Pregenerated sensors for UXS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057363Ensembl transcript IDs: ENSMUST00000076997.13, ENSMUST00000126008.8, ENSMUST00000128261.2, ENSMUST00000136704.2, ENSMUST00000139451.8, ENSMUST00000153317.6
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATCAGTGCTACCAGGCCATTCACCAGATCACTTACGTACTGGAATaGCCGTGTCTGAGACCCAGAGCCATAGACTGTGAGTGGCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: HQCYQAIHQITYVLE*PCLRPRAIDCEWLP Trigger: GGGGAGCCACTCACAGTCTATGGCTCTGGGTCTCAGACACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTAGCACTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR CCA 90 bp | TCTCTGCAACACGTTTGCCCTCATCATAGCAGGCTCGGGGTCCTATaGGATTCACATGGCCCCAGTAGTCCTCACTTTGAGGGTGGACCT | + |
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Preference number: 1 (lower is better) Translates to: SLQHVCPHHSRLGVL*DSHGPSSPHFEGGP Trigger: AGGTCCACCCTCAAAGTGAGGACTACTGGGGCCATGTGAATCCCATAGGACCCCGAGCCTGCTATGATGAGGGCAAACGTGTTGCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR CCA 90 bp | CCACCCGTACTTCCACACCTTCCTGCTTCATGTAGGCATAGCACATaGTCTCTGCAACACGTTTGCCCTCATCATAGCAGGCTCGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: PPVLPHLPASCRHST*SLQHVCPHHSRLGV Trigger: GACCCCGAGCCTGCTATGATGAGGGCAAACGTGTTGCAGAGACCATGTGCTATGCCTACATGAAGCAGGAAGGTGTGGAAGTACGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR GCA 90 bp | CTTCCTGCTTCATGTAGGCATAGCACATGGTCTCTGCAACACGTTTaGCCTCATCATAGCAGGCTCGGGGTCCTATGGGATTCACATGGC | + |
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Preference number: 1 (lower is better) Translates to: LPASCRHSTWSLQHV*PHHSRLGVLWDSHG Trigger: GCCATGTGAATCCCATAGGACCCCGAGCCTGCTATGATGAGGGCAAACGTGTTGCAGAGACCATGTGCTATGCCTACATGAAGCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR GCA 90 bp | TACTTCCACACCTTCCTGCTTCATGTAGGCATAGCACATGGTCTCTaGAACACGTTTGCCCTCATCATAGCAGGCTCGGGGTCCTATGGG | + |
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Preference number: 1 (lower is better) Translates to: YFHTFLLHVGIAHGL*NTFALIIAGSGSYG Trigger: CCCATAGGACCCCGAGCCTGCTATGATGAGGGCAAACGTGTTGCAGAGACCATGTGCTATGCCTACATGAAGCAGGAAGGTGTGGAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR GCA 90 bp | CCCATCATTCATGTGCATTCTCGGCCCAAAGGTGTTGAAGATCCTTaGCACCCGTACTTCCACACCTTCCTGCTTCATGTAGGCATAGCA | + |
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Preference number: 1 (lower is better) Translates to: PIIHVHSRPKGVEDP*HPYFHTFLLHVGIA Trigger: TGCTATGCCTACATGAAGCAGGAAGGTGTGGAAGTACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGAGAATGCACATGAATGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR GCA 90 bp | AGTGCTTGTAAGATGAAGTTGCTGACCACCCGCCCATCATTCATGTaGATTCTCGGCCCAAAGGTGTTGAAGATCCTTGCCACCCGTACT | + |
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Preference number: 1 (lower is better) Translates to: SACKMKLLTTRPSFM*ILGPKVLKILATRT Trigger: AGTACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGAGAATGCACATGAATGATGGGCGGGTGGTCAGCAACTTCATCTTACAAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR GCA 90 bp | TGGATTTCCCAAGTTGACAGGACTGCTGACATTGCTGTTCATCAGTaGTACCAGGCCATTCACCAGATCACTTACGTACTGGAATGCCCG | + |
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Preference number: 1 (lower is better) Translates to: WISQVDRTADIAVHQ*YQAIHQITYVLECP Trigger: CGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTAGCACTGATGAACAGCAATGTCAGCAGTCCTGTCAACTTGGGAAATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR GCA 90 bp | TGTCTTGATGGGGTTGTACATGTAGTTTGGTGGGGAGGCTGGAGATaGCAGATGATATATCTGGTCAACTTCTATGTAGAGCGGCTCGAC | + |
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Preference number: 1 (lower is better) Translates to: CLDGVVHVVWWGGWR*QMIYLVNFYVERLD Trigger: GTCGAGCCGCTCTACATAGAAGTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCCATCAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR CCA 90 bp | CTTCAGTGTCTTGATGGGGTTGTACATGTAGTTTGGTGGGGAGGCTaGAGATGCCAGATGATATATCTGGTCAACTTCTATGTAGAGCGG | + |
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Preference number: 1 (lower is better) Translates to: LQCLDGVVHVVWWGG*RCQMIYLVNFYVER Trigger: CCGCTCTACATAGAAGTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCCATCAAGACACTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR CCA 90 bp | GGAGCTACAAAGTCTAAGATCAAAGTGCTGACAGATTTTGGAGTGTaGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTCAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: GATKSKIKVLTDFGV*KGHVLVHRWCFLRV Trigger: TACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCAAAATCTGTCAGCACTTTGATCTTAGACTTTGTAGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR CCA 90 bp | TTAATTTGGGCTCCAAGCTCCAAATCCCCAGTGCTGAAGAGACACTaGGATTTGAGACTTCAGAACACTTCATCTTTGGGATTGAGGATG | + |
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Preference number: 1 (lower is better) Translates to: LIWAPSSKSPVLKRH*DLRLQNTSSLGLRM Trigger: CATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCTCTTCAGCACTGGGGATTTGGAGCTTGGAGCCCAAATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR CCA 90 bp | TGTATTAGTCTTCAGTGTCTTGATGGGGTTGTACATGTAGTTTGGTaGGGAGGCTGGAGATGCCAGATGATATATCTGGTCAACTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: CISLQCLDGVVHVVW*GGWRCQMIYLVNFY Trigger: ATAGAAGTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCCATCAAGACACTGAAGACTAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR CCA 90 bp | AATTGTATTAGTCTTCAGTGTCTTGATGGGGTTGTACATGTAGTTTaGTGGGGAGGCTGGAGATGCCAGATGATATATCTGGTCAACTTC | + |
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Preference number: 1 (lower is better) Translates to: NCISLQCLDGVVHVV*WGGWRCQMIYLVNF Trigger: GAAGTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCCATCAAGACACTGAAGACTAATACAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR TCA 90 bp | CCACCCCAATATGCAGCACAACACAGTAGTGATTTCAAATATCTTTaGTCAAGAACCAACAGGGATGTTTCAAAGTCAAGTTTGCAACTG | + |
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Preference number: 1 (lower is better) Translates to: PPQYAAQHSSDFKYL*SRTNRDVSKSSLQL Trigger: CAGTTGCAAACTTGACTTTGAAACATCCCTGTTGGTTCTTGATCAAAGATATTTGAAATCACTACTGTGTTGTGCTGCATATTGGGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076997.13 ENSMUST00000126008.8 |
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| 3UTR TCA 90 bp | TGGGCTATCCTTGGTGCTGAAAATAGTAAAGTCTCGTTTGCCTTCTaGTACTGTGGTATCAAATTTTCAGAATTACAGAATTCTCTAACA | + |
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Preference number: 1 (lower is better) Translates to: WAILGAENSKVSFAF*YCGIKFSELQNSLT Trigger: TGTTAGAGAATTCTGTAATTCTGAAAATTTGATACCACAGTATCAGAAGGCAAACGAGACTTTACTATTTTCAGCACCAAGGATAGCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR GCA 90 bp | GATACCAGAAGAGTGAATCTTATGAAAGAATTCCAGATATTAGTGTaGAATAAGCTAAGGGAATTCTGGGTCTTCAGACTTTTCGATACT | + |
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Preference number: 1 (lower is better) Translates to: DTRRVNLMKEFQILV*NKLREFWVFRLFDT Trigger: AGTATCGAAAAGTCTGAAGACCCAGAATTCCCTTAGCTTATTGCACACTAATATCTGGAATTCTTTCATAAGATTCACTCTTCTGGTATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR CAA 90 bp | GGCTCGGGGTCCTATGGGATTCACATGGCCCCAGTAGTCCTCACTTaGAGGGTGGACCTCAGGATCTCCATATACCTCGGAAGTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GSGSYGIHMAPVVLT*RVDLRISIYLGSGG Trigger: GCCTCCACTTCCGAGGTATATGGAGATCCTGAGGTCCACCCTCAAAGTGAGGACTACTGGGGCCATGTGAATCCCATAGGACCCCGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR CAA 90 bp | CAGCTGTGGCGCGTCCGGCCCTTCTTCACTCTGGCGGGCTTGGGTTaGGGGATGTACTGGTTATTAGCCTGGTACTCTAATTCCTTCCGG | + |
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Preference number: 2 (lower is better) Translates to: QLWRVRPFFTLAGLG*GMYWLLAWYSNSFR Trigger: CCGGAAGGAATTAGAGTACCAGGCTAATAACCAGTACATCCCCAAACCCAAGCCCGCCAGAGTGAAGAAGGGCCGGACGCGCCACAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR CAA 90 bp | CTAACTCAGCTGTGGCGCGTCCGGCCCTTCTTCACTCTGGCGGGCTaGGGTTTGGGGATGTACTGGTTATTAGCCTGGTACTCTAATTCC | + |
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Preference number: 2 (lower is better) Translates to: LTQLWRVRPFFTLAG*GLGMYWLLAWYSNS Trigger: GGAATTAGAGTACCAGGCTAATAACCAGTACATCCCCAAACCCAAGCCCGCCAGAGTGAAGAAGGGCCGGACGCGCCACAGCTGAGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR GCA 90 bp | TGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTCAGAGTAGCCCCAACAAACACTGGTaGCCCACCCACCCGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: WSVEGPRSGSQMVLSQSSPNKHW*PTHPTV Trigger: TACTGTCGGGTGGGTGGGGCACCAGTGTTTGTTGGG...GCTACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR CAA 90 bp | CTGACCACCCGCCCATCATTCATGTGCATTCTCGGCCCAAAGGTGTaGAAGATCCTTGCCACCCGTACTTCCACACCTTCCTGCTTCATG | + |
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Preference number: 2 (lower is better) Translates to: LTTRPSFMCILGPKV*KILATRTSTPSCFM Trigger: CATGAAGCAGGAAGGTGTGGAAGTACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGAGAATGCACATGAATGATGGGCGGGTGGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR CCA 90 bp | TACCAGGCCATTCACCAGATCACTTACGTACTGGAATGCCCGTGTCTGAGACCCCATATACCTCGGAAGTaGAGGCCAAGAGCAGACGGG | + |
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Preference number: 2 (lower is better) Translates to: YQAIHQITYVLECPCLRPHIPRK*RPRADG Trigger: CCCGTCTGCTCTTGGCCTCCACTTCCGAGGTATATG...GGGTCTCAGACACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR TCA 90 bp | TTCATCAGTGCTACCAGGCCATTCACCAGATCACTTACGTACTGGAATGCCCGTTCGGCCCAAAGGTGTTaGAGATCCTTGCCACCCGTA | + |
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Preference number: 2 (lower is better) Translates to: FISATRPFTRSLTYWNARSAQRC*RSLPPV Trigger: TACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGA...ACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTAGCACTGATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR GCA 90 bp | GGCTTTGTTCAATCCTTCCTCCAATGGAACCACAGGTTCCCACCCCAGCATCAGTGGGGAGGCTGGAGATaGCAGATGATATATCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: GFVQSFLQWNHRFPPQHQWGGWR*QMIYLV Trigger: GACCAGATATATCATCTGGCATCTCCAGCCTCCCCA...CTGATGCTGGGGTGGGAACCTGTGGTTCCATTGGAGGAAGGATTGAACAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR GCA 90 bp | TTCATCAGTGCTACCAGGCCATTCACCAGATCACTTACGTACTGGAATGCCCGTCGCCCATCATTCATGTaGATTCTCGGCCCAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FISATRPFTRSLTYWNARRPSFM*ILGPKV Trigger: CACCTTTGGGCCGAGAATGCACATGAATGATGGGCG...ACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTAGCACTGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCTCCCCTTGTAGTGCTTGTAAGATGAAGTTGCTGACCACCCGCCCATCATGTAGGCATAGCACATaGTCTCTGCAACACGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: SGSPCSACKMKLLTTRPSCRHST*SLQHVC Trigger: GCAAACGTGTTGCAGAGACCATGTGCTATGCCTACA...TGATGGGCGGGTGGTCAGCAACTTCATCTTACAAGCACTACAAGGGGAGCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR GCA 90 bp | CCATCATTCATGTGCATTCTCGGCCCAAAGGTGTTGAAGATCCTTGCCACCCGTATAGCACATGGTCTCTaGAACACGTTTGCCCTCATC | + |
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Preference number: 2 (lower is better) Translates to: PSFMCILGPKVLKILATRIAHGL*NTFALI Trigger: GATGAGGGCAAACGTGTTGCAGAGACCATGTGCTAT...ACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGAGAATGCACATGAATGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR CCA 90 bp | CATTGCTGTTCATCAGTGCTACCAGGCCATTCACCAGATCACTTACGTACTGGAGTACATGTAGTTTGGTaGGGAGGCTGGAGATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: HCCSSVLPGHSPDHLRTGVHVVW*GGWRCQ Trigger: CTGGCATCTCCAGCCTCCCCACCAAACTACATGTAC...TCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTAGCACTGATGAACAGCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR CCA 90 bp | GCTGGACCACAGCCGCCATCACCTACCTACCTCTCAGCTTCATTTCCCTCTCTGAAGCTAAGGGAATTCTaGGTCTTCAGACTTTTCGAT | + |
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Preference number: 2 (lower is better) Translates to: AGPQPPSPTYLSASFPSLKLREF*VFRLFD Trigger: ATCGAAAAGTCTGAAGACCCAGAATTCCCTTAGCTT...CAGAGAGGGAAATGAAGCTGAGAGGTAGGTAGGTGATGGCGGCTGTGGTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR TCA 90 bp | CCATCATTCATGTGCATTCTCGGCCCAAAGGTGTTGAAGATCCTTGCCACCCGTGCTGGAGATGCCAGATaGTATATCTGGTCAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: PSFMCILGPKVLKILATRAGDAR*YIWSTS Trigger: AGAAGTTGACCAGATATATCATCTGGCATCTCCAGC...ACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGAGAATGCACATGAATGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR-3UTR TCA 90 bp | TGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTCAGAGTAGCAGCCCAACATGGTTTTaGAAAATAGACCAAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: WSVEGPRSGSQMVLSQSSSPTWF*KIDQAQ Trigger: CTGAGCTTGGTCTATTTTTCAAAACCATGTTGGGCT...GCTACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTCAGAGTAGCCATGTGTGTATCATATaGACAGATTCAGCCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: WSVEGPRSGSQMVLSQSSHVCII*TDSAQR Trigger: TCTCTGGGCTGAATCTGTGCATATGATACACACATG...GCTACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAAAGTCTGCAGCTTTCAAGGGAGCGTTTAGGCACATCAGTGTCTTTAAATCACTCTGGCGGGCTTaGGTTTGGGGATGTACTGGT | + |
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Preference number: 2 (lower is better) Translates to: KAKSAAFKGAFRHISVFKSLWRA*VWGCTG Trigger: ACCAGTACATCCCCAAACCCAAGCCCGCCAGAGTGA...TTTAAAGACACTGATGTGCCTAAACGCTCCCTTGAAAGCTGCAGACTTTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR CAA 90 bp | TGGGCTCCAAGCTCCAAATCCCCAGTGCTGAAGAGACACTGGGATTaGAGACTTCAGAACACTTCATCTTTGGGATTGAGGATGCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: WAPSSKSPVLKRHWD*RLQNTSSLGLRMLK Trigger: TTTGAGCATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCTCTTCAGCACTGGGGATTTGGAGCTTGGAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCATAATCAAAGATAATGCAATGAAGCTCTACCTGACTAGAAGGCTGGGCGTGCAAGGCAAAGTCTaGAGCTTTCAAGGGAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: RVIIKDNAMKLYLTRRLGVQGKV*SFQGSV Trigger: AACGCTCCCTTGAAAGCTGCAGACTTTGCCTTGCAC...GCCCAGCCTTCTAGTCAGGTAGAGCTTCATTGCATTATCTTTGATTATGACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCATCAAAGGTACCAACCAACCACCAAGAAAGGCTAGGTCAACTAAGCAAGACCCAGGCTGAGTTCTaGAAACTTCACACCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: ISSKVPTNHQERLGQLSKTQAEF*KLHTTV Trigger: AACTGTGGTGTGAAGTTTTCAGAACTCAGCCTGGGT...CTTGCTTAGTTGACCTAGCCTTTCTTGGTGGTTGGTTGGTACCTTTGATGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGCAGAGGTTCAGTCTATTATCATCATGGAGGGAAGCATGGTAGCTTACAGGCCACCTGGTTTGTGCTaGTACAGGACACAAAACTTA | + |
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Preference number: 2 (lower is better) Translates to: VAEVQSIIIMEGSMVAYRPPGLC*YRTQNL Trigger: TAAGTTTTGTGTCCTGTAGCAGCACAAACCAGGTGG...CCTGTAAGCTACCATGCTTCCCTCCATGATGATAATAGACTGAACCTCTGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCATCAAAGGTACCAACCAACCACCAAGAAAGGCTAGGTCAACTAAGCAAGCTGGTTCACAGATGGTaGTTTCTCAGAGTAGCAATC | + |
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Preference number: 2 (lower is better) Translates to: ISSKVPTNHQERLGQLSKLVHRW*FLRVAI Trigger: GATTGCTACTCTGAGAAAGCACCATCTGTGAACCAG...CTTGCTTAGTTGACCTAGCCTTTCTTGGTGGTTGGTTGGTACCTTTGATGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCATAATCAAAGATAATGCAATGAAGCTCTACCTGACTAGAAGGCTGGGCGTGCTGAAGAGACACTaGGATTTGAGACTTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RVIIKDNAMKLYLTRRLGVLKRH*DLRLQN Trigger: GTTCTGAAGTCTCAAATCCCAGTGTCTCTTCAGCAC...GCCCAGCCTTCTAGTCAGGTAGAGCTTCATTGCATTATCTTTGATTATGACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCAAAGTCTGCAGCTTTCAAGGGAGCGTTTAGGCACATCAGTGTCTTTAAACCAGTTTGTTCTTCATaGCACCTGTTGAAGTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: KAKSAAFKGAFRHISVFKPVCSS*HLLKSL Trigger: TAAAGACTTCAACAGGTGTCATGAAGAACAAACTGG...TTTAAAGACACTGATGTGCCTAAACGCTCCCTTGAAAGCTGCAGACTTTGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076997.13 ENSMUST00000126008.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGACAGATTTAAAAGTGCAAGGCAAAGTCTGCAGCTTTCAAGGGAGCGTTTAGGTTTGGGGATGTACTaGTTATTAGCCTGGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: KDRFKSARQSLQLSRERLGLGMY*LLAWYS Trigger: AGAGTACCAGGCTAATAACCAGTACATCCCCAAACC...TAAACGCTCCCTTGAAAGCTGCAGACTTTGCCTTGCACTTTTAAATCTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
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| 3UTR CAA 90 bp | GTGCTGAAGAGACACTGGGATTTGAGACTTCAGAACACTTCATCTTaGGGATTGAGGATGCTCAAATTGCATAGTTCAGGAAAATATTCC | + |
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Preference number: 2 (lower is better) Translates to: VLKRHWDLRLQNTSS*GLRMLKLHSSGKYS Trigger: GGAATATTTTCCTGAACTATGCAATTTGAGCATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCTCTTCAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGTAAGTAAGATGCAAACAAGACATGTATGTGGGCTATCCTTGGTGCTGAAAAAACTTAACCCAGGCTaGGTTCTGAAAACTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: MVSKMQTRHVCGLSLVLKKLNPG*VLKTSH Trigger: GTGTGAAGTTTTCAGAACTCAGCCTGGGTTAAGTTT...TTTCAGCACCAAGGATAGCCCACATACATGTCTTGTTTGCATCTTACTTACCAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCATAATCAAAGATAATGCAATGAAGCTCTACCTGACTAGAAGGCTGGGCATAGACTGCATTTTGTaGATTGTGTTTTCCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: RVIIKDNAMKLYLTRRLGIDCIL*IVFSSH Trigger: ATGGGAGGAAAACACAATGCACAAAATGCAGTCTAT...GCCCAGCCTTCTAGTCAGGTAGAGCTTCATTGCATTATCTTTGATTATGACCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| 3UTR CAA 90 bp | AAGAGACACTGGGATTTGAGACTTCAGAACACTTCATCTTTGGGATaGAGGATGCTCAAATTGCATAGTTCAGGAAAATATTCCCGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KRHWDLRLQNTSSLG*RMLKLHSSGKYSRV Trigger: AACTCGGGAATATTTTCCTGAACTATGCAATTTGAGCATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 90 bp | ATCATGGTAAGTAAGATGCAAACAAGACATGTATGTGGGCTATCCTaGGTGCTGAAAATAGTAAAGTCTCGTTTGCCTTCTGATACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: IMVSKMQTRHVCGLS*VLKIVKSRLPSDTV Trigger: CACAGTATCAGAAGGCAAACGAGACTTTACTATTTTCAGCACCAAGGATAGCCCACATACATGTCTTGTTTGCATCTTACTTACCATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGACAGATTTAAAAGTGCAAGGCAAAGTCTGCAGCTTTCAAGGGAGCGTTTACCAGTTTGTTCTTCATaGCACCTGTTGAAGTCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: KDRFKSARQSLQLSRERLPVCSS*HLLKSL Trigger: TAAAGACTTCAACAGGTGTCATGAAGAACAAACTGG...TAAACGCTCCCTTGAAAGCTGCAGACTTTGCCTTGCACTTTTAAATCTGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076997.13 ENSMUST00000126008.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGCAAACAAGACATGTATGTGGGCTATCCTTGGTGCTGAAAATAGTAAAGCAGAGCATCTTTGCCTaGATTCTAGAGCCTTTCATA | + |
|
Preference number: 2 (lower is better) Translates to: KMQTRHVCGLSLVLKIVKQSIFA*ILEPFI Trigger: TATGAAAGGCTCTAGAATTCAGGCAAAGATGCTCTG...CTTTACTATTTTCAGCACCAAGGATAGCCCACATACATGTCTTGTTTGCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTACCTACCTCTCAGCTTCATTTCCCTCTCTGCCTAAGATACTATCATACTTAATTTGTAAGGGTTTCTaGTGTTACCATGTAAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: PTYLSASFPSLPKILSYLICKGF*CYHVRL Trigger: TAGCCTTACATGGTAACAGCAGAAACCCTTACAAAT...TAAGTATGATAGTATCTTAGGCAGAGAGGGAAATGAAGCTGAGAGGTAGGTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGAACCAACAGGGATGTTTCAAAGTCAAGTTTGCAACTGAAAACTAGACCTGATTGTGTGTTCTTCTaGATTTCCCAAGTTGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: SRTNRDVSKSSLQLKTRPDCVFF*ISQVDR Trigger: CCTGTCAACTTGGGAAATCCAGAAGAACACACAATC...AGGTCTAGTTTTCAGTTGCAAACTTGACTTTGAAACATCCCTGTTGGTTCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTAAGTAAGATGCAAACAAGACATGTATGTGGGCTATCCTTGGTGCTGAAACGCAATTCTTGTTTCTaGAGAATCTCTAAAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: MVSKMQTRHVCGLSLVLKRNSCF*RISKEP Trigger: AGGTTCTTTAGAGATTCTTCAGAAACAAGAATTGCG...TTTCAGCACCAAGGATAGCCCACATACATGTCTTGTTTGCATCTTACTTACCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTTCTGGGAGCTACAAAGTCTAAGATCAAAGTGCTGACAGATTTTGGAGTGTCTACACCAGAAAAATaGAAGTTTTTGTTCCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: IVLGATKSKIKVLTDFGVSTPEK*KFLFHL Trigger: CAGGTGGAACAAAAACTTCCATTTTTCTGGTGTAGA...CACTCCAAAATCTGTCAGCACTTTGATCTTAGACTTTGTAGCTCCCAGAACTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 90 bp | TTGAGACTTCAGAACACTTCATCTTTGGGATTGAGGATGCTCAAATaGCATAGTTCAGGAAAATATTCCCGAGTTAAACAAAATCAATCC | + |
|
Preference number: 2 (lower is better) Translates to: LRLQNTSSLGLRMLK*HSSGKYSRVKQNQS Trigger: GGATTGATTTTGTTTAACTCGGGAATATTTTCCTGAACTATGCAATTTGAGCATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 90 bp | CATGTATGTGGGCTATCCTTGGTGCTGAAAATAGTAAAGTCTCGTTaGCCTTCTGATACTGTGGTATCAAATTTTCAGAATTACAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: HVCGLSLVLKIVKSR*PSDTVVSNFQNYRI Trigger: AATTCTGTAATTCTGAAAATTTGATACCACAGTATCAGAAGGCAAACGAGACTTTACTATTTTCAGCACCAAGGATAGCCCACATACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CCA 72 bp | GAGGGTGGACCTCAGGATCTCCATATACCTCGGAAGTaGAGGCCAAGAGCAGACGGGCACCCACGCGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: EGGPQDLHIPRK*RPRADGHPRAL Trigger: CAAAGCGCGTGGGTGCCCGTCTGCTCTTGGCCTCCACTTCCGAGGTATATGGAGATCCTGAGGTCCACCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR-3UTR CAA 90 bp | TACCAGGCCATTCACCAGATCACTTACGTACTGGAATGCCCGTGTCTGAGACCCCTCGGCCCAAAGGTGTaGAAGATCCTTGCCACCCGT | + |
|
Preference number: 3 (lower is better) Translates to: YQAIHQITYVLECPCLRPLGPKV*KILATR Trigger: ACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGAG...GGGTCTCAGACACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR CCA 72 bp | CACGTTTGCCCTCATCATAGCAGGCTCGGGGTCCTATaGGATTCACATGGCCCCAGTAGTCCTCACTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: HVCPHHSRLGVL*DSHGPSSPHFE Trigger: CTCAAAGTGAGGACTACTGGGGCCATGTGAATCCCATAGGACCCCGAGCCTGCTATGATGAGGGCAAACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR GCA 72 bp | ACCTTCCTGCTTCATGTAGGCATAGCACATGGTCTCTaGAACACGTTTGCCCTCATCATAGCAGGCTCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TFLLHVGIAHGL*NTFALIIAGSG Trigger: CCCCGAGCCTGCTATGATGAGGGCAAACGTGTTGCAGAGACCATGTGCTATGCCTACATGAAGCAGGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR GCA 72 bp | TCATGTAGGCATAGCACATGGTCTCTGCAACACGTTTaGCCTCATCATAGCAGGCTCGGGGTCCTATGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SCRHSTWSLQHV*PHHSRLGVLWD Trigger: ATCCCATAGGACCCCGAGCCTGCTATGATGAGGGCAAACGTGTTGCAGAGACCATGTGCTATGCCTACATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR GCA 72 bp | TACCAGGCCATTCACCAGATCACTTACGTACTGGAATaGCCGTGTCTGAGACCCAGAGCCATAGACTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: YQAIHQITYVLE*PCLRPRAIDCE Trigger: CTCACAGTCTATGGCTCTGGGTCTCAGACACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTCAGAGTAGCCACACCACAGTTAATTaGGGCTCCAAGCTCCAAATC | + |
|
Preference number: 3 (lower is better) Translates to: WSVEGPRSGSQMVLSQSSHTTVN*GSKLQI Trigger: GATTTGGAGCTTGGAGCCCAAATTAACTGTGGTGTG...GCTACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR GCA 72 bp | CATGTGCATTCTCGGCCCAAAGGTGTTGAAGATCCTTaGCACCCGTACTTCCACACCTTCCTGCTTCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: HVHSRPKGVEDP*HPYFHTFLLHV Trigger: TACATGAAGCAGGAAGGTGTGGAAGTACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGAGAATGCACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR GCA 72 bp | AAGATGAAGTTGCTGACCACCCGCCCATCATTCATGTaGATTCTCGGCCCAAAGGTGTTGAAGATCCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KMKLLTTRPSFM*ILGPKVLKILA Trigger: GGCAAGGATCTTCAACACCTTTGGGCCGAGAATGCACATGAATGATGGGCGGGTGGTCAGCAACTTCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR CCA 72 bp | CTTCCACACCTTCCTGCTTCATGTAGGCATAGCACATaGTCTCTGCAACACGTTTGCCCTCATCATAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPHLPASCRHST*SLQHVCPHHSR Trigger: CCTGCTATGATGAGGGCAAACGTGTTGCAGAGACCATGTGCTATGCCTACATGAAGCAGGAAGGTGTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGACCACAGCCGCCATCACCTACCTACCTCTCAGCTTCATTTCCCTCTCTGGATGCATCTAGGCTGTaGTACATAACAAAGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: AGPQPPSPTYLSASFPSLDASRL*YITKTD Trigger: ATCTGTCTTTGTTATGTACAACAGCCTAGATGCATC...CAGAGAGGGAAATGAAGCTGAGAGGTAGGTAGGTGATGGCGGCTGTGGTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR GCA 72 bp | GGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTaGTTTCTCAGAGTAGCAATCAATAGAAGGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GVWKGHVLVHRW*FLRVAINRRSK Trigger: CTTGCTCCTTCTATTGATTGCTACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CCA 72 bp | GAAGTAGTGGATGGCTTTGTTCAATCCTTCCTCCAATaGAACCACAGGTTCCCACCCCAGCATCAGTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: EVVDGFVQSFLQ*NHRFPPQHQFC Trigger: GCAAAACTGATGCTGGGGTGGGAACCTGTGGTTCCATTGGAGGAAGGATTGAACAAAGCCATCCACTACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR GCA 72 bp | CAAGTTGACAGGACTGCTGACATTGCTGTTCATCAGTaGTACCAGGCCATTCACCAGATCACTTACGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: QVDRTADIAVHQ*YQAIHQITYVL Trigger: CAGTACGTAAGTGATCTGGTGAATGGCCTGGTAGCACTGATGAACAGCAATGTCAGCAGTCCTGTCAACTTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR GCA 72 bp | AAGCAAGAGCCAGGAACTACAGAAAGGGTCCCCCTCTaGCTTCATCAGTTTGTACAGATACCTCATCTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: KQEPGTTERVPL*LHQFVQIPHLS Trigger: CGAAAGATGAGGTATCTGTACAAACTGATGAAGGCAGAGGGGGACCCTTTCTGTAGTTCCTGGCTCTTGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR GCA 72 bp | AAGTTGCCCCAAACAGCTCAGGACCATTGGGATGGCTaGCATAACAAAAGAATGAGCTATGGGTTGGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KLPQTAQDHWDG*HNKRMSYGLVV Trigger: GACAACCAACCCATAGCTCATTCTTTTGTTATGGCAGCCATCCCAATGGTCCTGAGCTGTTTGGGGCAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136704.2 |
||
| 3UTR CCA 72 bp | CTTCAGTGTCTTGATGGGGTTGTACATGTAGTTTGGTaGGGAGGCTGGAGATGCCAGATGATATATCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LQCLDGVVHVVW*GGWRCQMIYLV Trigger: GACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCCATCAAGACACTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR CCA 72 bp | GCTGGAAGAGCCAAGTTCCACATCATGACACCTCCTTaGAGCACCATCTTAAGAAAAAGTTTCCACCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AGRAKFHIMTPP*STILRKSFHPL Trigger: GAGAGGGTGGAAACTTTTTCTTAAGATGGTGCTCCAAGGAGGTGTCATGATGTGGAACTTGGCTCTTCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR GCA 72 bp | GGGGTTGTACATGTAGTTTGGTGGGGAGGCTGGAGATaGCAGATGATATATCTGGTCAACTTCTATGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GVVHVVWWGGWR*QMIYLVNFYVE Trigger: CTCTACATAGAAGTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR CCA 72 bp | AGGCTGAGTTCTGAAAACTTCACACCACAGTTAATTTaGGCTCCAAGCTCCAAATCCCCAGTGCTGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RLSSENFTPQLI*APSSKSPVLKR Trigger: TCTCTTCAGCACTGGGGATTTGGAGCTTGGAGCCCAAATTAACTGTGGTGTGAAGTTTTCAGAACTCAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGACAGATTTAAAAGTGCAAGGCAAAGTCTGCAGCTTTCAAGGGAGCGTTTACTGGCGGGCTTGGGTTaGGGGATGTACTGGTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: KDRFKSARQSLQLSRERLLAGLG*GMYWLL Trigger: TAATAACCAGTACATCCCCAAACCCAAGCCCGCCAG...TAAACGCTCCCTTGAAAGCTGCAGACTTTGCCTTGCACTTTTAAATCTGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGGGGAGGCTGGAGATGCCAGATGATATATCTGGTCAACAAAATCCTTTTCTCATGTTAACAAAGTaGCCCCAAACAGCTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LVGRLEMPDDISGQQNPFLMLTK*PQTAQD Trigger: GTCCTGAGCTGTTTGGGGCAACTTTGTTAACATGAG...AAAAGGATTTTGTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000136704.2 |
||
| 3UTR TCA 72 bp | TGCTACAGGACACAAAACTTAACCCAGGCTGAGTTCTaGAAACTTCACACCACAGTTAATTTGGGCTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CYRTQNLTQAEF*KLHTTVNLGSK Trigger: CTTGGAGCCCAAATTAACTGTGGTGTGAAGTTTTCAGAACTCAGCCTGGGTTAAGTTTTGTGTCCTGTAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCTACCTCTCAGCTTCATTTCCCTCTCTGCCTAAGATACTATCATACTTACCACACCTTTATTCCTaGGGCATTTGTAAGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PTYLSASFPSLPKILSYLPHLYS*GICKGF Trigger: GAAACCCTTACAAATGCCCAAGGAATAAAGGTGTGG...TAAGTATGATAGTATCTTAGGCAGAGAGGGAAATGAAGCTGAGAGGTAGGTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR TCA 72 bp | AGACACATGGCAAAGTTAACTCGCAATTCTTGTTTCTaGAGAATCTCTAAAGAACCTCCAAACTCCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: RHMAKLTRNSCF*RISKEPPNSLQ Trigger: CTGTAGGGAGTTTGGAGGTTCTTTAGAGATTCTTCAGAAACAAGAATTGCGAGTTAACTTTGCCATGTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR-3UTR CAA 90 bp | TACCTCTCAGCTTCATTTCCCTCTCTGCCTAAGATACTATCATACTTAATTCAAACTTCATCTTTGGGATaGAGGATGCTCAAATTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YLSASFPSLPKILSYLIQTSSLG*RMLKLH Trigger: ATGCAATTTGAGCATCCTCAATCCCAAAGATGAAGT...TTGAATTAAGTATGATAGTATCTTAGGCAGAGAGGGAAATGAAGCTGAGAGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCTGTATTTTCCTTCCTATAATGTAATTGTAGATGAACATGGCCCCATCTCTAAGAGACACTGGGATTaGAGACTTCAGAACACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NLYFPSYNVIVDEHGPISKRHWD*RLQNTS Trigger: TGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCTCTT...AGAGATGGGGCCATGTTCATCTACAATTACATTATAGGAAGGAAAATACAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGCAAACAAGACATGTATGTGGGCTATCCTTGGTGCTGAAAATAGTAAAGACTAAGCAAGTTATTTaGACAGACACATGGCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KMQTRHVCGLSLVLKIVKTKQVI*TDTWQS Trigger: ACTTTGCCATGTGTCTGTCAAAATAACTTGCTTAGT...CTTTACTATTTTCAGCACCAAGGATAGCCCACATACATGTCTTGTTTGCATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR GCA 72 bp | TGTTACCATGTAAGGCTAATCTGGTTGGAGATAGACTaGATTTTGTGCATTGTGTTTTCCTCCCATTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: CYHVRLIWLEID*ILCIVFSSHLF Trigger: AAATAAATGGGAGGAAAACACAATGCACAAAATGCAGTCTATCTCCAACCAGATTAGCCTTACATGGTAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CCA 72 bp | TTCCAGATATTAGTGTGCAATAAGCTAAGGGAATTCTaGGTCTTCAGACTTTTCGATACTCCTAATTATACG | + |
|
Preference number: 3 (lower is better) Translates to: FQILVCNKLREF*VFRLFDTPNYT Trigger: CGTATAATTAGGAGTATCGAAAAGTCTGAAGACCCAGAATTCCCTTAGCTTATTGCACACTAATATCTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR GCA 72 bp | AGAGTGAATCTTATGAAAGAATTCCAGATATTAGTGTaGAATAAGCTAAGGGAATTCTGGGTCTTCAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: RVNLMKEFQILV*NKLREFWVFRL Trigger: AAGTCTGAAGACCCAGAATTCCCTTAGCTTATTGCACACTAATATCTGGAATTCTTTCATAAGATTCACTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR TCA 72 bp | AGGACGTTATACACATCTGTTTCTCTTCTACTACTTTaGAAATACTCTATGGATACCAGAAGAGTGAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: RTLYTSVSLLLL*KYSMDTRRVNL Trigger: AAGATTCACTCTTCTGGTATCCATAGAGTATTTTCAAAGTAGTAGAAGAGAAACAGATGTGTATAACGTCCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | CTGTGGCGCGTCCGGCCCTTCTTCACTCTGGCGGGCTaGGGTTTGGGGATGTACTGGTTATTAGCCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LWRVRPFFTLAG*GLGMYWLLAWY Trigger: GTACCAGGCTAATAACCAGTACATCCCCAAACCCAAGCCCGCCAGAGTGAAGAAGGGCCGGACGCGCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| 3UTR CAA 72 bp | CGCGTCCGGCCCTTCTTCACTCTGGCGGGCTTGGGTTaGGGGATGTACTGGTTATTAGCCTGGTACTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RVRPFFTLAGLG*GMYWLLAWYSN Trigger: ATTAGAGTACCAGGCTAATAACCAGTACATCCCCAAACCCAAGCCCGCCAGAGTGAAGAAGGGCCGGACGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| CDS-3UTR TCA 90 bp | GTGCTACCAGGCCATTCACCAGATCACTTACGTACTGGAATGCCCGTGTCTGAGTCATCCTCCTGCGGTTaGCTGAAGAGACAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLPGHSPDHLRTGMPVSESSSCG*LKRQGA Trigger: TGCGCCTTGTCTCTTCAGTCAACCGCAGGAGGATGA...CTCAGACACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| CDS-3UTR TCA 90 bp | TGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTCAGAGTAGCTCATCCTCCTGCGGTTaGCTGAAGAGACAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSVEGPRSGSQMVLSQSSSSSCG*LKRQGA Trigger: TGCGCCTTGTCTCTTCAGTCAACCGCAGGAGGATGA...GCTACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCCGCCATCACCTACCTACCTCTCAGCTTCATTTCCCTCTCTGCCTAAGATCACTCTGGCGGGCTTaGGTTTGGGGATGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSRHHLPTSQLHFPLCLRSLWRA*VWGCTG Trigger: ACCAGTACATCCCCAAACCCAAGCCCGCCAGAGTGA...TCTTAGGCAGAGAGGGAAATGAAGCTGAGAGGTAGGTAGGTGATGGCGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR TCA 90 bp | TTCATCAGTGCTACCAGGCCATTCACCAGATCACTTACGTACTGGAATGCCCGTCCTCCTGCGGTTGACTaGAGAGACAAGGCGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FISATRPFTRSLTYWNARPPAVD*RDKAQQ Trigger: CTGTTGCGCCTTGTCTCTTCAGTCAACCGCAGGAGG...ACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTAGCACTGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| CDS-3UTR CCA 90 bp | AGCACATGGTCTCTGCAACACGTTTGCCCTCATCATAGCAGGCTCGGGGTCCTAAGCTCGAAGTTCTCATaGCCAATCCAGTGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: STWSLQHVCPHHSRLGVLSSKFS*PIQCST Trigger: TGTGGAACACTGGATTGGCCATGAGAACTTCGAGCT...TAGGACCCCGAGCCTGCTATGATGAGGGCAAACGTGTTGCAGAGACCATGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| CDS-3UTR TCA 90 bp | CACAGCCGCCATCACCTACCTACCTCTCAGCTTCATTTCCCTCTCTGCCTAAGACATGGCCATCCATCATaGGTTTGTCAGTTAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSRHHLPTSQLHFPLCLRHGHPS*VCQLDG Trigger: CCCATCTAACTGACAAACTCATGATGGATGGCCATG...TCTTAGGCAGAGAGGGAAATGAAGCTGAGAGGTAGGTAGGTGATGGCGGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR TCA 90 bp | CTGACAGATTTTGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTTTCTCTTCCTGCCTGTaGAGAAGTTGTCCACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LTDFGVWKGHVLVHRWCFFSSCL*RSCPPR Trigger: CCGTGGTGGACAACTTCTTCACAGGCAGGAAGAGAA...AAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCAAAATCTGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGTTTGGTGGGGAGGCTGGAGATGCCAGATGATATATCTGGTCAACAAAATCCTCCTGCGGTTGACTaGAGAGACAAGGCGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLVGRLEMPDDISGQQNPPAVD*RDKAQQ Trigger: CTGTTGCGCCTTGTCTCTTCAGTCAACCGCAGGAGG...ATTTTGTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136704.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTCAGAGTAGCTGGTTTTCTTTTCTGTaGGTCATCCTGGGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSVEGPRSGSQMVLSQSSWFSFL*VILGFR Trigger: TCTGAAGCCCAGGATGACCCACAGAAAAGAAAACCA...GCTACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAGTCTGCAGCTTTCAAGGGAGCGTTTAGGCACATCAGTGTCTTTAAACATATACCTCGGAAGTaGAGGCCAAGAGCAGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAKSAAFKGAFRHISVFKHIPRK*RPRADG Trigger: CCCGTCTGCTCTTGGCCTCCACTTCCGAGGTATATG...TTTAAAGACACTGATGTGCCTAAACGCTCCCTTGAAAGCTGCAGACTTTGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | TCTCCATTTTCCTGGATAGACCTCATGTTAACAAAGTaGCCCCAAACAGCTCAGGACCATTGGGATGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPFSWIDLMLTK*PQTAQDHWDGC Trigger: GCAGCCATCCCAATGGTCCTGAGCTGTTTGGGGCAACTTTGTTAACATGAGGTCTATCCAGGAAAATGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136704.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTAAGTAAGATGCAAACAAGACATGTATGTGGGCTATCCTTGGTGCTGAAACCTCCTGCGGTTGACTaGAGAGACAAGGCGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: MVSKMQTRHVCGLSLVLKPPAVD*RDKAQQ Trigger: CTGTTGCGCCTTGTCTCTTCAGTCAACCGCAGGAGG...TTTCAGCACCAAGGATAGCCCACATACATGTCTTGTTTGCATCTTACTTACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR GCA 90 bp | AACTACAGAAAGGGTCCCCCTCTGCCTTCATCAGTTTGTACAGATACCTCATCTTGGGGAGGCTGGAGATaGCAGATGATATATCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NYRKGPPLPSSVCTDTSSWGGWR*QMIYLV Trigger: GACCAGATATATCATCTGGCATCTCCAGCCTCCCCA...AGATGAGGTATCTGTACAAACTGATGAAGGCAGAGGGGGACCCTTTCTGTAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTTCTGGGAGCTACAAAGTCTAAGATCAAAGTGCTGACAGATTTTGGAGTGTCGGCCCAAAGGTGTTaGAGATCCTTGCCACCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: IVLGATKSKIKVLTDFGVSAQRC*RSLPPV Trigger: TACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGA...CACTCCAAAATCTGTCAGCACTTTGATCTTAGACTTTGTAGCTCCCAGAACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR GCA 90 bp | CTACACCAGAAAAATGGAAGTTTTTGTTCCACCTGGTTTGTGCTGCTACAGGACGGAGCCCACAAAGCCTaGACCTCCAGTGATCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHQKNGSFCSTWFVLLQDGAHKA*TSSDQN Trigger: ATTTTGATCACTGGAGGTGCAGGCTTTGTGGGCTCC...GTCCTGTAGCAGCACAAACCAGGTGGAACAAAAACTTCCATTTTTCTGGTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | AGCTCCAAATCCCCAGTGCTGAAGAGACACTGGGATTaGAGACTTCAGAACACTTCATCTTTGGGATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKSPVLKRHWD*RLQNTSSLGLR Trigger: CCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCTCTTCAGCACTGGGGATTTGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGACACTGGGATTTGAGACTTCAGAACACTTCATCTTTGGGATTGAGGATGACCACGGTCACCTCATaGCCATCCATCATGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRHWDLRLQNTSSLGLRMTTVTS*PSIMSL Trigger: CAAACTCATGATGGATGGCCATGAGGTGACCGTGGT...CATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR GCA 90 bp | TCTACACCAGAAAAATGGAAGTTTTTGTTCCACCTGGTTTGTGCTGCTACAGGAATAGCACATGGTCTCTaGAACACGTTTGCCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: STPEKWKFLFHLVCAATGIAHGL*NTFALI Trigger: GATGAGGGCAAACGTGTTGCAGAGACCATGTGCTAT...TCCTGTAGCAGCACAAACCAGGTGGAACAAAAACTTCCATTTTTCTGGTGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | TCTACACCAGAAAAATGGAAGTTTTTGTTCCACCTGGTTTGTGCTGCTACAGGATGTAGGCATAGCACATaGTCTCTGCAACACGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: STPEKWKFLFHLVCAATGCRHST*SLQHVC Trigger: GCAAACGTGTTGCAGAGACCATGTGCTATGCCTACA...TCCTGTAGCAGCACAAACCAGGTGGAACAAAAACTTCCATTTTTCTGGTGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | GAACTACAGAAAGGGTCCCCCTCTGCCTTCATCAGTTaGTACAGATACCTCATCTTTCGTAACACTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELQKGSPSAFIS*YRYLIFRNTIA Trigger: TGCAATAGTGTTACGAAAGATGAGGTATCTGTACAAACTGATGAAGGCAGAGGGGGACCCTTTCTGTAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTTTGTACAGATACCTCATCTTTCGTAACACTATTGCACCAAAGAGTAGGTAGCCTGCACCTCCAGTaGTCAAAATCCTTTTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVCTDTSSFVTLLHQRVGSLHLQ*SKSFSG Trigger: ACCGGAAAAGGATTTTGATCACTGGAGGTGCAGGCT...ACCTACTCTTTGGTGCAATAGTGTTACGAAAGATGAGGTATCTGTACAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGACACTGGGATTTGAGACTTCAGAACACTTCATCTTTGGGATTGAGGATGGCTGGAGATGCCAGATaGTATATCTGGTCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRHWDLRLQNTSSLGLRMAGDAR*YIWSTS Trigger: AGAAGTTGACCAGATATATCATCTGGCATCTCCAGC...CATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR GCA 90 bp | TTCATCAGTGCTACCAGGCCATTCACCAGATCACTTACGTACTGGAATGCCCGTCAATCTCTTCAATCTTaGTTTCGATCTTTAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FISATRPFTRSLTYWNARQSLQS*FRSLVL Trigger: GAGAACTAAAGATCGAAAGCAAGATTGAAGAGATTG...ACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTAGCACTGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| CDS-3UTR GCA 90 bp | TCAAGAACCAACAGGGATGTTTCAAAGTCAAGTTTGCAACTGAAAACTAGACCTTCTCTGCAACACGTTTaGCCTCATCATAGCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRTNRDVSKSSLQLKTRPSLQHV*PHHSRL Trigger: GAGCCTGCTATGATGAGGGCAAACGTGTTGCAGAGA...AGGTCTAGTTTTCAGTTGCAAACTTGACTTTGAAACATCCCTGTTGGTTCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTTTGTACAGATACCTCATCTTTCGTAACACTATTGCACCAAAGAGTAGGTACTTACGTACTGGAATaGCCGTGTCTGAGACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVCTDTSSFVTLLHQRVGTYVLE*PCLRPR Trigger: TCTGGGTCTCAGACACGGGCATTCCAGTACGTAAGT...ACCTACTCTTTGGTGCAATAGTGTTACGAAAGATGAGGTATCTGTACAAACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR GCA 90 bp | AATCTGTATTTTCCTTCCTATAATGTAATTGTAGATGAACATGGCCCCATCTCTCGCCCATCATTCATGTaGATTCTCGGCCCAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLYFPSYNVIVDEHGPISRPSFM*ILGPKV Trigger: CACCTTTGGGCCGAGAATGCACATGAATGATGGGCG...AGAGATGGGGCCATGTTCATCTACAATTACATTATAGGAAGGAAAATACAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGAGAGCACACAGATGGTTCTAACAGTTACATATCAAGTTAAATATGGTAGCTCGAAGTTCTCATaGCCAATCCAGTGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPESTQMVLTVTYQVKYGSSKFS*PIQCST Trigger: TGTGGAACACTGGATTGGCCATGAGAACTTCGAGCT...ACCATATTTAACTTGATATGTAACTGTTAGAACCATCTGTGTGCTCTCTGGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | CTAATTATACGTAAAGCTCTGAGCTATTTCTGTCCACATTTTTCTTTGGTCCAAGTACATGTAGTTTGGTaGGGAGGCTGGAGATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKALSYFCPHFSLVQVHVVW*GGWRCQ Trigger: CTGGCATCTCCAGCCTCCCCACCAAACTACATGTAC...TTGGACCAAAGAAAAATGTGGACAGAAATAGCTCAGAGCTTTACGTATAATTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGACACTGGGATTTGAGACTTCAGAACACTTCATCTTTGGGATTGAGGATGGATTGTGTGTTCTTCTaGATTTCCCAAGTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRHWDLRLQNTSSLGLRMDCVFF*ISQVDR Trigger: CCTGTCAACTTGGGAAATCCAGAAGAACACACAATC...CATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | AGACACTGGGATTTGAGACTTCAGAACACTTCATCTTaGGGATTGAGGATGCTCAAATTGCATAGTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RHWDLRLQNTSS*GLRMLKLHSSG Trigger: TCCTGAACTATGCAATTTGAGCATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCAGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | CTAATTATACGTAAAGCTCTGAGCTATTTCTGTCCACATTTTTCTTTGGTCCAAAGTTTGTCAGTTAGATaGGAGCCCACAAAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKALSYFCPHFSLVQSLSVR*EPTKPA Trigger: TGCAGGCTTTGTGGGCTCCCATCTAACTGACAAACT...TTGGACCAAAGAAAAATGTGGACAGAAATAGCTCAGAGCTTTACGTATAATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | AGTAAGATGCAAACAAGACATGTATGTGGGCTATCCTaGGTGCTGAAAATAGTAAAGTCTCGTTTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKMQTRHVCGLS*VLKIVKSRLPS Trigger: AGAAGGCAAACGAGACTTTACTATTTTCAGCACCAAGGATAGCCCACATACATGTCTTGTTTGCATCTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | ACTCTTAGAAAACATTTAATAGGGGCTGGCTTACAGTaGCAGAGGTTCAGTCTATTATCATCATGGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLRKHLIGAGLQ*QRFSLLSSWRE Trigger: TTCCCTCCATGATGATAATAGACTGAACCTCTGCAACTGTAAGCCAGCCCCTATTAAATGTTTTCTAAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR GCA 90 bp | CCTACCTACCTCTCAGCTTCATTTCCCTCTCTGCCTAAGATACTATCATACTTACAATCTCTTCAATCTTaGTTTCGATCTTTAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTYLSASFPSLPKILSYLQSLQS*FRSLVL Trigger: GAGAACTAAAGATCGAAAGCAAGATTGAAGAGATTG...TAAGTATGATAGTATCTTAGGCAGAGAGGGAAATGAAGCTGAGAGGTAGGTAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | AAAGACAGATTTAAAAGTGCAAGGCAAAGTCTGCAGCTTTCAAGGGAGCGTTTAAGTTCTCCATTTTCCTaGATAGACCTCATGTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDRFKSARQSLQLSRERLSSPFS*IDLMLT Trigger: TGTTAACATGAGGTCTATCCAGGAAAATGGAGAACT...TAAACGCTCCCTTGAAAGCTGCAGACTTTGCCTTGCACTTTTAAATCTGTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076997.13 ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | CTAATTATACGTAAAGCTCTGAGCTATTTCTGTCCACATTTTTCTTTGGTCCAATCCGGAAGTAGTGGATaGCTTTGTTCAATCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKALSYFCPHFSLVQSGSSG*LCSILP Trigger: AGGAAGGATTGAACAAAGCCATCCACTACTTCCGGA...TTGGACCAAAGAAAAATGTGGACAGAAATAGCTCAGAGCTTTACGTATAATTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | CTAATTATACGTAAAGCTCTGAGCTATTTCTGTCCACATTTTTCTTTGGTCCAAGGTTTGGGGATGTACTaGTTATTAGCCTGGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKALSYFCPHFSLVQGLGMY*LLAWYS Trigger: AGAGTACCAGGCTAATAACCAGTACATCCCCAAACC...TTGGACCAAAGAAAAATGTGGACAGAAATAGCTCAGAGCTTTACGTATAATTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTTTGTACAGATACCTCATCTTTCGTAACACTATTGCACCAAAGAGTAGGTAGTTCTCCATTTTCCTaGATAGACCTCATGTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SVCTDTSSFVTLLHQRVGSSPFS*IDLMLT Trigger: TGTTAACATGAGGTCTATCCAGGAAAATGGAGAACT...ACCTACTCTTTGGTGCAATAGTGTTACGAAAGATGAGGTATCTGTACAAACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | CAGAACACTTCATCTTTGGGATTGAGGATGCTCAAATaGCATAGTTCAGGAAAATATTCCCGAGTTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QNTSSLGLRMLK*HSSGKYSRVKQ Trigger: TTGTTTAACTCGGGAATATTTTCCTGAACTATGCAATTTGAGCATCCTCAATCCCAAAGATGAAGTGTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | TGGGATTTGAGACTTCAGAACACTTCATCTTTGGGATaGAGGATGCTCAAATTGCATAGTTCAGGAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: WDLRLQNTSSLG*RMLKLHSSGKY Trigger: ATATTTTCCTGAACTATGCAATTTGAGCATCCTCAATCCCAAAGATGAAGTGTTCTGAAGTCTCAAATCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| 3UTR CAA 72 bp | GAGGACGTTATACACATCTGTTTCTCTTCTACTACTTaGAAAATACTCTATGGATACCAGAAGAGTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: EDVIHICFSSTT*KILYGYQKSES Trigger: AGATTCACTCTTCTGGTATCCATAGAGTATTTTCAAAGTAGTAGAAGAGAAACAGATGTGTATAACGTCCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTCAGAGTAGCTTCATCCTCCTGCGGTaGACTGAAGAGACAAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: WSVEGPRSGSQMVLSQSSFILLR*TEETRR Trigger: GCGCCTTGTCTCTTCAGTCAACCGCAGGAGGATGAA...GCTACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGACCACAGCCGCCATCACCTACCTACCTCTCAGCTTCATTTCCCTCTCTGCCATCCATCATGAGTTaGTCAGTTAGATGGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGPQPPSPTYLSASFPSLPSIMS*SVRWEP Trigger: GGGCTCCCATCTAACTGACAAACTCATGATGGATGG...CAGAGAGGGAAATGAAGCTGAGAGGTAGGTAGGTGATGGCGGCTGTGGTCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS GCA 90 bp | TGTCTTGATGGGGTTGTACATGTAGTTTGGTGGGGAGGCTGGAGATaGCAGATGATATATCTGGTCAAAGGCGGCGTAGGCGAACAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CLDGVVHVVWWGGWR*QMIYLVKGGVGEQR Trigger: GCGCTGTTCGCCTACGCCGCCTTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCCATCAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153317.6 |
||
| CDS-3UTR CAA 90 bp | TACCAGGCCATTCACCAGATCACTTACGTACTGGAATGCCCGTGTCTGAGACCCCTCATGTTAACAAAGTaGCCCCAAACAGAGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YQAIHQITYVLECPCLRPLMLTK*PQTEAA Trigger: CGCCGCCTCTGTTTGGGGCAACTTTGTTAACATGAG...GGGTCTCAGACACGGGCATTCCAGTACGTAAGTGATCTGGTGAATGGCCTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076997.13 |
||
| CDS-3UTR CAA 90 bp | TGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTCAGAGTAGCCTGGCGGGCTTGGGTTaGGGGATGTACTGGTTATTA | + |
|
Preference number: 5 (lower is better) Translates to: WSVEGPRSGSQMVLSQSSLAGLG*GMYWLL Trigger: TAATAACCAGTACATCCCCAAACCCAAGCCCGCCAG...GCTACTCTGAGAAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS-3UTR CAA 90 bp | CTGACAGATTTTGGAGTGTGGAAGGGCCACGTTCTGGTTCACAGATGGTGCTTTCTGCCTGTGAAGAAGTaGTCCACCACGGTCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTDFGVWKGHVLVHRWCFLPVKK*STTVTS Trigger: TGAGGTGACCGTGGTGGACAACTTCTTCACAGGCAG...AAAGCACCATCTGTGAACCAGAACGTGGCCCTTCCACACTCCAAAATCTGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS CCA 90 bp | CTTCAGTGTCTTGATGGGGTTGTACATGTAGTTTGGTGGGGAGGCTaGAGATGCCAGATGATATATCTGGTCAAAGGCGGCGTAGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQCLDGVVHVVWWGG*RCQMIYLVKGGVGE Trigger: TTCGCCTACGCCGCCTTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCCATCAAGACACTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153317.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGACCACAGCCGCCATCACCTACCTACCTCTCAGCTTCATTTCCCTCTCTGGAGCAAATTCCAGGATaGTGTGTTCTTCTGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGPQPPSPTYLSASFPSLEQIPG*CVLLDF Trigger: GAAATCCAGAAGAACACACAATCCTGGAATTTGCTC...CAGAGAGGGAAATGAAGCTGAGAGGTAGGTAGGTGATGGCGGCTGTGGTCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
||
| CDS CCA 90 bp | ACCACGGTCACCTCATGGCCATCCATCATGAGTTTGTCAGTTAGATaGGAGCCCACAAAGCCTGCACCTCCAGTGATCAAAATCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TTVTSWPSIMSLSVR*EPTKPAPPVIKILF Trigger: GAAAAGGATTTTGATCACTGGAGGTGCAGGCTTTGTGGGCTCCCATCTAACTGACAAACTCATGATGGATGGCCATGAGGTGACCGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126008.8 ENSMUST00000139451.8 |
||
| CDS CCA 90 bp | TTTCTCTTCCTGCCTGTGAAGAAGTTGTCCACCACGGTCACCTCATaGCCATCCATCATGAGTTTGTCAGTTAGATGGGAGCCCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLFLPVKKLSTTVTS*PSIMSLSVRWEPTK Trigger: CTTTGTGGGCTCCCATCTAACTGACAAACTCATGATGGATGGCCATGAGGTGACCGTGGTGGACAACTTCTTCACAGGCAGGAAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126008.8 ENSMUST00000139451.8 |
||
| CDS-3UTR CAA 90 bp | GACCATTGGGATGGCTGCCATAACAAAAGAATGAGCTATGGGTTGGTTGTCTATTTCATCCTCCTGCGGTaGACTGAAGAGACAAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: DHWDGCHNKRMSYGLVVYFILLR*TEETRR Trigger: GCGCCTTGTCTCTTCAGTCAACCGCAGGAGGATGAA...ATAGACAACCAACCCATAGCTCATTCTTTTGTTATGGCAGCCATCCCAATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136704.2 |
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| CDS-3UTR CAA 90 bp | AACTACAGAAAGGGTCCCCCTCTGCCTTCATCAGTTTGTACAGATACCTCATCTCTCATGTTAACAAAGTaGCCCCAAACAGAGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: NYRKGPPLPSSVCTDTSSLMLTK*PQTEAA Trigger: CGCCGCCTCTGTTTGGGGCAACTTTGTTAACATGAG...AGATGAGGTATCTGTACAAACTGATGAAGGCAGAGGGGGACCCTTTCTGTAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| CDS-3UTR CAA 90 bp | TCTACACCAGAAAAATGGAAGTTTTTGTTCCACCTGGTTTGTGCTGCTACAGGATTCACTCTGGCGGGCTaGGGTTTGGGGATGTACTGG | + |
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Preference number: 5 (lower is better) Translates to: STPEKWKFLFHLVCAATGFTLAG*GLGMYW Trigger: CCAGTACATCCCCAAACCCAAGCCCGCCAGAGTGAA...TCCTGTAGCAGCACAAACCAGGTGGAACAAAAACTTCCATTTTTCTGGTGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| CDS CCA 90 bp | TGTATTAGTCTTCAGTGTCTTGATGGGGTTGTACATGTAGTTTGGTaGGGAGGCTGGAGATGCCAGATGATATATCTGGTCAAAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: CISLQCLDGVVHVVW*GGWRCQMIYLVKGG Trigger: GCCGCCTTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCCATCAAGACACTGAAGACTAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153317.6 |
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| CDS-3UTR CAA 90 bp | AGCCCAGAGAGCACACAGATGGTTCTAACAGTTACATATCAAGTTAAATATGGTCTCGGCCCAAAGGTGTaGAAGATCCTTGCCACCCGT | + |
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Preference number: 5 (lower is better) Translates to: SPESTQMVLTVTYQVKYGLGPKV*KILATR Trigger: ACGGGTGGCAAGGATCTTCAACACCTTTGGGCCGAG...ACCATATTTAACTTGATATGTAACTGTTAGAACCATCTGTGTGCTCTCTGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| CDS-3UTR CAA 90 bp | TCAAGAACCAACAGGGATGTTTCAAAGTCAAGTTTGCAACTGAAAACTAGACCTTTCATCCTCCTGCGGTaGACTGAAGAGACAAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: SRTNRDVSKSSLQLKTRPFILLR*TEETRR Trigger: GCGCCTTGTCTCTTCAGTCAACCGCAGGAGGATGAA...AGGTCTAGTTTTCAGTTGCAAACTTGACTTTGAAACATCCCTGTTGGTTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076997.13 ENSMUST00000126008.8 |
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| CDS CCA 90 bp | AATTGTATTAGTCTTCAGTGTCTTGATGGGGTTGTACATGTAGTTTaGTGGGGAGGCTGGAGATGCCAGATGATATATCTGGTCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: NCISLQCLDGVVHVV*WGGWRCQMIYLVKG Trigger: GCCTTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCCATCAAGACACTGAAGACTAATACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153317.6 |
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| CDS-3UTR CAA 90 bp | TCAAGAACCAACAGGGATGTTTCAAAGTCAAGTTTGCAACTGAAAACTAGACCTACAGGACTGCTGACATaGCTGTTCATCAGTGCTACC | + |
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Preference number: 5 (lower is better) Translates to: SRTNRDVSKSSLQLKTRPTGLLT*LFISAT Trigger: GGTAGCACTGATGAACAGCAATGTCAGCAGTCCTGT...AGGTCTAGTTTTCAGTTGCAAACTTGACTTTGAAACATCCCTGTTGGTTCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| CDS-3UTR CAA 90 bp | AGCCCAGAGAGCACACAGATGGTTCTAACAGTTACATATCAAGTTAAATATGGTTCTGGATTTCCCAAGTaGACAGGACTGCTGACATTG | + |
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Preference number: 5 (lower is better) Translates to: SPESTQMVLTVTYQVKYGSGFPK*TGLLTL Trigger: CAATGTCAGCAGTCCTGTCAACTTGGGAAATCCAGA...ACCATATTTAACTTGATATGTAACTGTTAGAACCATCTGTGTGCTCTCTGGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126008.8 |
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| CDS CCA 90 bp | ACAATCTCTTCAATCTTGCTTTCGATCTTTAGTTCTCCATTTTCCTaGATAGACCTGTTGAGCAGAAAGCTCATGTTAACAAAGTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TISSILLSIFSSPFS*IDLLSRKLMLTKLP Trigger: GGGCAACTTTGTTAACATGAGCTTTCTGCTCAACAGGTCTATCCAGGAAAATGGAGAACTAAAGATCGAAAGCAAGATTGAAGAGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139451.8 |
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| CDS TCA 72 bp | GCGCGATGCCGAGCAGAAGCTTCATCCTCCTGCGGTTaGCTGAAGAGACAAGGCGCAACAGCCCCTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ARCRAEASSSCG*LKRQGATAPCS Trigger: TGAGCAAGGGGCTGTTGCGCCTTGTCTCTTCAGTCAACCGCAGGAGGATGAAGCTTCTGCTCGGCATCGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000076997.13 ENSMUST00000126008.8 ENSMUST00000128261.2 ENSMUST00000136704.2 ENSMUST00000139451.8 ENSMUST00000153317.6 |
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| CDS CAA 72 bp | AGCGCGATGCCGAGCAGAAGCTTCATCCTCCTGCGGTaGACTGAAGAGACAAGGCGCAACAGCCCCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SAMPSRSFILLR*TEETRRNSPLL Trigger: GAGCAAGGGGCTGTTGCGCCTTGTCTCTTCAGTCAACCGCAGGAGGATGAAGCTTCTGCTCGGCATCGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000076997.13 ENSMUST00000126008.8 ENSMUST00000128261.2 ENSMUST00000136704.2 ENSMUST00000139451.8 ENSMUST00000153317.6 |
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| CDS TCA 72 bp | GATGCCGAGCAGAAGCTTCATCCTCCTGCGGTTGACTaGAGAGACAAGGCGCAACAGCCCCTTGCTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: DAEQKLHPPAVD*RDKAQQPLAHH Trigger: ATGGTGAGCAAGGGGCTGTTGCGCCTTGTCTCTTCAGTCAACCGCAGGAGGATGAAGCTTCTGCTCGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000076997.13 ENSMUST00000126008.8 ENSMUST00000128261.2 ENSMUST00000136704.2 ENSMUST00000139451.8 ENSMUST00000153317.6 |
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| CDS GCA 72 bp | GGGGTTGTACATGTAGTTTGGTGGGGAGGCTGGAGATaGCAGATGATATATCTGGTCAAAGGCGGCGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: GVVHVVWWGGWR*QMIYLVKGGVG Trigger: GCCTACGCCGCCTTTGACCAGATATATCATCTGGCATCTCCAGCCTCCCCACCAAACTACATGTACAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153317.6 |
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| CDS CAA 72 bp | TCCACCACGGTCACCTCATGGCCATCCATCATGAGTTaGTCAGTTAGATGGGAGCCCACAAAGCCTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: STTVTSWPSIMS*SVRWEPTKPAP Trigger: AGGTGCAGGCTTTGTGGGCTCCCATCTAACTGACAAACTCATGATGGATGGCCATGAGGTGACCGTGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126008.8 ENSMUST00000139451.8 |
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| CDS TCA 72 bp | AGTTGTCCACCACGGTCACCTCATGGCCATCCATCATaGGTTTGTCAGTTAGATGGGAGCCCACAAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SCPPRSPHGHPS*VCQLDGSPQSL Trigger: CAGGCTTTGTGGGCTCCCATCTAACTGACAAACTCATGATGGATGGCCATGAGGTGACCGTGGTGGACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126008.8 ENSMUST00000139451.8 |
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| CDS CAA 90 bp | AAGAAGTTGTCCACCACGGTCACCTCATGGCCATCCATCATGAGTTaGTCAGTTAGATGGGAGCCCACAAAGCCTGCACCTCCAGTGATC | + |
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Preference number: 6 (lower is better) Translates to: KKLSTTVTSWPSIMS*SVRWEPTKPAPPVI Trigger: GATCACTGGAGGTGCAGGCTTTGTGGGCTCCCATCTAACTGACAAACTCATGATGGATGGCCATGAGGTGACCGTGGTGGACAACTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126008.8 ENSMUST00000139451.8 |
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| CDS CCA 72 bp | CTGCCTGTGAAGAAGTTGTCCACCACGGTCACCTCATaGCCATCCATCATGAGTTTGTCAGTTAGATGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPVKKLSTTVTS*PSIMSLSVRWE Trigger: CTCCCATCTAACTGACAAACTCATGATGGATGGCCATGAGGTGACCGTGGTGGACAACTTCTTCACAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126008.8 ENSMUST00000139451.8 |
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| CDS CCA 72 bp | ACCTCATGGCCATCCATCATGAGTTTGTCAGTTAGATaGGAGCCCACAAAGCCTGCACCTCCAGTGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: TSWPSIMSLSVR*EPTKPAPPVIK Trigger: TTTGATCACTGGAGGTGCAGGCTTTGTGGGCTCCCATCTAACTGACAAACTCATGATGGATGGCCATGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126008.8 ENSMUST00000139451.8 |
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| CDS CCA 72 bp | TCGACCACATCATGGTTAATCAGCTCGAAGTTCTCATaGCCAATCCAGTGTTCCACATTTCTCTTCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: STTSWLISSKFS*PIQCSTFLFLP Trigger: AGGCAGGAAGAGAAATGTGGAACACTGGATTGGCCATGAGAACTTCGAGCTGATTAACCATGATGTGGTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126008.8 ENSMUST00000139451.8 |
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| CDS CCA 72 bp | TCAATCTTGCTTTCGATCTTTAGTTCTCCATTTTCCTaGATAGACCTGTTGAGCAGAAAGCTCATGTTAACA | + |
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Preference number: 6 (lower is better) Translates to: SILLSIFSSPFS*IDLLSRKLMLT Trigger: TGTTAACATGAGCTTTCTGCTCAACAGGTCTATCCAGGAAAATGGAGAACTAAAGATCGAAAGCAAGATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139451.8 |
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