RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UVRAG (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035354

Ensembl transcript IDs: ENSMUST00000037968.10, ENSMUST00000208992.2, ENSMUST00000209123.2

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTGGCAGCAGGGTGCCGGCAGGGCCAGCCTGCTCGCTGGGCAGTaGAGTGCCATTCACGGCTGCCAGGTGCCCAGGCAGGGCTTCCCC +
Preference number: 1 (lower is better)
Translates to: AWQQGAGRASLLAGQ*SAIHGCQVPRQGFP
Trigger: GGGGAAGCCCTGCCTGGGCACCTGGCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCAGGCTGGCCCTGCCGGCACCCTGCTGCCAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp GCCGGGTGGCACGAGCCTGGCAGCAGGGTGCCGGCAGGGCCAGCCTaGTCGCTGGGCAGTGCAGTGCCATTCACGGCTGCCAGGTGCCCA +
Preference number: 1 (lower is better)
Translates to: AGWHEPGSRVPAGPA*SLGSAVPFTAARCP
Trigger: TGGGCACCTGGCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCAGGCTGGCCCTGCCGGCACCCTGCTGCCAGGCTCGTGCCACCCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp GGCACGAGCCTGGCAGCAGGGTGCCGGCAGGGCCAGCCTGCTCGCTaGGCAGTGCAGTGCCATTCACGGCTGCCAGGTGCCCAGGCAGGG +
Preference number: 1 (lower is better)
Translates to: GTSLAAGCRQGQPAR*AVQCHSRLPGAQAG
Trigger: CCCTGCCTGGGCACCTGGCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCAGGCTGGCCCTGCCGGCACCCTGCTGCCAGGCTCGTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp GCAGCAGGGTGCCGGCAGGGCCAGCCTGCTCGCTGGGCAGTGCAGTaGCATTCACGGCTGCCAGGTGCCCAGGCAGGGCTTCCCCCTGCT +
Preference number: 1 (lower is better)
Translates to: AAGCRQGQPARWAVQ*HSRLPGAQAGLPPA
Trigger: AGCAGGGGGAAGCCCTGCCTGGGCACCTGGCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCAGGCTGGCCCTGCCGGCACCCTGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp GGGCAGCGGCTCTCCCTGGTCCTACGGTCTGCCTGCCTGCCTGCCTaGCTGCCTGCCTGCCTCACTTGTCGGAACTCCTGCGAGGCCGGC +
Preference number: 1 (lower is better)
Translates to: GQRLSLVLRSACLPA*LPACLTCRNSCEAG
Trigger: GCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGACCAGGGAGAGCCGCTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp TCTGCTTGCTCCACTGCACAGCAGAGCTCAGCTGAGGGGGCCGGGTaGCACGAGCCTGGCAGCAGGGTGCCGGCAGGGCCAGCCTGCTCG +
Preference number: 1 (lower is better)
Translates to: SACSTAQQSSAEGAG*HEPGSRVPAGPACS
Trigger: CGAGCAGGCTGGCCCTGCCGGCACCCTGCTGCCAGGCTCGTGCCACCCGGCCCCCTCAGCTGAGCTCTGCTGTGCAGTGGAGCAAGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp CCCAGGGAGGGCAGCGGCTCTCCCTGGTCCTACGGTCTGCCTGCCTaGCTGCCTGCCTGCCTGCCTGCCTCACTTGTCGGAACTCCTGCG +
Preference number: 1 (lower is better)
Translates to: PREGSGSPWSYGLPA*LPACLPASLVGTPA
Trigger: CGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGACCAGGGAGAGCCGCTGCCCTCCCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp GCTCTCCCTGGTCCTACGGTCTGCCTGCCTGCCTGCCTGCCTGCCTaGCTGCCTCACTTGTCGGAACTCCTGCGAGGCCGGCGGAAGCTG +
Preference number: 1 (lower is better)
Translates to: ALPGPTVCLPACLPA*LPHLSELLRGRRKL
Trigger: CAGCTTCCGCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGACCAGGGAGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp AGCGGCTCTCCCTGGTCCTACGGTCTGCCTGCCTGCCTGCCTGCCTaGCTGCCTGCCTCACTTGTCGGAACTCCTGCGAGGCCGGCGGAA +
Preference number: 1 (lower is better)
Translates to: SGSPWSYGLPACLPA*LPASLVGTPARPAE
Trigger: TTCCGCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGACCAGGGAGAGCCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp CCAGCCTGCTCGCTGGGCAGTGCAGTGCCATTCACGGCTGCCAGGTaGCCAGGCAGGGCTTCCCCCTGCTCTTGGCCGGAGTCCGAGTTT +
Preference number: 1 (lower is better)
Translates to: PACSLGSAVPFTAAR*PGRASPCSWPESEF
Trigger: AAACTCGGACTCCGGCCAAGAGCAGGGGGAAGCCCTGCCTGGGCACCTGGCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCAGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp TCCCTGGTCCTACGGTCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTaGCTCACTTGTCGGAACTCCTGCGAGGCCGGCGGAAGCTGGACA +
Preference number: 1 (lower is better)
Translates to: SLVLRSACLPACLPA*LTCRNSCEAGGSWT
Trigger: TGTCCAGCTTCCGCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGACCAGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp AAAGATGAAGTGAAGCTTGGCCCCAGGGAGGGCAGCGGCTCTCCCTaGTCCTACGGTCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC +
Preference number: 1 (lower is better)
Translates to: KDEVKLGPREGSGSP*SYGLPACLPACLPA
Trigger: GGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGACCAGGGAGAGCCGCTGCCCTCCCTGGGGCCAAGCTTCACTTCATCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR GCA 90 bp CTCCTCAAACTCCCCCAGCACCTGCTCGTCACACTCCACTGCCACTaGGCTGTCCACCGGGATGCAGCTGAGCGCCTCCAGCTGGTCACC +
Preference number: 1 (lower is better)
Translates to: LLKLPQHLLVTLHCH*AVHRDAAERLQLVT
Trigger: GGTGACCAGCTGGAGGCGCTCAGCTGCATCCCGGTGGACAGCGCAGTGGCAGTGGAGTGTGACGAGCAGGTGCTGGGGGAGTTTGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp ACTGCCACTGCGCTGTCCACCGGGATGCAGCTGAGCGCCTCCAGCTaGTCACCCGAGGTGAAGCCTGTGGCTTCCAGCCCGATGATTTCC +
Preference number: 1 (lower is better)
Translates to: TATALSTGMQLSASS*SPEVKPVASSPMIS
Trigger: GGAAATCATCGGGCTGGAAGCCACAGGCTTCACCTCGGGTGACCAGCTGGAGGCGCTCAGCTGCATCCCGGTGGACAGCGCAGTGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp AGAGAACTCCTCAAACTCCCCCAGCACCTGCTCGTCACACTCCACTaGCACTGCGCTGTCCACCGGGATGCAGCTGAGCGCCTCCAGCTG +
Preference number: 1 (lower is better)
Translates to: RELLKLPQHLLVTLH*HCAVHRDAAERLQL
Trigger: CAGCTGGAGGCGCTCAGCTGCATCCCGGTGGACAGCGCAGTGGCAGTGGAGTGTGACGAGCAGGTGCTGGGGGAGTTTGAGGAGTTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 90 bp TGTCGGAACTCCTGCGAGGCCGGCGGAAGCTGGACACGTTCTCGCTaGGGGCATAGATCCTGCGAGAGAACTCCTCAAACTCCCCCAGCA +
Preference number: 1 (lower is better)
Translates to: CRNSCEAGGSWTRSR*GHRSCERTPQTPPA
Trigger: TGCTGGGGGAGTTTGAGGAGTTCTCTCGCAGGATCTATGCCCTCAGCGAGAACGTGTCCAGCTTCCGCCGGCCTCGCAGGAGTTCCGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp AGGACAGAGGGGCGACCTTTCTCTCAGAGTCTCCCGAGGTGGGCATaGCCACCCCGGGCTGTGTCAATGCTGAATTGTAGCTGGGAGGTG +
Preference number: 1 (lower is better)
Translates to: RTEGRPFSQSLPRWA*PPRAVSMLNCSWEV
Trigger: CACCTCCCAGCTACAATTCAGCATTGACACAGCCCGGGGTGGCCATGCCCACCTCGGGAGACTCTGAGAGAAAGGTCGCCCCTCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp AGCCTCAGGTGGCAATCACAGGTCACATGGGACTCTCCTGTCACCTaGACCAGACTGACCTTCAAACACCTGGAGACGCCACCTCTCCCC +
Preference number: 1 (lower is better)
Translates to: SLRWQSQVTWDSPVT*TRLTFKHLETPPLP
Trigger: GGGGAGAGGTGGCGTCTCCAGGTGTTTGAAGGTCAGTCTGGTGCAGGTGACAGGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR GCA 90 bp CTGCCGGTCAGGGTCAGGGTCAGGGGACTAGAACGTGTGTACATCTaGATGGAGCCTCAGGTGGCAATCACAGGTCACATGGGACTCTCC +
Preference number: 1 (lower is better)
Translates to: LPVRVRVRGLERVYI*MEPQVAITGHMGLS
Trigger: GGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCTCCATGCAGATGTACACACGTTCTAGTCCCCTGACCCTGACCCTGACCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR TCA 90 bp CTCTGTACCCATGATGGTGAGGTCCTCCACCCTGCTAACACCCTGTaGAGCAGCCTCCCTCACCCCCACAAATGGACTTCCTCAGACCAA +
Preference number: 1 (lower is better)
Translates to: LCTHDGEVLHPANTL*SSLPHPHKWTSSDQ
Trigger: TTGGTCTGAGGAAGTCCATTTGTGGGGGTGAGGGAGGCTGCTTCACAGGGTGTTAGCAGGGTGGAGGACCTCACCATCATGGGTACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR TCA 90 bp GGCAATCACAGGTCACATGGGACTCTCCTGTCACCTGCACCAGACTaGCCTTCAAACACCTGGAGACGCCACCTCTCCCCAGGGTTAAAC +
Preference number: 1 (lower is better)
Translates to: GNHRSHGTLLSPAPD*PSNTWRRHLSPGLN
Trigger: GTTTAACCCTGGGGAGAGGTGGCGTCTCCAGGTGTTTGAAGGTCAGTCTGGTGCAGGTGACAGGAGAGTCCCATGTGACCTGTGATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CCA 90 bp AGCTGGGAGGTGGGGTTTTGTACTGGAGTCTCTCGTTCTCTGAGCTaGCCCGCTTGCGATGGACTTTATCTGGTGATGGGATACCCGCAG +
Preference number: 1 (lower is better)
Translates to: SWEVGFCTGVSRSLS*PACDGLYLVMGYPQ
Trigger: CTGCGGGTATCCCATCACCAGATAAAGTCCATCGCAAGCGGGCCAGCTCAGAGAACGAGAGACTCCAGTACAAAACCCCACCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp GTGGGGTTTTGTACTGGAGTCTCTCGTTCTCTGAGCTGGCCCGCTTaGGATGGACTTTATCTGGTGATGGGATACCCGCAGAGAAGCCTC +
Preference number: 1 (lower is better)
Translates to: VGFCTGVSRSLSWPA*DGLYLVMGYPQRSL
Trigger: GAGGCTTCTCTGCGGGTATCCCATCACCAGATAAAGTCCATCGCAAGCGGGCCAGCTCAGAGAACGAGAGACTCCAGTACAAAACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp CGAGTTTCCGTGGTCTCCGCTCACACTGCTGCCCAGGTCTACTCCTaGTTTCTTGTTTTCTTTGGAGAAGTCCAGGGAGGTGTCCAGGGA +
Preference number: 1 (lower is better)
Translates to: RVSVVSAHTAAQVYS*FLVFFGEVQGGVQG
Trigger: TCCCTGGACACCTCCCTGGACTTCTCCAAAGAAAACAAGAAAGCAGGAGTAGACCTGGGCAGCAGTGTGAGCGGAGACCACGGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp GCTCTTGGCCGGAGTCCGAGTTTCCGTGGTCTCCGCTCACACTGCTaGCCAGGTCTACTCCTGCTTTCTTGTTTTCTTTGGAGAAGTCCA +
Preference number: 1 (lower is better)
Translates to: ALGRSPSFRGLRSHC*PGLLLLSCFLWRSP
Trigger: TGGACTTCTCCAAAGAAAACAAGAAAGCAGGAGTAGACCTGGGCAGCAGTGTGAGCGGAGACCACGGAAACTCGGACTCCGGCCAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp CCTGCTCTTGGCCGGAGTCCGAGTTTCCGTGGTCTCCGCTCACACTaGTGCCCAGGTCTACTCCTGCTTTCTTGTTTTCTTTGGAGAAGT +
Preference number: 1 (lower is better)
Translates to: PALGRSPSFRGLRSH*CPGLLLLSCFLWRS
Trigger: ACTTCTCCAAAGAAAACAAGAAAGCAGGAGTAGACCTGGGCAGCAGTGTGAGCGGAGACCACGGAAACTCGGACTCCGGCCAAGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp GTGATGGGATACCCGCAGAGAAGCCTCCATCTGCACCCCCAAACGTaGAGCTTTGTCTCTTCGGGACAGGGATGGCATTGGAGATGTGAT +
Preference number: 1 (lower is better)
Translates to: VMGYPQRSLHLHPQT*SFVSSGQGWHWRCD
Trigger: ATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCCACGTTTGGGGGTGCAGATGGAGGCTTCTCTGCGGGTATCCCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 90 bp GCTGCTCATGCTGGTTACTCAGGCCTGACACAGACACAGGGGCCTTaGCAACTGGCTGTCCTGACAGTGTTCCCATCTCAGTATTTGGTG +
Preference number: 1 (lower is better)
Translates to: AAHAGYSGLTQTQGP*QLAVLTVFPSQYLV
Trigger: CACCAAATACTGAGATGGGAACACTGTCAGGACAGCCAGTTGTCAAGGCCCCTGTGTCTGTGTCAGGCCTGAGTAACCAGCATGAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 90 bp GACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGGAAGCAGGCTaGGCAAGCCAGGGGAAGCAAGCCAGTAAGGAACATCTCTCCATG +
Preference number: 1 (lower is better)
Translates to: DHLWAGSLGFYKEAG*ASQGKQASKEHLSM
Trigger: CATGGAGAGATGTTCCTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCCTGCTTCCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR GCA 90 bp GTGGAAAATGCACTTCCTTTGTCCTGTAGAGCCATCTGTTGCTTATaGAGGAAGGCCACCTCCCGCCCCAGCGCTTTCTTCTGTCTTTCC +
Preference number: 1 (lower is better)
Translates to: VENALPLSCRAICCL*RKATSRPSAFFCLS
Trigger: GGAAAGACAGAAGAAAGCGCTGGGGCGGGAGGTGGCCTTCCTGCATAAGCAACAGATGGCTCTACAGGACAAAGGAAGTGCATTTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR GCA 90 bp AGATCATGGAGACCAAATGTGCAGTGTAACCAAGGGCGACGGCAATaGTTCCATCATCTTTTGCATCCCGCCTTCCCAGTCCCTGAGGCA +
Preference number: 1 (lower is better)
Translates to: RSWRPNVQCNQGRRQ*FHHLLHPAFPVPEA
Trigger: TGCCTCAGGGACTGGGAAGGCGGGATGCAAAAGATGATGGAAGCATTGCCGTCGCCCTTGGTTACACTGCACATTTGGTCTCCATGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp GGAACATCTCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTaGTTGAGTTCCAGTCCTGACTTCCTTGGTGACAAACAGCAATGT +
Preference number: 1 (lower is better)
Translates to: GTSLHGLCISSCFLT*LSSSPDFLGDKQQC
Trigger: ACATTGCTGTTTGTCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGAGATGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR GCA 90 bp AGAATTGCGAACACAGTTCTGGTCCACCTGAAGGAGGTTCTTCTGTaGGTTTGGATGACCCTTGTGTTCACAGGGAGCACCGTAGTAGCC +
Preference number: 1 (lower is better)
Translates to: RIANTVLVHLKEVLL*VWMTLVFTGSTVVA
Trigger: GGCTACTACGGTGCTCCCTGTGAACACAAGGGTCATCCAAACGCACAGAAGAACCTCCTTCAGGTGGACCAGAACTGTGTTCGCAATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR CCA 90 bp GCGAACACAGTTCTGGTCCACCTGAAGGAGGTTCTTCTGTGCGTTTaGATGACCCTTGTGTTCACAGGGAGCACCGTAGTAGCCATCATT +
Preference number: 1 (lower is better)
Translates to: ANTVLVHLKEVLLCV*MTLVFTGSTVVAII
Trigger: AATGATGGCTACTACGGTGCTCCCTGTGAACACAAGGGTCATCCAAACGCACAGAAGAACCTCCTTCAGGTGGACCAGAACTGTGTTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR CCA 90 bp CATCTGCACCCCCAAACGTGGAGCTTTGTCTCTTCGGGACAGGGATaGCATTGGAGATGTGATGTCTGTCACTGTTTCCTTTCGCCTGAT +
Preference number: 1 (lower is better)
Translates to: HLHPQTWSFVSSGQG*HWRCDVCHCFLSPD
Trigger: ATCAGGCGAAAGGAAACAGTGACAGACATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCCACGTTTGGGGGTGCAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp ACCATCAGTCCGTGCTCCATGAAGTTTTTCAGGTTAGGAAGAGTTTaGCTCAAGTCTGGAGTCCCCAGGCCATGCTGGTATCTCAGCTGT +
Preference number: 1 (lower is better)
Translates to: TISPCSMKFFRLGRV*LKSGVPRPCWYLSC
Trigger: ACAGCTGAGATACCAGCATGGCCTGGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTGAAAAACTTCATGGAGCACGGACTGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp GCTCACTCAGGGAGTCCTTCTGCAGCTGGAGCTTGCCATGCTCAGTaGAAAATGCACTTCCTTTGTCCTGTAGAGCCATCTGTTGCTTAT +
Preference number: 1 (lower is better)
Translates to: AHSGSPSAAGACHAQ*KMHFLCPVEPSVAY
Trigger: ATAAGCAACAGATGGCTCTACAGGACAAAGGAAGTGCATTTTCCACTGAGCATGGCAAGCTCCAGCTGCAGAAGGACTCCCTGAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR GCA 90 bp AACCCAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTaGCTCTCCCTATGCTTTGTCATGTATAATGGCTTCCTTCTGACG +
Preference number: 1 (lower is better)
Translates to: NPTISTVSWSAHWAS*LSLCFVMYNGFLLT
Trigger: CGTCAGAAGGAAGCCATTATACATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR GCA 90 bp ACTGGGCTCTATGAAGCCGCAGCAAAGAGAAGACATCGTAAGAATTaGGAACACAGTTCTGGTCCACCTGAAGGAGGTTCTTCTGTGCGT +
Preference number: 1 (lower is better)
Translates to: TGLYEAAAKRRHRKN*EHSSGPPEGGSSVR
Trigger: ACGCACAGAAGAACCTCCTTCAGGTGGACCAGAACTGTGTTCGCAATTCTTACGATGTCTTCTCTTTGCTGCGGCTTCATAGAGCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR CCA 90 bp CAGAAGGTAGACACCATAGTCAAACTGCAGCTTCTCCCCTCCCTTTaGATACAGTGGAAACTCTCGCTCCTTTTCTGTCAGCTTGTCGTT +
Preference number: 1 (lower is better)
Translates to: QKVDTIVKLQLLPSL*IQWKLSLLFCQLVV
Trigger: AACGACAAGCTGACAGAAAAGGAGCGAGAGTTTCCACTGTATCCAAAGGGAGGGGAGAAGCTGCAGTTTGACTATGGTGTCTACCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp GTGCTCCATGAAGTTTTTCAGGTTAGGAAGAGTTTGCCTCAAGTCTaGAGTCCCCAGGCCATGCTGGTATCTCAGCTGTGCTATGTTCTT +
Preference number: 1 (lower is better)
Translates to: VLHEVFQVRKSLPQV*SPQAMLVSQLCYVL
Trigger: AAGAACATAGCACAGCTGAGATACCAGCATGGCCTGGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTGAAAAACTTCATGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp GACACCATAGTCAAACTGCAGCTTCTCCCCTCCCTTTGGATACAGTaGAAACTCTCGCTCCTTTTCTGTCAGCTTGTCGTTGATGTTATC +
Preference number: 1 (lower is better)
Translates to: DTIVKLQLLPSLWIQ*KLSLLFCQLVVDVI
Trigger: GATAACATCAACGACAAGCTGACAGAAAAGGAGCGAGAGTTTCCACTGTATCCAAAGGGAGGGGAGAAGCTGCAGTTTGACTATGGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 90 bp CAAACAGAAATTAGACATAAACATGCAAAGCAAACATCTTCAATCTaGATCAGACTTGCAGGCGGAGGAGAAGGCAGCCCCAGTGAACAA +
Preference number: 1 (lower is better)
Translates to: QTEIRHKHAKQTSSI*IRLAGGGEGSPSEQ
Trigger: TTGTTCACTGGGGCTGCCTTCTCCTCCGCCTGCAAGTCTGATCCAGATTGAAGATGTTTGCTTTGCATGTTTATGTCTAATTTCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 90 bp TCCATTTTGCAAAGTGTTCCAAATGATGGAGAGGGCGGATGCTTATaGGAAACTAAAGGTGAGCTCCTTCTGTTACACAGATTCCCATCT +
Preference number: 1 (lower is better)
Translates to: SILQSVPNDGEGGCL*ETKGELLLLHRFPS
Trigger: AGATGGGAATCTGTGTAACAGAAGGAGCTCACCTTTAGTTTCTCATAAGCATCCGCCCTCTCCATCATTTGGAACACTTTGCAAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR TCA 90 bp AGTCCTGACTTCCTTGGTGACAAACAGCAATGTGGAAATGTAAGCTaGATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTT +
Preference number: 1 (lower is better)
Translates to: SPDFLGDKQQCGNVS*INPFLPNLLLGHDV
Trigger: AACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACATTTCCACATTGCTGTTTGTCACCAAGGAAGTCAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR TCA 90 bp AGCTTGTCGTTGATGTTATCTTTGATTGTTGATCTGGACCCCTTGTaGATTATGGGATACCTGAGGGGTACTTGTAGGAAGAAGGAGATC +
Preference number: 1 (lower is better)
Translates to: SLSLMLSLIVDLDPL*IMGYLRGTCRKKEI
Trigger: GATCTCCTTCTTCCTACAAGTACCCCTCAGGTATCCCATAATTCACAAGGGGTCCAGATCAACAATCAAAGATAACATCAACGACAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 90 bp ACTTCCTCAGACCAAGCAAAAGCACCCATTTGCAGGAGGGCTGTCTaGTGTGTAATAAGTCTATGCATTTTCTATATGGAAATAGTGGTG +
Preference number: 1 (lower is better)
Translates to: TSSDQAKAPICRRAV*CVISLCIFYMEIVV
Trigger: CACCACTATTTCCATATAGAAAATGCATAGACTTATTACACAGCAGACAGCCCTCCTGCAAATGGGTGCTTTTGCTTGGTCTGAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR GCA 90 bp AATTTCCTTTCCAAGTCTCTGAACAGTTACCTGAGTCTGTTTAATTaGACACTGGGCTCTATGAAGCCGCAGCAAAGAGAAGACATCGTA +
Preference number: 1 (lower is better)
Translates to: NFLSKSLNSYLSLFN*TLGSMKPQQREDIV
Trigger: TACGATGTCTTCTCTTTGCTGCGGCTTCATAGAGCCCAGTGTGCAATTAAACAGACTCAGGTAACTGTTCAGAGACTTGGAAAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR CCA 90 bp CGGAACAGAGACCATCACACTGTTTCTTATTCTCAATCTAAAGGATaGGTACAGGCCTCTCAAGGGTGGAAAGTTATTTTTGAATATTCC +
Preference number: 1 (lower is better)
Translates to: RNRDHHTVSYSQSKG*VQASQGWKVIFEYS
Trigger: GGAATATTCAAAAATAACTTTCCACCCTTGAGAGGCCTGTACCCATCCTTTAGATTGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR CCA 90 bp TTGTTACAGTTACTACCCGGAAGGCAGATTCTATGTACTTCTAGCTaGGAAAGTACAGAAATTCTAAAATCCCCTTTAGACAAAGTACTA +
Preference number: 1 (lower is better)
Translates to: LLQLLPGRQILCTSS*ESTEILKSPLDKVL
Trigger: TAGTACTTTGTCTAAAGGGGATTTTAGAATTTCTGTACTTTCCCAGCTAGAAGTACATAGAATCTGCCTTCCGGGTAGTAACTGTAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR TCA 90 bp TGCTGTGTAATAAGTCTATGCATTTTCTATATGGAAATAGTGGTGTaGATTAGTTCATCTAGCAATATGGTGGCTGTACTGGCTAGTTTT +
Preference number: 1 (lower is better)
Translates to: CCVISLCIFYMEIVV*ISSSSNMVAVLASF
Trigger: AAAACTAGCCAGTACAGCCACCATATTGCTAGATGAACTAATTCACACCACTATTTCCATATAGAAAATGCATAGACTTATTACACAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR-3UTR GCA 90 bp ACGAGCCTGGCAGCAGGGTGCCGGCAGGGCCAGCCTGCTCGCTGGGCAGTGCAGTTCACGGCTGCCAGGTaGCCAGGCAGGGCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: TSLAAGCRQGQPARWAVQFTAAR*PGRASP
Trigger: GGGGGAAGCCCTGCCTGGGCACCTGGCAGCCGTGAA...CTGCACTGCCCAGCGAGCAGGCTGGCCCTGCCGGCACCCTGCTGCCAGGCTCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CAA 90 bp CCTACGGTCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTCACTaGTCGGAACTCCTGCGAGGCCGGCGGAAGCTGGACACGTTCTCG +
Preference number: 2 (lower is better)
Translates to: PTVCLPACLPACLPH*SELLRGRRKLDTFS
Trigger: CGAGAACGTGTCCAGCTTCCGCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp ACGAGCCTGGCAGCAGGGTGCCGGCAGGGCCAGCCTGCTCGCTGGGCAGTGCAGCTGGTTACTCAGGCCTaGCACAGACACAGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: TSLAAGCRQGQPARWAVQLVTQA*HRHRGL
Trigger: AAGGCCCCTGTGTCTGTGTCAGGCCTGAGTAACCAG...CTGCACTGCCCAGCGAGCAGGCTGGCCCTGCCGGCACCCTGCTGCCAGGCTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp TGCTCGCTGGGCAGTGCAGTGCCATTCACGGCTGCCAGGTGCCCAGGCAGGGCTGTCCTACGGTCTGCCTaGCTGCCTGCCTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: CSLGSAVPFTAARCPGRAVLRSA*LPACLP
Trigger: AGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGAC...AGCCCTGCCTGGGCACCTGGCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp TCACACTCCACTGCCACTGCGCTGTCCACCGGGATGCAGCTGAGCGCCTCCAGCCTCCCGAGGTGGGCATaGCCACCCCGGGCTGTGTCA +
Preference number: 2 (lower is better)
Translates to: SHSTATALSTGMQLSASSLPRWA*PPRAVS
Trigger: TGACACAGCCCGGGGTGGCCATGCCCACCTCGGGAG...GCTGGAGGCGCTCAGCTGCATCCCGGTGGACAGCGCAGTGGCAGTGGAGTGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp TGCCTGCCTGCCTGCCTCACTTGTCGGAACTCCTGCGAGGCCGGCGGAAGCTGGCGCCTTCCCAGTCCCTaGGGCAGCTCCTCTGTTAAG +
Preference number: 2 (lower is better)
Translates to: CLPACLTCRNSCEAGGSWRLPSP*GSSSVK
Trigger: CTTAACAGAGGAGCTGCCTCAGGGACTGGGAAGGCG...CCAGCTTCCGCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp CAGGATGCATGGCCCATCTTGAGGAAGCAGGGCAACAGCGGGGTCTGCAGGCTGCCTGGTCCTACGGTCTaGCTGCCTGCCTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: QDAWPILRKQGNSGVCRLPGPTV*LPACLP
Trigger: AGGCAGGCAGGCAGGCAGGCAGACCGTAGGACCAGG...CAGCCTGCAGACCCCGCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp TGCCTGCCTGCCTGCCTCACTTGTCGGAACTCCTGCGAGGCCGGCGGAAGCTGGCTGAGCTGGCCCGCTTaGGATGGACTTTATCTGGTG +
Preference number: 2 (lower is better)
Translates to: CLPACLTCRNSCEAGGSWLSWPA*DGLYLV
Trigger: CACCAGATAAAGTCCATCGCAAGCGGGCCAGCTCAG...CCAGCTTCCGCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp CAGGATGCATGGCCCATCTTGAGGAAGCAGGGCAACAGCGGGGTCTGCAGGCTGCTGCTCGCTGGGCAGTaGAGTGCCATTCACGGCTGC +
Preference number: 2 (lower is better)
Translates to: QDAWPILRKQGNSGVCRLLLAGQ*SAIHGC
Trigger: GCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCAG...CAGCCTGCAGACCCCGCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp CAGGATGCATGGCCCATCTTGAGGAAGCAGGGCAACAGCGGGGTCTGCAGGCTGGCTTCCCCCTGCTCTTaGCCGGAGTCCGAGTTTCCG +
Preference number: 2 (lower is better)
Translates to: QDAWPILRKQGNSGVCRLASPCS*PESEFP
Trigger: CGGAAACTCGGACTCCGGCCAAGAGCAGGGGGAAGC...CAGCCTGCAGACCCCGCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCATCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp CAGGATGCATGGCCCATCTTGAGGAAGCAGGGCAACAGCGGGGTCTGCAGGCTGATGCATGGCCCATCTTaGGGAAGCAGGGCAACAGCG +
Preference number: 2 (lower is better)
Translates to: QDAWPILRKQGNSGVCRLMHGPS*GSRATA
Trigger: CGCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCAT...CAGCCTGCAGACCCCGCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp TCCAGGGAGGAGGACAGAGGGGCGACCTTTCTCTCAGAGTCTCCCGAGGTGGGCAGAGAAGCCTCCATCTaGACCCCCAAACGTGGAGCT +
Preference number: 2 (lower is better)
Translates to: SREEDRGATFLSESPEVGREASI*TPKRGA
Trigger: AGCTCCACGTTTGGGGGTGCAGATGGAGGCTTCTCT...GCCCACCTCGGGAGACTCTGAGAGAAAGGTCGCCCCTCTGTCCTCCTCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp TCACACTCCACTGCCACTGCGCTGTCCACCGGGATGCAGCTGAGCGCCTCCAGCTATTCAAAGATGAAGTaGAGCTTGGCCCCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SHSTATALSTGMQLSASSYSKMK*SLAPGR
Trigger: CCTCCCTGGGGCCAAGCTTCACTTCATCTTTGAATA...GCTGGAGGCGCTCAGCTGCATCCCGGTGGACAGCGCAGTGGCAGTGGAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp CAGGATGCATGGCCCATCTTGAGGAAGCAGGGCAACAGCGGGGTCTGCAGGCTGTCTCTCCATGGCCTCTaGATCAGCTCCTGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: QDAWPILRKQGNSGVCRLSLHGL*ISSCFL
Trigger: CAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGAGA...CAGCCTGCAGACCCCGCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR-3UTR GCA 90 bp TCCAGGGAGGAGGACAGAGGGGCGACCTTTCTCTCAGAGTCTCCCGAGGTGGGCTGCCTTTGCTGCTCATaGTGGTTACTCAGGCCTGAC +
Preference number: 2 (lower is better)
Translates to: SREEDRGATFLSESPEVGCLCCS*WLLRPD
Trigger: GTCAGGCCTGAGTAACCAGCATGAGCAGCAAAGGCA...GCCCACCTCGGGAGACTCTGAGAGAAAGGTCGCCCCTCTGTCCTCCTCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp CACTGGTACCCAATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGTCCTACGGTCTGCCTaGCTGCCTGCCTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: HWYPMTLSPLSSQSQPLRVLRSA*LPACLP
Trigger: AGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGAC...TCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCATTGGGTACCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp TGCCTGCCTGCCTCACTTGTCGGAACTCCTGCGAGGCCGGCGGAAGCTGGACACGAATTATGGGATACCTaGGGGGTACTTGTAGGAAGA +
Preference number: 2 (lower is better)
Translates to: CLPASLVGTPARPAEAGHELWDT*GVLVGR
Trigger: TCTTCCTACAAGTACCCCTCAGGTATCCCATAATTC...GTGTCCAGCTTCCGCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp ATCAAGGGGGAAAGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGTATAAGGAAGCAGGCTaGGCAAGCCAGGGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: IKGERPLVGGTISGLVVLYKEAG*ASQGKQ
Trigger: TTGCTTCCCCTGGCTTGCTCAGCCTGCTTCCTTATA...CAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR-3UTR GCA 90 bp ATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATCTGCTCCGCAGAGGGCGACCTTTaGCCAGAAACAACCGCCAGG +
Preference number: 2 (lower is better)
Translates to: MTLSPLSSQSQPLRGICSAEGDL*PETTAR
Trigger: CCTGGCGGTTGTTTCTGGGCAAAGGTCGCCCTCTGC...GGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR CAA 90 bp GATACCCGCAGAGAAGCCTCCATCTGCACCCCCAAACGTGGAGCTTaGTCTCTTCGGGACAGGGATGGCATTGGAGATGTGATGTCTGTC +
Preference number: 2 (lower is better)
Translates to: DTRREASICTPKRGA*SLRDRDGIGDVMSV
Trigger: GACAGACATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCCACGTTTGGGGGTGCAGATGGAGGCTTCTCTGCGGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CAA 90 bp GGTGGGGTTTTGTACTGGAGTCTCTCGTTCTCTGAGCTGGCCCGCTaGCGATGGACTTTATCTGGTGATGGGATACCCGCAGAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: GGVLYWSLSFSELAR*RWTLSGDGIPAEKP
Trigger: AGGCTTCTCTGCGGGTATCCCATCACCAGATAAAGTCCATCGCAAGCGGGCCAGCTCAGAGAACGAGAGACTCCAGTACAAAACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp TCACACTCCACTGCCACTGCGCTGTCCACCGGGATGCAGCTGAGCGCCTCCAGCGTTATCTTTGATTGTTaGTCTGGACCCCTTGTGAAT +
Preference number: 2 (lower is better)
Translates to: SHSTATALSTGMQLSASSVIFDC*SGPLVN
Trigger: ATTCACAAGGGGTCCAGATCAACAATCAAAGATAAC...GCTGGAGGCGCTCAGCTGCATCCCGGTGGACAGCGCAGTGGCAGTGGAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp ATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATCTGCTCCTCACTGGCAGAGGTCTaGGCACAGAGGATGCTGGAC +
Preference number: 2 (lower is better)
Translates to: MTLSPLSSQSQPLRGICSSLAEV*AQRMLD
Trigger: GTCCAGCATCCTCTGTGCGCAGACCTCTGCCAGTGA...GGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAACCACCGGGATGCAGCTaGGCGCCTCCAGCTGGTCAC +
Preference number: 2 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQPPGCS*APPAGH
Trigger: GTGACCAGCTGGAGGCGCTCAGCTGCATCCCGGTGG...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp ATGGAGAGGGCGGATGCTTATGAGAAACTAAAGGTGAGCTCCTTCTGTTACACACCTGGTCCTACGGTCTaGCTGCCTGCCTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: MERADAYEKLKVSSFCYTPGPTV*LPACLP
Trigger: AGGCAGGCAGGCAGGCAGGCAGACCGTAGGACCAGG...TGTGTAACAGAAGGAGCTCACCTTTAGTTTCTCATAAGCATCCGCCCTCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp CACACTGCTGCCCAGGTCTACTCCTGCTTTCTTGTTTTCTTTGGAGAAGTCCAGGCAGAGGGCGACCTTTaGCCAGAAACAACCGCCAGG +
Preference number: 2 (lower is better)
Translates to: HTAAQVYSCFLVFFGEVQAEGDL*PETTAR
Trigger: CCTGGCGGTTGTTTCTGGGCAAAGGTCGCCCTCTGC...CTGGACTTCTCCAAAGAAAACAAGAAAGCAGGAGTAGACCTGGGCAGCAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp GGAGCTTTGTCTCTTCGGGACAGGGATGGCATTGGAGATGTGATGTCTGTCACTGGAGTCCCCAGGCCATaGTGGTATCTCAGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: GALSLRDRDGIGDVMSVTGVPRP*WYLSCA
Trigger: AGCACAGCTGAGATACCAGCATGGCCTGGGGACTCC...AGTGACAGACATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp ACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATGCTTTGTCATGGCCCCCAAAGAAATCTaGCTGCCATCTGACTGTGGT +
Preference number: 2 (lower is better)
Translates to: TVSWSAHWASCLSLCFVMAPKEI*LPSDCG
Trigger: ACCACAGTCAGATGGCAGCCAGATTTCTTTGGGGGC...CATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR CAA 90 bp TGCTGCTCATGCTGGTTACTCAGGCCTGACACAGACACAGGGGCCTaGACAACTGGCTGTCCTGACAGTGTTCCCATCTCAGTATTTGGT +
Preference number: 2 (lower is better)
Translates to: CCSCWLLRPDTDTGA*TTGCPDSVPISVFG
Trigger: ACCAAATACTGAGATGGGAACACTGTCAGGACAGCCAGTTGTCAAGGCCCCTGTGTCTGTGTCAGGCCTGAGTAACCAGCATGAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CAA 90 bp ACATCTCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTaGAGTTCCAGTCCTGACTTCCTTGGTGACAAACAGCAATGTGGA +
Preference number: 2 (lower is better)
Translates to: TSLHGLCISSCFLTC*SSSPDFLGDKQQCG
Trigger: TCCACATTGCTGTTTGTCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CAA 90 bp TGCGAACACAGTTCTGGTCCACCTGAAGGAGGTTCTTCTGTGCGTTaGGATGACCCTTGTGTTCACAGGGAGCACCGTAGTAGCCATCAT +
Preference number: 2 (lower is better)
Translates to: CEHSSGPPEGGSSVR*DDPCVHREHRSSHH
Trigger: ATGATGGCTACTACGGTGCTCCCTGTGAACACAAGGGTCATCCAAACGCACAGAAGAACCTCCTTCAGGTGGACCAGAACTGTGTTCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR CAA 90 bp GACCATCAGTCCGTGCTCCATGAAGTTTTTCAGGTTAGGAAGAGTTaGCCTCAAGTCTGGAGTCCCCAGGCCATGCTGGTATCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: DHQSVLHEVFQVRKS*PQVWSPQAMLVSQL
Trigger: CAGCTGAGATACCAGCATGGCCTGGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTGAAAAACTTCATGGAGCACGGACTGATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp CATCTTGAGGAAGCAGGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGAGTTTTGTGTCAACTTaGCACAGCTGGAGCTTCAGT +
Preference number: 2 (lower is better)
Translates to: HLEEAGQQRGLQADYGSQSFVST*HSWSFS
Trigger: ACTGAAGCTCCAGCTGTGTCAAGTTGACACAAAACT...CTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCCTGCTTCCTCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR-3UTR TCA 90 bp GGAGCTTTGTCTCTTCGGGACAGGGATGGCATTGGAGATGTGATGTCTGTCACTGACAACTGGCTGTCCTaGCAGTGTTCCCATCTCAGT +
Preference number: 2 (lower is better)
Translates to: GALSLRDRDGIGDVMSVTDNWLS*QCSHLS
Trigger: ACTGAGATGGGAACACTGTCAGGACAGCCAGTTGTC...AGTGACAGACATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp ATCAAGGGGGAAAGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGCCTTTACGAGGAATCTaGTCCACTGACATCATTTGT +
Preference number: 2 (lower is better)
Translates to: IKGERPLVGGTISGLVVLPLRGI*STDIIC
Trigger: ACAAATGATGTCAGTGGAGCAGATTCCTCGTAAAGG...CAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR-3UTR GCA 90 bp CTTAACCCAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCCCCCATCTTTCAGGATaGATGGCCCATCTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: LNPTISTVSWSAHWASCLPHLSG*MAHLEE
Trigger: TTCCTCAAGATGGGCCATGCATCCTGAAAGATGGGG...GAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTGGGTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp GTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCACATGGAGACCAAATGTaGAGTGTAACCAAGGGCGAC +
Preference number: 2 (lower is better)
Translates to: VLRAEGPEQRPSHCFLFSHGDQM*SVTKGD
Trigger: GTCGCCCTTGGTTACACTGCACATTTGGTCTCCATG...TGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp GTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAAGGTTAGGAAGAGTTTaGCTCAAGTCTGGAGTCCCC +
Preference number: 2 (lower is better)
Translates to: VLRAEGPEQRPSHCFLFSRLGRV*LKSGVP
Trigger: GGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCT...TGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp GGAGCTTTGTCTCTTCGGGACAGGGATGGCATTGGAGATGTGATGTCTGTCACTTTTCTTAGGGTCCCCTaGGGTCCACCACAGGACAAT +
Preference number: 2 (lower is better)
Translates to: GALSLRDRDGIGDVMSVTFLRVP*GPPQDN
Trigger: ATTGTCCTGTGGTGGACCCCAGGGGACCCTAAGAAA...AGTGACAGACATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp ATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATCTGCTCCGGTGGGGTTTTGTACTaGAGTCTCTCGTTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: MTLSPLSSQSQPLRGICSGGVLY*SLSFSE
Trigger: CTCAGAGAACGAGAGACTCCAGTACAAAACCCCACC...GGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp TCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAATTATTCAAAGATGAAGTaGAGCTTGGCCCCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SQGRGPGTETITLFLILNYSKMK*SLAPGR
Trigger: CCTCCCTGGGGCCAAGCTTCACTTCATCTTTGAATA...ATTGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp GGAGCTTTGTCTCTTCGGGACAGGGATGGCATTGGAGATGTGATGTCTGTCACTCAGAAAACTGCTGCTTaGCTTTGCTGCTCATGCTGG +
Preference number: 2 (lower is better)
Translates to: GALSLRDRDGIGDVMSVTQKTAA*LCCSCW
Trigger: CCAGCATGAGCAGCAAAGGCAAGCAGCAGTTTTCTG...AGTGACAGACATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp CAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATATCTTTCAGGATGCATaGCCCATCTTGAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: QLSQLSRGLHTGHPASPYIFQDA*PILRKQ
Trigger: CTGCTTCCTCAAGATGGGCCATGCATCCTGAAAGAT...ATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp CTTAACCCAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCATCTTTCAGGATGCATaGCCCATCTTGAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: LNPTISTVSWSAHWASCLIFQDA*PILRKQ
Trigger: CTGCTTCCTCAAGATGGGCCATGCATCCTGAAAGAT...GAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTGGGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp ACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATGCTTTGTCATGGAACATCATTCCTGCTaGCTTTGGACTAGTGGGTTT +
Preference number: 2 (lower is better)
Translates to: TVSWSAHWASCLSLCFVMEHHSC*LWTSGF
Trigger: AAACCCACTAGTCCAAAGCCAGCAGGAATGATGTTC...CATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp CACACTGCTGCCCAGGTCTACTCCTGCTTTCTTGTTTTCTTTGGAGAAGTCCAGGCCCCCAAAGAAATCTaGCTGCCATCTGACTGTGGT +
Preference number: 2 (lower is better)
Translates to: HTAAQVYSCFLVFFGEVQAPKEI*LPSDCG
Trigger: ACCACAGTCAGATGGCAGCCAGATTTCTTTGGGGGC...CTGGACTTCTCCAAAGAAAACAAGAAAGCAGGAGTAGACCTGGGCAGCAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp CACTGGTACCCAATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATTATTCAAAGATaGAGTGAAGCTTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: HWYPMTLSPLSSQSQPLRGIIQR*SEAWPQ
Trigger: CTGGGGCCAAGCTTCACTTCATCTTTGAATAATTCC...TCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCATTGGGTACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp TCCTGCTGGCTTTGGACTAGTGGGTTTATTGCCCCATCTTTCAGGATGCATGGCCAAGGGCGACGGCAATaGTTCCATCATCTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: SCWLWTSGFIAPSFRMHGQGRRQ*FHHLLH
Trigger: ATGCAAAAGATGATGGAAGCATTGCCGTCGCCCTTG...GCCATGCATCCTGAAAGATGGGGCAATAAACCCACTAGTCCAAAGCCAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp TCCTGCTGGCTTTGGACTAGTGGGTTTATTGCCCCATCTTTCAGGATGCATGGCCTGACCATCAGTCCGTaGTCCATGAAGTTTTTCAGG +
Preference number: 2 (lower is better)
Translates to: SCWLWTSGFIAPSFRMHGLTISP*SMKFFR
Trigger: CCTGAAAAACTTCATGGAGCACGGACTGATGGTCAG...GCCATGCATCCTGAAAGATGGGGCAATAAACCCACTAGTCCAAAGCCAGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp CAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATGGAAGAAGGAGATCATaGAGACCAAATGTGCAGTGT +
Preference number: 2 (lower is better)
Translates to: QLSQLSRGLHTGHPASPYGRRRS*RPNVQC
Trigger: ACACTGCACATTTGGTCTCCATGATCTCCTTCTTCC...ATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp GAGACCATCACACTGTTTCTTATTCTCAATCTAAAGGATGGGTACAGGCCTCTCTGGCTTCCAGCCCGATaGTTTCCTCTGCTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: ETITLFLILNLKDGYRPLWLPAR*FPLLAP
Trigger: TGGAGCAAGCAGAGGAAATCATCGGGCTGGAAGCCA...GAGAGGCCTGTACCCATCCTTTAGATTGAGAATAAGAAACAGTGTGATGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp CAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATCATCTAGCAATATGGTaGCTGTACTGGCTAGTTTTG +
Preference number: 2 (lower is better)
Translates to: QLSQLSRGLHTGHPASPYHLAIW*LYWLVL
Trigger: CAAAACTAGCCAGTACAGCCACCATATTGCTAGATG...ATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR-3UTR TCA 90 bp GAGACCATCACACTGTTTCTTATTCTCAATCTAAAGGATGGGTACAGGCCTCTCGGACCCAGCACCCTCTaGTGCAGACAGGACAAAATA +
Preference number: 2 (lower is better)
Translates to: ETITLFLILNLKDGYRPLGPSTL*CRQDKI
Trigger: TATTTTGTCCTGTCTGCATCAGAGGGTGCTGGGTCC...GAGAGGCCTGTACCCATCCTTTAGATTGAGAATAAGAAACAGTGTGATGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAAGCAAAAGCACCCATTTaGAGGAGGGCTGTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQAKAPI*RRAVCC
Trigger: ACAGCAGACAGCCCTCCTGCAAATGGGTGCTTTTGC...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR-3UTR CCA 90 bp ACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATGCTTTGTCATGCAGGCCTCTCAAGGGTaGAAAGTTATTTTTGAATAT +
Preference number: 2 (lower is better)
Translates to: TVSWSAHWASCLSLCFVMQASQG*KVIFEY
Trigger: ATATTCAAAAATAACTTTCCACCCTTGAGAGGCCTG...CATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp CAGTTACTACCCGGAAGGCAGATTCTATGTACTTCTAGCTGGGAAAGTACAGAATCTGCAGCTGGAGCTTaGCATGCTCAGTGGAAAATG +
Preference number: 2 (lower is better)
Translates to: QLLPGRQILCTSSWESTESAAGA*HAQWKM
Trigger: CATTTTCCACTGAGCATGGCAAGCTCCAGCTGCAGA...TTCTGTACTTTCCCAGCTAGAAGTACATAGAATCTGCCTTCCGGGTAGTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR-3UTR TCA 90 bp TCTGTCTTTCCAGTTCATTTCGAAGCACCAAAATTTTCAATCGCAGACATTCACGCACACTGGGCTCTATaGAGCCGCAGCAAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: SVFPVHFEAPKFSIADIHAHWAL*SRSKEK
Trigger: CTTCTCTTTGCTGCGGCTTCATAGAGCCCAGTGTGC...GTGAATGTCTGCGATTGAAAATTTTGGTGCTTCGAAATGAACTGGAAAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR-3UTR GCA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAAACAGAACATCATTCCTaGTGGCTTTGGACTAGTGGG +
Preference number: 2 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQTEHHS*WLWTSG
Trigger: CCCACTAGTCCAAAGCCAGCAGGAATGATGTTCTGT...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp TCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAATCAGGCCTCTCAAGGGTaGAAAGTTATTTTTGAATAT +
Preference number: 2 (lower is better)
Translates to: SQGRGPGTETITLFLILNQASQG*KVIFEY
Trigger: ATATTCAAAAATAACTTTCCACCCTTGAGAGGCCTG...ATTGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR TCA 90 bp GAGACCATCACACTGTTTCTTATTCTCAATCTAAAGGATGGGTACAGGCCTCTCGGAATTATTCAAAGATaGAGTGAAGCTTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: ETITLFLILNLKDGYRPLGIIQR*SEAWPQ
Trigger: CTGGGGCCAAGCTTCACTTCATCTTTGAATAATTCC...GAGAGGCCTGTACCCATCCTTTAGATTGAGAATAAGAAACAGTGTGATGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CCA 90 bp GAGACCATCACACTGTTTCTTATTCTCAATCTAAAGGATGGGTACAGGCCTCTCTCCCTTTGGATACAGTaGAAACTCTCGCTCCTTTTC +
Preference number: 2 (lower is better)
Translates to: ETITLFLILNLKDGYRPLSLWIQ*KLSLLF
Trigger: GAAAAGGAGCGAGAGTTTCCACTGTATCCAAAGGGA...GAGAGGCCTGTACCCATCCTTTAGATTGAGAATAAGAAACAGTGTGATGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp GAGACCATCACACTGTTTCTTATTCTCAATCTAAAGGATGGGTACAGGCCTCTCTTTCGCCTGATAAAATaGAGCTGCCAGAAAACTGCT +
Preference number: 2 (lower is better)
Translates to: ETITLFLILNLKDGYRPLFRLIK*SCQKTA
Trigger: AGCAGTTTTCTGGCAGCTGCATTTTATCAGGCGAAA...GAGAGGCCTGTACCCATCCTTTAGATTGAGAATAAGAAACAGTGTGATGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CAA 90 bp CTTAGAAACATAATTGAACATCGTGACGTTGCACACAGCTATGCTTaGTCTAGTCTCTTAACCCAACTATCTCAACTGTCTCGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: LRNIIEHRDVAHSYA*SSLLTQLSQLSRGL
Trigger: CAGACCACGAGACAGTTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACGATGTTCAATTATGTTTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR GCA 90 bp TTCTTCAATTTCCTTTCCAAGTCTCTGAACAGTTACCTGAGTCTGTTTAATTGCAAGGAGGTTCTTCTGTaGGTTTGGATGACCCTTGTG +
Preference number: 2 (lower is better)
Translates to: FFNFLSKSLNSYLSLFNCKEVLL*VWMTLV
Trigger: CACAAGGGTCATCCAAACGCACAGAAGAACCTCCTT...GCAATTAAACAGACTCAGGTAACTGTTCAGAGACTTGGAAAGGAAATTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR-3UTR GCA 90 bp CCCGGAAGGCAGATTCTATGTACTTCTAGCTGGGAAAGTACAGAAATTCTAAAAAGACATCGTAAGAATTaGGAACACAGTTCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: PGRQILCTSSWESTEILKRHRKN*EHSSGP
Trigger: TGGACCAGAACTGTGTTCGCAATTCTTACGATGTCT...TTTTAGAATTTCTGTACTTTCCCAGCTAGAAGTACATAGAATCTGCCTTCCGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR-3UTR GCA 90 bp TCTGTCTTTCCAGTTCATTTCGAAGCACCAAAATTTTCAATCGCAGACATTCACCTGAGTCTGTTTAATTaGACACTGGGCTCTATGAAG +
Preference number: 2 (lower is better)
Translates to: SVFPVHFEAPKFSIADIHLSLFN*TLGSMK
Trigger: CTTCATAGAGCCCAGTGTGCAATTAAACAGACTCAG...GTGAATGTCTGCGATTGAAAATTTTGGTGCTTCGAAATGAACTGGAAAGACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR GCA 72 bp CACGAGCCTGGCAGCAGGGTGCCGGCAGGGCCAGCCTaGTCGCTGGGCAGTGCAGTGCCATTCACGGCTGCC +
Preference number: 3 (lower is better)
Translates to: HEPGSRVPAGPA*SLGSAVPFTAA
Trigger: GGCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCAGGCTGGCCCTGCCGGCACCCTGCTGCCAGGCTCGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CCAGGGAGGGCAGCGGCTCTCCCTGGTCCTACGGTCTaGCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTCAC +
Preference number: 3 (lower is better)
Translates to: PGRAAALPGPTV*LPACLPACLPH
Trigger: GTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGACCAGGGAGAGCCGCTGCCCTCCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp CTGGCAGCAGGGTGCCGGCAGGGCCAGCCTGCTCGCTaGGCAGTGCAGTGCCATTCACGGCTGCCAGGTGCC +
Preference number: 3 (lower is better)
Translates to: LAAGCRQGQPAR*AVQCHSRLPGA
Trigger: GGCACCTGGCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCAGGCTGGCCCTGCCGGCACCCTGCTGCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CTACGGTCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTaGCTCACTTGTCGGAACTCCTGCGAGGCCGGCGGA +
Preference number: 3 (lower is better)
Translates to: LRSACLPACLPA*LTCRNSCEAGG
Trigger: TCCGCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp GGTCCTACGGTCTGCCTGCCTGCCTGCCTGCCTGCCTaGCTGCCTCACTTGTCGGAACTCCTGCGAGGCCGG +
Preference number: 3 (lower is better)
Translates to: GPTVCLPACLPA*LPHLSELLRGR
Trigger: CCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACCGTAGGACC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp TTCACGGCTGCCAGGTGCCCAGGCAGGGCTTCCCCCTaGTCTTGGCCGGAGTCCGAGTTTCCGTGGTCTCCG +
Preference number: 3 (lower is better)
Translates to: FTAARCPGRASP*SWPESEFPWSP
Trigger: CGGAGACCACGGAAACTCGGACTCCGGCCAAGAGCAGGGGGAAGCCCTGCCTGGGCACCTGGCAGCCGTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CTCCCCCAGCACCTGCTCGTCACACTCCACTGCCACTaGGCTGTCCACCGGGATGCAGCTGAGCGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: LPQHLLVTLHCH*AVHRDAAERLQ
Trigger: CTGGAGGCGCTCAGCTGCATCCCGGTGGACAGCGCAGTGGCAGTGGAGTGTGACGAGCAGGTGCTGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp GCTGCCAGGTGCCCAGGCAGGGCTTCCCCCTGCTCTTaGCCGGAGTCCGAGTTTCCGTGGTCTCCGCTCACA +
Preference number: 3 (lower is better)
Translates to: AARCPGRASPCS*PESEFPWSPLT
Trigger: TGTGAGCGGAGACCACGGAAACTCGGACTCCGGCCAAGAGCAGGGGGAAGCCCTGCCTGGGCACCTGGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CTCAAACTCCCCCAGCACCTGCTCGTCACACTCCACTaGCACTGCGCTGTCCACCGGGATGCAGCTGAGCGC +
Preference number: 3 (lower is better)
Translates to: LKLPQHLLVTLH*HCAVHRDAAER
Trigger: GCGCTCAGCTGCATCCCGGTGGACAGCGCAGTGGCAGTGGAGTGTGACGAGCAGGTGCTGGGGGAGTTTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp CAGGATGCATGGCCCATCTTGAGGAAGCAGGGCAACAGCGGGGTCTGCAGGCTGGATGCATGGCCCATCTaGAGGAAGCAGGGCAACAGC +
Preference number: 3 (lower is better)
Translates to: QDAWPILRKQGNSGVCRLDAWPI*RKQGNS
Trigger: GCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCATC...CAGCCTGCAGACCCCGCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp TGCTCGCTGGGCAGTGCAGTGCCATTCACGGCTGCCAGGTGCCCAGGCAGGGCTGGACTAGTGGGTTTATaGCCCCATCTTTCAGGATGC +
Preference number: 3 (lower is better)
Translates to: CSLGSAVPFTAARCPGRAGLVGL*PHLSGC
Trigger: GCATCCTGAAAGATGGGGCAATAAACCCACTAGTCC...AGCCCTGCCTGGGCACCTGGCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp AAGCCTGTGGCTTCCAGCCCGATGATTTCCTCTGCTTaGTCCACTGCACAGCAGAGCTCAGCTGAGGGGGCC +
Preference number: 3 (lower is better)
Translates to: KPVASSPMISSA*STAQQSSAEGA
Trigger: GGCCCCCTCAGCTGAGCTCTGCTGTGCAGTGGAGCAAGCAGAGGAAATCATCGGGCTGGAAGCCACAGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp ATCCTGCGAGAGAACTCCTCAAACTCCCCCAGCACCTaGTCGTCACACTCCACTGCCACTGCGCTGTCCACC +
Preference number: 3 (lower is better)
Translates to: ILRENSSNSPST*SSHSTATALST
Trigger: GGTGGACAGCGCAGTGGCAGTGGAGTGTGACGAGCAGGTGCTGGGGGAGTTTGAGGAGTTCTCTCGCAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp GGGCGACCTTTCTCTCAGAGTCTCCCGAGGTGGGCATaGCCACCCCGGGCTGTGTCAATGCTGAATTGTAGC +
Preference number: 3 (lower is better)
Translates to: GRPFSQSLPRWA*PPRAVSMLNCS
Trigger: GCTACAATTCAGCATTGACACAGCCCGGGGTGGCCATGCCCACCTCGGGAGACTCTGAGAGAAAGGTCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp TCCTGCGAGGCCGGCGGAAGCTGGACACGTTCTCGCTaGGGGCATAGATCCTGCGAGAGAACTCCTCAAACT +
Preference number: 3 (lower is better)
Translates to: SCEAGGSWTRSR*GHRSCERTPQT
Trigger: AGTTTGAGGAGTTCTCTCGCAGGATCTATGCCCTCAGCGAGAACGTGTCCAGCTTCCGCCGGCCTCGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp CTGCCTGCCTGCCTGCCTGCCTGCCTGCCTCACTTGTCGGAACTCCTGCGAGGCTTCCCATCTCAGTATTaGGTGGCTACTTTTCATACC +
Preference number: 3 (lower is better)
Translates to: LPACLPACLPHLSELLRGFPSQY*VATFHT
Trigger: GGTATGAAAAGTAGCCACCAAATACTGAGATGGGAA...GCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp AGGTCACATGGGACTCTCCTGTCACCTGCACCAGACTaGCCTTCAAACACCTGGAGACGCCACCTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: RSHGTLLSPAPD*PSNTWRRHLSP
Trigger: TGGGGAGAGGTGGCGTCTCCAGGTGTTTGAAGGTCAGTCTGGTGCAGGTGACAGGAGAGTCCCATGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CCA 72 bp CAAGGGGGAAAGGCCCCTTGTGGGTGGGACCATCTCTaGGCTGGTAGTCTTGGGTTCTATAAGGAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: QGGKAPCGWDHL*AGSLGFYKEAG
Trigger: GCCTGCTTCCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CCA 72 bp TACCCGCAGAGAAGCCTCCATCTGCACCCCCAAACGTaGAGCTTTGTCTCTTCGGGACAGGGATGGCATTGG +
Preference number: 3 (lower is better)
Translates to: YPQRSLHLHPQT*SFVSSGQGWHW
Trigger: CCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCCACGTTTGGGGGTGCAGATGGAGGCTTCTCTGCGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp GCTGGTTACTCAGGCCTGACACAGACACAGGGGCCTTaGCAACTGGCTGTCCTGACAGTGTTCCCATCTCAG +
Preference number: 3 (lower is better)
Translates to: AGYSGLTQTQGP*QLAVLTVFPSQ
Trigger: CTGAGATGGGAACACTGTCAGGACAGCCAGTTGTCAAGGCCCCTGTGTCTGTGTCAGGCCTGAGTAACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp TGCTTGCCTTTGCTGCTCATGCTGGTTACTCAGGCCTaGCACAGACACAGGGGCCTTGACAACTGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: CLPLLLMLVTQA*HRHRGLDNWLS
Trigger: GGACAGCCAGTTGTCAAGGCCCCTGTGTCTGTGTCAGGCCTGAGTAACCAGCATGAGCAGCAAAGGCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp GCACTTCCTTTGTCCTGTAGAGCCATCTGTTGCTTATaGAGGAAGGCCACCTCCCGCCCCAGCGCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: ALPLSCRAICCL*RKATSRPSAFF
Trigger: GAAGAAAGCGCTGGGGCGGGAGGTGGCCTTCCTGCATAAGCAACAGATGGCTCTACAGGACAAAGGAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR GCA 72 bp AGCTGCCAGAAAACTGCTGCTTGCCTTTGCTGCTCATaGTGGTTACTCAGGCCTGACACAGACACAGGGGCC +
Preference number: 3 (lower is better)
Translates to: SCQKTAACLCCS*WLLRPDTDTGA
Trigger: GGCCCCTGTGTCTGTGTCAGGCCTGAGTAACCAGCATGAGCAGCAAAGGCAAGCAGCAGTTTTCTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp TCTGCATGGAGCCTCAGGTGGCAATCACAGGTCACATaGGACTCTCCTGTCACCTGCACCAGACTGACCTTC +
Preference number: 3 (lower is better)
Translates to: SAWSLRWQSQVT*DSPVTCTRLTF
Trigger: GAAGGTCAGTCTGGTGCAGGTGACAGGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCTCCATGCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR-3UTR CAA 90 bp CTTAACCCAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCGATGCATGGCCCATCTaGAGGAAGCAGGGCAACAGC +
Preference number: 3 (lower is better)
Translates to: LNPTISTVSWSAHWASCLDAWPI*RKQGNS
Trigger: GCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCATC...GAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTGGGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR GCA 72 bp TGGCAATCACAGGTCACATGGGACTCTCCTGTCACCTaGACCAGACTGACCTTCAAACACCTGGAGACGCCA +
Preference number: 3 (lower is better)
Translates to: WQSQVTWDSPVT*TRLTFKHLETP
Trigger: TGGCGTCTCCAGGTGTTTGAAGGTCAGTCTGGTGCAGGTGACAGGAGAGTCCCATGTGACCTGTGATTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR GCA 72 bp AGGGTCAGGGTCAGGGGACTAGAACGTGTGTACATCTaGATGGAGCCTCAGGTGGCAATCACAGGTCACATG +
Preference number: 3 (lower is better)
Translates to: RVRVRGLERVYI*MEPQVAITGHM
Trigger: CATGTGACCTGTGATTGCCACCTGAGGCTCCATGCAGATGTACACACGTTCTAGTCCCCTGACCCTGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR GCA 72 bp TGTACTGGAGTCTCTCGTTCTCTGAGCTGGCCCGCTTaGGATGGACTTTATCTGGTGATGGGATACCCGCAG +
Preference number: 3 (lower is better)
Translates to: CTGVSRSLSWPA*DGLYLVMGYPQ
Trigger: CTGCGGGTATCCCATCACCAGATAAAGTCCATCGCAAGCGGGCCAGCTCAGAGAACGAGAGACTCCAGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CGGAGTCCGAGTTTCCGTGGTCTCCGCTCACACTGCTaGCCAGGTCTACTCCTGCTTTCTTGTTTTCTTTGG +
Preference number: 3 (lower is better)
Translates to: RSPSFRGLRSHC*PGLLLLSCFLW
Trigger: CCAAAGAAAACAAGAAAGCAGGAGTAGACCTGGGCAGCAGTGTGAGCGGAGACCACGGAAACTCGGACTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp TGGAGTCTCTCGTTCTCTGAGCTGGCCCGCTTGCGATaGACTTTATCTGGTGATGGGATACCCGCAGAGAAG +
Preference number: 3 (lower is better)
Translates to: WSLSFSELARLR*TLSGDGIPAEK
Trigger: CTTCTCTGCGGGTATCCCATCACCAGATAAAGTCCATCGCAAGCGGGCCAGCTCAGAGAACGAGAGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTaGTTGAGTTCCAGTCCTGACTTCCTTGGTGACAAA +
Preference number: 3 (lower is better)
Translates to: LHGLCISSCFLT*LSSSPDFLGDK
Trigger: TTTGTCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CCA 72 bp GTGGGGTTTTGTACTGGAGTCTCTCGTTCTCTGAGCTaGCCCGCTTGCGATGGACTTTATCTGGTGATGGGA +
Preference number: 3 (lower is better)
Translates to: VGFCTGVSRSLS*PACDGLYLVMG
Trigger: TCCCATCACCAGATAAAGTCCATCGCAAGCGGGCCAGCTCAGAGAACGAGAGACTCCAGTACAAAACCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp CACACTGCTGCCCAGGTCTACTCCTGCTTTCTTGTTTTCTTTGGAGAAGTCCAGACAGACACAGGGGCCTaGACAACTGGCTGTCCTGAC +
Preference number: 3 (lower is better)
Translates to: HTAAQVYSCFLVFFGEVQTDTGA*TTGCPD
Trigger: GTCAGGACAGCCAGTTGTCAAGGCCCCTGTGTCTGT...CTGGACTTCTCCAAAGAAAACAAGAAAGCAGGAGTAGACCTGGGCAGCAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp TGGGCTGGTAGTCTTGGGTTCTATAAGGAAGCAGGCTaGGCAAGCCAGGGGAAGCAAGCCAGTAAGGAACAT +
Preference number: 3 (lower is better)
Translates to: WAGSLGFYKEAG*ASQGKQASKEH
Trigger: ATGTTCCTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCCTGCTTCCTTATAGAACCCAAGACTACCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR GCA 72 bp AGACCAAATGTGCAGTGTAACCAAGGGCGACGGCAATaGTTCCATCATCTTTTGCATCCCGCCTTCCCAGTC +
Preference number: 3 (lower is better)
Translates to: RPNVQCNQGRRQ*FHHLLHPAFPV
Trigger: GACTGGGAAGGCGGGATGCAAAAGATGATGGAAGCATTGCCGTCGCCCTTGGTTACACTGCACATTTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CGCCTGATAAAATGCAGCTGCCAGAAAACTGCTGCTTaGCTTTGCTGCTCATGCTGGTTACTCAGGCCTGAC +
Preference number: 3 (lower is better)
Translates to: RLIKCSCQKTAA*LCCSCWLLRPD
Trigger: GTCAGGCCTGAGTAACCAGCATGAGCAGCAAAGGCAAGCAGCAGTTTTCTGGCAGCTGCATTTTATCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp CAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATGGACTAGTGGGTTTATaGCCCCATCTTTCAGGATGC +
Preference number: 3 (lower is better)
Translates to: QLSQLSRGLHTGHPASPYGLVGL*PHLSGC
Trigger: GCATCCTGAAAGATGGGGCAATAAACCCACTAGTCC...ATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp TCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAATGCTTCTCCCCTCCCTTaGGATACAGTGGAAACTCTC +
Preference number: 3 (lower is better)
Translates to: SQGRGPGTETITLFLILNASPLP*DTVETL
Trigger: GAGAGTTTCCACTGTATCCAAAGGGAGGGGAGAAGC...ATTGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp TCCACTGACATCATTTGTGTCGGAATTATTCAAAGATaGAGTGAAGCTTGGCCCCAGGGAGGGCAGCGGCTC +
Preference number: 3 (lower is better)
Translates to: STDIICVGIIQR*SEAWPQGGQRL
Trigger: GAGCCGCTGCCCTCCCTGGGGCCAAGCTTCACTTCATCTTTGAATAATTCCGACACAAATGATGTCAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR GCA 72 bp TCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATaGTTTGTCATGTATAATGGCTTCCTTCTGACGGAA +
Preference number: 3 (lower is better)
Translates to: SWSAHWASCLSL*FVMYNGFLLTE
Trigger: TTCCGTCAGAAGGAAGCCATTATACATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR GCA 72 bp GGAAGAGTTTGCCTCAAGTCTGGAGTCCCCAGGCCATaGTGGTATCTCAGCTGTGCTATGTTCTTGTTCAGA +
Preference number: 3 (lower is better)
Translates to: GRVCLKSGVPRP*WYLSCAMFLFR
Trigger: TCTGAACAAGAACATAGCACAGCTGAGATACCAGCATGGCCTGGGGACTCCAGACTTGAGGCAAACTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CCGTGCTCCATGAAGTTTTTCAGGTTAGGAAGAGTTTaGCTCAAGTCTGGAGTCCCCAGGCCATGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: PCSMKFFRLGRV*LKSGVPRPCWY
Trigger: ATACCAGCATGGCCTGGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTGAAAAACTTCATGGAGCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp AAATGCAGCTGCCAGAAAACTGCTGCTTGCCTTTGCTaGTCATGCTGGTTACTCAGGCCTGACACAGACACA +
Preference number: 3 (lower is better)
Translates to: KCSCQKTAACLC*SCWLLRPDTDT
Trigger: TGTGTCTGTGTCAGGCCTGAGTAACCAGCATGAGCAGCAAAGGCAAGCAGCAGTTTTCTGGCAGCTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CTTTCGCCTGATAAAATGCAGCTGCCAGAAAACTGCTaGTTGCCTTTGCTGCTCATGCTGGTTACTCAGGCC +
Preference number: 3 (lower is better)
Translates to: LSPDKMQLPENC*LPLLLMLVTQA
Trigger: GGCCTGAGTAACCAGCATGAGCAGCAAAGGCAAGCAGCAGTTTTCTGGCAGCTGCATTTTATCAGGCGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp AGAGTTTGCCTCAAGTCTGGAGTCCCCAGGCCATGCTaGTATCTCAGCTGTGCTATGTTCTTGTTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: RVCLKSGVPRPC*YLSCAMFLFRR
Trigger: CCTTCTGAACAAGAACATAGCACAGCTGAGATACCAGCATGGCCTGGGGACTCCAGACTTGAGGCAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp GAAGTTTTTCAGGTTAGGAAGAGTTTGCCTCAAGTCTaGAGTCCCCAGGCCATGCTGGTATCTCAGCTGTGC +
Preference number: 3 (lower is better)
Translates to: EVFQVRKSLPQV*SPQAMLVSQLC
Trigger: GCACAGCTGAGATACCAGCATGGCCTGGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTGAAAAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp CCCCAAACGTGGAGCTTTGTCTCTTCGGGACAGGGATaGCATTGGAGATGTGATGTCTGTCACTGTTTCCTT +
Preference number: 3 (lower is better)
Translates to: PQTWSFVSSGQG*HWRCDVCHCFL
Trigger: AAGGAAACAGTGACAGACATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCCACGTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp GTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCATTGAACATCGTGACGTaGCACACAGCTATGCTTTGT +
Preference number: 3 (lower is better)
Translates to: VLRAEGPEQRPSHCFLFSLNIVT*HTAMLC
Trigger: ACAAAGCATAGCTGTGTGCAACGTCACGATGTTCAA...TGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp CAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATTTGAACATCGTGACGTaGCACACAGCTATGCTTTGT +
Preference number: 3 (lower is better)
Translates to: QLSQLSRGLHTGHPASPYLNIVT*HTAMLC
Trigger: ACAAAGCATAGCTGTGTGCAACGTCACGATGTTCAA...ATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp GTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCACTGTACTGGCTAGTTTaGTGTCAACTTGACACAGCT +
Preference number: 3 (lower is better)
Translates to: VLRAEGPEQRPSHCFLFSLYWLV*CQLDTA
Trigger: AGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAG...TGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR GCA 72 bp ATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTaGCTCTCCCTATGCTTTGTCATGTATAATGGCTTC +
Preference number: 3 (lower is better)
Translates to: ISTVSWSAHWAS*LSLCFVMYNGF
Trigger: GAAGCCATTATACATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR GCA 72 bp ATAAAATGCAGCTGCCAGAAAACTGCTGCTTGCCTTTaGTGCTCATGCTGGTTACTCAGGCCTGACACAGAC +
Preference number: 3 (lower is better)
Translates to: IKCSCQKTAACL*CSCWLLRPDTD
Trigger: GTCTGTGTCAGGCCTGAGTAACCAGCATGAGCAGCAAAGGCAAGCAGCAGTTTTCTGGCAGCTGCATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp AACCCAACTATCTCAACTGTCTCGTGGTCTGCACACTaGGCATCCTGCCTCTCCCTATGCTTTGTCATGTAT +
Preference number: 3 (lower is better)
Translates to: NPTISTVSWSAH*ASCLSLCFVMY
Trigger: ATACATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR CCA 72 bp GTCAAACTGCAGCTTCTCCCCTCCCTTTGGATACAGTaGAAACTCTCGCTCCTTTTCTGTCAGCTTGTCGTT +
Preference number: 3 (lower is better)
Translates to: VKLQLLPSLWIQ*KLSLLFCQLVV
Trigger: AACGACAAGCTGACAGAAAAGGAGCGAGAGTTTCCACTGTATCCAAAGGGAGGGGAGAAGCTGCAGTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp GTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAGAGGTGTGCCCAATTTaGGACCACATAAAAACTTTG +
Preference number: 3 (lower is better)
Translates to: VLRAEGPEQRPSHCFLFSEVCPI*DHIKTL
Trigger: CAAAGTTTTTATGTGGTCCAAAATTGGGCACACCTC...TGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR GCA 72 bp TTCCTTTCGCCTGATAAAATGCAGCTGCCAGAAAACTaGTGCTTGCCTTTGCTGCTCATGCTGGTTACTCAG +
Preference number: 3 (lower is better)
Translates to: FLSPDKMQLPEN*CLPLLLMLVTQ
Trigger: CTGAGTAACCAGCATGAGCAGCAAAGGCAAGCAGCAGTTTTCTGGCAGCTGCATTTTATCAGGCGAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CCA 72 bp CTGGGGTCCACCACAGGACAATTTTTCATGAGGGTATaGCACACTAGACAGAGACAGAACATCATTCCTGCT +
Preference number: 3 (lower is better)
Translates to: LGSTTGQFFMRV*HTRQRQNIIPA
Trigger: AGCAGGAATGATGTTCTGTCTCTGTCTAGTGTGCCATACCCTCATGAAAAATTGTCCTGTGGTGGACCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp CACACTGCTGCCCAGGTCTACTCCTGCTTTCTTGTTTTCTTTGGAGAAGTCCAGGACCACATAAAAACTTaGGCCCCCAAAGAAATCTGG +
Preference number: 3 (lower is better)
Translates to: HTAAQVYSCFLVFFGEVQDHIKT*APKEIW
Trigger: CCAGATTTCTTTGGGGGCCAAAGTTTTTATGTGGTC...CTGGACTTCTCCAAAGAAAACAAGAAAGCAGGAGTAGACCTGGGCAGCAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp TCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAATTCGTTGATGTTATCTTaGATTGTTGATCTGGACCCC +
Preference number: 3 (lower is better)
Translates to: SQGRGPGTETITLFLILNSLMLS*IVDLDP
Trigger: GGGGTCCAGATCAACAATCAAAGATAACATCAACGA...ATTGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp CACATAAAAACTTTGGCCCCCAAAGAAATCTGGCTGCCATCTGACTGTGGTAAACAGGTTAGGAAGAGTTaGCCTCAAGTCTGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: HIKTLAPKEIWLPSDCGKQVRKS*PQVWSP
Trigger: GGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTG...TTTACCACAGTCAGATGGCAGCCAGATTTCTTTGGGGGCCAAAGTTTTTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp CAGTTACTACCCGGAAGGCAGATTCTATGTACTTCTAGCTGGGAAAGTACAGAATCCACAGCCAAAGGATaGGTGATGAGGGTGGATATC +
Preference number: 3 (lower is better)
Translates to: QLLPGRQILCTSSWESTESTAKG*VMRVDI
Trigger: GATATCCACCCTCATCACCAATCCTTTGGCTGTGGA...TTCTGTACTTTCCCAGCTAGAAGTACATAGAATCTGCCTTCCGGGTAGTAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR CCA 72 bp ATTAGACATAAACATGCAAAGCAAACATCTTCAATCTaGATCAGACTTGCAGGCGGAGGAGAAGGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: IRHKHAKQTSSI*IRLAGGGEGSP
Trigger: GGGGCTGCCTTCTCCTCCGCCTGCAAGTCTGATCCAGATTGAAGATGTTTGCTTTGCATGTTTATGTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp TTGTTGATCTGGACCCCTTGTGAATTATGGGATACCTaGGGGGTACTTGTAGGAAGAAGGAGATCATGGAGA +
Preference number: 3 (lower is better)
Translates to: LLIWTPCELWDT*GVLVGRRRSWR
Trigger: TCTCCATGATCTCCTTCTTCCTACAAGTACCCCTCAGGTATCCCATAATTCACAAGGGGTCCAGATCAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR GCA 72 bp CCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATCTaGTCCACTGACATCATTTGTGTCGGAATTATTCAA +
Preference number: 3 (lower is better)
Translates to: PLSSQSQPLRGI*STDIICVGIIQ
Trigger: TTGAATAATTCCGACACAAATGATGTCAGTGGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAACTGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR GCA 72 bp TCCAAGTCTCTGAACAGTTACCTGAGTCTGTTTAATTaGACACTGGGCTCTATGAAGCCGCAGCAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: SKSLNSYLSLFN*TLGSMKPQQRE
Trigger: TTCTCTTTGCTGCGGCTTCATAGAGCCCAGTGTGCAATTAAACAGACTCAGGTAACTGTTCAGAGACTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR CCA 72 bp TTGGACCACATAAAAACTTTGGCCCCCAAAGAAATCTaGCTGCCATCTGACTGTGGTAAACGTGAGGTTTCT +
Preference number: 3 (lower is better)
Translates to: LDHIKTLAPKEI*LPSDCGKREVS
Trigger: AGAAACCTCACGTTTACCACAGTCAGATGGCAGCCAGATTTCTTTGGGGGCCAAAGTTTTTATGTGGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR TCA 72 bp TTCCTTGGTGACAAACAGCAATGTGGAAATGTAAGCTaGATAAACCCTTTCCTCCCCAACTTGCTTCTTGGT +
Preference number: 3 (lower is better)
Translates to: FLGDKQQCGNVS*INPFLPNLLLG
Trigger: ACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACATTTCCACATTGCTGTTTGTCACCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR TCA 72 bp AATGGAGAGAGGAAAGACAATCAGACTTTCATTGTATaGTCTGTGCAGGCCATTAGAACTGTCCCAGACACA +
Preference number: 3 (lower is better)
Translates to: NGERKDNQTFIV*SVQAIRTVPDT
Trigger: TGTGTCTGGGACAGTTCTAATGGCCTGCACAGATCATACAATGAAAGTCTGATTGTCTTTCCTCTCTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CCA 72 bp TGTGAATTAGTTCATCTAGCAATATGGTGGCTGTACTaGCTAGTTTTGTGTCAACTTGACACAGCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: CELVHLAIWWLY*LVLCQLDTAGA
Trigger: AGCTCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAGCCACCATATTGCTAGATGAACTAATTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR TCA 72 bp TTCCCAAAGTCAGCCTTTACGAGGAATCTGCTCCACTaGCATCATTTGTGTCGGAATTATTCAAAGATGAAG +
Preference number: 3 (lower is better)
Translates to: FPKSAFTRNLLH*HHLCRNYSKMK
Trigger: CTTCATCTTTGAATAATTCCGACACAAATGATGTCAGTGGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR TCA 72 bp TTGATGTTATCTTTGATTGTTGATCTGGACCCCTTGTaGATTATGGGATACCTGAGGGGTACTTGTAGGAAG +
Preference number: 3 (lower is better)
Translates to: LMLSLIVDLDPL*IMGYLRGTCRK
Trigger: CTTCCTACAAGTACCCCTCAGGTATCCCATAATTCACAAGGGGTCCAGATCAACAATCAAAGATAACATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp TTCTGTCAGCTTGTCGTTGATGTTATCTTTGATTGTTaGTCTGGACCCCTTGTGAATTATGGGATACCTGAG +
Preference number: 3 (lower is better)
Translates to: FCQLVVDVIFDC*SGPLVNYGIPE
Trigger: CTCAGGTATCCCATAATTCACAAGGGGTCCAGATCAACAATCAAAGATAACATCAACGACAAGCTGACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp GGGTACATAATGTATAATGCAACAGCGAATGGAGTCTaGATGTGCAGGGACAATGGACTTAGAAACATAATT +
Preference number: 3 (lower is better)
Translates to: GYIMYNATANGV*MCRDNGLRNII
Trigger: AATTATGTTTCTAAGTCCATTGTCCCTGCACATTCAGACTCCATTCGCTGTTGCATTATACATTATGTACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR-3UTR CAA 90 bp ACAGTGTTCCCATCTCAGTATTTGGTGGCTACTTTTCATACCGTCTACATTTTATCTGTCAGCTTGTCGTaGATGTTATCTTTGATTGTT +
Preference number: 3 (lower is better)
Translates to: TVFPSQYLVATFHTVYILSVSLS*MLSLIV
Trigger: AACAATCAAAGATAACATCAACGACAAGCTGACAGA...TAAAATGTAGACGGTATGAAAAGTAGCCACCAAATACTGAGATGGGAACACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR TCA 72 bp TCTCCCTATGCTTTGTCATGTATAATGGCTTCCTTCTaGCGGAAAAGTAATAAGTTAACAGGATTTATATCT +
Preference number: 3 (lower is better)
Translates to: SPYALSCIMASF*RKSNKLTGFIS
Trigger: AGATATAAATCCTGTTAACTTATTACTTTTCCGTCAGAAGGAAGCCATTATACATGACAAAGCATAGGGAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR CAA 72 bp GGCTGCCAGGTGCCCAGGCAGGGCTTCCCCCTGCTCTaGGCCGGAGTCCGAGTTTCCGTGGTCTCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GCQVPRQGFPLL*AGVRVSVVSAH
Trigger: GTGAGCGGAGACCACGGAAACTCGGACTCCGGCCAAGAGCAGGGGGAAGCCCTGCCTGGGCACCTGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CAA 72 bp TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTCACTaGTCGGAACTCCTGCGAGGCCGGCGGAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: CLPACLPACLPH*SELLRGRRKLD
Trigger: GTCCAGCTTCCGCCGGCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR CCA 90 bp GGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGAGCTTCCCCCTGCTCTTaGCCGGAGTCCGAGTTTCCG +
Preference number: 4 (lower is better)
Translates to: GQQRGLQADYGSQGRGPGASPCS*PESEFP
Trigger: CGGAAACTCGGACTCCGGCCAAGAGCAGGGGGAAGC...TCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR TCA 90 bp ACGGGCAGAACCGGTCAGCTCAGAGCCACGGGGACCCATGCAAGGGTATCATGCCCACCGGGATGCAGCTaGGCGCCTCCAGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TGRTGQLRATGTHARVSCPPGCS*APPAGH
Trigger: GTGACCAGCTGGAGGCGCTCAGCTGCATCCCGGTGG...GCATGATACCCTTGCATGGGTCCCCGTGGCTCTGAGCTGACCGGTTCTGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp GGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGAGCCATCTGTTGCTTATaGAGGAAGGCCACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GQQRGLQADYGSQGRGPGAICCL*RKATSR
Trigger: GCGGGAGGTGGCCTTCCTGCATAAGCAACAGATGGC...TCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR GCA 90 bp CTGCCTGCCTGCCTGCCTGCCTGCCTGCCTCACTTGTCGGAACTCCTGCGAGGCGCCATCTGTTGCTTATaGAGGAAGGCCACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LPACLPACLPHLSELLRGAICCL*RKATSR
Trigger: GCGGGAGGTGGCCTTCCTGCATAAGCAACAGATGGC...GCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR GCA 90 bp CTGCCTGCCTGCCTGCCTGCCTGCCTGCCTCACTTGTCGGAACTCCTGCGAGGCCTCAGGGAGTCCTTCTaGAGCTGGAGCTTGCCATGC +
Preference number: 4 (lower is better)
Translates to: LPACLPACLPHLSELLRGLRESF*SWSLPC
Trigger: GCATGGCAAGCTCCAGCTGCAGAAGGACTCCCTGAG...GCCTCGCAGGAGTTCCGACAAGTGAGGCAGGCAGGCAGGCAGGCAGGCAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR GCA 90 bp ACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATGCTTTGTCATGGACGGCAGCTCCACATaGAGGGCCCGCGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TVSWSAHWASCLSLCFVMDGSST*RARAGA
Trigger: TGCCCCCGCGCGGGCCCTGCATGTGGAGCTGCCGTC...CATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR TCA 90 bp TGCATGGAGCCTCAGGTGGCAATCACAGGTCACATGGGACTCTCCTGTCACCTGCGGAGACGCCGCTGCTaGGACGGCAGCTCCACATGC +
Preference number: 4 (lower is better)
Translates to: CMEPQVAITGHMGLSCHLRRRRC*DGSSTC
Trigger: GCATGTGGAGCTGCCGTCTCAGCAGCGGCGTCTCCG...CAGGTGACAGGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCTCCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp TGCATGGAGCCTCAGGTGGCAATCACAGGTCACATGGGACTCTCCTGTCACCTGTTCACGGCTGCCAGGTaGCCAGGCAGGGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CMEPQVAITGHMGLSCHLFTAAR*PGRASP
Trigger: GGGGGAAGCCCTGCCTGGGCACCTGGCAGCCGTGAA...CAGGTGACAGGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCTCCATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp GGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGATGTAGAGCCATCTGTTaGTTATGCAGGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: GQQRGLQADYGSQGRGPGCRAIC*LCRKAT
Trigger: GGTGGCCTTCCTGCATAAGCAACAGATGGCTCTACA...TCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR GCA 90 bp GGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGATCTGCAGCTGGAGCTTaGCATGCTCAGTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: GQQRGLQADYGSQGRGPGSAAGA*HAQWKM
Trigger: CATTTTCCACTGAGCATGGCAAGCTCCAGCTGCAGA...TCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR GCA 90 bp ATCAAGGGGGAAAGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGCGCTGGGCAGTGCAGTaGCATTCACGGCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: IKGERPLVGGTISGLVVLRWAVQ*HSRLPG
Trigger: ACCTGGCAGCCGTGAATGGCACTGCACTGCCCAGCG...CAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp ATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATCTGCTCCAGCCTGGCAGCAGGGTaGCGGCAGGGCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: MTLSPLSSQSQPLRGICSSLAAG*RQGQPA
Trigger: AGCAGGCTGGCCCTGCCGGCACCCTGCTGCCAGGCT...GGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp GGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGAAAGGAGGTTCTTCTGTaGGTTTGGATGACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GQQRGLQADYGSQGRGPGKEVLL*VWMTLV
Trigger: CACAAGGGTCATCCAAACGCACAGAAGAACCTCCTT...TCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp TCCAGGGAGGAGGACAGAGGGGCGACCTTTCTCTCAGAGTCTCCCGAGGTGGGCTGTAGAGCCATCTGTTaGTTATGCAGGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: SREEDRGATFLSESPEVGCRAIC*LCRKAT
Trigger: GGTGGCCTTCCTGCATAAGCAACAGATGGCTCTACA...GCCCACCTCGGGAGACTCTGAGAGAAAGGTCGCCCCTCTGTCCTCCTCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR CCA 90 bp GGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGATCCCTTTGGATACAGTaGAAACTCTCGCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GQQRGLQADYGSQGRGPGSLWIQ*KLSLLF
Trigger: GAAAAGGAGCGAGAGTTTCCACTGTATCCAAAGGGA...TCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR TCA 90 bp GGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGACACACAAATGAAGAGTaGAGTAGGTATCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GQQRGLQADYGSQGRGPGHTNEE*SRYPEA
Trigger: AGCTTCTGGATACCTACTTCACTCTTCATTTGTGTG...TCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp CAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATCTGCTCGCTGGGCAGTaGAGTGCCATTCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLSQLSRGLHTGHPASPYLLAGQ*SAIHGC
Trigger: GCAGCCGTGAATGGCACTGCACTGCCCAGCGAGCAG...ATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp CTTAACCCAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCACTTGTCGGAACTCCTaGGAGGCCGGCGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LNPTISTVSWSAHWASCLTCRNS*EAGGSW
Trigger: CCAGCTTCCGCCGGCCTCGCAGGAGTTCCGACAAGT...GAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTGGGTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CCA 90 bp ATCAAGGGGGAAAGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGAGTCCTTCTGCAGCTaGAGCTTGCCATGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: IKGERPLVGGTISGLVVLESFCS*SLPCSV
Trigger: CACTGAGCATGGCAAGCTCCAGCTGCAGAAGGACTC...CAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CAA 72 bp CCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTaGGGTTCTATAAGGAAGCAGGCTGAGCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLVGGTISGLVV*GSIRKQAEQAR
Trigger: CCTGGCTTGCTCAGCCTGCTTCCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp ATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATCTGCTCCACACTCCACTGCCACTaGGCTGTCCACCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: MTLSPLSSQSQPLRGICSTLHCH*AVHRDA
Trigger: TGCATCCCGGTGGACAGCGCAGTGGCAGTGGAGTGT...GGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CCA 90 bp CAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGCTTCTCCCCTCCCTTTaGATACAGTGGAAACTCTCG +
Preference number: 4 (lower is better)
Translates to: QADYGSQGRGPGTETITLLLPSL*IQWKLS
Trigger: CGAGAGTTTCCACTGTATCCAAAGGGAGGGGAGAAG...CAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CCA 90 bp TCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAATGGCCAGCCTGCTCGCTaGGCAGTGCAGTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: SQGRGPGTETITLFLILNGQPAR*AVQCHS
Trigger: TGAATGGCACTGCACTGCCCAGCGAGCAGGCTGGCC...ATTGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CAA 72 bp GTTTATTGCCCCATCTTTCAGGATGCATGGCCCATCTaGAGGAAGCAGGGCAACAGCGGGGTCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VYCPIFQDAWPI*RKQGNSGVCRL
Trigger: CAGCCTGCAGACCCCGCTGTTGCCCTGCTTCCTCAAGATGGGCCATGCATCCTGAAAGATGGGGCAATAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR TCA 90 bp ACGGGCAGAACCGGTCAGCTCAGAGCCACGGGGACCCATGCAAGGGTATCATGCGAATTATGGGATACCTaGGGGGTACTTGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TGRTGQLRATGTHARVSCELWDT*GVLVGR
Trigger: TCTTCCTACAAGTACCCCTCAGGTATCCCATAATTC...GCATGATACCCTTGCATGGGTCCCCGTGGCTCTGAGCTGACCGGTTCTGCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp CTATGGTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATCTCAGGGAGTCCTTCTaGAGCTGGAGCTTGCCATGC +
Preference number: 4 (lower is better)
Translates to: LWFSGPRARNRDHHTVSYLRESF*SWSLPC
Trigger: GCATGGCAAGCTCCAGCTGCAGAAGGACTCCCTGAG...ATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAACCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR CCA 90 bp ACGGGCAGAACCGGTCAGCTCAGAGCCACGGGGACCCATGCAAGGGTATCATGCGCTTGCCATGCTCAGTaGAAAATGCACTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: TGRTGQLRATGTHARVSCACHAQ*KMHFLC
Trigger: ACAAAGGAAGTGCATTTTCCACTGAGCATGGCAAGC...GCATGATACCCTTGCATGGGTCCCCGTGGCTCTGAGCTGACCGGTTCTGCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CCA 90 bp ACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATGCTTTGTCATGCTGCACCCCCAAACGTaGAGCTTTGTCTCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: TVSWSAHWASCLSLCFVMLHPQT*SFVSSG
Trigger: TCCCGAAGAGACAAAGCTCCACGTTTGGGGGTGCAG...CATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CAA 72 bp TGCTGGTTACTCAGGCCTGACACAGACACAGGGGCCTaGACAACTGGCTGTCCTGACAGTGTTCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: CWLLRPDTDTGA*TTGCPDSVPIS
Trigger: TGAGATGGGAACACTGTCAGGACAGCCAGTTGTCAAGGCCCCTGTGTCTGTGTCAGGCCTGAGTAACCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CAA 72 bp AGAGAAGCCTCCATCTGCACCCCCAAACGTGGAGCTTaGTCTCTTCGGGACAGGGATGGCATTGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: REASICTPKRGA*SLRDRDGIGDV
Trigger: CACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCCACGTTTGGGGGTGCAGATGGAGGCTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR TCA 90 bp GTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAGCACACTGGGCTCTATaGAGCCGCAGCAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VLRAEGPEQRPSHCFLFSAHWAL*SRSKEK
Trigger: CTTCTCTTTGCTGCGGCTTCATAGAGCCCAGTGTGC...TGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR TCA 90 bp CAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATTGGCTTCCAGCCCGATaGTTTCCTCTGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QLSQLSRGLHTGHPASPYWLPAR*FPLLAP
Trigger: TGGAGCAAGCAGAGGAAATCATCGGGCTGGAAGCCA...ATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp CCCGGAAGGCAGATTCTATGTACTTCTAGCTGGGAAAGTACAGAAATTCTAAAAGACGGCAGCTCCACATaGAGGGCCCGCGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGRQILCTSSWESTEILKDGSST*RARAGA
Trigger: TGCCCCCGCGCGGGCCCTGCATGTGGAGCTGCCGTC...TTTTAGAATTTCTGTACTTTCCCAGCTAGAAGTACATAGAATCTGCCTTCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
CDS-3UTR GCA 90 bp ATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATCTGCTCCAGAGAAGCCTCCATCTaGACCCCCAAACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: MTLSPLSSQSQPLRGICSREASI*TPKRGA
Trigger: AGCTCCACGTTTGGGGGTGCAGATGGAGGCTTCTCT...GGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp TACATCTGCATGGAGCCTCAGGTGGCAATCACAGGTCACATGGGACTCTCCTGTCTGAGCTGGCCCGCTTaGGATGGACTTTATCTGGTG +
Preference number: 4 (lower is better)
Translates to: YICMEPQVAITGHMGLSCLSWPA*DGLYLV
Trigger: CACCAGATAAAGTCCATCGCAAGCGGGCCAGCTCAG...ACAGGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCTCCATGCAGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CCA 90 bp GAGACCATCACACTGTTTCTTATTCTCAATCTAAAGGATGGGTACAGGCCTCTCCTCCCGAGGTGGGCATaGCCACCCCGGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: ETITLFLILNLKDGYRPLLPRWA*PPRAVS
Trigger: TGACACAGCCCGGGGTGGCCATGCCCACCTCGGGAG...GAGAGGCCTGTACCCATCCTTTAGATTGAGAATAAGAAACAGTGTGATGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CAA 72 bp CATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTaGAGTTCCAGTCCTGACTTCCTTGGTGACAAACAG +
Preference number: 4 (lower is better)
Translates to: HGLCISSCFLTC*SSSPDFLGDKQ
Trigger: CTGTTTGTCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CAA 72 bp TTGTACTGGAGTCTCTCGTTCTCTGAGCTGGCCCGCTaGCGATGGACTTTATCTGGTGATGGGATACCCGCA +
Preference number: 4 (lower is better)
Translates to: LYWSLSFSELAR*RWTLSGDGIPA
Trigger: TGCGGGTATCCCATCACCAGATAAAGTCCATCGCAAGCGGGCCAGCTCAGAGAACGAGAGACTCCAGTACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR GCA 90 bp TCCTGCTGGCTTTGGACTAGTGGGTTTATTGCCCCATCTTTCAGGATGCATGGCCTGAGAGTAGCTGCCTaGAGCGGATGGTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: SCWLWTSGFIAPSFRMHGLRVAA*SGWSTE
Trigger: CTCAGTTGACCATCCGCTGCAGGCAGCTACTCTCAG...GCCATGCATCCTGAAAGATGGGGCAATAAACCCACTAGTCCAAAGCCAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR GCA 90 bp CACTGGTACCCAATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGACATGGAGACCAAATGTaGAGTGTAACCAAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: HWYPMTLSPLSSQSQPLRHGDQM*SVTKGD
Trigger: GTCGCCCTTGGTTACACTGCACATTTGGTCTCCATG...TCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCATTGGGTACCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp CACATAAAAACTTTGGCCCCCAAAGAAATCTGGCTGCCATCTGACTGTGGTAAACTCGTCACACTCCACTaGCACTGCGCTGTCCACCGG +
Preference number: 4 (lower is better)
Translates to: HIKTLAPKEIWLPSDCGKLVTLH*HCAVHR
Trigger: CCGGTGGACAGCGCAGTGGCAGTGGAGTGTGACGAG...TTTACCACAGTCAGATGGCAGCCAGATTTCTTTGGGGGCCAAAGTTTTTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CCA 90 bp TGCATGGAGCCTCAGGTGGCAATCACAGGTCACATGGGACTCTCCTGTCACCTGGAAAGAGTTCCCTTTTaGCAGTACACTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CMEPQVAITGHMGLSCHLERVPF*QYTPSS
Trigger: TGAGGAAGGAGTGTACTGCCAAAAGGGAACTCTTTC...CAGGTGACAGGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCTCCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR TCA 90 bp TCTGTCTTTCCAGTTCATTTCGAAGCACCAAAATTTTCAATCGCAGACATTCACCGGAGACGCCGCTGCTaGGACGGCAGCTCCACATGC +
Preference number: 4 (lower is better)
Translates to: SVFPVHFEAPKFSIADIHRRRRC*DGSSTC
Trigger: GCATGTGGAGCTGCCGTCTCAGCAGCGGCGTCTCCG...GTGAATGTCTGCGATTGAAAATTTTGGTGCTTCGAAATGAACTGGAAAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
CDS-3UTR GCA 90 bp GGAGCTTTGTCTCTTCGGGACAGGGATGGCATTGGAGATGTGATGTCTGTCACTTCTGCAGCTGGAGCTTaGCATGCTCAGTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: GALSLRDRDGIGDVMSVTSAAGA*HAQWKM
Trigger: CATTTTCCACTGAGCATGGCAAGCTCCAGCTGCAGA...AGTGACAGACATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR GCA 90 bp ATGGAGAGGGCGGATGCTTATGAGAAACTAAAGGTGAGCTCCTTCTGTTACACAGGAGTCCCCAGGCCATaGTGGTATCTCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: MERADAYEKLKVSSFCYTGVPRP*WYLSCA
Trigger: AGCACAGCTGAGATACCAGCATGGCCTGGGGACTCC...TGTGTAACAGAAGGAGCTCACCTTTAGTTTCTCATAAGCATCCGCCCTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CCA 90 bp TGCTCCATGAAGTTTTTCAGGTTAGGAAGAGTTTGCCTCAAGTCTGGAGTCCCCGAGTCCTTCTGCAGCTaGAGCTTGCCATGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: CSMKFFRLGRVCLKSGVPESFCS*SLPCSV
Trigger: CACTGAGCATGGCAAGCTCCAGCTGCAGAAGGACTC...GGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTGAAAAACTTCATGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR CCA 90 bp CAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGACACTGTTTGACATATaGACTCTCCTTTCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QADYGSQGRGPGTETITLTLFDI*TLLSKK
Trigger: TTTCTTGGAAAGGAGAGTCCATATGTCAAACAGTGT...CAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CAA 72 bp CATTCTGGTTGCGGGCATGGATCCACAGCCAAAGGATaGGTGATGAGGGTGGATATCTCTCTACCGATGTAC +
Preference number: 4 (lower is better)
Translates to: HSGCGHGSTAKG*VMRVDISLPMY
Trigger: GTACATCGGTAGAGAGATATCCACCCTCATCACCAATCCTTTGGCTGTGGATCCATGCCCGCAACCAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
3UTR CAA 72 bp TCCGTGCTCCATGAAGTTTTTCAGGTTAGGAAGAGTTaGCCTCAAGTCTGGAGTCCCCAGGCCATGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SVLHEVFQVRKS*PQVWSPQAMLV
Trigger: TACCAGCATGGCCTGGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTGAAAAACTTCATGGAGCACGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR CCA 90 bp CTATGGTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATGCTTGCCATGCTCAGTaGAAAATGCACTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LWFSGPRARNRDHHTVSYACHAQ*KMHFLC
Trigger: ACAAAGGAAGTGCATTTTCCACTGAGCATGGCAAGC...ATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAACCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR CCA 90 bp CTTAACCCAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCGGAAGAAGGAGATCATaGAGACCAAATGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LNPTISTVSWSAHWASCLGRRRS*RPNVQC
Trigger: ACACTGCACATTTGGTCTCCATGATCTCCTTCTTCC...GAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTGGGTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CCA 90 bp GTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAATGCTGAATTGTAGCTaGGAGGTGGGGTTTTGTACT +
Preference number: 4 (lower is better)
Translates to: VLRAEGPEQRPSHCFLFSMLNCS*EVGFCT
Trigger: AGTACAAAACCCCACCTCCCAGCTACAATTCAGCAT...TGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR TCA 90 bp ACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCTCCCTATGCTTTGTCATGGTTATCTTTGATTGTTaGTCTGGACCCCTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: TVSWSAHWASCLSLCFVMVIFDC*SGPLVN
Trigger: ATTCACAAGGGGTCCAGATCAACAATCAAAGATAAC...CATGACAAAGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp ATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATCTGCTCCCTGAGTCTGTTTAATTaGACACTGGGCTCTATGAAG +
Preference number: 4 (lower is better)
Translates to: MTLSPLSSQSQPLRGICSLSLFN*TLGSMK
Trigger: CTTCATAGAGCCCAGTGTGCAATTAAACAGACTCAG...GGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAACTGAGAGTAGCTGCCTaGAGCGGATGGTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQLRVAA*SGWSTE
Trigger: CTCAGTTGACCATCCGCTGCAGGCAGCTACTCTCAG...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR CAA 72 bp AACATGCAAAGCAAACATCTTCAATCTGGATCAGACTaGCAGGCGGAGGAGAAGGCAGCCCCAGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: NMQSKHLQSGSD*QAEEKAAPVNK
Trigger: TTTGTTCACTGGGGCTGCCTTCTCCTCCGCCTGCAAGTCTGATCCAGATTGAAGATGTTTGCTTTGCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR GCA 90 bp TCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAATAGACATCGTAAGAATTaGGAACACAGTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SQGRGPGTETITLFLILNRHRKN*EHSSGP
Trigger: TGGACCAGAACTGTGTTCGCAATTCTTACGATGTCT...ATTGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR TCA 90 bp TACATCTGCATGGAGCCTCAGGTGGCAATCACAGGTCACATGGGACTCTCCTGTCATTGCTTGTCGATGTaGGTCTTAGTTTTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YICMEPQVAITGHMGLSCHCLSM*VLVFLQ
Trigger: TTGAAGAAAAACTAAGACTCACATCGACAAGCAATG...ACAGGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCTCCATGCAGATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR TCA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAAATGGCATTGGAGATGTaGTGTCTGTCACACCTGACC +
Preference number: 4 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQMALEM*CLSHLT
Trigger: GGTCAGGTGTGACAGACATCACATCTCCAATGCCAT...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp GAGACCATCACACTGTTTCTTATTCTCAATCTAAAGGATGGGTACAGGCCTCTCAGGTTAGGAAGAGTTTaGCTCAAGTCTGGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: ETITLFLILNLKDGYRPLRLGRV*LKSGVP
Trigger: GGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCT...GAGAGGCCTGTACCCATCCTTTAGATTGAGAATAAGAAACAGTGTGATGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CCA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAAGGTGGGGTTTTGTACTaGAGTCTCTCGTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQGGVLY*SLSFSE
Trigger: CTCAGAGAACGAGAGACTCCAGTACAAAACCCCACC...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CAA 72 bp CAAATGGACTTCCTCAGACCAAGCAAAAGCACCCATTaGCAGGAGGGCTGTCTGCTGTGTAATAAGTCTATG +
Preference number: 4 (lower is better)
Translates to: QMDFLRPSKSTH*QEGCLLCNKSM
Trigger: CATAGACTTATTACACAGCAGACAGCCCTCCTGCAAATGGGTGCTTTTGCTTGGTCTGAGGAAGTCCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR TCA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAACACTCTATCAACAGCTaGAAGGCCTCTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQHSINS*KASSFP
Trigger: TGGAAAGGAAGAGGCCTTTCAGCTGTTGATAGAGTG...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp CACATAAAAACTTTGGCCCCCAAAGAAATCTGGCTGCCATCTGACTGTGGTAAACAAGGGCGACGGCAATaGTTCCATCATCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: HIKTLAPKEIWLPSDCGKQGRRQ*FHHLLL
Trigger: AAGCAAAAGATGATGGAAGCATTGCCGTCGCCCTTG...TTTACCACAGTCAGATGGCAGCCAGATTTCTTTGGGGGCCAAAGTTTTTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR GCA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAACTGACCATCAGTCCGTaGTCCATGAAGTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQLTISP*SMKFFR
Trigger: CCTGAAAAACTTCATGGAGCACGGACTGATGGTCAG...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
3UTR CAA 72 bp AGTGGAAACTCTCGCTCCTTTTCTGTCAGCTTGTCGTaGATGTTATCTTTGATTGTTGATCTGGACCCCTTG +
Preference number: 4 (lower is better)
Translates to: SGNSRSFSVSLS*MLSLIVDLDPL
Trigger: CAAGGGGTCCAGATCAACAATCAAAGATAACATCAACGACAAGCTGACAGAAAAGGAGCGAGAGTTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
3UTR CAA 72 bp CAACTGGCTGTCCTGACAGTGTTCCCATCTCAGTATTaGGTGGCTACTTTTCATACCGTCTACATTTTATTG +
Preference number: 4 (lower is better)
Translates to: QLAVLTVFPSQY*VATFHTVYILL
Trigger: CAATAAAATGTAGACGGTATGAAAAGTAGCCACCAAATACTGAGATGGGAACACTGTCAGGACAGCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR TCA 90 bp CCCGGAAGGCAGATTCTATGTACTTCTAGCTGGGAAAGTACAGAAATTCTAAAACACACAAATGAAGAGTaGAGTAGGTATCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PGRQILCTSSWESTEILKHTNEE*SRYPEA
Trigger: AGCTTCTGGATACCTACTTCACTCTTCATTTGTGTG...TTTTAGAATTTCTGTACTTTCCCAGCTAGAAGTACATAGAATCTGCCTTCCGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208992.2
CDS-3UTR TCA 90 bp CACATAAAAACTTTGGCCCCCAAAGAAATCTGGCTGCCATCTGACTGTGGTAAACATTGCTTGTCGATGTaGGTCTTAGTTTTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HIKTLAPKEIWLPSDCGKHCLSM*VLVFLQ
Trigger: TTGAAGAAAAACTAAGACTCACATCGACAAGCAATG...TTTACCACAGTCAGATGGCAGCCAGATTTCTTTGGGGGCCAAAGTTTTTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
3UTR CAA 72 bp ATAATTGAACATCGTGACGTTGCACACAGCTATGCTTaGTCTAGTCTCTTAACCCAACTATCTCAACTGTCT +
Preference number: 4 (lower is better)
Translates to: IIEHRDVAHSYA*SSLLTQLSQLS
Trigger: AGACAGTTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACGATGTTCAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR CAA 90 bp GGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGGGCCGAGGGCCCGGAGCTTTCTTGTTTTCTTaGGAGAAGTCCAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GQQRGLQADYGSQGRGPGAFLFS*EKSREV
Trigger: CACCTCCCTGGACTTCTCCAAAGAAAACAAGAAAGC...TCCGGGCCCTCGGCCCTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CAA 90 bp CATCTTGAGGAAGCAGGGCAACAGCGGGGTCTGCAGGCTGACTATGGTTCTCAGTTCTGCAGCTGGAGCTaGCCATGCTCAGTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: HLEEAGQQRGLQADYGSQFCSWS*PCSVEN
Trigger: ATTTTCCACTGAGCATGGCAAGCTCCAGCTGCAGAA...CTGAGAACCATAGTCAGCCTGCAGACCCCGCTGTTGCCCTGCTTCCTCAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR CAA 90 bp CTTAACCCAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCGCTTCTCCCCTCCCTTaGGATACAGTGGAAACTCTC +
Preference number: 5 (lower is better)
Translates to: LNPTISTVSWSAHWASCLASPLP*DTVETL
Trigger: GAGAGTTTCCACTGTATCCAAAGGGAGGGGAGAAGC...GAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTGGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CAA 90 bp TACATCTGCATGGAGCCTCAGGTGGCAATCACAGGTCACATGGGACTCTCCTGTCAGGTTAGGAAGAGTTaGCCTCAAGTCTGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: YICMEPQVAITGHMGLSCQVRKS*PQVWSP
Trigger: GGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTG...ACAGGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCTCCATGCAGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CAA 90 bp CTTAACCCAACTATCTCAACTGTCTCGTGGTCTGCACACTGGGCATCCTGCCTCGATGATTTCCTCTGCTaGCTCCACTGCACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: LNPTISTVSWSAHWASCLDDFLC*LHCTAE
Trigger: CTCTGCTGTGCAGTGGAGCAAGCAGAGGAAATCATC...GAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAGATAGTTGGGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CAA 90 bp TCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCAATTTCTGCAGCTGGAGCTaGCCATGCTCAGTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: SQGRGPGTETITLFLILNFCSWS*PCSVEN
Trigger: ATTTTCCACTGAGCATGGCAAGCTCCAGCTGCAGAA...ATTGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR CAA 90 bp ATGACCCTGAGTCCCCTCAGTTCCCAAAGTCAGCCTTTACGAGGAATCTGCTCCGAAAATGCACTTCCTTaGTCCTGTAGAGCCATCTGT +
Preference number: 5 (lower is better)
Translates to: MTLSPLSSQSQPLRGICSENALP*SCRAIC
Trigger: ACAGATGGCTCTACAGGACAAAGGAAGTGCATTTTC...GGAGCAGATTCCTCGTAAAGGCTGACTTTGGGAACTGAGGGGACTCAGGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR CAA 90 bp TACATCTGCATGGAGCCTCAGGTGGCAATCACAGGTCACATGGGACTCTCCTGTTGCTTCCATCATCTTTaGCTTGGAAGTCCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: YICMEPQVAITGHMGLSCCFHHL*LGSPRN
Trigger: ATTCCGAGGACTTCCAAGCAAAAGATGATGGAAGCA...ACAGGAGAGTCCCATGTGACCTGTGATTGCCACCTGAGGCTCCATGCAGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CAA 90 bp GTTCTCAGGGCCGAGGGCCCGGAACAGAGACCATCACACTGTTTCTTATTCTCATCAGTGAAACACTGTTaGACATATGGACTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VLRAEGPEQRPSHCFLFSSVKHC*TYGLSF
Trigger: AAAGGAGAGTCCATATGTCAAACAGTGTTTCACTGA...TGAGAATAAGAAACAGTGTGATGGTCTCTGTTCCGGGCCCTCGGCCCTGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209123.2
CDS-3UTR CAA 90 bp GAGACCATCACACTGTTTCTTATTCTCAATCTAAAGGATGGGTACAGGCCTCTCGAAAATGCACTTCCTTaGTCCTGTAGAGCCATCTGT +
Preference number: 5 (lower is better)
Translates to: ETITLFLILNLKDGYRPLENALP*SCRAIC
Trigger: ACAGATGGCTCTACAGGACAAAGGAAGTGCATTTTC...GAGAGGCCTGTACCCATCCTTTAGATTGAGAATAAGAAACAGTGTGATGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037968.10
ENSMUST00000209123.2
CDS-3UTR CAA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAATCGTTGATGTTATCTTaGATTGTTGATCTGGACCCC +
Preference number: 5 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQSLMLS*IVDLDP
Trigger: GGGGTCCAGATCAACAATCAAAGATAACATCAACGA...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS-3UTR CAA 90 bp CGTGACGTTGCACACAGCTATGCTTTGTCTAGTCTCTTAACCCAACTATCTCAATCTGTCAGCTTGTCGTaGATGTTATCTTTGATTGTT +
Preference number: 5 (lower is better)
Translates to: RDVAHSYALSSLLTQLSQSVSLS*MLSLIV
Trigger: AACAATCAAAGATAACATCAACGACAAGCTGACAGA...TTGAGATAGTTGGGTTAAGAGACTAGACAAAGCATAGCTGTGTGCAACGTCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS TCA 72 bp CTTTGTCTCTTCGGGACAGGGATGGCATTGGAGATGTaGTGTCTGTCACACCTGACCATCAGTCCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: LCLFGTGMALEM*CLSHLTISPCS
Trigger: GGAGCACGGACTGATGGTCAGGTGTGACAGACATCACATCTCCAATGCCATCCCTGTCCCGAAGAGACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10
CDS GCA 72 bp AGACCAAATGTGCAGTGTAACCAAGGGCGACGGCAATaGTTCCATCATCTTTTGCTTGGAAGTCCTCGGAAT +
Preference number: 6 (lower is better)
Translates to: RPNVQCNQGRRQ*FHHLLLGSPRN
Trigger: ATTCCGAGGACTTCCAAGCAAAAGATGATGGAAGCATTGCCGTCGCCCTTGGTTACACTGCACATTTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037968.10