 5 (lower is better) Translates to: THHASALGPRSSSSHRQGLTRSN*LLSVTM Trigger: CATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGAG...TCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | CACACACACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGCTCTGGTTACACACATaGGCCACCTCCTTGATACTT | + |
Preference number: 5 (lower is better) Translates to: HTHHASALGPRSSSSHRQLWLHT*ATSLIL Trigger: AAGTATCAAGGAGGTGGCCAATGTGTGTAACCAGAG...CTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | CACCATGCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTACTCACCAGGTCAAACTaGCTGCTTTCTGTCACAATG | + |
Preference number: 5 (lower is better) Translates to: HHASALGPRSSSSHRQGLLTRSN*LLSVTM Trigger: CATTGTGACAGAAAGCAGCAAGTTTGACCTGGTGAG...TAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGCATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | TGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAGGCTGGAACTGTCGGGCGTATaGGTTGTTGGAGTAAATCCT | + |
Preference number: 5 (lower is better) Translates to: CSGAKVKLFSQTGIRKRLELSGV*VVGVNP Trigger: AGGATTTACTCCAACAACCAATACGCCCGACAGTTC...CAGCCTCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | GCCAGTGCTCTGGGGCCAAGGTCAAGCTCTTCTCACAGACAGGGATTAGAAAGAATTAGCTGCACGAGTTaGTCCACCTCTGTGAGGAAA | + |
Preference number: 5 (lower is better) Translates to: ASALGPRSSSSHRQGLERISCTS*STSVRK Trigger: TTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAAT...TCTTTCTAATCCCTGTCTGTGAGAAGAGCTTGACCTTGGCCCCAGAGCACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CAA 90 bp | CATCGAGGGACAGCCCATGGCAGGCTCTGGTTTAACATTCTGATGGGTTTCATGACATTGGCCACCTCCTaGATACTTTTCTTGCGGTCA | + |
Preference number: 5 (lower is better) Translates to: HRGTAHGRLWFNILMGFMTLATS*ILFLRS Trigger: TGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATGT...CATGAAACCCATCAGAATGTTAAACCAGAGCCTGCCATGGGCTGTCCCTCGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | AAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCCATGCAGGATGTCTGCCATaGAATGGAAGATGTTCTCTG | + |
Preference number: 5 (lower is better) Translates to: KRLLLDSEAVVPTQERIHAGCLP*NGRCSL Trigger: CAGAGAACATCTTCCATTCAATGGCAGACATCCTGC...ATGGATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CAA 90 bp | AGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCCCGACTCAGGAGAGAATCTTGATCAGGTATGGGTaGTTCTTCACGTCCAGCAGT | + |
Preference number: 5 (lower is better) Translates to: RKRLLLDSEAVVPTQERILIRYG*FFTSSS Trigger: ACTGCTGGACGTGAAGAACAACCCATACCTGATCAA...GATTCTCTCCTGAGTCGGGACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034190.11 |
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CDS-3UTR CAA 90 bp | ATGTACACAGCTGTGGAGAAGCCTGAACCTACTTGCAGTTCTTTCTTCCCGCTGCTCTGGTTACACACATaGGCCACCTCCTTGATACTT | + |
Preference number: 5 (lower is better) Translates to: MYTAVEKPEPTCSSFFPLLWLHT*ATSLIL Trigger: AAGTATCAAGGAGGTGGCCAATGTGTGTAACCAGAG...CAGCGGGAAGAAAGAACTGCAAGTAGGTTCAGGCTTCTCCACAGCTGTGTACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | TTCTCACAGACAGGGATTAGAAAGAGGCTGCTTCTGGATTCTGAGGCTGTAGTCTTGATTTGCATGGTGTaGTTCTGGGCCACAAAGTCC | + |
Preference number: 5 (lower is better) Translates to: FSQTGIRKRLLLDSEAVVLICMV*FWATKS Trigger: GGACTTTGTGGCCCAGAACAACACCATGCAAATCAA...GACTACAGCCTCAGAATCCAGAAGCAGCCTCTTTCTAATCCCTGTCTGTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS CCA 90 bp | CCTTTGGTACCTCATCAGATTCGTCAGATAATGTCTGAAGTAAGATaGGGAAGAGGCTGTCTGTGTGCCGGAACATCTTTCGAGGAGTTT | + |
Preference number: 5 (lower is better) Translates to: PLVPHQIRQIMSEVR*GRGCLCAGTSFEEF Trigger: AAACTCCTCGAAAGATGTTCCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTACCAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | GTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTGCTGCTGAGGTGAAGACATaGATGCCACTTCCAAAGCTG | + |
Preference number: 5 (lower is better) Translates to: VISLLGQGWTSFCRGLCAAEVKT*MPLPKL Trigger: CAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGC...AGCACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS-3UTR CAA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTTTGATTTGCATGGTGTaGTTCTGGGCCACAAAGTCC | + |
Preference number: 5 (lower is better) Translates to: SVISLLGQGWTSFCRGLCLICMV*FWATKS Trigger: GGACTTTGTGGCCCAGAACAACACCATGCAAATCAA...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS-3UTR CAA 90 bp | TCTGTGATTTCTTTATTGGGGCAGGGATGGACATCATTCTGTAGAGGTCTTTGTACATTGGCCACCTCCTaGATACTTTTCTTGCGGTCA | + |
Preference number: 5 (lower is better) Translates to: SVISLLGQGWTSFCRGLCTLATS*ILFLRS Trigger: TGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATGT...ACAAAGACCTCTACAGAATGATGTCCATCCCTGCCCCAATAAAGAAATCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS CAA 72 bp | TCAGCAGCCAACTTACTCAGTCCATCGAAGAGAACATaGAAGTGCGGCAGCACGGCACCTCGGGCCACTTTG | + |
Preference number: 6 (lower is better) Translates to: SAANLLSPSKRT*KCGSTAPRATL Trigger: CAAAGTGGCCCGAGGTGCCGTGCTGCCGCACTTCAATGTTCTCTTCGATGGACTGAGTAAGTTGGCTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS TCA 72 bp | GGGCAAACTCCTGAGACAGGGTCTGGATCACGTGCTTaGTTTGCATGGTGTTGTTCTGGGCCACAAAGTCCC | + |
Preference number: 6 (lower is better) Translates to: GQTPETGSGSRA*FAWCCSGPQSP Trigger: GGGACTTTGTGGCCCAGAACAACACCATGCAAATCAAGCACGTGATCCAGACCCTGTCTCAGGAGTTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 ENSMUST00000213003.2 |
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CDS CAA 72 bp | AAGAGGCGGTCCAGGAGCTCAGATCCACTTTTCACATaGGGGTCTGGGTCAGCAGCCAACTTACTCAGTCCA | + |
Preference number: 6 (lower is better) Translates to: KRRSRSSDPLFT*GSGSAANLLSP Trigger: TGGACTGAGTAAGTTGGCTGCTGACCCAGACCCCAATGTGAAAAGTGGATCTGAGCTCCTGGACCGCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034190.11 ENSMUST00000212829.2 |
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CDS TCA 72 bp | GCCTTTGGTACCTCATCAGATTCGTCAGATAATGTCTaGAGTAAGATGGGGAAGAGGCTGTCTGTGTGCCGG | + |
Preference number: 6 (lower is better) Translates to: AFGTSSDSSDNV*SKMGKRLSVCR Trigger: CCGGCACACAGACAGCCTCTTCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTACCAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212829.2 |