Pregenerated sensors for UTP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041438Ensembl transcript IDs: ENSMUST00000047629.7
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGGTGTCGGTGCCTCCTaGGATCAGGGCTGTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSGVGAS*DQGCWA Trigger: AGCCCAACAGCCCTGATCTCAGGAGGCACCGACACC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGAGCCGCTGTCCTCCTaGCCAACACAGGGCTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSEPLSS*PTQGFG Trigger: ACCGAAGCCCTGTGTTGGGCAGGAGGACAGCGGCTC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCCAGGTGGGTGTCGGTaGCTCCTGAGATCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSPGGCR*LLRSGL Trigger: CAGCCCTGATCTCAGGAGGCACCGACACCCACCTGG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTAGGGCTGTTGGGCTGTaGGCCACAGCACGCACGTCA | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSRAVGL*ATARTS Trigger: TGACGTGCGTGCTGTGGCCCACAGCCCAACAGCCCT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGAGAGCCACTGGGGCTaGCGGTCATACTCCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSESHWG*RSYSRW Trigger: CCATCTGGAGTATGACCGCCAGCCCCAGTGGCTCTC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCGTGGACTCCAGCACTaGTACCCGATGCAGCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSRGLQH*YPMQLA Trigger: GGCTAGCTGCATCGGGTACCAGTGCTGGAGTCCACG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGGTATTGGGGGCGATaGCCAGAGCGGTCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSWYWGR*PERSLG Trigger: TCCCAGTGACCGCTCTGGCCATCGCCCCCAATACCA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCCAGGTTGTTGGTATTaGGGGCGATGGCCAGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSPGCWY*GRWPER Trigger: CCGCTCTGGCCATCGCCCCCAATACCAACAACCTGG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCAACCAACCAAAAGTTaGGAGCCACTGGGGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSQPTKS*EPLGLA Trigger: CGCCAGCCCCAGTGGCTCTCAACTTTTGGTTGGTTG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGTGGGAGTTGAGCAATaGTGTCGTCCAGGGGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSVGVEQ*CRPGVA Trigger: AGCGACCCCTGGACGACATCATTGCTCAACTCCCAC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGACACCAGCTGGAAATaGAATACCGTGCCCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSDTSWK*NTVPSA Trigger: CGCCGAGGGCACGGTATTCCATTTCCAGCTGGTGTC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGGCCAGAGCGGTCACTaGGAAGTTGTAAGCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSGQSGH*EVVSRH Trigger: GTGCCTGCTTACAACTTCCCAGTGACCGCTCTGGCC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTATGGGTGGTGGGAGTTaGGCAATGATGTCGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSMGGGS*AMMSSR Trigger: CCTGGACGACATCATTGCTCAACTCCCACCACCCAT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTAAAGTTGAGAGCCACTaGGGCTGGCGGTCATACTCC | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSKVESH*GWRSYS Trigger: GGAGTATGACCGCCAGCCCCAGTGGCTCTCAACTTT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCAGAGTCCACACTTATaGCAGTGCCGTCGGACAAGA | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSQSPHL*QCRRTR Trigger: TCTTGTCCGACGGCACTGTCATAAGTGTGGACTCTG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGGAGCCACAGCTGGTaGAATCCTTGCTTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSWSHSW*NPCFWR Trigger: TCTCCAGAAGCAAGGATTTCACCAGCTGTGGCTCCA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTTCGTCCGCACCCACTaGTTCTCACTGCTGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSFVRTH*FSLLLE Trigger: TTCCAACAGCAGTGAGAAGCAGTGGGTGCGGACGAA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCCCATCTGGACTGACTaGCAAAAGACACATGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSPIWTD*QKTHGL Trigger: GAGGCCATGTGTCTTTTGGCAGTCAGTCCAGATGGG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCGGTCATACTCCAGATaGGTCCTCCAAAGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSRSYSR*VLQRHP Trigger: TGGATGCCTTTGGAGGACCCATCTGGAGTATGACCG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGTCATGGACACCAGCTaGAAATGGAATACCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSVMDTS*KWNTVP Trigger: GGGCACGGTATTCCATTTCCAGCTGGTGTCCATGAC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGGCAGAGCGCAGGAATaGTGGCAATTTGGAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSGRAQE*WQFGNS Trigger: AGAGTTTCCAAATTGCCATCATTCCTGCGCTCTGCC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTATATGCAGAGACCCTTaGTTGGATGCCACAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSICRDP*LDATRS Trigger: GCTCCTTGTGGCATCCAATCAAGGGTCTCTGCATAT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTAGTTCCCATCTGGACTaGCTGCCAAAAGACACATGG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSSSHLD*LPKDTW Trigger: CCATGTGTCTTTTGGCAGTCAGTCCAGATGGGAACT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTACCTGCTGGTCAGAATaGGCAATGACCAGGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSTCWSE*AMTRLL Trigger: CAACAACCTGGTCATTGCTCATTCTGACCAGCAGGT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCCCACTGCTTCTCACTaGTGTTGGAAGTCATGGACA | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSPTASH*CWKSWT Trigger: TGTCCATGACTTCCAACAGCAGTGAGAAGCAGTGGG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTCCACTGTACCTGACTaGGGCTGGAAAGTATGCAAG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSSTVPD*GWKVCK Trigger: CTTGCATACTTTCCAGCCGCAGTCAGGTACAGTGGA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGCTTCTCACTGCTGTTaGAAGTCATGGACACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSASHCC*KSWTPA Trigger: AGCTGGTGTCCATGACTTCCAACAGCAGTGAGAAGC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCTGCCAAAAGACACATaGCCTCCACTGTACCTGACT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSLPKDT*PPLYLT Trigger: AGTCAGGTACAGTGGAGGCCATGTGTCTTTTGGCAG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTAAGCTGCCTTCTTTTTaGACAGGAAATGAGACGCCG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSKLPSF*TGNETP Trigger: CGGCGTCTCATTTCCTGTTCAAAAAGAAGGCAGCTT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCTTCCTTCCGACAGATaGACAATATGCAGAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSLPSDR*TICRDP Trigger: AGGGTCTCTGCATATTGTTCATCTGTCGGAAGGAAG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGGTCAGAATGAGCAATaGCCAGGTTGTTGGTATTGG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSGQNEQ*PGCWYW Trigger: CCAATACCAACAACCTGGTCATTGCTCATTCTGACC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGCAACAGCAATAGACTaGACATCAGCATTTGCGACG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSATAID*TSAFAT Trigger: CGTCGCAAATGCTGATGTGCAGTCTATTGCTGTTGC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGCGGCTGGAAAGTATaGAAGTGCTTGAAGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSCGWKV*KCLKLP Trigger: AGGAAGCTTCAAGCACTTGCATACTTTCCAGCCGCA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGCTGTTGGAAGTCATaGACACCAGCTGGAAATGGA | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSCCWKS*TPAGNG Trigger: TCCATTTCCAGCTGGTGTCCATGACTTCCAACAGCA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTTGAGGTGCAGGAGATaGTCTGCGTTTTTAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSLRCRR*SAFLES Trigger: ACTCTCTAAAAACGCAGATCATCTCCTGCACCTCAA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTCAGAAAACAGAATATaGAGGGCAGAGCGCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSSENRI*RAERRN Trigger: ATTCCTGCGCTCTGCCCTTCATATTCTGTTTTCTGA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGCTTTTCTGGGATGCTaGATTCAAATACCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSAFLGC*IQIPAG Trigger: ACCAGCAGGTATTTGAATTCAGCATCCCAGAAAAGC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTATTGGTCTCTTGGGATaGAAGCTGATGTGTGTGATG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSIGLLG*KLMCVM Trigger: CATCACACACATCAGCTTTCATCCCAAGAGACCAAT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGTGCAGGAGATGATCTaGGTTTTTAGAGAGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSVQEMI*VFREWK Trigger: CTTCCACTCTCTAAAAACGCAGATCATCTCCTGCAC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGGAAAGTATGCAAGTaGTTGAAGCTTCCTTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSWKVCK*LKLPSD Trigger: GTCGGAAGGAAGCTTCAAGCACTTGCATACTTTCCA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCTTTTTGATGGGTGGTaGGAGTTGAGCAATGATGTC | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSLFDGW*ELSNDV Trigger: GACATCATTGCTCAACTCCCACCACCCATCAAAAAG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCACACACCGGATACCTaGTGGAACGTAATTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSHTPDT*WNVIKE Trigger: TTCTTTAATTACGTTCCATCAGGTATCCGGTGTGTG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCATCCAAAGTGTACTTaGTGTTTAGTGCCTGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSHPKCT*CLVPVG Trigger: ACCTACAGGCACTAAACATCAAGTACACTTTGGATG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGCAATGACTTGTCAATaGTGCAGAACATGTAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSAMTCQ*CRTCRH Trigger: ATGCCTACATGTTCTGCATCATTGACAAGTCATTGC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCCTCAAGAAGACATCTaGTTCATTTTTCGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSPQEDI*FIFRRK Trigger: CTTCCTCCGAAAAATGAATCAGATGTCTTCTTGAGG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGTCACTCCCAGGTGTTaGCTATCTAAAACCATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSVTPRC*LSKTIL Trigger: TAAGATGGTTTTAGATAGGCAACACCTGGGAGTGAC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGTAAGCAGGCACTGTaGAGTGAAGCTTTAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSCKQAL*SEALDD Trigger: ATCATCTAAAGCTTCACTGCACAGTGCCTGCTTACA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCCGAGACTCATGACCTaGGAAAAATTTCTCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSPRLMT*EKFLLK Trigger: TTTCAGGAGAAATTTTTCCCAGGTCATGAGTCTCGG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCTTCTTTTTGATGGGTaGTGGGAGTTGAGCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSLLFDG*WELSND Trigger: ATCATTGCTCAACTCCCACCACCCATCAAAAAGAAG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTAACAGCCAATCTGTTTaGCTGATTATTGTAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSNSQSV*LIIVSH Trigger: GTGGCTTACAATAATCAGTCAAACAGATTGGCTGTT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTATTTGGAAGTGGCAATaGCTTGTCAATGATGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSIWKWQ*LVNDAE Trigger: TTCTGCATCATTGACAAGTCATTGCCACTTCCAAAT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTATAAATTTCCACCGTaGCATCTGTTCGTGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSYKFPP*HLFVKQ Trigger: CTGTTTCACGAACAGATGGCACGGTGGAAATTTATA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR GCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGGAAAAGGAGAAGCTaGCTTCTTTTTGAACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSWKRRS*LLFEQE Trigger: TTCCTGTTCAAAAAGAAGGCAGCTTCTCCTTTTCCA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGCGTTTTTAGAGAGTaGAAGAGTATCTCCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSCVFRE*KSISVL Trigger: AAGAACGGAGATACTCTTCCACTCTCTAAAAACGCA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGGAATGATGGCAATTTaGAAACTCTTTGGAGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSGMMAI*KLFGGL Trigger: TAAGCCTCCAAAGAGTTTCCAAATTGCCATCATTCC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCACAAGGAGCTTTGTTaGATCTTCAGAAAACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSHKELC*IFRKQN Trigger: ATTCTGTTTTCTGAAGATTCAACAAAGCTCCTTGTG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGGGCTTATATATCTTTaGCATTTTAAACCCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSGLIYL*HFKPMG Trigger: ACCCATGGGTTTAAAATGTCAAAGATATATAAGCCC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTAATTTGGAAACTCTTTaGAGGCTTATGTTATCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSNLETL*RLMLSR Trigger: ACGCGATAACATAAGCCTCCAAAGAGTTTCCAAATT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGTATACTGCTTTTCTaGGATGCTGAATTCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSCILLF*DAEFKY Trigger: GTATTTGAATTCAGCATCCCAGAAAAGCAGTATACA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS TCA 90 bp | CTCCAGCACTGGTACCCGATGCAGCTAGCCAGTTCCCATCTGGACTaGCTGCCAAAAGACACATGGCCTCCACTGTACCTGACTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQHWYPMQLASSHLD*LPKDTWPPLYLTAA Trigger: AGCCGCAGTCAGGTACAGTGGAGGCCATGTGTCTTTTGGCAGTCAGTCCAGATGGGAACTGGCTAGCTGCATCGGGTACCAGTGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 90 bp | AAGGATTTCTCCGTTCAGTCCAGCACTAAAGAGCCGCTGTCCTCCTaGCCAACACAGGGCTTCGGTACCCCGAGACTCATGACCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KDFSVQSSTKEPLSS*PTQGFGTPRLMTWE Trigger: TTCCCAGGTCATGAGTCTCGGGGTACCGAAGCCCTGTGTTGGGCAGGAGGACAGCGGCTCTTTAGTGCTGGACTGAACGGAGAAATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS CCA 90 bp | GATGCTGGAACGGTTTCGTCCGCACCCACTGCTTCTCACTGCTGTTaGAAGTCATGGACACCAGCTGGAAATGGAATACCGTGCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: DAGTVSSAPTASHCC*KSWTPAGNGIPCPR Trigger: CCGAGGGCACGGTATTCCATTTCCAGCTGGTGTCCATGACTTCCAACAGCAGTGAGAAGCAGTGGGTGCGGACGAAACCGTTCCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS GCA 90 bp | GAGTGTGATGCTGGAACGGTTTCGTCCGCACCCACTGCTTCTCACTaGTGTTGGAAGTCATGGACACCAGCTGGAAATGGAATACCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ECDAGTVSSAPTASH*CWKSWTPAGNGIPC Trigger: GCACGGTATTCCATTTCCAGCTGGTGTCCATGACTTCCAACAGCAGTGAGAAGCAGTGGGTGCGGACGAAACCGTTCCAGCATCACACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS CCA 90 bp | CGGAGCCATCTTCACAACCAACCAAAAGTTGAGAGCCACTGGGGCTaGCGGTCATACTCCAGATGGGTCCTCCAAAGGCATCCAAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSHLHNQPKVESHWG*RSYSRWVLQRHPKC Trigger: ACACTTTGGATGCCTTTGGAGGACCCATCTGGAGTATGACCGCCAGCCCCAGTGGCTCTCAACTTTTGGTTGGTTGTGAAGATGGCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS CCA 90 bp | CACTGCTTCTCACTGCTGTTGGAAGTCATGGACACCAGCTGGAAATaGAATACCGTGCCCTCGGCGGTGCCCACCACAAAACTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HCFSLLLEVMDTSWK*NTVPSAVPTTKLSS Trigger: AGAAGACAGTTTTGTGGTGGGCACCGCCGAGGGCACGGTATTCCATTTCCAGCTGGTGTCCATGACTTCCAACAGCAGTGAGAAGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 90 bp | CACTGCTGTTGGAAGTCATGGACACCAGCTGGAAATGGAATACCGTaGCCTCGGCGGTGCCCACCACAAAACTGTCTTCTTGATCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HCCWKSWTPAGNGIP*PRRCPPQNCLLDQQ Trigger: TTGCTGATCAAGAAGACAGTTTTGTGGTGGGCACCGCCGAGGGCACGGTATTCCATTTCCAGCTGGTGTCCATGACTTCCAACAGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 90 bp | GGGCGATGGCCAGAGCGGTCACTGGGAAGTTGTAAGCAGGCACTGTaGAGTGAAGCTTTAGATGATGCAGATCATATACGTGGACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRWPERSLGSCKQAL*SEALDDADHIRGLQ Trigger: CTGGAGTCCACGTATATGATCTGCATCATCTAAAGCTTCACTGCACAGTGCCTGCTTACAACTTCCCAGTGACCGCTCTGGCCATCGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 90 bp | TGGAATACCGTGCCCTCGGCGGTGCCCACCACAAAACTGTCTTCTTaGTCAGCAACAGCAATAGACTGCACATCAGCATTTGCGACGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WNTVPSAVPTTKLSS*SATAIDCTSAFATR Trigger: TCTCGTCGCAAATGCTGATGTGCAGTCTATTGCTGTTGCTGATCAAGAAGACAGTTTTGTGGTGGGCACCGCCGAGGGCACGGTATTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 90 bp | AAGCTGATGTGTGTGATGGGAGTATCCCTTTGGAGCCACAGCTGGTaGAATCCTTGCTTCTGGAGAGAGCGGCTCCACTCTGTATACTGC | + |
|
Preference number: 5 (lower is better) Translates to: KLMCVMGVSLWSHSW*NPCFWRERLHSVYC Trigger: GCAGTATACAGAGTGGAGCCGCTCTCTCCAGAAGCAAGGATTTCACCAGCTGTGGCTCCAAAGGGATACTCCCATCACACACATCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 90 bp | GGGTGGTGGGAGTTGAGCAATGATGTCGTCCAGGGGTCGCTCTACTaGCACAAGTGTCCTTTCATCCAAAAGATCCATAAAGAGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GWWELSNDVVQGSLY*HKCPFIQKIHKEQG Trigger: CCCTTGCTCTTTATGGATCTTTTGGATGAAAGGACACTTGTGGCAGTAGAGCGACCCCTGGACGACATCATTGCTCAACTCCCACCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 90 bp | TGGCCTCCACTGTACCTGACTGCGGCTGGAAAGTATGCAAGTGCTTaGAGCTTCCTTCCGACAGATGAACAATATGCAGAGACCCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: WPPLYLTAAGKYASA*SFLPTDEQYAETLD Trigger: ATCAAGGGTCTCTGCATATTGTTCATCTGTCGGAAGGAAGCTTCAAGCACTTGCATACTTTCCAGCCGCAGTCAGGTACAGTGGAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 90 bp | TTCTTGCCTGTTGCAGATGTGGATCCTAGTCTCCACAGTTCCAAGTaGTGCGCGAACTGGAAAAGGAGAAGCTGCCTTCTTTTTGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: FLPVADVDPSLHSSK*CANWKRRSCLLFEQ Trigger: CTGTTCAAAAAGAAGGCAGCTTCTCCTTTTCCAGTTCGCGCATCACTTGGAACTGTGGAGACTAGGATCCACATCTGCAACAGGCAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 90 bp | CTGCAGATAATGTTCTCAGGGCCCTTTGTCTTGAGGTGCAGGAGATaGTCTGCGTTTTTAGAGAGTGGAAGAGTATCTCCGTTCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQIMFSGPFVLRCRR*SAFLESGRVSPFLP Trigger: AGGCAAGAACGGAGATACTCTTCCACTCTCTAAAAACGCAGATCATCTCCTGCACCTCAAGACAAAGGGCCCTGAGAACATTATCTGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 90 bp | GATAATGTTCTCAGGGCCCTTTGTCTTGAGGTGCAGGAGATGATCTaGGTTTTTAGAGAGTGGAAGAGTATCTCCGTTCTTGCCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DNVLRALCLEVQEMI*VFREWKSISVLACC Trigger: GCAACAGGCAAGAACGGAGATACTCTTCCACTCTCTAAAAACGCAGATCATCTCCTGCACCTCAAGACAAAGGGCCCTGAGAACATTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 90 bp | GTCAATGATGCAGAACATGTAGGCATCATGGAGGAGGATGTGCATTaGTCTCTTGGGATGAAAGCTGATGTGTGTGATGGGAGTATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VNDAEHVGIMEEDVH*SLGMKADVCDGSIP Trigger: AGGGATACTCCCATCACACACATCAGCTTTCATCCCAAGAGACCAATGCACATCCTCCTCCATGATGCCTACATGTTCTGCATCATTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 90 bp | CGGTCATACTCCAGATGGGTCCTCCAAAGGCATCCAAAGTGTACTTaGTGTTTAGTGCCTGTAGGTCATACTCAAGGATTTCTCCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSYSRWVLQRHPKCT*CLVPVGHTQGFLRS Trigger: TGAACGGAGAAATCCTTGAGTATGACCTACAGGCACTAAACATCAAGTACACTTTGGATGCCTTTGGAGGACCCATCTGGAGTATGACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 90 bp | GCAACACCCCACACTATGCACCTGGACTTAGTCACTCCCAGGTGTTaGCTATCTAAAACCATCTTACGAATTATGCTCCCTGATTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ATPHTMHLDLVTPRC*LSKTILRIMLPDLT Trigger: TGTCAAATCAGGGAGCATAATTCGTAAGATGGTTTTAGATAGGCAACACCTGGGAGTGACTAAGTCCAGGTGCATAGTGTGGGGTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTACCAGGTTGTTGGTATaGGGGGCGATGGCCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSTRLLV*GAMARA Trigger: CGCTCTGGCCATCGCCCCCAATACCAACAACCTGGT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGCAATGACCAGGTTGTaGGTATTGGGGGCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSAMTRL*VLGAMA Trigger: GGCCATCGCCCCCAATACCAACAACCTGGTCATTGC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTACAACCAACCAAAAGTaGAGAGCCACTGGGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSTTNQK*RATGAG Trigger: GCCAGCCCCAGTGGCTCTCAACTTTTGGTTGGTTGT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGATGGGTGGTGGGAGTaGAGCAATGATGTCGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSDGWWE*SNDVVQ Trigger: CTGGACGACATCATTGCTCAACTCCCACCACCCATC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS TCA 90 bp | TTGGATGCCACAAGGAGCTTTGTTGAATCTTCAGAAAACAGAATATaGAGGGCAGAGCGCAGGAATGATGGCAATTTGGAAACTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LDATRSFVESSENRI*RAERRNDGNLETLW Trigger: CCAAAGAGTTTCCAAATTGCCATCATTCCTGCGCTCTGCCCTTCATATTCTGTTTTCTGAAGATTCAACAAAGCTCCTTGTGGCATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTTGCTTCTCACTGCTGTaGGAAGTCATGGACACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSCFSLL*EVMDTS Trigger: GCTGGTGTCCATGACTTCCAACAGCAGTGAGAAGCA...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGATGGGAGTATCCCTTaGGAGCCACAGCTGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSDGSIP*EPQLVK Trigger: TTTCACCAGCTGTGGCTCCAAAGGGATACTCCCATC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS TCA 90 bp | TATAAAGCACAGTTTTCTCATTTGGAAGTGGCAATGACTTGTCAATaGTGCAGAACATGTAGGCATCATGGAGGAGGATGTGCATTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YKAQFSHLEVAMTCQ*CRTCRHHGGGCALV Trigger: GACCAATGCACATCCTCCTCCATGATGCCTACATGTTCTGCATCATTGACAAGTCATTGCCACTTCCAAATGAGAAAACTGTGCTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTAATATGCAGAGACCCTaGATTGGATGCCACAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSNMQRP*IGCHKE Trigger: CTCCTTGTGGCATCCAATCAAGGGTCTCTGCATATT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS CCA 90 bp | TCCATAAAGAGCAAGGGCTTATATATCTTTGACATTTTAAACCCATaGGTTGTCCGCCTCAAGAAGACATCTGATTCATTTTTCGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SIKSKGLYIFDILNP*VVRLKKTSDSFFGG Trigger: TCCTCCGAAAAATGAATCAGATGTCTTCTTGAGGCGGACAACCCATGGGTTTAAAATGTCAAAGATATATAAGCCCTTGCTCTTTATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGGAAGTGGCAATGACTaGTCAATGATGCAGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSGSGND*SMMQNM Trigger: CATGTTCTGCATCATTGACAAGTCATTGCCACTTCC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTAGGAATGATGGCAATTaGGAAACTCTTTGGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSRNDGN*ETLWRL Trigger: AAGCCTCCAAAGAGTTTCCAAATTGCCATCATTCCT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGCACAGTTTTCTCATTaGGAAGTGGCAATGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSAQFSH*EVAMTC Trigger: ACAAGTCATTGCCACTTCCAAATGAGAAAACTGTGC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTGAGAATCCGACTTTTTaGCCGATCAAAATTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSENPTF*PIKISC Trigger: GCAAGAAATTTTGATCGGCAAAAAAGTCGGATTCTC...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTATTATGCTCCCTGATTaGACATCAAACACGCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSIMLPD*TSNTLM Trigger: CATTAGCGTGTTTGATGTCAAATCAGGGAGCATAAT...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS-3UTR CAA 90 bp | CAAACAAACAAACAAAACAACAGGATAGACAGTTCAAGAAAGGACACAGACAGTCACAAAACTGTCTTCTaGATCAGCAACAGCAATAGA | + |
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Preference number: 5 (lower is better) Translates to: QTNKQNNRIDSSRKDTDSHKTVF*ISNSNR Trigger: TCTATTGCTGTTGCTGATCAAGAAGACAGTTTTGTG...ACTGTCTGTGTCCTTTCTTGAACTGTCTATCCTGTTGTTTTGTTTGTTTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 72 bp | TCCGTTCAGTCCAGCACTAAAGAGCCGCTGTCCTCCTaGCCAACACAGGGCTTCGGTACCCCGAGACTCATG | + |
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Preference number: 6 (lower is better) Translates to: SVQSSTKEPLSS*PTQGFGTPRLM Trigger: CATGAGTCTCGGGGTACCGAAGCCCTGTGTTGGGCAGGAGGACAGCGGCTCTTTAGTGCTGGACTGAACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | ACCTCCACTCTCTCCATGAGAGGCCGAATAACCAGGTaGGTGTCGGTGCCTCCTGAGATCAGGGCTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: TSTLSMRGRITR*VSVPPEIRAVG Trigger: CCCAACAGCCCTGATCTCAGGAGGCACCGACACCCACCTGGTTATTCGGCCTCTCATGGAGAGAGTGGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | TGCTTCTCACTGCTGTTGGAAGTCATGGACACCAGCTaGAAATGGAATACCGTGCCCTCGGCGGTGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: CFSLLLEVMDTS*KWNTVPSAVPT Trigger: GGTGGGCACCGCCGAGGGCACGGTATTCCATTTCCAGCTGGTGTCCATGACTTCCAACAGCAGTGAGAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | TGGTACCCGATGCAGCTAGCCAGTTCCCATCTGGACTaGCTGCCAAAAGACACATGGCCTCCACTGTACCTG | + |
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Preference number: 6 (lower is better) Translates to: WYPMQLASSHLD*LPKDTWPPLYL Trigger: CAGGTACAGTGGAGGCCATGTGTCTTTTGGCAGTCAGTCCAGATGGGAACTGGCTAGCTGCATCGGGTACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 72 bp | GCTGGAACGGTTTCGTCCGCACCCACTGCTTCTCACTaGTGTTGGAAGTCATGGACACCAGCTGGAAATGGA | + |
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Preference number: 6 (lower is better) Translates to: AGTVSSAPTASH*CWKSWTPAGNG Trigger: TCCATTTCCAGCTGGTGTCCATGACTTCCAACAGCAGTGAGAAGCAGTGGGTGCGGACGAAACCGTTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | TCACTGCTGTTGGAAGTCATGGACACCAGCTGGAAATaGAATACCGTGCCCTCGGCGGTGCCCACCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: SLLLEVMDTSWK*NTVPSAVPTTK Trigger: TTTTGTGGTGGGCACCGCCGAGGGCACGGTATTCCATTTCCAGCTGGTGTCCATGACTTCCAACAGCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | GTTGTTGGTATTGGGGGCGATGGCCAGAGCGGTCACTaGGAAGTTGTAAGCAGGCACTGTGCAGTGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VVGIGGDGQSGH*EVVSRHCAVKL Trigger: AAGCTTCACTGCACAGTGCCTGCTTACAACTTCCCAGTGACCGCTCTGGCCATCGCCCCCAATACCAACAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | CCCACAACTGCACCTTTCCAACAGAGTCCACACTTATaGCAGTGCCGTCGGACAAGAAGGCAACACCCCACA | + |
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Preference number: 6 (lower is better) Translates to: PTTAPFQQSPHL*QCRRTRRQHPT Trigger: TGTGGGGTGTTGCCTTCTTGTCCGACGGCACTGTCATAAGTGTGGACTCTGTTGGAAAGGTGCAGTTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 72 bp | ACACCAGCTGGAAATGGAATACCGTGCCCTCGGCGGTaGCCACCACAAAACTGTCTTCTTGATCAGCAACAG | + |
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Preference number: 6 (lower is better) Translates to: TPAGNGIPCPRR*PPQNCLLDQQQ Trigger: CTGTTGCTGATCAAGAAGACAGTTTTGTGGTGGGCACCGCCGAGGGCACGGTATTCCATTTCCAGCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 72 bp | TGGAAGTCATGGACACCAGCTGGAAATGGAATACCGTaGCCTCGGCGGTGCCCACCACAAAACTGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: WKSWTPAGNGIP*PRRCPPQNCLL Trigger: AAGAAGACAGTTTTGTGGTGGGCACCGCCGAGGGCACGGTATTCCATTTCCAGCTGGTGTCCATGACTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | CTTCACAACCAACCAAAAGTTGAGAGCCACTGGGGCTaGCGGTCATACTCCAGATGGGTCCTCCAAAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LHNQPKVESHWG*RSYSRWVLQRH Trigger: ATGCCTTTGGAGGACCCATCTGGAGTATGACCGCCAGCCCCAGTGGCTCTCAACTTTTGGTTGGTTGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | AGCCATCTTCACAACCAACCAAAAGTTGAGAGCCACTaGGGCTGGCGGTCATACTCCAGATGGGTCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SHLHNQPKVESH*GWRSYSRWVLQ Trigger: TTGGAGGACCCATCTGGAGTATGACCGCCAGCCCCAGTGGCTCTCAACTTTTGGTTGGTTGTGAAGATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | ACGGTTTCGTCCGCACCCACTGCTTCTCACTGCTGTTaGAAGTCATGGACACCAGCTGGAAATGGAATACCG | + |
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Preference number: 6 (lower is better) Translates to: TVSSAPTASHCC*KSWTPAGNGIP Trigger: CGGTATTCCATTTCCAGCTGGTGTCCATGACTTCCAACAGCAGTGAGAAGCAGTGGGTGCGGACGAAACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 72 bp | GGGAGTATCCCTTTGGAGCCACAGCTGGTGAAATCCTaGCTTCTGGAGAGAGCGGCTCCACTCTGTATACTG | + |
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Preference number: 6 (lower is better) Translates to: GSIPLEPQLVKS*LLERAAPLCIL Trigger: CAGTATACAGAGTGGAGCCGCTCTCTCCAGAAGCAAGGATTTCACCAGCTGTGGCTCCAAAGGGATACTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 90 bp | ATGGAATACCGTGCCCTCGGCGGTGCCCACCACAAAACTGTCTTCTaGATCAGCAACAGCAATAGACTGCACATCAGCATTTGCGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: MEYRALGGAHHKTVF*ISNSNRLHISICDE Trigger: CTCGTCGCAAATGCTGATGTGCAGTCTATTGCTGTTGCTGATCAAGAAGACAGTTTTGTGGTGGGCACCGCCGAGGGCACGGTATTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | GTGGAAGAGTATCTCCGTTCTTGCCTGTTGCAGATGTaGATCCTAGTCTCCACAGTTCCAAGTGATGCGCGA | + |
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Preference number: 6 (lower is better) Translates to: VEEYLRSCLLQM*ILVSTVPSDAR Trigger: TCGCGCATCACTTGGAACTGTGGAGACTAGGATCCACATCTGCAACAGGCAAGAACGGAGATACTCTTCCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | TTAGATGATGCAGATCATATACGTGGACTCCAGCACTaGTACCCGATGCAGCTAGCCAGTTCCCATCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LDDADHIRGLQH*YPMQLASSHLD Trigger: GTCCAGATGGGAACTGGCTAGCTGCATCGGGTACCAGTGCTGGAGTCCACGTATATGATCTGCATCATCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 72 bp | GGGATGAAAGCTGATGTGTGTGATGGGAGTATCCCTTaGGAGCCACAGCTGGTGAAATCCTTGCTTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GMKADVCDGSIP*EPQLVKSLLLE Trigger: CTCCAGAAGCAAGGATTTCACCAGCTGTGGCTCCAAAGGGATACTCCCATCACACACATCAGCTTTCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | GTTGCAGATGTGGATCCTAGTCTCCACAGTTCCAAGTaGTGCGCGAACTGGAAAAGGAGAAGCTGCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VADVDPSLHSSK*CANWKRRSCLL Trigger: AAGAAGGCAGCTTCTCCTTTTCCAGTTCGCGCATCACTTGGAACTGTGGAGACTAGGATCCACATCTGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 72 bp | CCTTGCTTCTGGAGAGAGCGGCTCCACTCTGTATACTaGTTTTCTGGGATGCTGAATTCAAATACCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PCFWRERLHSVY*FSGMLNSNTCW Trigger: CCAGCAGGTATTTGAATTCAGCATCCCAGAAAAGCAGTATACAGAGTGGAGCCGCTCTCTCCAGAAGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | GCAGAACATGTAGGCATCATGGAGGAGGATGTGCATTaGTCTCTTGGGATGAAAGCTGATGTGTGTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: AEHVGIMEEDVH*SLGMKADVCDG Trigger: CCCATCACACACATCAGCTTTCATCCCAAGAGACCAATGCACATCCTCCTCCATGATGCCTACATGTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | CTGTACCTGACTGCGGCTGGAAAGTATGCAAGTGCTTaGAGCTTCCTTCCGACAGATGAACAATATGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LYLTAAGKYASA*SFLPTDEQYAE Trigger: CTCTGCATATTGTTCATCTGTCGGAAGGAAGCTTCAAGCACTTGCATACTTTCCAGCCGCAGTCAGGTACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | TCTGGGATGCTGAATTCAAATACCTGCTGGTCAGAATaGGCAATGACCAGGTTGTTGGTATTGGGGGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: SGMLNSNTCWSE*AMTRLLVLGAM Trigger: CATCGCCCCCAATACCAACAACCTGGTCATTGCTCATTCTGACCAGCAGGTATTTGAATTCAGCATCCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 72 bp | CTCAGGGCCCTTTGTCTTGAGGTGCAGGAGATGATCTaGGTTTTTAGAGAGTGGAAGAGTATCTCCGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LRALCLEVQEMI*VFREWKSISVL Trigger: AAGAACGGAGATACTCTTCCACTCTCTAAAAACGCAGATCATCTCCTGCACCTCAAGACAAAGGGCCCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 72 bp | CCAGAGCGGTCACTGGGAAGTTGTAAGCAGGCACTGTaGAGTGAAGCTTTAGATGATGCAGATCATATACGT | + |
|
Preference number: 6 (lower is better) Translates to: PERSLGSCKQAL*SEALDDADHIR Trigger: ACGTATATGATCTGCATCATCTAAAGCTTCACTGCACAGTGCCTGCTTACAACTTCCCAGTGACCGCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 72 bp | CCACCGTGCCATCTGTTCGTGAAACAGCCAATCTGTTaGACTGATTATTGTAAGCCACACACCGGATACCTG | + |
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Preference number: 6 (lower is better) Translates to: PPCHLFVKQPIC*TDYCKPHTGYL Trigger: CAGGTATCCGGTGTGTGGCTTACAATAATCAGTCAAACAGATTGGCTGTTTCACGAACAGATGGCACGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 72 bp | AGTTCCAAATTTCTTCTTTTTGATGGGTGGTGGGAGTaGAGCAATGATGTCGTCCAGGGGTCGCTCTACTGC | + |
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Preference number: 6 (lower is better) Translates to: SSKFLLFDGWWE*SNDVVQGSLYC Trigger: GCAGTAGAGCGACCCCTGGACGACATCATTGCTCAACTCCCACCACCCATCAAAAAGAAGAAATTTGGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 90 bp | GCGGTCATACTCCAGATGGGTCCTCCAAAGGCATCCAAAGTGTACTaGATGTTTAGTGCCTGTAGGTCATACTCAAGGATTTCTCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AVILQMGPPKASKVY*MFSACRSYSRISPF Trigger: GAACGGAGAAATCCTTGAGTATGACCTACAGGCACTAAACATCAAGTACACTTTGGATGCCTTTGGAGGACCCATCTGGAGTATGACCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 72 bp | TTGATCAGCAACAGCAATAGACTGCACATCAGCATTTaGGACGAGATGACTCTTAACGAGTGTCCCAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LISNSNRLHISI*DEMTLNECPSS Trigger: GCTACTGGGACACTCGTTAAGAGTCATCTCGTCGCAAATGCTGATGTGCAGTCTATTGCTGTTGCTGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS GCA 72 bp | GAGTTGAGCAATGATGTCGTCCAGGGGTCGCTCTACTaGCACAAGTGTCCTTTCATCCAAAAGATCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: ELSNDVVQGSLY*HKCPFIQKIHK Trigger: TTTATGGATCTTTTGGATGAAAGGACACTTGTGGCAGTAGAGCGACCCCTGGACGACATCATTGCTCAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | CTTGAGGTGCAGGAGATGATCTGCGTTTTTAGAGAGTaGAAGAGTATCTCCGTTCTTGCCTGTTGCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: LEVQEMICVFRE*KSISVLACCRC Trigger: ACATCTGCAACAGGCAAGAACGGAGATACTCTTCCACTCTCTAAAAACGCAGATCATCTCCTGCACCTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 72 bp | TCTGCGTTTTTAGAGAGTGGAAGAGTATCTCCGTTCTaGCCTGTTGCAGATGTGGATCCTAGTCTCCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: SAFLESGRVSPF*PVADVDPSLHS Trigger: ACTGTGGAGACTAGGATCCACATCTGCAACAGGCAAGAACGGAGATACTCTTCCACTCTCTAAAAACGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 72 bp | CTCCAGATGGGTCCTCCAAAGGCATCCAAAGTGTACTaGATGTTTAGTGCCTGTAGGTCATACTCAAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: LQMGPPKASKVY*MFSACRSYSRI Trigger: AATCCTTGAGTATGACCTACAGGCACTAAACATCAAGTACACTTTGGATGCCTTTGGAGGACCCATCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 90 bp | GAACAATATGCAGAGACCCTTGATTGGATGCCACAAGGAGCTTTGTaGAATCTTCAGAAAACAGAATATGAAGGGCAGAGCGCAGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: EQYAETLDWMPQGAL*NLQKTEYEGQSAGM Trigger: CATTCCTGCGCTCTGCCCTTCATATTCTGTTTTCTGAAGATTCAACAAAGCTCCTTGTGGCATCCAATCAAGGGTCTCTGCATATTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 90 bp | GATGAACAATATGCAGAGACCCTTGATTGGATGCCACAAGGAGCTTaGTTGAATCTTCAGAAAACAGAATATGAAGGGCAGAGCGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DEQYAETLDWMPQGA*LNLQKTEYEGQSAG Trigger: TCCTGCGCTCTGCCCTTCATATTCTGTTTTCTGAAGATTCAACAAAGCTCCTTGTGGCATCCAATCAAGGGTCTCTGCATATTGTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | TCCAGATGGGTCCTCCAAAGGCATCCAAAGTGTACTTaGTGTTTAGTGCCTGTAGGTCATACTCAAGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: SRWVLQRHPKCT*CLVPVGHTQGF Trigger: AAATCCTTGAGTATGACCTACAGGCACTAAACATCAAGTACACTTTGGATGCCTTTGGAGGACCCATCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | GAATATGAAGGGCAGAGCGCAGGAATGATGGCAATTTaGAAACTCTTTGGAGGCTTATGTTATCGCGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: EYEGQSAGMMAI*KLFGGLCYRVH Trigger: ATGAACGCGATAACATAAGCCTCCAAAGAGTTTCCAAATTGCCATCATTCCTGCGCTCTGCCCTTCATATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 90 bp | TATAAATTTCCACCGTGCCATCTGTTCGTGAAACAGCCAATCTGTTaGACTGATTATTGTAAGCCACACACCGGATACCTGATGGAACGT | + |
|
Preference number: 6 (lower is better) Translates to: YKFPPCHLFVKQPIC*TDYCKPHTGYLMER Trigger: ACGTTCCATCAGGTATCCGGTGTGTGGCTTACAATAATCAGTCAAACAGATTGGCTGTTTCACGAACAGATGGCACGGTGGAAATTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | CAGTTTTCTCATTTGGAAGTGGCAATGACTTGTCAATaGTGCAGAACATGTAGGCATCATGGAGGAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: QFSHLEVAMTCQ*CRTCRHHGGGC Trigger: ACATCCTCCTCCATGATGCCTACATGTTCTGCATCATTGACAAGTCATTGCCACTTCCAAATGAGAAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | CTTCCGACAGATGAACAATATGCAGAGACCCTTGATTaGATGCCACAAGGAGCTTTGTTGAATCTTCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPTDEQYAETLD*MPQGALLNLQK Trigger: TTTCTGAAGATTCAACAAAGCTCCTTGTGGCATCCAATCAAGGGTCTCTGCATATTGTTCATCTGTCGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CAA 72 bp | TATGCAGAGACCCTTGATTGGATGCCACAAGGAGCTTaGTTGAATCTTCAGAAAACAGAATATGAAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YAETLDWMPQGA*LNLQKTEYEGQ Trigger: CTGCCCTTCATATTCTGTTTTCTGAAGATTCAACAAAGCTCCTTGTGGCATCCAATCAAGGGTCTCTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | TTCAGAAAACAGAATATGAAGGGCAGAGCGCAGGAATaGTGGCAATTTGGAAACTCTTTGGAGGCTTATGTT | + |
|
Preference number: 6 (lower is better) Translates to: FRKQNMKGRAQE*WQFGNSLEAYV Trigger: AACATAAGCCTCCAAAGAGTTTCCAAATTGCCATCATTCCTGCGCTCTGCCCTTCATATTCTGTTTTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | ACAAGGAGCTTTGTTGAATCTTCAGAAAACAGAATATaGAGGGCAGAGCGCAGGAATGATGGCAATTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TRSFVESSENRI*RAERRNDGNLE Trigger: TTCCAAATTGCCATCATTCCTGCGCTCTGCCCTTCATATTCTGTTTTCTGAAGATTCAACAAAGCTCCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | TTTAAACCCATGGGTTGTCCGCCTCAAGAAGACATCTaGTTCATTTTTCGGAGGAAGTGGATTATAAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FKPMGCPPQEDI*FIFRRKWIIKH Trigger: GTGCTTTATAATCCACTTCCTCCGAAAAATGAATCAGATGTCTTCTTGAGGCGGACAACCCATGGGTTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS CCA 72 bp | AGCAAGGGCTTATATATCTTTGACATTTTAAACCCATaGGTTGTCCGCCTCAAGAAGACATCTGATTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SKGLYIFDILNP*VVRLKKTSDSF Trigger: AAATGAATCAGATGTCTTCTTGAGGCGGACAACCCATGGGTTTAAAATGTCAAAGATATATAAGCCCTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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| CDS TCA 72 bp | ATTATAAAGCACAGTTTTCTCATTTGGAAGTGGCAATaGCTTGTCAATGATGCAGAACATGTAGGCATCATG | + |
|
Preference number: 6 (lower is better) Translates to: IIKHSFLIWKWQ*LVNDAEHVGIM Trigger: CATGATGCCTACATGTTCTGCATCATTGACAAGTCATTGCCACTTCCAAATGAGAAAACTGTGCTTTATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047629.7 |
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