Pregenerated sensors for UTP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070697Ensembl transcript IDs: ENSMUST00000090413.6
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | GAGAGGGCGGCAACCCCAAGTCGTCCTCATTTTCGTCCGTGGCGGTaGGACCTGCCTGGGCCCGCACGGCGGCCCACTGAGCCGCTCCAC | + |
Preference number: 5 (lower is better) Translates to: ERAATPSRPHFRPWR*DLPGPARRPTEPLH Trigger: GTGGAGCGGCTCAGTGGGCCGCCGTGCGGGCCCAGGCAGGTCTCACCGCCACGGACGAAAATGAGGACGACTTGGGGTTGCCGCCCTCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CCA 90 bp | CCTCATCGCCATCCTCCTCCCCACTCTCGACTTCGTTCCAGCCCTTaGCCAGGACTGCCCGAGATCGCGCTTCATGGAACTCATCTACCT | + |
Preference number: 5 (lower is better) Translates to: PHRHPPPHSRLRSSP*PGLPEIALHGTHLP Trigger: AGGTAGATGAGTTCCATGAAGCGCGATCTCGGGCAGTCCTGGCCAAGGGCTGGAACGAAGTCGAGAGTGGGGAGGAGGATGGCGATGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS GCA 90 bp | ATCCTCCTCCCCACTCTCGACTTCGTTCCAGCCCTTGGCCAGGACTaGCCGAGATCGCGCTTCATGGAACTCATCTACCTGGTCTTGGTA | + |
Preference number: 5 (lower is better) Translates to: ILLPTLDFVPALGQD*PRSRFMELIYLVLV Trigger: TACCAAGACCAGGTAGATGAGTTCCATGAAGCGCGATCTCGGGCAGTCCTGGCCAAGGGCTGGAACGAAGTCGAGAGTGGGGAGGAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS GCA 90 bp | CTTCACAACCCTTGTCTCAGCTTCGTCTACCTGGGGCACCGGCTTTaGAAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTTGCAG | + |
Preference number: 5 (lower is better) Translates to: LHNPCLSFVYLGHRL*KGLHPSDSKIILLQ Trigger: CTGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCGGTGCCCCAGGTAGACGAAGCTGAGACAAGGGTTGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CCA 90 bp | GAGATCGCGCTTCATGGAACTCATCTACCTGGTCTTGGTAGTAGCTaGAGTCCCCTGGAGAGGGCGGCAACCCCAAGTCGTCCTCATTTT | + |
Preference number: 5 (lower is better) Translates to: EIALHGTHLPGLGSS*SPLERAATPSRPHF Trigger: AAAATGAGGACGACTTGGGGTTGCCGCCCTCTCCAGGGGACTCCAGCTACTACCAAGACCAGGTAGATGAGTTCCATGAAGCGCGATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS GCA 90 bp | CAGCACGAATGCCAGAGAGTTCACCACTGTACCGCTGTTCTTCTCTaGGAACTTCACGAACCTGGCCTCGTCGTCGGATTTTGGCTTTTC | + |
Preference number: 5 (lower is better) Translates to: QHECQRVHHCTAVLL*ELHEPGLVVGFWLF Trigger: GAAAAGCCAAAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAGAGAAGAACAGCGGTACAGTGGTGAACTCTCTGGCATTCGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS GCA 90 bp | ATCATCCTCTTGCAGGGCTTGGGCCAAGCGCCGCTGAATTATCTGTaGCTCCTCCTCTTCTTCTCTTTCCTCCTCTTCTACTTCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: IILLQGLGQAPLNYL*LLLFFSFLLFYFLL Trigger: CAGCAAGAAGTAGAAGAGGAGGAAAGAGAAGAAGAGGAGGAGGCACAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CCA 90 bp | TGTAACAAGGGTTCTAACTCATCCTTCACCTCTGTCAACTTGGCTTaGAGGTCTTCTATGAGCTCTAAGAGCTCTGGTGATTCTTTCTTC | + |
Preference number: 5 (lower is better) Translates to: CNKGSNSSFTSVNLA*RSSMSSKSSGDSFF Trigger: GAAGAAAGAATCACCAGAGCTCTTAGAGCTCATAGAAGACCTCCAAGCCAAGTTGACAGAGGTGAAGGATGAGTTAGAACCCTTGTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS TCA 90 bp | CTAACTCATCCTTCACCTCTGTCAACTTGGCTTGGAGGTCTTCTATaGGCTCTAAGAGCTCTGGTGATTCTTTCTTCAACATTTTCAGCT | + |
Preference number: 5 (lower is better) Translates to: LTHPSPLSTWLGGLL*ALRALVILSSTFSA Trigger: AGCTGAAAATGTTGAAGAAAGAATCACCAGAGCTCTTAGAGCTCATAGAAGACCTCCAAGCCAAGTTGACAGAGGTGAAGGATGAGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS TCA 72 bp | GCAACCCCAAGTCGTCCTCATTTTCGTCCGTGGCGGTaGGACCTGCCTGGGCCCGCACGGCGGCCCACTGAG | + |
Preference number: 6 (lower is better) Translates to: ATPSRPHFRPWR*DLPGPARRPTE Trigger: CTCAGTGGGCCGCCGTGCGGGCCCAGGCAGGTCTCACCGCCACGGACGAAAATGAGGACGACTTGGGGTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS GCA 72 bp | GACAAGCTAGGGTCCACAGAGGCCTCAGCCTCACTCTaGACGGAGCTTCCGCCGTCATCATCCTCTCCAACC | + |
Preference number: 6 (lower is better) Translates to: DKLGSTEASASL*TELPPSSSSPT Trigger: GGTTGGAGAGGATGATGACGGCGGAAGCTCCGTGCAGAGTGAGGCTGAGGCCTCTGTGGACCCTAGCTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CCA 72 bp | CATCCTCCTCCCCACTCTCGACTTCGTTCCAGCCCTTaGCCAGGACTGCCCGAGATCGCGCTTCATGGAACT | + |
Preference number: 6 (lower is better) Translates to: HPPPHSRLRSSP*PGLPEIALHGT Trigger: AGTTCCATGAAGCGCGATCTCGGGCAGTCCTGGCCAAGGGCTGGAACGAAGTCGAGAGTGGGGAGGAGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 90 bp | CAGGACTGCCCGAGATCGCGCTTCATGGAACTCATCTACCTGGTCTaGGTAGTAGCTGGAGTCCCCTGGAGAGGGCGGCAACCCCAAGTC | + |
Preference number: 6 (lower is better) Translates to: QDCPRSRFMELIYLV*VVAGVPWRGRQPQV Trigger: GACTTGGGGTTGCCGCCCTCTCCAGGGGACTCCAGCTACTACCAAGACCAGGTAGATGAGTTCCATGAAGCGCGATCTCGGGCAGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS GCA 72 bp | CCCACTCTCGACTTCGTTCCAGCCCTTGGCCAGGACTaGCCGAGATCGCGCTTCATGGAACTCATCTACCTG | + |
Preference number: 6 (lower is better) Translates to: PTLDFVPALGQD*PRSRFMELIYL Trigger: CAGGTAGATGAGTTCCATGAAGCGCGATCTCGGGCAGTCCTGGCCAAGGGCTGGAACGAAGTCGAGAGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 90 bp | CGGCTTTGCAAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTaGCAGGGCTTGGGCCAAGCGCCGCTGAATTATCTGTGCCTCCTC | + |
Preference number: 6 (lower is better) Translates to: RLCKGLHPSDSKIIL*QGLGQAPLNYLCLL Trigger: GAGGAGGCACAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS GCA 72 bp | CCTTGTCTCAGCTTCGTCTACCTGGGGCACCGGCTTTaGAAAGGCCTCCACCCAAGCGACTCCAAAATCATC | + |
Preference number: 6 (lower is better) Translates to: PCLSFVYLGHRL*KGLHPSDSKII Trigger: GATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCGGTGCCCCAGGTAGACGAAGCTGAGACAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CCA 72 bp | CTTCATGGAACTCATCTACCTGGTCTTGGTAGTAGCTaGAGTCCCCTGGAGAGGGCGGCAACCCCAAGTCGT | + |
Preference number: 6 (lower is better) Translates to: LHGTHLPGLGSS*SPLERAATPSR Trigger: ACGACTTGGGGTTGCCGCCCTCTCCAGGGGACTCCAGCTACTACCAAGACCAGGTAGATGAGTTCCATGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 72 bp | CACCCAAGCGACTCCAAAATCATCCTCTTGCAGGGCTaGGGCCAAGCGCCGCTGAATTATCTGTGCCTCCTC | + |
Preference number: 6 (lower is better) Translates to: HPSDSKIILLQG*GQAPLNYLCLL Trigger: GAGGAGGCACAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGATTTTGGAGTCGCTTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 72 bp | CCCTTGTCTCAGCTTCGTCTACCTGGGGCACCGGCTTaGCAAAGGCCTCCACCCAAGCGACTCCAAAATCAT | + |
Preference number: 6 (lower is better) Translates to: PLSQLRLPGAPA*QRPPPKRLQNH Trigger: ATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCGGTGCCCCAGGTAGACGAAGCTGAGACAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 90 bp | AAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTTGCAGGGCTaGGGCCAAGCGCCGCTGAATTATCTGTGCCTCCTCCTCTTCTTC | + |
Preference number: 6 (lower is better) Translates to: KGLHPSDSKIILLQG*GQAPLNYLCLLLFF Trigger: GAAGAAGAGGAGGAGGCACAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 90 bp | CCTTCACAACCCTTGTCTCAGCTTCGTCTACCTGGGGCACCGGCTTaGCAAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTTGCA | + |
Preference number: 6 (lower is better) Translates to: PSQPLSQLRLPGAPA*QRPPPKRLQNHPLA Trigger: TGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCGGTGCCCCAGGTAGACGAAGCTGAGACAAGGGTTGTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 72 bp | AAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTaGCAGGGCTTGGGCCAAGCGCCGCTGAATTATCTG | + |
Preference number: 6 (lower is better) Translates to: KGLHPSDSKIIL*QGLGQAPLNYL Trigger: CAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS GCA 72 bp | TGCCAGAGAGTTCACCACTGTACCGCTGTTCTTCTCTaGGAACTTCACGAACCTGGCCTCGTCGTCGGATTT | + |
Preference number: 6 (lower is better) Translates to: CQRVHHCTAVLL*ELHEPGLVVGF Trigger: AAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAGAGAAGAACAGCGGTACAGTGGTGAACTCTCTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 90 bp | TATCTGTGCCTCCTCCTCTTCTTCTCTTTCCTCCTCTTCTACTTCTaGCTGACTCTGACGGCCTCGGGATTTGGAACCATAGTCCGTATC | + |
Preference number: 6 (lower is better) Translates to: YLCLLLFFSFLLFYF*LTLTASGFGTIVRI Trigger: GATACGGACTATGGTTCCAAATCCCGAGGCCGTCAGAGTCAGCAAGAAGTAGAAGAGGAGGAAAGAGAAGAAGAGGAGGAGGCACAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CCA 72 bp | CTGTACCGCTGTTCTTCTCTGCGAACTTCACGAACCTaGCCTCGTCGTCGGATTTTGGCTTTTCTGAACTTT | + |
Preference number: 6 (lower is better) Translates to: LYRCSSLRTSRT*PRRRILAFLNF Trigger: AAAGTTCAGAAAAGCCAAAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAGAGAAGAACAGCGGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 72 bp | CTGCGAACTTCACGAACCTGGCCTCGTCGTCGGATTTaGGCTTTTCTGAACTTTTCCCTATGTTTCACTCTG | + |
Preference number: 6 (lower is better) Translates to: LRTSRTWPRRRI*AFLNFSLCFTL Trigger: CAGAGTGAAACATAGGGAAAAGTTCAGAAAAGCCAAAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 90 bp | ACCAACTGTAACAAGGGTTCTAACTCATCCTTCACCTCTGTCAACTaGGCTTGGAGGTCTTCTATGAGCTCTAAGAGCTCTGGTGATTCT | + |
Preference number: 6 (lower is better) Translates to: TNCNKGSNSSFTSVN*AWRSSMSSKSSGDS Trigger: AGAATCACCAGAGCTCTTAGAGCTCATAGAAGACCTCCAAGCCAAGTTGACAGAGGTGAAGGATGAGTTAGAACCCTTGTTACAGTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 90 bp | TGTTCTTCTCTGCGAACTTCACGAACCTGGCCTCGTCGTCGGATTTaGGCTTTTCTGAACTTTTCCCTATGTTTCACTCTGGGATTTCTA | + |
Preference number: 6 (lower is better) Translates to: CSSLRTSRTWPRRRI*AFLNFSLCFTLGFL Trigger: TAGAAATCCCAGAGTGAAACATAGGGAAAAGTTCAGAAAAGCCAAAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAGAGAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS TCA 72 bp | TCAACTCTTGCCTGTCTTCCATTTCCTTATAGTACTTaGGAGCAGCCCCATCAAAATCAGGCTCATCAGTCA | + |
Preference number: 6 (lower is better) Translates to: STLACLPFPYST*EQPHQNQAHQS Trigger: TGACTGATGAGCCTGATTTTGATGGGGCTGCTCTCAAGTACTATAAGGAAATGGAAGACAGGCAAGAGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |
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CDS CAA 72 bp | TTTAGCAATCTGGTAGGTAATGGCTCTCTTTGCATTTaGTTCTTCGAGAGCCTGTTCTTCAGCACTGTTTTC | + |
Preference number: 6 (lower is better) Translates to: FSNLVGNGSLCI*FFESLFFSTVF Trigger: GAAAACAGTGCTGAAGAACAGGCTCTCGAAGAACAAAATGCAAAGAGAGCCATTACCTACCAGATTGCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090413.6 |