RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UTP3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070697

Ensembl transcript IDs: ENSMUST00000090413.6

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GAGAGGGCGGCAACCCCAAGTCGTCCTCATTTTCGTCCGTGGCGGTaGGACCTGCCTGGGCCCGCACGGCGGCCCACTGAGCCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: ERAATPSRPHFRPWR*DLPGPARRPTEPLH
Trigger: GTGGAGCGGCTCAGTGGGCCGCCGTGCGGGCCCAGGCAGGTCTCACCGCCACGGACGAAAATGAGGACGACTTGGGGTTGCCGCCCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CCA 90 bp CCTCATCGCCATCCTCCTCCCCACTCTCGACTTCGTTCCAGCCCTTaGCCAGGACTGCCCGAGATCGCGCTTCATGGAACTCATCTACCT +
Preference number: 5 (lower is better)
Translates to: PHRHPPPHSRLRSSP*PGLPEIALHGTHLP
Trigger: AGGTAGATGAGTTCCATGAAGCGCGATCTCGGGCAGTCCTGGCCAAGGGCTGGAACGAAGTCGAGAGTGGGGAGGAGGATGGCGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS GCA 90 bp ATCCTCCTCCCCACTCTCGACTTCGTTCCAGCCCTTGGCCAGGACTaGCCGAGATCGCGCTTCATGGAACTCATCTACCTGGTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: ILLPTLDFVPALGQD*PRSRFMELIYLVLV
Trigger: TACCAAGACCAGGTAGATGAGTTCCATGAAGCGCGATCTCGGGCAGTCCTGGCCAAGGGCTGGAACGAAGTCGAGAGTGGGGAGGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS GCA 90 bp CTTCACAACCCTTGTCTCAGCTTCGTCTACCTGGGGCACCGGCTTTaGAAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LHNPCLSFVYLGHRL*KGLHPSDSKIILLQ
Trigger: CTGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCGGTGCCCCAGGTAGACGAAGCTGAGACAAGGGTTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CCA 90 bp GAGATCGCGCTTCATGGAACTCATCTACCTGGTCTTGGTAGTAGCTaGAGTCCCCTGGAGAGGGCGGCAACCCCAAGTCGTCCTCATTTT +
Preference number: 5 (lower is better)
Translates to: EIALHGTHLPGLGSS*SPLERAATPSRPHF
Trigger: AAAATGAGGACGACTTGGGGTTGCCGCCCTCTCCAGGGGACTCCAGCTACTACCAAGACCAGGTAGATGAGTTCCATGAAGCGCGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS GCA 90 bp CAGCACGAATGCCAGAGAGTTCACCACTGTACCGCTGTTCTTCTCTaGGAACTTCACGAACCTGGCCTCGTCGTCGGATTTTGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: QHECQRVHHCTAVLL*ELHEPGLVVGFWLF
Trigger: GAAAAGCCAAAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAGAGAAGAACAGCGGTACAGTGGTGAACTCTCTGGCATTCGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS GCA 90 bp ATCATCCTCTTGCAGGGCTTGGGCCAAGCGCCGCTGAATTATCTGTaGCTCCTCCTCTTCTTCTCTTTCCTCCTCTTCTACTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: IILLQGLGQAPLNYL*LLLFFSFLLFYFLL
Trigger: CAGCAAGAAGTAGAAGAGGAGGAAAGAGAAGAAGAGGAGGAGGCACAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CCA 90 bp TGTAACAAGGGTTCTAACTCATCCTTCACCTCTGTCAACTTGGCTTaGAGGTCTTCTATGAGCTCTAAGAGCTCTGGTGATTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: CNKGSNSSFTSVNLA*RSSMSSKSSGDSFF
Trigger: GAAGAAAGAATCACCAGAGCTCTTAGAGCTCATAGAAGACCTCCAAGCCAAGTTGACAGAGGTGAAGGATGAGTTAGAACCCTTGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS TCA 90 bp CTAACTCATCCTTCACCTCTGTCAACTTGGCTTGGAGGTCTTCTATaGGCTCTAAGAGCTCTGGTGATTCTTTCTTCAACATTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: LTHPSPLSTWLGGLL*ALRALVILSSTFSA
Trigger: AGCTGAAAATGTTGAAGAAAGAATCACCAGAGCTCTTAGAGCTCATAGAAGACCTCCAAGCCAAGTTGACAGAGGTGAAGGATGAGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS TCA 72 bp GCAACCCCAAGTCGTCCTCATTTTCGTCCGTGGCGGTaGGACCTGCCTGGGCCCGCACGGCGGCCCACTGAG +
Preference number: 6 (lower is better)
Translates to: ATPSRPHFRPWR*DLPGPARRPTE
Trigger: CTCAGTGGGCCGCCGTGCGGGCCCAGGCAGGTCTCACCGCCACGGACGAAAATGAGGACGACTTGGGGTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS GCA 72 bp GACAAGCTAGGGTCCACAGAGGCCTCAGCCTCACTCTaGACGGAGCTTCCGCCGTCATCATCCTCTCCAACC +
Preference number: 6 (lower is better)
Translates to: DKLGSTEASASL*TELPPSSSSPT
Trigger: GGTTGGAGAGGATGATGACGGCGGAAGCTCCGTGCAGAGTGAGGCTGAGGCCTCTGTGGACCCTAGCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CCA 72 bp CATCCTCCTCCCCACTCTCGACTTCGTTCCAGCCCTTaGCCAGGACTGCCCGAGATCGCGCTTCATGGAACT +
Preference number: 6 (lower is better)
Translates to: HPPPHSRLRSSP*PGLPEIALHGT
Trigger: AGTTCCATGAAGCGCGATCTCGGGCAGTCCTGGCCAAGGGCTGGAACGAAGTCGAGAGTGGGGAGGAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 90 bp CAGGACTGCCCGAGATCGCGCTTCATGGAACTCATCTACCTGGTCTaGGTAGTAGCTGGAGTCCCCTGGAGAGGGCGGCAACCCCAAGTC +
Preference number: 6 (lower is better)
Translates to: QDCPRSRFMELIYLV*VVAGVPWRGRQPQV
Trigger: GACTTGGGGTTGCCGCCCTCTCCAGGGGACTCCAGCTACTACCAAGACCAGGTAGATGAGTTCCATGAAGCGCGATCTCGGGCAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS GCA 72 bp CCCACTCTCGACTTCGTTCCAGCCCTTGGCCAGGACTaGCCGAGATCGCGCTTCATGGAACTCATCTACCTG +
Preference number: 6 (lower is better)
Translates to: PTLDFVPALGQD*PRSRFMELIYL
Trigger: CAGGTAGATGAGTTCCATGAAGCGCGATCTCGGGCAGTCCTGGCCAAGGGCTGGAACGAAGTCGAGAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 90 bp CGGCTTTGCAAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTaGCAGGGCTTGGGCCAAGCGCCGCTGAATTATCTGTGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RLCKGLHPSDSKIIL*QGLGQAPLNYLCLL
Trigger: GAGGAGGCACAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS GCA 72 bp CCTTGTCTCAGCTTCGTCTACCTGGGGCACCGGCTTTaGAAAGGCCTCCACCCAAGCGACTCCAAAATCATC +
Preference number: 6 (lower is better)
Translates to: PCLSFVYLGHRL*KGLHPSDSKII
Trigger: GATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCGGTGCCCCAGGTAGACGAAGCTGAGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CCA 72 bp CTTCATGGAACTCATCTACCTGGTCTTGGTAGTAGCTaGAGTCCCCTGGAGAGGGCGGCAACCCCAAGTCGT +
Preference number: 6 (lower is better)
Translates to: LHGTHLPGLGSS*SPLERAATPSR
Trigger: ACGACTTGGGGTTGCCGCCCTCTCCAGGGGACTCCAGCTACTACCAAGACCAGGTAGATGAGTTCCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 72 bp CACCCAAGCGACTCCAAAATCATCCTCTTGCAGGGCTaGGGCCAAGCGCCGCTGAATTATCTGTGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: HPSDSKIILLQG*GQAPLNYLCLL
Trigger: GAGGAGGCACAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGATTTTGGAGTCGCTTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 72 bp CCCTTGTCTCAGCTTCGTCTACCTGGGGCACCGGCTTaGCAAAGGCCTCCACCCAAGCGACTCCAAAATCAT +
Preference number: 6 (lower is better)
Translates to: PLSQLRLPGAPA*QRPPPKRLQNH
Trigger: ATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCGGTGCCCCAGGTAGACGAAGCTGAGACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 90 bp AAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTTGCAGGGCTaGGGCCAAGCGCCGCTGAATTATCTGTGCCTCCTCCTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: KGLHPSDSKIILLQG*GQAPLNYLCLLLFF
Trigger: GAAGAAGAGGAGGAGGCACAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 90 bp CCTTCACAACCCTTGTCTCAGCTTCGTCTACCTGGGGCACCGGCTTaGCAAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTTGCA +
Preference number: 6 (lower is better)
Translates to: PSQPLSQLRLPGAPA*QRPPPKRLQNHPLA
Trigger: TGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTTGCAAAGCCGGTGCCCCAGGTAGACGAAGCTGAGACAAGGGTTGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 72 bp AAAGGCCTCCACCCAAGCGACTCCAAAATCATCCTCTaGCAGGGCTTGGGCCAAGCGCCGCTGAATTATCTG +
Preference number: 6 (lower is better)
Translates to: KGLHPSDSKIIL*QGLGQAPLNYL
Trigger: CAGATAATTCAGCGGCGCTTGGCCCAAGCCCTGCAAGAGGATGATTTTGGAGTCGCTTGGGTGGAGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS GCA 72 bp TGCCAGAGAGTTCACCACTGTACCGCTGTTCTTCTCTaGGAACTTCACGAACCTGGCCTCGTCGTCGGATTT +
Preference number: 6 (lower is better)
Translates to: CQRVHHCTAVLL*ELHEPGLVVGF
Trigger: AAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAGAGAAGAACAGCGGTACAGTGGTGAACTCTCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 90 bp TATCTGTGCCTCCTCCTCTTCTTCTCTTTCCTCCTCTTCTACTTCTaGCTGACTCTGACGGCCTCGGGATTTGGAACCATAGTCCGTATC +
Preference number: 6 (lower is better)
Translates to: YLCLLLFFSFLLFYF*LTLTASGFGTIVRI
Trigger: GATACGGACTATGGTTCCAAATCCCGAGGCCGTCAGAGTCAGCAAGAAGTAGAAGAGGAGGAAAGAGAAGAAGAGGAGGAGGCACAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CCA 72 bp CTGTACCGCTGTTCTTCTCTGCGAACTTCACGAACCTaGCCTCGTCGTCGGATTTTGGCTTTTCTGAACTTT +
Preference number: 6 (lower is better)
Translates to: LYRCSSLRTSRT*PRRRILAFLNF
Trigger: AAAGTTCAGAAAAGCCAAAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAGAGAAGAACAGCGGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 72 bp CTGCGAACTTCACGAACCTGGCCTCGTCGTCGGATTTaGGCTTTTCTGAACTTTTCCCTATGTTTCACTCTG +
Preference number: 6 (lower is better)
Translates to: LRTSRTWPRRRI*AFLNFSLCFTL
Trigger: CAGAGTGAAACATAGGGAAAAGTTCAGAAAAGCCAAAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 90 bp ACCAACTGTAACAAGGGTTCTAACTCATCCTTCACCTCTGTCAACTaGGCTTGGAGGTCTTCTATGAGCTCTAAGAGCTCTGGTGATTCT +
Preference number: 6 (lower is better)
Translates to: TNCNKGSNSSFTSVN*AWRSSMSSKSSGDS
Trigger: AGAATCACCAGAGCTCTTAGAGCTCATAGAAGACCTCCAAGCCAAGTTGACAGAGGTGAAGGATGAGTTAGAACCCTTGTTACAGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 90 bp TGTTCTTCTCTGCGAACTTCACGAACCTGGCCTCGTCGTCGGATTTaGGCTTTTCTGAACTTTTCCCTATGTTTCACTCTGGGATTTCTA +
Preference number: 6 (lower is better)
Translates to: CSSLRTSRTWPRRRI*AFLNFSLCFTLGFL
Trigger: TAGAAATCCCAGAGTGAAACATAGGGAAAAGTTCAGAAAAGCCAAAATCCGACGACGAGGCCAGGTTCGTGAAGTTCGCAGAGAAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS TCA 72 bp TCAACTCTTGCCTGTCTTCCATTTCCTTATAGTACTTaGGAGCAGCCCCATCAAAATCAGGCTCATCAGTCA +
Preference number: 6 (lower is better)
Translates to: STLACLPFPYST*EQPHQNQAHQS
Trigger: TGACTGATGAGCCTGATTTTGATGGGGCTGCTCTCAAGTACTATAAGGAAATGGAAGACAGGCAAGAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6
CDS CAA 72 bp TTTAGCAATCTGGTAGGTAATGGCTCTCTTTGCATTTaGTTCTTCGAGAGCCTGTTCTTCAGCACTGTTTTC +
Preference number: 6 (lower is better)
Translates to: FSNLVGNGSLCI*FFESLFFSTVF
Trigger: GAAAACAGTGCTGAAGAACAGGCTCTCGAAGAACAAAATGCAAAGAGAGCCATTACCTACCAGATTGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090413.6