Pregenerated sensors for UTP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035575Ensembl transcript IDs: ENSMUST00000043152.6, ENSMUST00000108241.8
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCACTTCCCACTCCCTCCCCCGCCACAAAGCTGGGCATCCTCCATaGCATTCTTGGCCTGTCCATCCTTGGGGTAAATCGTTTCCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: GTSHSLPRHKAGHPP*HSWPVHPWGKSFPV Trigger: CACAGGAAACGATTTACCCCAAGGATGGACAGGCCAAGAATGGCATGGAGGATGCCCAGCTTTGTGGCGGGGGAGGGAGTGGGAAGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CCA 90 bp | GGGCAGGAGAGTAAAGGTGGGACATCCAAGAAGAGATCGGAACTCTaGGAAGAATTGAGAGGTGGGAGATCTGCCGGCCAGACTTGGAAC | + |
|
Preference number: 1 (lower is better) Translates to: GQESKGGTSKKRSEL*EELRGGRSAGQTWN Trigger: GTTCCAAGTCTGGCCGGCAGATCTCCCACCTCTCAATTCTTCCCAGAGTTCCGATCTCTTCTTGGATGTCCCACCTTTACTCTCCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR GCA 90 bp | CAAGAAGAGATCGGAACTCTGGGAAGAATTGAGAGGTGGGAGATCTaGCGGCCAGACTTGGAACTTGAATGTACGGGGCTGAGGAGAGGT | + |
|
Preference number: 1 (lower is better) Translates to: QEEIGTLGRIERWEI*RPDLELECTGLRRG Trigger: ACCTCTCCTCAGCCCCGTACATTCAAGTTCCAAGTCTGGCCGGCAGATCTCCCACCTCTCAATTCTTCCCAGAGTTCCGATCTCTTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CCA 90 bp | TGGGACATCCAAGAAGAGATCGGAACTCTGGGAAGAATTGAGAGGTaGGAGATCTGCCGGCCAGACTTGGAACTTGAATGTACGGGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: WDIQEEIGTLGRIER*EICRPDLELECTGL Trigger: CAGCCCCGTACATTCAAGTTCCAAGTCTGGCCGGCAGATCTCCCACCTCTCAATTCTTCCCAGAGTTCCGATCTCTTCTTGGATGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR TCA 90 bp | CAAAATGTTAAGGTCCAGCTGTTGAGGCCTGTAACCTCAGCCACTTaGGAGGCTGAGGCAAGAGCATTCAAAGTTCAAGGCCTGCCTAGA | + |
|
Preference number: 1 (lower is better) Translates to: QNVKVQLLRPVTSAT*EAEARAFKVQGLPR Trigger: TCTAGGCAGGCCTTGAACTTTGAATGCTCTTGCCTCAGCCTCTCAAGTGGCTGAGGTTACAGGCCTCAACAGCTGGACCTTAACATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR GCA 90 bp | GTGTGTTCTGTTGTGCTGATCCACAATGGTCTGGCTGCCTGTCACTaGAAGCCCTATCAGAATCTTCTGCAAGGGTGGAAATACAAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: VCSVVLIHNGLAACH*KPYQNLLQGWKYKL Trigger: GAGCTTGTATTTCCACCCTTGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCATTGTGGATCAGCACAACAGAACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR GCA 90 bp | CATGCCATTCTTGGCCTGTCCATCCTTGGGGTAAATCGTTTCCTGTaGCACCTCAACCTTCTTAAAAGACAAACTTCTCCCAATACCCAG | + |
|
Preference number: 1 (lower is better) Translates to: HAILGLSILGVNRFL*HLNLLKRQTSPNTQ Trigger: CTGGGTATTGGGAGAAGTTTGTCTTTTAAGAAGGTTGAGGTGGCACAGGAAACGATTTACCCCAAGGATGGACAGGCCAAGAATGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR GCA 90 bp | AGGATATCGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAATTGAACTTGGGACATCTGGAAGAGCAGTCAGTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: RISDPITDGCEPPCG*WELNLGHLEEQSVL Trigger: TAAGACTGACTGCTCTTCCAGATGTCCCAAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCGATATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR GCA 90 bp | ACAATGGTCTGGCTGCCTGTCACTGCAAGCCCTATCAGAATCTTCTaGAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACAT | + |
|
Preference number: 1 (lower is better) Translates to: TMVWLPVTASPIRIF*KGGNTSSIICTVQH Trigger: ATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR TCA 90 bp | GGAATTGAACTTGGGACATCTGGAAGAGCAGTCAGTCTTAACCGCTaGGCCATCTCCCCTGGCTCTCTCAATGTATTTTTAAGACAAAAA | + |
|
Preference number: 1 (lower is better) Translates to: GIELGTSGRAVSLNR*AISPGSLNVFLRQK Trigger: TTTTTGTCTTAAAAATACATTGAGAGAGCCAGGGGAGATGGCTCAGCGGTTAAGACTGACTGCTCTTCCAGATGTCCCAAGTTCAATTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR TCA 90 bp | TGTACACATTCTCCTCTATCACTTCTGATTTGTTTGATAAACAGCTaGTGGCTGGGCAGGAGAGTAAAGGTGGGACATCCAAGAAGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: CTHSPLSLLICLINS*WLGRRVKVGHPRRD Trigger: ATCTCTTCTTGGATGTCCCACCTTTACTCTCCTGCCCAGCCATCAGCTGTTTATCAAACAAATCAGAAGTGATAGAGGAGAATGTGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR TCA 90 bp | CACCCCCTACTGAGGCACTTCCCACTCCCTCCCCCGCCACAAAGCTGGGCATCCAACTCTGGGAAGAATTaGGAGGTGGGAGATCTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: HPLLRHFPLPPPPQSWASNSGKN*EVGDLP Trigger: CGGCAGATCTCCCACCTCTCAATTCTTCCCAGAGTT...GGATGCCCAGCTTTGTGGCGGGGGAGGGAGTGGGAAGTGCCTCAGTAGGGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR GCA 90 bp | CACCCCCTACTGAGGCACTTCCCACTCCCTCCCCCGCCACAAAGCTGGGCATCCACCTGCCCCGAGACTTaGATCACAACTTCAGCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: HPLLRHFPLPPPPQSWASTCPET*ITTSAN Trigger: GTTGGCTGAAGTTGTGATGCAAGTCTCGGGGCAGGT...GGATGCCCAGCTTTGTGGCGGGGGAGGGAGTGGGAAGTGCCTCAGTAGGGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CAA 90 bp | GGAACTCTGGGAAGAATTGAGAGGTGGGAGATCTGCCGGCCAGACTaGGAACTTGAATGTACGGGGCTGAGGAGAGGTGATCAGCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: GTLGRIERWEICRPD*ELECTGLRRGDQPG Trigger: ACCTGGCTGATCACCTCTCCTCAGCCCCGTACATTCAAGTTCCAAGTCTGGCCGGCAGATCTCCCACCTCTCAATTCTTCCCAGAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCTATTTCTTGAATGATCGGGAGCTGGAGGGTTaGGGCAGTCCATCCACACCC | + |
|
Preference number: 2 (lower is better) Translates to: FQVSLFPAGEGRRYFLNDRELEG*GSPSTP Trigger: GGGTGTGGATGGACTGCCTCAACCCTCCAGCTCCCG...ATCATTCAAGAAATAGCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTGTCACTCATCTTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCTTGAATGTACGGGGCTaGGGAGAGGTGATCAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLSLIFQVSLFPAGEGRRLNVRG*GEVISQ Trigger: CTGGCTGATCACCTCTCCTCAGCCCCGTACATTCAA...GCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAAGATGAGTGACAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR CCA 90 bp | GGCCTGTCCATCCTTGGGGTAAATCGTTTCCTGTGCCACCTCAACCTTCTTAAATCTGCCGGCCAGACTTaGAACTTGAATGTACGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GLSILGVNRFLCHLNLLKSAGQT*NLNVRG Trigger: GCCCCGTACATTCAAGTTCCAAGTCTGGCCGGCAGA...TTTAAGAAGGTTGAGGTGGCACAGGAAACGATTTACCCCAAGGATGGACAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CAA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTTGGGACATCTGGAAGAGCAGTCAGTCTTAACCGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWE*NLGHLEEQSVLTAE Trigger: CTCAGCGGTTAAGACTGACTGCTCTTCCAGATGTCCCAAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CAA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTaGGGACATCTGGAAGAGCAGTCAGTCTTAACCGCTGAGCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: ITDGCEPPCGCWELN*GHLEEQSVLTAEPS Trigger: AGATGGCTCAGCGGTTAAGACTGACTGCTCTTCCAGATGTCCCAAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTGTCACTCATCTTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCAGCAGTACTCATTTCTaGAACCAAAGATTAACACCA | + |
|
Preference number: 2 (lower is better) Translates to: SLSLIFQVSLFPAGEGRRSSTHF*NQRLTP Trigger: TGGTGTTAATCTTTGGTTCCAGAAATGAGTACTGCT...GCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAAGATGAGTGACAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR GCA 90 bp | ATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACCATGTGGCCATTTAAGATCTGCCCCGAGACTTaGATCACAACTTCAGCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: IQALLSALCNMVTMWPFKICPET*ITTSAN Trigger: GTTGGCTGAAGTTGTGATGCAAGTCTCGGGGCAGAT...CTTAAATGGCCACATGGTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR CAA 90 bp | CAGACAAGGGCGTTGCCTCCTGCATGTGATGCTGGAAAGAGCAAATaGGCAAATTTTGTTCTTTTACCTAATTCAGTAATTCCACTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QTRALPPACDAGKSK*ANFVLLPNSVIPLS Trigger: TGACAGTGGAATTACTGAATTAGGTAAAAGAACAAAATTTGCCAATTTGCTCTTTCCAGCATCACATGCAGGAGGCAACGCCCTTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCTATTTCTTGAATGATTTCAGTGTTGATTTTTaGACCAGTAGAGTACTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: FQVSLFPAGEGRRYFLNDFSVDF*TSRVLS Trigger: GGACAGTACTCTACTGGTTCAAAAATCAACACTGAA...ATCATTCAAGAAATAGCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTCAGACACACCAGAAGAGGATATCGGATCCCATTACAGATGGTTGTGAGCAGCTCTTGCCTCAAATaGAAATTTAGGTTTATCACA | + |
|
Preference number: 2 (lower is better) Translates to: VFRHTRRGYRIPLQMVVSSSCLK*KFRFIT Trigger: TGTGATAAACCTAAATTTGCATTTGAGGCAAGAGCT...GCTCACAACCATCTGTAATGGGATCCGATATCCTCTTCTGGTGTGTCTGAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR CCA 90 bp | GGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATTTTGTACTGTCCGGACTTTaGTACTGTTATTTTTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: GIILGTVKAVFVVFSVDFVLSGL*YCYFYE Trigger: TTCATAAAAATAACAGTACCAAAGTCCGGACAGTAC...AAAATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CCA 72 bp | CTGAGGCACTTCCCACTCCCTCCCCCGCCACAAAGCTaGGCATCCTCCATGCCATTCTTGGCCTGTCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: LRHFPLPPPPQS*ASSMPFLACPS Trigger: GGATGGACAGGCCAAGAATGGCATGGAGGATGCCCAGCTTTGTGGCGGGGGAGGGAGTGGGAAGTGCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCCTACTGAGGCACTTCCCACTCCCTCCCCCGCCACAAAGCTGGGCATCCGAACTCTGGGAAGAATaGAGAGGTGGGAGATCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HPLLRHFPLPPPPQSWASELWEE*RGGRSA Trigger: GGCAGATCTCCCACCTCTCAATTCTTCCCAGAGTTC...GGATGCCCAGCTTTGTGGCGGGGGAGGGAGTGGGAAGTGCCTCAGTAGGGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR GCA 72 bp | TCACACACCAGCTCATCACAAACCTGCCCCGAGACTTaGATCACAACTTCAGCCAACTGGTGGTGCTCGACC | + |
|
Preference number: 3 (lower is better) Translates to: SHTSSSQTCPET*ITTSANWWCST Trigger: GGTCGAGCACCACCAGTTGGCTGAAGTTGTGATGCAAGTCTCGGGGCAGGTTTGTGATGAGCTGGTGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR GCA 72 bp | CCAGCCAGGATTACAGTGAGAATCTGCCCCGAGACTTaGATCACAACTTCAGCCAACTGGTGGTGCTCGACC | + |
|
Preference number: 3 (lower is better) Translates to: PARITVRICPET*ITTSANWWCST Trigger: GGTCGAGCACCACCAGTTGGCTGAAGTTGTGATGCAAGTCTCGGGGCAGATTCTCACTGTAATCCTGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCCTACTGAGGCACTTCCCACTCCCTCCCCCGCCACAAAGCTGGGCATCCAGCCTGGAACAAGAATaGAAGCTGAATCATATGATT | + |
|
Preference number: 3 (lower is better) Translates to: HPLLRHFPLPPPPQSWASSLEQE*KLNHMI Trigger: AATCATATGATTCAGCTTCAATTCTTGTTCCAGGCT...GGATGCCCAGCTTTGTGGCGGGGGAGGGAGTGGGAAGTGCCTCAGTAGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR GCA 72 bp | ATCGGAACTCTGGGAAGAATTGAGAGGTGGGAGATCTaGCGGCCAGACTTGGAACTTGAATGTACGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: IGTLGRIERWEI*RPDLELECTGL Trigger: CAGCCCCGTACATTCAAGTTCCAAGTCTGGCCGGCAGATCTCCCACCTCTCAATTCTTCCCAGAGTTCCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTATCATGCAGGCTTTCTACTTTCTCTTGGGTTaGAACTGGGTCCCTCACACC | + |
|
Preference number: 3 (lower is better) Translates to: QSIHTLVPPISTGIMQAFYFLLG*NWVPHT Trigger: GGTGTGAGGGACCCAGTTCAAACCCAAGAGAAAGTA...GAAAGCCTGCATGATACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR TCA 72 bp | AAGGTCCAGCTGTTGAGGCCTGTAACCTCAGCCACTTaGGAGGCTGAGGCAAGAGCATTCAAAGTTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KVQLLRPVTSAT*EAEARAFKVQG Trigger: GCCTTGAACTTTGAATGCTCTTGCCTCAGCCTCTCAAGTGGCTGAGGTTACAGGCCTCAACAGCTGGACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CCA 72 bp | AGTAAAGGTGGGACATCCAAGAAGAGATCGGAACTCTaGGAAGAATTGAGAGGTGGGAGATCTGCCGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SKGGTSKKRSEL*EELRGGRSAGQ Trigger: CTGGCCGGCAGATCTCCCACCTCTCAATTCTTCCCAGAGTTCCGATCTCTTCTTGGATGTCCCACCTTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCTATTTCTTGAATGATTCGGGAGCTGGAGGGTaGAGGCAGTCCATCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: FQVSLFPAGEGRRYFLNDSGAGG*RQSIHT Trigger: GGTGTGGATGGACTGCCTCAACCCTCCAGCTCCCGA...ATCATTCAAGAAATAGCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTCAGACACACCAGAAGAGGATATCGGATCCCATTACAGATGGTTGTGAGCTCCTCCATGCCATTCTaGGCCTGTCCATCCTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VFRHTRRGYRIPLQMVVSSSMPF*ACPSLG Trigger: CCCCAAGGATGGACAGGCCAAGAATGGCATGGAGGA...GCTCACAACCATCTGTAATGGGATCCGATATCCTCTTCTGGTGTGTCTGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTCAGACACACCAGAAGAGGATATCGGATCCCATTACAGATGGTTGTGAGCCCCAAATGCCCTCCTTaGTGCCAATCTGCCCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VFRHTRRGYRIPLQMVVSPKCPP*CQSAPP Trigger: TGGAGGGGCAGATTGGCACAAAGGAGGGCATTTGGG...GCTCACAACCATCTGTAATGGGATCCGATATCCTCTTCTGGTGTGTCTGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR TCA 72 bp | AGGGAATGTGGCCAATCAATGTGTGTTCTGTTGTGCTaGTCCACAATGGTCTGGCTGCCTGTCACTGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RECGQSMCVLLC*STMVWLPVTAS Trigger: GCTTGCAGTGACAGGCAGCCAGACCATTGTGGATCAGCACAACAGAACACACATTGATTGGCCACATTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR GCA 72 bp | AAGGAAGTACGTAATCCCCAGTGCAGACAAGGGCGTTaGCTCCTGCATGTGATGCTGGAAAGAGCAAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: KEVRNPQCRQGR*LLHVMLERANW Trigger: CCAATTTGCTCTTTCCAGCATCACATGCAGGAGGCAACGCCCTTGTCTGCACTGGGGATTACGTACTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR GCA 72 bp | GTTGTGCTGATCCACAATGGTCTGGCTGCCTGTCACTaGAAGCCCTATCAGAATCTTCTGCAAGGGTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VVLIHNGLAACH*KPYQNLLQGWK Trigger: TTTCCACCCTTGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCATTGTGGATCAGCACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR TCA 72 bp | CCAGAAGAGGATATCGGATCCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PEEDIGSHYRWL*ATMWLLGIELG Trigger: CCCAAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCGATATCCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CCA 72 bp | CAAGAAGAGATCGGAACTCTGGGAAGAATTGAGAGGTaGGAGATCTGCCGGCCAGACTTGGAACTTGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: QEEIGTLGRIER*EICRPDLELEC Trigger: ACATTCAAGTTCCAAGTCTGGCCGGCAGATCTCCCACCTCTCAATTCTTCCCAGAGTTCCGATCTCTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR TCA 72 bp | ATCCCCAGTGCAGACAAGGGCGTTGCCTCCTGCATGTaGTGCTGGAAAGAGCAAATTGGCAAATTTTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IPSADKGVASCM*CWKEQIGKFCS Trigger: AGAACAAAATTTGCCAATTTGCTCTTTCCAGCATCACATGCAGGAGGCAACGCCCTTGTCTGCACTGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR TCA 72 bp | CTTGGGACATCTGGAAGAGCAGTCAGTCTTAACCGCTaGGCCATCTCCCCTGGCTCTCTCAATGTATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGTSGRAVSLNR*AISPGSLNVFL Trigger: TAAAAATACATTGAGAGAGCCAGGGGAGATGGCTCAGCGGTTAAGACTGACTGCTCTTCCAGATGTCCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR GCA 72 bp | TCCACACCCTCGTCCCTCCTATCTCCACAGGTATCATaGAGGCTTTCACAACAAGAAGAGAACACACAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: STPSSLLSPQVS*RLSQQEENTQN Trigger: GTTTTGTGTGTTCTCTTCTTGTTGTGAAAGCCTGCATGATACCTGTGGAGATAGGAGGGACGAGGGTGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCACTGTGCAACATGGTAACCATGTGGCCATTTAAGCACTTACAATGTGACAATCTGCCCCGAGACTaGCATCACAACTTCAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SALCNMVTMWPFKHLQCDNLPRD*HHNFSQ Trigger: TTGGCTGAAGTTGTGATGCAAGTCTCGGGGCAGATT...GTCACATTGTAAGTGCTTAAATGGCCACATGGTTACCATGTTGCACAGTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR CCA 72 bp | GCTCTATTATCTGCACTGTGCAACATGGTAACCATGTaGCCATTTAAGCACTTACAATGTGACAAGTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ALLSALCNMVTM*PFKHLQCDKCG Trigger: GCCACACTTGTCACATTGTAAGTGCTTAAATGGCCACATGGTTACCATGTTGCACAGTGCAGATAATAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR CCA 72 bp | TGTCACTGCAAGCCCTATCAGAATCTTCTGCAAGGGTaGAAATACAAGCTCTATTATCTGCACTGTGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: CHCKPYQNLLQG*KYKLYYLHCAT Trigger: TGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAAGATTCTGATAGGGCTTGCAGTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR GCA 72 bp | GCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTaGAACATGGTAACCATGTGGCCATTTAAGCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: ARVEIQALLSAL*NMVTMWPFKHL Trigger: TAAGTGCTTAAATGGCCACATGGTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR TCA 72 bp | GTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATTTTTaGACCAGTAGAGTACTGTCCGGACTTTGGTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: VKAVFVVFSVDF*TSRVLSGLWYC Trigger: ACAGTACCAAAGTCCGGACAGTACTCTACTGGTTCAAAAATCAACACTGAATACTACAAAGACAGCCTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR TCA 72 bp | TCCCCTAAGGAAGTGCCAGTGAATGTAACCAAAGATTaGCAAGAATCTTCACCAATATCGTTTATACTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SPKEVPVNVTKD*QESSPISFILL Trigger: TAAAAGTATAAACGATATTGGTGAAGATTCTTGTCAATCTTTGGTTACATTCACTGGCACTTCCTTAGGGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | TCAGTATTCGGGAGCTGGAGGGTTGAGGCAGTCCATCCACACCCTCGTCCCTCCGCTGGCTTGTTTGAGTaGATGGCAAGCATGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVFGSWRVEAVHPHPRPSAGLFE*MASMAE Trigger: CTCTGCCATGCTTGCCATTCACTCAAACAAGCCAGC...GGAGGGACGAGGGTGTGGATGGACTGCCTCAACCCTCCAGCTCCCGAATACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGGGTTGAGGCAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTCTCTGCCACCTGCAGTaGTTCTTTGAAGAGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGGLRQSIHTLVPPISTGLCHLQ*FFEEVL Trigger: CAGGACCTCTTCAAAGAAGCACTGCAGGTGGCAGAG...ACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTGCCTCAACCCTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | CACCCCCTACTGAGGCACTTCCCACTCCCTCCCCCGCCACAAAGCTGGGCATCCTCAGGTTTACCATCTTaGAGGGTTCCTGCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HPLLRHFPLPPPPQSWASSGLPS*RVPAPF Trigger: AAAAGGAGCAGGAACCCTGCAAGATGGTAAACCTGA...GGATGCCCAGCTTTGTGGCGGGGGAGGGAGTGGGAAGTGCCTCAGTAGGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | CAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTATCATGCAGGCTTTCGCCTTAATCTCCGCGTaGCTGAAGAGTCCGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSIHTLVPPISTGIMQAFALISA*LKSPMR Trigger: GCGCATCGGACTCTTCAGTCACGCGGAGATTAAGGC...GAAAGCCTGCATGATACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | GCTGGAGGGTTGAGGCAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTCAAAGCTGGCTTGTTTaGGTGAATGGCAAGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGGLRQSIHTLVPPISTGQSWLV*VNGKHG Trigger: GCCATGCTTGCCATTCACTCAAACAAGCCAGCTTTG...ACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTGCCTCAACCCTCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGGGTTGAGGCAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTAAGGGCAGACAAACCTaGGGTTTGAGGTGTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGGLRQSIHTLVPPISTGKGRQT*GLRCAK Trigger: CTTTGCACACCTCAAACCCCAGGTTTGTCTGCCCTT...ACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTGCCTCAACCCTCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CCA 90 bp | TCAGTATTCGGGAGCTGGAGGGTTGAGGCAGTCCATCCACACCCTCGTCCCTCCCCATTTCCACTGCTTTaGCTTGTTTCGACACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVFGSWRVEAVHPHPRPSPFPLL*LVSTQA Trigger: AGCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGG...GGAGGGACGAGGGTGTGGATGGACTGCCTCAACCCTCCAGCTCCCGAATACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | CAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTATCATGCAGGCTTTCGACAAACCTGGGGTTTaGGGTGTGCAAAGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSIHTLVPPISTGIMQAFDKPGV*GVQRLP Trigger: AGGAAGCCTTTGCACACCTCAAACCCCAGGTTTGTC...GAAAGCCTGCATGATACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | TGGTCTGGCTGCCTGTCACTGCAAGCCCTATCAGAATCTTCTGCAAGGGTGGAAGTTCTTTCCAGCCTCTaGCCTCTGAGGGGCACACTA | + |
|
Preference number: 4 (lower is better) Translates to: WSGCLSLQALSESSARVEVLSSL*PLRGTL Trigger: TAGTGTGCCCCTCAGAGGGCAGAGGCTGGAAAGAAC...TTCCACCCTTGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGGGTTGAGGCAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTATCTTGCAGGGTTCCTaGTCCTTTTCAAACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AGGLRQSIHTLVPPISTGILQGS*SFSNCI Trigger: GATGCAGTTTGAAAAGGAGCAGGAACCCTGCAAGAT...ACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTGCCTCAACCCTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | TGGTCTGGCTGCCTGTCACTGCAAGCCCTATCAGAATCTTCTGCAAGGGTGGAACTCTGCCACCTGCAGTaGTTCTTTGAAGAGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSGCLSLQALSESSARVELCHLQ*FFEEVL Trigger: CAGGACCTCTTCAAAGAAGCACTGCAGGTGGCAGAG...TTCCACCCTTGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR GCA 90 bp | ATCCTCCATGCCATTCTTGGCCTGTCCATCCTTGGGGTAAATCGTTTCCTGTGCCCAGCCTCTGCCACCTaGAGTGCTTCTTTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILHAILGLSILGVNRFLCPASAT*SASLKR Trigger: CCTCTTCAAAGAAGCACTGCAGGTGGCAGAGGCTGG...GCACAGGAAACGATTTACCCCAAGGATGGACAGGCCAAGAATGGCATGGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | TCTCTGTCACTCATCTTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCCTGCCTGGCACTTTCTaGAGACAAGCGGTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLIFQVSLFPAGEGRRLPGTF*RQAVFH Trigger: ATGGAAGACCGCTTGTCTTCAGAAAGTGCCAGGCAG...GCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAAGATGAGTGACAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | ATCCTCCATGCCATTCTTGGCCTGTCCATCCTTGGGGTAAATCGTTTCCTGTGCCCACATAATCCCAAGTaGGTGGGTCATCGGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILHAILGLSILGVNRFLCPHNPK*VGHRCA Trigger: TGCACACCGATGACCCACTCACTTGGGATTATGTGG...GCACAGGAAACGATTTACCCCAAGGATGGACAGGCCAAGAATGGCATGGAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | TCTCTGTCACTCATCTTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCGGCTCTTTGAGTCAATaGGCACCTGGAGCTTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLIFQVSLFPAGEGRRGSLSQ*APGASS Trigger: AGACGAAGCTCCAGGTGCTCATTGACTCAAAGAGCC...GCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAAGATGAGTGACAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | TCTCTGTCACTCATCTTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCTACATCCGGGCTCTTTaGGTCAATGAGCACCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLIFQVSLFPAGEGRRYIRAL*VNEHLE Trigger: CTCCAGGTGCTCATTGACTCAAAGAGCCCGGATGTA...GCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAAGATGAGTGACAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | GATCCACAATGGTCTGGCTGCCTGTCACTGCAAGCCCTATCAGAATCTTCTGCAGACAAACCTGGGGTTTaGGGTGTGCAAAGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPQWSGCLSLQALSESSADKPGV*GVQRLP Trigger: AGGAAGCCTTTGCACACCTCAAACCCCAGGTTTGTC...TGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCATTGTGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR GCA 90 bp | GATCCACAATGGTCTGGCTGCCTGTCACTGCAAGCCCTATCAGAATCTTCTGCACTGGGGTTTGAGGTGTaGAAAGGCTTCCTCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DPQWSGCLSLQALSESSALGFEV*KGFLKA Trigger: CGCTTTGAGGAAGCCTTTGCACACCTCAAACCCCAG...TGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCATTGTGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTATTCGGGAGCTGGAGGGTTGAGGCAGTCCATCCACACCCTCGTCCCTCCGCAAGAAGTGACACATaGAATTCTGCACCTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: SVFGSWRVEAVHPHPRPSARSDT*NSAPLI Trigger: GATTAAAGGTGCAGAATTCCATGTGTCACTTCTTGC...GGAGGGACGAGGGTGTGGATGGACTGCCTCAACCCTCCAGCTCCCGAATACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | ATCCACAATGGTCTGGCTGCCTGTCACTGCAAGCCCTATCAGAATCTTCTGCAACTCCTTCAGAGTTACTaGACTGGCACCTGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHNGLAACHCKPYQNLLQLLQSY*TGTCDS Trigger: GCTGTCACAGGTGCCAGTTCAGTAACTCTGAAGGAG...TTGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCATTGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTCAGACACACCAGAAGAGGATATCGGATCCCATTACAGATGGTTGTGAGCTTCGGTCCCAGCCTCTaGCACCTGCAGTGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFRHTRRGYRIPLQMVVSFGPSL*HLQCFF Trigger: AAAGAAGCACTGCAGGTGGCAGAGGCTGGGACCGAA...GCTCACAACCATCTGTAATGGGATCCGATATCCTCTTCTGGTGTGTCTGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | GGCCTGTCCATCCTTGGGGTAAATCGTTTCCTGTGCCACCTCAACCTTCTTAAACTGGGGTTTGAGGTGTaGAAAGGCTTCCTCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLSILGVNRFLCHLNLLKLGFEV*KGFLKA Trigger: CGCTTTGAGGAAGCCTTTGCACACCTCAAACCCCAG...TTTAAGAAGGTTGAGGTGGCACAGGAAACGATTTACCCCAAGGATGGACAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CAA 72 bp | ATAAAGTCTCTTAATCAGTATTCGGGAGCTGGAGGGTaGAGGCAGTCCATCCACACCCTCGTCCCTCCTATC | + |
|
Preference number: 4 (lower is better) Translates to: IKSLNQYSGAGG*RQSIHTLVPPI Trigger: GATAGGAGGGACGAGGGTGTGGATGGACTGCCTCAACCCTCCAGCTCCCGAATACTGATTAAGAGACTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CAA 72 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTaGGGACATCTGGAAGAGCAGTCAGTCTTAACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWELN*GHLEEQSVLTA Trigger: AGCGGTTAAGACTGACTGCTCTTCCAGATGTCCCAAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCATTTAAGCACTTACAATGTGACAAGTGTGGCCCCTCTTAGAGGCACACTGCCTGGCACTTTCTaGAGACAAGCGGTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGHLSTYNVTSVAPLRGTLPGTF*RQAVFH Trigger: ATGGAAGACCGCTTGTCTTCAGAAAGTGCCAGGCAG...TGTGCCTCTAAGAGGGGCCACACTTGTCACATTGTAAGTGCTTAAATGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGGCTGCCTGTCACTGCAAGCCCTATCAGAATCTTCTGCAAGGGTGGAAAGGATTTCTTCAGGATaGTCAAAATCCCCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSGCLSLQALSESSARVERISSG*SKSPMS Trigger: GGACATGGGGGATTTTGATCATCCTGAAGAAATCCT...TTCCACCCTTGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCATTTAAGCACTTACAATGTGACAAGTGTGGCCCCTCTTAGAGGCACACCACATAATCCCAAGTaGGTGGGTCATCGGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGHLSTYNVTSVAPLRGTPHNPK*VGHRCA Trigger: TGCACACCGATGACCCACTCACTTGGGATTATGTGG...TGTGCCTCTAAGAGGGGCCACACTTGTCACATTGTAAGTGCTTAAATGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR TCA 90 bp | ATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACCATGTGGCCATTTAAGCCAGCCTCTGCCCTCTaGGGGGCACACTACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQALLSALCNMVTMWPFKPASAL*GAHYWS Trigger: AGACCAGTAGTGTGCCCCTCAGAGGGCAGAGGCTGG...CTTAAATGGCCACATGGTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCATTTAAGCACTTACAATGTGACAAGTGTGGCCCCTCTTAGAGGCACATACATCCGGGCTCTTTaGGTCAATGAGCACCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CGHLSTYNVTSVAPLRGTYIRAL*VNEHLE Trigger: CTCCAGGTGCTCATTGACTCAAAGAGCCCGGATGTA...TGTGCCTCTAAGAGGGGCCACACTTGTCACATTGTAAGTGCTTAAATGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTATCATGCAGGCTTTCAATCCCCCATGTCCATaGCGGCTTTTTCAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSIHTLVPPISTGIMQAFNPPCP*RLFQIL Trigger: AAGAATTTGAAAAAGCCGCCATGGACATGGGGGATT...GAAAGCCTGCATGATACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | TTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACGCCTTAATCTCCGCGTaGCTGAAGAGTCCGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FCKGGNTSSIICTVQHGNALISA*LKSPMR Trigger: GCGCATCGGACTCTTCAGTCACGCGGAGATTAAGGC...GTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTCCATGCCATTCTTGGCCTGTCCATCCTTGGGGTAAATCGTTTCCTGTGCAGGATTTCTTCAGGATaGTCAAAATCCCCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILHAILGLSILGVNRFLCRISSG*SKSPMS Trigger: GGACATGGGGGATTTTGATCATCCTGAAGAAATCCT...GCACAGGAAACGATTTACCCCAAGGATGGACAGGCCAAGAATGGCATGGAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | GGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATTTTCCAGCCTCTGCCCTCTaGGGGGCACACTACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GIILGTVKAVFVVFSVDFPASAL*GAHYWS Trigger: AGACCAGTAGTGTGCCCCTCAGAGGGCAGAGGCTGG...AAAATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | GATCCACAATGGTCTGGCTGCCTGTCACTGCAAGCCCTATCAGAATCTTCTGCAATCTTGCAGGGTTCCTaGTCCTTTTCAAACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: DPQWSGCLSLQALSESSAILQGS*SFSNCI Trigger: GATGCAGTTTGAAAAGGAGCAGGAACCCTGCAAGAT...TGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCATTGTGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGTCACTCATCTTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCTTCTTGATAGAGCTTTaGACACTCGGGATGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLIFQVSLFPAGEGRRFLIEL*TLGMKA Trigger: CGCTTTCATCCCGAGTGTCCAAAGCTCTATCAAGAA...GCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAAGATGAGTGACAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCATTTAAGCACTTACAATGTGACAAGTGTGGCCCCTCTTAGAGGCACAAAGGGCAGACAAACCTaGGGTTTGAGGTGTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGHLSTYNVTSVAPLRGTKGRQT*GLRCAK Trigger: CTTTGCACACCTCAAACCCCAGGTTTGTCTGCCCTT...TGTGCCTCTAAGAGGGGCCACACTTGTCACATTGTAAGTGCTTAAATGGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACCATGGGCTCTTTGAGTCAATaGGCACCTGGAGCTTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARVEIQALLSALCNMVTMGSLSQ*APGASS Trigger: AGACGAAGCTCCAGGTGCTCATTGACTCAAAGAGCC...CATGGTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACCCAGCCTCTGCCACCTaGAGTGCTTCTTTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FCKGGNTSSIICTVQHGNPASAT*SASLKR Trigger: CCTCTTCAAAGAAGCACTGCAGGTGGCAGAGGCTGG...GTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACTTCGGTCCCAGCCTCTaGCACCTGCAGTGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FCKGGNTSSIICTVQHGNFGPSL*HLQCFF Trigger: AAAGAAGCACTGCAGGTGGCAGAGGCTGGGACCGAA...GTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTATCATGCAGGCTTTCCCTTCTGTAGATCTTTaGCAAAATCAAATAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSIHTLVPPISTGIMQAFPSVDL*QNQIAE Trigger: CTCAGCTATTTGATTTTGCCAAAGATCTACAGAAGG...GAAAGCCTGCATGATACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CCA 90 bp | TCTCTGTCACTCATCTTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCTGTTCTTCACCTGGTTaGGACTCGATCTCTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLIFQVSLFPAGEGRRCSSPG*DSISNS Trigger: AGAATTAGAGATCGAGTCCCAACCAGGTGAAGAACA...GCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAAGATGAGTGACAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAGCTGGCTTGTTTGAGTaGATGGCAAGCATGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSARVEIQALLSALCNMVAGLFE*MASMAE Trigger: CTCTGCCATGCTTGCCATTCACTCAAACAAGCCAGC...TACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCCATCCACACCCTCGTCCCTCCTATCTCCACAGGTATCATGCAGGCTTTCGCTTTTTCAAATTCTTaGTTCTCCTTTCTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSIHTLVPPISTGIMQAFAFSNS*FSFLSF Trigger: GAAACTGAGAAAGGAGAAGCAAGAATTTGAAAAAGC...GAAAGCCTGCATGATACCTGTGGAGATAGGAGGGACGAGGGTGTGGATGGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | GTTGGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATGTTCTTTCCAGCCTCTaGCCTCTGAGGGGCACACTA | + |
|
Preference number: 4 (lower is better) Translates to: VGIILGTVKAVFVVFSVDVLSSL*PLRGTL Trigger: TAGTGTGCCCCTCAGAGGGCAGAGGCTGGAAAGAAC...ATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CCA 90 bp | ATCCACAATGGTCTGGCTGCCTGTCACTGCAAGCCCTATCAGAATCTTCTGCAAAATCCCCCATGTCCATaGCGGCTTTTTCAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHNGLAACHCKPYQNLLQNPPCP*RLFQIL Trigger: AAGAATTTGAAAAAGCCGCCATGGACATGGGGGATT...TTGCAGAAGATTCTGATAGGGCTTGCAGTGACAGGCAGCCAGACCATTGTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACCATGAGCAGCTTCAGTTCATaGGCCTTCCTGAATGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARVEIQALLSALCNMVTMSSFSS*AFLNAS Trigger: GCTTGCATTCAGGAAGGCCCATGAACTGAAGCTGCT...CATGGTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATCTCCTTCAGAGTTACTaGACTGGCACCTGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGIILGTVKAVFVVFSVDLLQSY*TGTCDS Trigger: GCTGTCACAGGTGCCAGTTCAGTAACTCTGAAGGAG...ATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | GCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACCATGACTTTCACTCCACTCTaGCCAAGAAATCCACAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARVEIQALLSALCNMVTMTFTPL*PRNPQG Trigger: CCCTTGTGGATTTCTTGGGCAGAGTGGAGTGAAAGT...CATGGTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR CAA 72 bp | CTTTCTGCTCTGCTCTGCCCTAGTGTTGGGATAATCTaGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSALLCPSVGII*GTVKAVFVVFS Trigger: ACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCCAACACTAGGGCAGAGCAGAGCAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCATTTAAGCACTTACAATGTGACAAGTGTGGCCCCTCTTAGAGGCACAGCAAAATCAAATAGCTaGGCAATAGCAAGAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CGHLSTYNVTSVAPLRGTAKSNS*AIARSD Trigger: GTCACTTCTTGCTATTGCTCAGCTATTTGATTTTGC...TGTGCCTCTAAGAGGGGCCACACTTGTCACATTGTAAGTGCTTAAATGGCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCACTGTGCAACATGGTAACCATGTGGCCATTTAAGCACTTACAATGTGACTCAGGTTTACCATCTTaGAGGGTTCCTGCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SALCNMVTMWPFKHLQCDSGLPS*RVPAPF Trigger: AAAAGGAGCAGGAACCCTGCAAGATGGTAAACCTGA...GTCACATTGTAAGTGCTTAAATGGCCACATGGTTACCATGTTGCACAGTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACCATGTTCTTGATAGAGCTTTaGACACTCGGGATGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ARVEIQALLSALCNMVTMFLIEL*TLGMKA Trigger: CGCTTTCATCCCGAGTGTCCAAAGCTCTATCAAGAA...CATGGTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTACCATTTCCACTGCTTTaGCTTGTTTCGACACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSARVEIQALLSALCNMVPFPLL*LVSTQA Trigger: AGCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGG...TACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATAGCAGCTTCAGTTCATaGGCCTTCCTGAATGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGIILGTVKAVFVVFSVDSSFSS*AFLNAS Trigger: GCTTGCATTCAGGAAGGCCCATGAACTGAAGCTGCT...ATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CCA 90 bp | TCTGCACTGTGCAACATGGTAACCATGTGGCCATTTAAGCACTTACAATGTGACATCCACTGCTTGTACTaGACTTCAGAAAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SALCNMVTMWPFKHLQCDIHCLY*TSESSF Trigger: GAAGCTGCTTTCTGAAGTCCAGTACAAGCAGTGGAT...GTCACATTGTAAGTGCTTAAATGGCCACATGGTTACCATGTTGCACAGTGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR CAA 72 bp | CGAAGATTGTACACATTCTCCTCTATCACTTCTGATTaGTTTGATAAACAGCTGATGGCTGGGCAGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRLYTFSSITSD*FDKQLMAGQES Trigger: ACTCTCCTGCCCAGCCATCAGCTGTTTATCAAACAAATCAGAAGTGATAGAGGAGAATGTGTACAATCTTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | GTTGGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATTACAAACAGCTCTGCTaGCTGTCCCTGCAACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGIILGTVKAVFVVFSVDYKQLC*LSLQHF Trigger: AAAATGTTGCAGGGACAGTCAGCAGAGCTGTTTGTA...ATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | ATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACCATGTGGCCATTTAAGTACAAACAGCTCTGCTaGCTGTCCCTGCAACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQALLSALCNMVTMWPFKYKQLC*LSLQHF Trigger: AAAATGTTGCAGGGACAGTCAGCAGAGCTGTTTGTA...CTTAAATGGCCACATGGTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR GCA 90 bp | GGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATTTTATGGGCCTTCCTGAATaGAAGCATGGTTCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIILGTVKAVFVVFSVDFMGLPE*KHGSFQ Trigger: CTGGAAAGAACCATGCTTGCATTCAGGAAGGCCCAT...AAAATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | GGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATTTTACTTTCACTCCACTCTaGCCAAGAAATCCACAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GIILGTVKAVFVVFSVDFTFTPL*PRNPQG Trigger: CCCTTGTGGATTTCTTGGGCAGAGTGGAGTGAAAGT...AAAATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTATGTTCTTCACCTGGTTaGGACTCGATCTCTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSARVEIQALLSALCNMVCSSPG*DSISNS Trigger: AGAATTAGAGATCGAGTCCCAACCAGGTGAAGAACA...TACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | GGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATTTTATCCACTGCTTGTACTaGACTTCAGAAAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GIILGTVKAVFVVFSVDFIHCLY*TSESSF Trigger: GAAGCTGCTTTCTGAAGTCCAGTACAAGCAGTGGAT...AAAATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR TCA 90 bp | GTTGGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATGCAAAATCAAATAGCTaGGCAATAGCAAGAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGIILGTVKAVFVVFSVDAKSNS*AIARSD Trigger: GTCACTTCTTGCTATTGCTCAGCTATTTGATTTTGC...ATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR GCA 90 bp | GCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAACCATGGCTTTTTCAAATTCTTaGTTCTCCTTTCTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARVEIQALLSALCNMVTMAFSNS*FSFLSF Trigger: GAAACTGAGAAAGGAGAAGCAAGAATTTGAAAAAGC...CATGGTTACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTACCTTCTGTAGATCTTTaGCAAAATCAAATAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSARVEIQALLSALCNMVPSVDL*QNQIAE Trigger: CTCAGCTATTTGATTTTGCCAAAGATCTACAGAAGG...TACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| 3UTR CAA 72 bp | GCGTTGCCTCCTGCATGTGATGCTGGAAAGAGCAAATaGGCAAATTTTGTTCTTTTACCTAATTCAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: ALPPACDAGKSK*ANFVLLPNSVI Trigger: AATTACTGAATTAGGTAAAAGAACAAAATTTGCCAATTTGCTCTTTCCAGCATCACATGCAGGAGGCAACGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| 3UTR CAA 72 bp | ACTGTTATTTTTATGAAGCATCACCTGCATCGAAGATaGTACACATTCTCCTCTATCACTTCTGATTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVIFMKHHLHRR*YTFSSITSDLF Trigger: AAACAAATCAGAAGTGATAGAGGAGAATGTGTACAATCTTCGATGCAGGTGATGCTTCATAAAAATAACAGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS CCA 90 bp | ACACCGCGCAGCACCTCTCTTCCCTTCGGCCCATTTCCACTGCTTTaGCTTGTTTCGACACAGGCTGTTCTTCACCTGGTTGGGACTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TPRSTSLPFGPFPLL*LVSTQAVLHLVGTR Trigger: TCGAGTCCCAACCAGGTGAAGAACAGCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGGGCCGAAGGGAAGAGAGGTGCTGCGCGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS GCA 90 bp | CTCATACACCGCGCAGCACCTCTCTTCCCTTCGGCCCATTTCCACTaGTTTGGCTTGTTTCGACACAGGCTGTTCTTCACCTGGTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LIHRAAPLFPSAHFH*FGLFRHRLFFTWLG Trigger: TCCCAACCAGGTGAAGAACAGCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGGGCCGAAGGGAAGAGAGGTGCTGCGCGGTGTATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTGTCACTCATCTTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCCCCATTTCCACTGCTTaGGCTTGTTTCGACACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLIFQVSLFPAGEGRRPISTA*ACFDTG Trigger: GCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGGG...GCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAAGATGAGTGACAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CAA 90 bp | ATCCTCCATGCCATTCTTGGCCTGTCCATCCTTGGGGTAAATCGTTTCCTGTGCAGGTCGGAAGCCTTCTaGATGATAGCCTTAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILHAILGLSILGVNRFLCRSEAF*MIALIS Trigger: GGAGATTAAGGCTATCATCAAGAAGGCTTCCGACCT...GCACAGGAAACGATTTACCCCAAGGATGGACAGGCCAAGAATGGCATGGAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCATTTAAGCACTTACAATGTGACAAGTGTGGCCCCTCTTAGAGGCACATTCCACTGCTTTGGCTaGTTTCGACACAGGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGHLSTYNVTSVAPLRGTFHCFG*FRHRLF Trigger: GAACAGCCTGTGTCGAAACAAGCCAAAGCAGTGGAA...TGTGCCTCTAAGAGGGGCCACACTTGTCACATTGTAAGTGCTTAAATGGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTGTCCATCCTTGGGGTAAATCGTTTCCTGTGCCACCTCAACCTTCTTAAAGTTCTCCGATGTATTTaGTATTCTAGGTCGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLSILGVNRFLCHLNLLKVLRCI*YSRSEA Trigger: GGCTTCCGACCTAGAATACAAAATACATCGGAGAAC...TTTAAGAAGGTTGAGGTGGCACAGGAAACGATTTACCCCAAGGATGGACAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTACCCATTTCCACTGCTTaGGCTTGTTTCGACACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSARVEIQALLSALCNMVPISTA*ACFDTG Trigger: GCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGGG...TACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CAA 90 bp | GATACAGGAAAAGAAGTCACTGTTCAGCCTCACTTCGGTGATCTAAGTGACTTTTTCCACTGCTTTGGCTaGTTTCGACACAGGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DTGKEVTVQPHFGDLSDFFHCFG*FRHRLF Trigger: GAACAGCCTGTGTCGAAACAAGCCAAAGCAGTGGAA...AAAGTCACTTAGATCACCGAAGTGAGGCTGAACAGTGACTTCTTTTCCTGTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAAGGTCGGAAGCCTTCTaGATGATAGCCTTAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSARVEIQALLSALCNMVRSEAF*MIALIS Trigger: GGAGATTAAGGCTATCATCAAGAAGGCTTCCGACCT...TACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGCAAGGGTGGAAATACAAGCTCTATTATCTGCACTGTGCAACATGGTAGTTCTCCGATGTATTTaGTATTCTAGGTCGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSARVEIQALLSALCNMVVLRCI*YSRSEA Trigger: GGCTTCCGACCTAGAATACAAAATACATCGGAGAAC...TACCATGTTGCACAGTGCAGATAATAGAGCTTGTATTTCCACCCTTGCAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCACTGTGCAACATGGTAACCATGTGGCCATTTAAGCACTTACAATGTGACATCGGTGTGCAGAGCTaGAAGGTCATCATAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SALCNMVTMWPFKHLQCDIGVQS*KVIINF Trigger: GAAATTTATGATGACCTTCAAGCTCTGCACACCGAT...GTCACATTGTAAGTGCTTAAATGGCCACATGGTTACCATGTTGCACAGTGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108241.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAAGTCTCCCTTTTTCCTGCAGGTGAAGGAAGGCGCTATTTCTTGAATGATGGCTTTTTCAAATTCTaGCTTCTCCTTTCTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FQVSLFPAGEGRRYFLNDGFFKF*LLLSQF Trigger: AAACTGAGAAAGGAGAAGCAAGAATTTGAAAAAGCC...ATCATTCAAGAAATAGCGCCTTCCTTCACCTGCAGGAAAAAGGGAGACTTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS-3UTR CAA 90 bp | GTTGGGATAATCTTGGGCACTGTAAAGGCTGTCTTTGTAGTATTCAGTGTTGATATCGGTGTGCAGAGCTaGAAGGTCATCATAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGIILGTVKAVFVVFSVDIGVQS*KVIINF Trigger: GAAATTTATGATGACCTTCAAGCTCTGCACACCGAT...ATCAACACTGAATACTACAAAGACAGCCTTTACAGTGCCCAAGATTATCCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043152.6 |
||
| CDS CAA 90 bp | TACACCGCGCAGCACCTCTCTTCCCTTCGGCCCATTTCCACTGCTTaGGCTTGTTTCGACACAGGCTGTTCTTCACCTGGTTGGGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: YTAQHLSSLRPISTA*ACFDTGCSSPGWDS Trigger: CGAGTCCCAACCAGGTGAAGAACAGCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGGGCCGAAGGGAAGAGAGGTGCTGCGCGGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS GCA 72 bp | CGCGCAGCACCTCTCTTCCCTTCGGCCCATTTCCACTaGTTTGGCTTGTTTCGACACAGGCTGTTCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: RAAPLFPSAHFH*FGLFRHRLFFT Trigger: GGTGAAGAACAGCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGGGCCGAAGGGAAGAGAGGTGCTGCGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS TCA 72 bp | ATTCGGTCCCAGCCTCTGCCACCTGCAGTGCTTCTTTaGAGAGGTCCTGGCGCAGCAACAAGTCAATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: IRSQPLPPAVLL*RGPGAATSQST Trigger: AGTGGATTGACTTGTTGCTGCGCCAGGACCTCTTCAAAGAAGCACTGCAGGTGGCAGAGGCTGGGACCGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS CCA 72 bp | GCCTCTGCCACCTGCAGTGCTTCTTTGAAGAGGTCCTaGCGCAGCAACAAGTCAATCCACTGCTTGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASATCSASLKRS*RSNKSIHCLYW Trigger: CCAGTACAAGCAGTGGATTGACTTGTTGCTGCGCCAGGACCTCTTCAAAGAAGCACTGCAGGTGGCAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS TCA 72 bp | GGAGAGCCAGAGCTGAACATCATCTTTCCACTTCGCTaGAGCACGACCAAAGACACCCTGGACCCGATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GEPELNIIFPLR*STTKDTLDPMY Trigger: GTACATCGGGTCCAGGGTGTCTTTGGTCGTGCTTCAGCGAAGTGGAAAGATGATGTTCAGCTCTGGCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS TCA 72 bp | GGCTTCCTCAAAGCGCATCTCTACATCCGGGCTCTTTaGGTCAATGAGCACCTGGAGCTTCGTCTGCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: GFLKAHLYIRAL*VNEHLELRLPH Trigger: ATGTGGCAGACGAAGCTCCAGGTGCTCATTGACTCAAAGAGCCCGGATGTAGAGATGCGCTTTGAGGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS GCA 72 bp | TGTTACAGAGTCCTTGAACAATTCGGTCCCAGCCTCTaGCACCTGCAGTGCTTCTTTGAAGAGGTCCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CYRVLEQFGPSL*HLQCFFEEVLA Trigger: CGCCAGGACCTCTTCAAAGAAGCACTGCAGGTGGCAGAGGCTGGGACCGAATTGTTCAAGGACTCTGTAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS CCA 72 bp | CACTCTGCCCAAGAAATCCACAAGGGCAGACAAACCTaGGGTTTGAGGTGTGCAAAGGCTTCCTCAAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: HSAQEIHKGRQT*GLRCAKASSKR Trigger: GCGCTTTGAGGAAGCCTTTGCACACCTCAAACCCCAGGTTTGTCTGCCCTTGTGGATTTCTTGGGCAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS CAA 72 bp | CCTCTCTTCCCTTCGGCCCATTTCCACTGCTTTGGCTaGTTTCGACACAGGCTGTTCTTCACCTGGTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PLFPSAHFHCFG*FRHRLFFTWLG Trigger: TCCCAACCAGGTGAAGAACAGCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGGGCCGAAGGGAAGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS CAA 72 bp | CAGCACCTCTCTTCCCTTCGGCCCATTTCCACTGCTTaGGCTTGTTTCGACACAGGCTGTTCTTCACCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QHLSSLRPISTA*ACFDTGCSSPG Trigger: ACCAGGTGAAGAACAGCCTGTGTCGAAACAAGCCAAAGCAGTGGAAATGGGCCGAAGGGAAGAGAGGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||
| CDS CAA 72 bp | AAGAGGTCCTGGCGCAGCAACAAGTCAATCCACTGCTaGTACTGGACTTCAGAAAGCAGCTTCAGTTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: KRSWRSNKSIHC*YWTSESSFSSW Trigger: CCATGAACTGAAGCTGCTTTCTGAAGTCCAGTACAAGCAGTGGATTGACTTGTTGCTGCGCCAGGACCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043152.6 ENSMUST00000108241.8 |
||