RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UTP25 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000016181

Ensembl transcript IDs: ENSMUST00000085555.7, ENSMUST00000195291.6, ENSMUST00000195848.2

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGCTCCACACCAACCACAGCCGCCAGCCTCTGGGCATCATACTTaGAATACAGCACGGTGCACGTCCACGTGGCCTCCTCTCCTCTGC +
Preference number: 1 (lower is better)
Translates to: PAPHQPQPPASGHHT*NTARCTSTWPPLLC
Trigger: GCAGAGGAGAGGAGGCCACGTGGACGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGGCGGCTGTGGTTGGTGTGGAGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR CCA 90 bp AGCATCTGTGCCGCCCGCTCCACACCAACCACAGCCGCCAGCCTCTaGGCATCATACTTGGAATACAGCACGGTGCACGTCCACGTGGCC +
Preference number: 1 (lower is better)
Translates to: SICAARSTPTTAASL*ASYLEYSTVHVHVA
Trigger: GGCCACGTGGACGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGGCGGCTGTGGTTGGTGTGGAGCGGGCGGCACAGATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR GCA 90 bp CCACAGCCGCCAGCCTCTGGGCATCATACTTGGAATACAGCACGGTaGACGTCCACGTGGCCTCCTCTCCTCTGCTGGTGGCTCTCAGCA +
Preference number: 1 (lower is better)
Translates to: PQPPASGHHTWNTAR*TSTWPPLLCWWLSA
Trigger: TGCTGAGAGCCACCAGCAGAGGAGAGGAGGCCACGTGGACGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGGCGGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR GCA 90 bp TCCGGTGACGAAGAGGTGGACATTCTTTGGAGACTGCAGCATCTGTaGCGCCCGCTCCACACCAACCACAGCCGCCAGCCTCTGGGCATC +
Preference number: 1 (lower is better)
Translates to: SGDEEVDILWRLQHL*RPLHTNHSRQPLGI
Trigger: GATGCCCAGAGGCTGGCGGCTGTGGTTGGTGTGGAGCGGGCGGCACAGATGCTGCAGTCTCCAAAGAATGTCCACCTCTTCGTCACCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR GCA 90 bp AAACCCTGTCTCAGACAGGCAGTCGGTCAGGAGACAGCGACGCAATaGAAGCCAAGTGGCCTAACGGGGCCCAGTGAGGTCACAGCCCCA +
Preference number: 1 (lower is better)
Translates to: KPCLRQAVGQETATQ*KPSGLTGPSEVTAP
Trigger: TGGGGCTGTGACCTCACTGGGCCCCGTTAGGCCACTTGGCTTGCATTGCGTCGCTGTCTCCTGACCGACTGCCTGTCTGAGACAGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR TCA 90 bp GCTATGGTGCCCAAATGGCCACAGCCCAATGCAGAGGTCCAAGACTaGCAATCACGATGGCTTGGTCAGGCCACCCCTGACCTGTTGGCC +
Preference number: 1 (lower is better)
Translates to: AMVPKWPQPNAEVQD*QSRWLGQATPDLLA
Trigger: GGCCAACAGGTCAGGGGTGGCCTGACCAAGCCATCGTGATTGTCAGTCTTGGACCTCTGCATTGGGCTGTGGCCATTTGGGCACCATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 90 bp CCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATaGAGAGGTCCAAGACTGACAATCACGATGGCTTGGTCAGGCCAC +
Preference number: 1 (lower is better)
Translates to: PHASRGYGAQMATAQ*RGPRLTITMAWSGH
Trigger: GTGGCCTGACCAAGCCATCGTGATTGTCAGTCTTGGACCTCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 90 bp ACTCATTTTTCTCCGGTGACGAAGAGGTGGACATTCTTTGGAGACTaGAGCATCTGTGCCGCCCGCTCCACACCAACCACAGCCGCCAGC +
Preference number: 1 (lower is better)
Translates to: THFSPVTKRWTFFGD*SICAARSTPTTAAS
Trigger: GCTGGCGGCTGTGGTTGGTGTGGAGCGGGCGGCACAGATGCTGCAGTCTCCAAAGAATGTCCACCTCTTCGTCACCGGAGAAAAATGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR TCA 90 bp AGTGACACAGGACTGCAGACTGCCTGGAGCCCGTTCCTGGGGCAGTaGACAGATCAGGTCTATGAGGTCCAACAATGTAGTCCGTTCCCC +
Preference number: 1 (lower is better)
Translates to: SDTGLQTAWSPFLGQ*TDQVYEVQQCSPFP
Trigger: GGGGAACGGACTACATTGTTGGACCTCATAGACCTGATCTGTTCACTGCCCCAGGAACGGGCTCCAGGCAGTCTGCAGTCCTGTGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR TCA 90 bp AAGTGTGGCAAGCACAAGCGTCAGTTTCTGAGAGTAGCAGGCCTCTaGCTGCTCTTGGCCCTGACAGCTGTGGTGACCCACACTGGTCAC +
Preference number: 1 (lower is better)
Translates to: KCGKHKRQFLRVAGL*LLLALTAVVTHTGH
Trigger: GTGACCAGTGTGGGTCACCACAGCTGTCAGGGCCAAGAGCAGTCAGAGGCCTGCTACTCTCAGAAACTGACGCTTGTGCTTGCCACACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 90 bp AATACAGCACGGTGCACGTCCACGTGGCCTCCTCTCCTCTGCTGGTaGCTCTCAGCATGTTACAGACCTCACTGTAGAAGTGAGGGTACG +
Preference number: 1 (lower is better)
Translates to: NTARCTSTWPPLLCW*LSACYRPHCRSEGT
Trigger: CGTACCCTCACTTCTACAGTGAGGTCTGTAACATGCTGAGAGCCACCAGCAGAGGAGAGGAGGCCACGTGGACGTGCACCGTGCTGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR CCA 90 bp CCTCCACACTCATTTTTCTCCGGTGACGAAGAGGTGGACATTCTTTaGAGACTGCAGCATCTGTGCCGCCCGCTCCACACCAACCACAGC +
Preference number: 1 (lower is better)
Translates to: PPHSFFSGDEEVDIL*RLQHLCRPLHTNHS
Trigger: GCTGTGGTTGGTGTGGAGCGGGCGGCACAGATGCTGCAGTCTCCAAAGAATGTCCACCTCTTCGTCACCGGAGAAAAATGAGTGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR TCA 90 bp GGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAATaGGCAGCCTGCCTTCCCGCCACATGCCAGCCGAGGCTATGGTGC +
Preference number: 1 (lower is better)
Translates to: GSQNNCLGEKEAHWK*AACLPATCQPRLWC
Trigger: GCACCATAGCCTCGGCTGGCATGTGGCGGGAAGGCAGGCTGCTCATTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 90 bp ACTTGGAATACAGCACGGTGCACGTCCACGTGGCCTCCTCTCCTCTaGTGGTGGCTCTCAGCATGTTACAGACCTCACTGTAGAAGTGAG +
Preference number: 1 (lower is better)
Translates to: TWNTARCTSTWPPLL*WWLSACYRPHCRSE
Trigger: CTCACTTCTACAGTGAGGTCTGTAACATGCTGAGAGCCACCAGCAGAGGAGAGGAGGCCACGTGGACGTGCACCGTGCTGTATTCCAAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR GCA 90 bp GTGGGGGAAAGGGAAGGAAGGCTGAAGGCCTCAGATCATAGAGGATaGACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGGAAGCC +
Preference number: 1 (lower is better)
Translates to: VGEREGRLKASDHRG*TLNSMASTAFFMEA
Trigger: GGCTTCCATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATGATCTGAGGCCTTCAGCCTTCCTTCCCTTTCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 90 bp GACTGGGACATAGCCCGGGACACCTCCTGCTCTCAGCCAGGCCCATaGGCAATAACAGCAAATGCTTTAAGAAAAATAGACAGGCAAGTC +
Preference number: 1 (lower is better)
Translates to: DWDIARDTSCSQPGP*AITANALRKIDRQV
Trigger: GACTTGCCTGTCTATTTTTCTTAAAGCATTTGCTGTTATTGCCCATGGGCCTGGCTGAGAGCAGGAGGTGTCCCGGGCTATGTCCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR TCA 90 bp CTTCAAGCCCGTGTTTCCAGCACTCCAAGAGCAGGGAGACTGCCATaGGTTCCAGGCCAGCCTGTGGTGAACACTCTTATCTTTAAAAAC +
Preference number: 1 (lower is better)
Translates to: LQARVSSTPRAGRLP*VPGQPVVNTLIFKN
Trigger: GTTTTTAAAGATAAGAGTGTTCACCACAGGCTGGCCTGGAACTCATGGCAGTCTCCCTGCTCTTGGAGTGCTGGAAACACGGGCTTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 90 bp AGTGCCTCCCTATCTAAGACTGGGATCACTCCACACACTGTGGGCTaGAAAGGAGATACTGAGAACTACCAACATAGAAGTTGGGAGAGG +
Preference number: 1 (lower is better)
Translates to: SASLSKTGITPHTVG*KGDTENYQHRSWER
Trigger: CCTCTCCCAACTTCTATGTTGGTAGTTCTCAGTATCTCCTTTGCAGCCCACAGTGTGTGGAGTGATCCCAGTCTTAGATAGGGAGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 90 bp CACATAACTCTTCAGAAAGTCTTGAAGGAAGTCAGAATAATTGCCTaGGAGAAAAAGAGGCTCACTGGAAATGAGCAGCCTGCCTTCCCG +
Preference number: 1 (lower is better)
Translates to: HITLQKVLKEVRIIA*EKKRLTGNEQPAFP
Trigger: CGGGAAGGCAGGCTGCTCATTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACTTTCTGAAGAGTTATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 90 bp GGCTCTCAGCATGTTACAGACCTCACTGTAGAAGTGAGGGTACGTTaGCAGTTCATAGAATATCAGGTTCCTGATGCCTTTTATTGTGTA +
Preference number: 1 (lower is better)
Translates to: GSQHVTDLTVEVRVR*QFIEYQVPDAFYCV
Trigger: TACACAATAAAAGGCATCAGGAACCTGATATTCTATGAACTGCCAACGTACCCTCACTTCTACAGTGAGGTCTGTAACATGCTGAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR CCA 90 bp AAAACCAACTTGGTGCTGAGGACAGAATCAACCTTGGGTCCCAAATaGTGTTACTTGAACTGTAGAAATAAATGCTGCTTTATACATGAC +
Preference number: 1 (lower is better)
Translates to: KTNLVLRTESTLGPK*CYLNCRNKCCFIHD
Trigger: GTCATGTATAAAGCAGCATTTATTTCTACAGTTCAAGTAACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 90 bp GCCCGCTCCACACCAACCACAGCCGCCAGCCTCTGGGCATCATACTaGGAATACAGCACGGTGCACGTCCACGTGGCCTCCTCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: ARSTPTTAASLWASY*EYSTVHVHVASSPL
Trigger: CAGAGGAGAGGAGGCCACGTGGACGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGGCGGCTGTGGTTGGTGTGGAGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp TTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGGGCACTGCACGTGTaGTGGGAGCCTACAGTCCTG +
Preference number: 2 (lower is better)
Translates to: FPPHASRGYGAQMATAQCRALHV*WEPTVL
Trigger: CAGGACTGTAGGCTCCCATCACACGTGCAGTGCCCT...GCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp GAGCAGCCTGCCTTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACATTCTTTGGAGACTaGAGCATCTGTGCCGCCCGC +
Preference number: 2 (lower is better)
Translates to: EQPAFPPHASRGYGAQMATFFGD*SICAAR
Trigger: GCGGGCGGCACAGATGCTGCAGTCTCCAAAGAATGT...GGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAAGGCAGGCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp GAGCAGCCTGCCTTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCCCTCCTCTCCTCTGCTaGTGGCTCTCAGCATGTTAC +
Preference number: 2 (lower is better)
Translates to: EQPAFPPHASRGYGAQMAPPLLC*WLSACY
Trigger: GTAACATGCTGAGAGCCACCAGCAGAGGAGAGGAGG...GGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAAGGCAGGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp GCACGTGTGATGGGAGCCTACAGTCCTGCCCGTGTCCTCTCACTGTCTAGACCACAACTCTGCAGCAGCTaGGGCTCAGGCCTGCACCTT +
Preference number: 2 (lower is better)
Translates to: ARVMGAYSPARVLSLSRPQLCSS*GSGLHL
Trigger: AAGGTGCAGGCCTGAGCCTCAGCTGCTGCAGAGTTG...TGGTCTAGACAGTGAGAGGACACGGGCAGGACTGTAGGCTCCCATCACACGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp CCTGGGAGAAAAAGAGGCTCACTGGAAATGAGCAGCCTGCCTTCCCGCCACATGGCAGCCAGACTTCCCTaGCTCTCCCTTGCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: PGRKRGSLEMSSLPSRHMAARLP*LSLALS
Trigger: GCTGAGGGCAAGGGAGAGTCAGGGAAGTCTGGCTGC...CATGTGGCGGGAAGGCAGGCTGCTCATTTCCAGTGAGCCTCTTTTTCTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp AGTGGCCTAACGGGGCCCAGTGAGGTCACAGCCCCACCTAAGGAACATCTGACAAGACTGCAGCATCTGTaGCGCCCGCTCCACACCAAC +
Preference number: 2 (lower is better)
Translates to: SGLTGPSEVTAPPKEHLTRLQHL*RPLHTN
Trigger: GTTGGTGTGGAGCGGGCGGCACAGATGCTGCAGTCT...TGTCAGATGTTCCTTAGGTGGGGCTGTGACCTCACTGGGCCCCGTTAGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGAGCTATGGTGCCCAAATaGCCACAGCCCAATGCAGAG +
Preference number: 2 (lower is better)
Translates to: PPHASRGYGAQMATAQCRAMVPK*PQPNAE
Trigger: CTCTGCATTGGGCTGTGGCCATTTGGGCACCATAGC...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 90 bp CCCGTGTCCTCTCACTGTCTAGACCAAAGCCAAACACCCGTGAGGTaGGCAGTCAACTCTGCAGCAGCTGAGGCTCAGGCCTGCACCTTC +
Preference number: 2 (lower is better)
Translates to: PVSSHCLDQSQTPVR*AVNSAAAEAQACTF
Trigger: GAAGGTGCAGGCCTGAGCCTCAGCTGCTGCAGAGTTGACTGCCAACCTCACGGGTGTTTGGCTTTGGTCTAGACAGTGAGAGGACACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp CTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCCGCAGCCAGACTTCCCTaGCTCTCCCTTGCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: LPTSPGSDLCRTMLAFRAAARLP*LSLALS
Trigger: GCTGAGGGCAAGGGAGAGTCAGGGAAGTCTGGCTGC...GGCTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp GCACGTGTGATGGGAGCCTACAGTCCTGCCCGTGTCCTCTCACTGTCTAGACCATGGCCTCCTCTCCTCTaGTGGTGGCTCTCAGCATGT +
Preference number: 2 (lower is better)
Translates to: ARVMGAYSPARVLSLSRPWPPLL*WWLSAC
Trigger: ACATGCTGAGAGCCACCAGCAGAGGAGAGGAGGCCA...TGGTCTAGACAGTGAGAGGACACGGGCAGGACTGTAGGCTCCCATCACACGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp ACTATGCAGACCAATCGCTTTCTAGTCAGGATCCTCCTGCCCCCAGGCACCATGCCAGTGACACAGGACTaGAGACTGCCTGGAGCCCGT +
Preference number: 2 (lower is better)
Translates to: TMQTNRFLVRILLPPGTMPVTQD*RLPGAR
Trigger: ACGGGCTCCAGGCAGTCTGCAGTCCTGTGTCACTGG...CATGGTGCCTGGGGGCAGGAGGATCCTGACTAGAAAGCGATTGGTCTGCATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp CCTGGGAGAAAAAGAGGCTCACTGGAAATGAGCAGCCTGCCTTCCCGCCACATGGCTGAGGCTCAGGCCTaGACCTTCCTGTCGTCTGAA +
Preference number: 2 (lower is better)
Translates to: PGRKRGSLEMSSLPSRHMAEAQA*TFLSSE
Trigger: TTCAGACGACAGGAAGGTGCAGGCCTGAGCCTCAGC...CATGTGGCGGGAAGGCAGGCTGCTCATTTCCAGTGAGCCTCTTTTTCTCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp TTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCGGTCAAGGTCAGAAATaGAAGGGCGGGTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: FPPHASRGYGAQMATAQCGQGQK*KGGLKT
Trigger: TGTCTTCAACCCGCCCTTCCATTTCTGACCTTGACC...GCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGATCTGGGCATCATACTTaGAATACAGCACGGTGCACG +
Preference number: 2 (lower is better)
Translates to: PPHASRGYGAQMATAQCRSGHHT*NTARCT
Trigger: CGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGA...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp CCTGGGAGAAAAAGAGGCTCACTGGAAATGAGCAGCCTGCCTTCCCGCCACATGGAAGCTGCCTTCTGTTaGGTTGAAGCGAGGGTCACC +
Preference number: 2 (lower is better)
Translates to: PGRKRGSLEMSSLPSRHMEAAFC*VEARVT
Trigger: GGTGACCCTCGCTTCAACTCAACAGAAGGCAGCTTC...CATGTGGCGGGAAGGCAGGCTGCTCATTTCCAGTGAGCCTCTTTTTCTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 90 bp CCAGAAAGGTCCAGCAAAAGGCAGCCAGACTTCCCTGACTCTCCCTaGCCCTCAGCATCTTCTTGTCCCCCACAAAGGGTGCAATTAGGG +
Preference number: 2 (lower is better)
Translates to: PERSSKRQPDFPDSP*PSASSCPPQRVQLG
Trigger: CCCTAATTGCACCCTTTGTGGGGGACAAGAAGATGCTGAGGGCAAGGGAGAGTCAGGGAAGTCTGGCTGCCTTTTGCTGGACCTTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp CTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCCCACTGCACTTTCCAGTaGCACAGGACTGCAGACTGC +
Preference number: 2 (lower is better)
Translates to: LPTSPGSDLCRTMLAFRAHCTFQ*HRTADC
Trigger: GCAGTCTGCAGTCCTGTGTCACTGGAAAGTGCAGTG...GGCTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp CAAGGTCAGAAATGGAAGGGCGGGTTGAAGACAGGACCAGGAATACAGAGCTGTCCAGTGACACAGGACTaGAGACTGCCTGGAGCCCGT +
Preference number: 2 (lower is better)
Translates to: QGQKWKGGLKTGPGIQSCPVTQD*RLPGAR
Trigger: ACGGGCTCCAGGCAGTCTGCAGTCCTGTGTCACTGG...ACAGCTCTGTATTCCTGGTCCTGTCTTCAACCCGCCCTTCCATTTCTGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGGCTGAGGCTCAGGCCTaGACCTTCCTGTCGTCTGAA +
Preference number: 2 (lower is better)
Translates to: SCPPAQVQISVEQCWHSEAEAQA*TFLSSE
Trigger: TTCAGACGACAGGAAGGTGCAGGCCTGAGCCTCAGC...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp GGCACTGCACGTGTGATGGGAGCCTACAGTCCTGCCCGTGTCCTCTCACTGTCTGAGATCCCAGACTTCTaGGTATACTCGCAGATGTGT +
Preference number: 2 (lower is better)
Translates to: GTARVMGAYSPARVLSLSEIPDF*VYSQMC
Trigger: ACACATCTGCGAGTATACGCAGAAGTCTGGGATCTC...AGACAGTGAGAGGACACGGGCAGGACTGTAGGCTCCCATCACACGTGCAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp GCTGGTGGCTCTCAGCATGTTACAGACCTCACTGTAGAAGTGAGGGTACGTTGGCCGTTCCTGGGGCAGTaGACAGATCAGGTCTATGAG +
Preference number: 2 (lower is better)
Translates to: AGGSQHVTDLTVEVRVRWPFLGQ*TDQVYE
Trigger: CTCATAGACCTGATCTGTTCACTGCCCCAGGAACGG...CCAACGTACCCTCACTTCTACAGTGAGGTCTGTAACATGCTGAGAGCCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp GCTGGTGGCTCTCAGCATGTTACAGACCTCACTGTAGAAGTGAGGGTACGTTGGCACTGCACTTTCCAGTaGCACAGGACTGCAGACTGC +
Preference number: 2 (lower is better)
Translates to: AGGSQHVTDLTVEVRVRWHCTFQ*HRTADC
Trigger: GCAGTCTGCAGTCCTGTGTCACTGGAAAGTGCAGTG...CCAACGTACCCTCACTTCTACAGTGAGGTCTGTAACATGCTGAGAGCCACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp AGTCAAACCCTGTCTCAGACAGGCAGTCGGTCAGGAGACAGCGACGCAATGCAACACCTTCCTGTCGTCTaGAGCTGCCTTCTGTTGAGT +
Preference number: 2 (lower is better)
Translates to: SQTLSQTGSRSGDSDAMQHLPVV*SCLLLS
Trigger: ACTCAACAGAAGGCAGCTTCAGACGACAGGAAGGTG...TTGCATTGCGTCGCTGTCTCCTGACCGACTGCCTGTCTGAGACAGGGTTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp ACTATGCAGACCAATCGCTTTCTAGTCAGGATCCTCCTGCCCCCAGGCACCATGCACCTAAGGAACATCTaGCAGACTTCCTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: TMQTNRFLVRILLPPGTMHLRNI*QTSWPQ
Trigger: CTGAGGCCAGGAAGTCTGTCAGATGTTCCTTAGGTG...CATGGTGCCTGGGGGCAGGAGGATCCTGACTAGAAAGCGATTGGTCTGCATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp ACTATGCAGACCAATCGCTTTCTAGTCAGGATCCTCCTGCCCCCAGGCACCATGTGGTGTAGCCAGCTGTaGCAGCTGTCTCGAGTCAAT +
Preference number: 2 (lower is better)
Translates to: TMQTNRFLVRILLPPGTMWCSQL*QLSRVN
Trigger: ATTGACTCGAGACAGCTGTCACAGCTGGCTACACCA...CATGGTGCCTGGGGGCAGGAGGATCCTGACTAGAAAGCGATTGGTCTGCATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp CTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCCTACCAACATAGAAGTTaGGAGAGGGGATGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: LPTSPGSDLCRTMLAFRAYQHRS*ERGCGR
Trigger: CCTCCCGCATCCCCTCTCCCAACTTCTATGTTGGTA...GGCTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGAGAAGTGTCGAGCCCTaGAGATCCCAGACTTCTGCG +
Preference number: 2 (lower is better)
Translates to: SCPPAQVQISVEQCWHSERSVEP*RSQTSA
Trigger: CGCAGAAGTCTGGGATCTCCAGGGCTCGACACTTCT...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTACCGTTCCTGGGGCAGTaGACAGATCAGGTCTATGAG +
Preference number: 2 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLPFLGQ*TDQVYE
Trigger: CTCATAGACCTGATCTGTTCACTGCCCCAGGAACGG...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp CCCCAGGCCTTTTGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTAGAGTAGCAGGCCTCTaGCTGCTCTTGGCCCTGACA +
Preference number: 2 (lower is better)
Translates to: PQAFCHLETIGSTNLNLARVAGL*LLLALT
Trigger: TGTCAGGGCCAAGAGCAGTCAGAGGCCTGCTACTCT...AGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp CTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCCCCACTGTGCAGAGTCTaGAAGTCTCACTTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: LPTSPGSDLCRTMLAFRAPLCRV*KSHFLG
Trigger: ACCCAGAAAGTGAGACTTTCAGACTCTGCACAGTGG...GGCTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp CGCTGTGATTATCTTGTTATATCGAACACTGTACATGGTGTAGCCAGCTGTGACGGACTGCAGACTGCCTaGAGCCCGTTCCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: RCDYLVISNTVHGVASCDGLQTA*SPFLGQ
Trigger: CTGCCCCAGGAACGGGCTCCAGGCAGTCTGCAGTCC...GTCACAGCTGGCTACACCATGTACAGTGTTCGATATAACAAGATAATCACAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp TCAGATCATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGGGACTGCAGACTGCCTaGAGCCCGTTCCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: SDHRGCTLNSMASTAFFMGLQTA*SPFLGQ
Trigger: CTGCCCCAGGAACGGGCTCCAGGCAGTCTGCAGTCC...CATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATGATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp AGTCAAACCCTGTCTCAGACAGGCAGTCGGTCAGGAGACAGCGACGCAATGCAACTCATTTTTCTCCGGTaGCGAAGAGGTGGACATTCT +
Preference number: 2 (lower is better)
Translates to: SQTLSQTGSRSGDSDAMQLIFLR*RRGGHS
Trigger: AGAATGTCCACCTCTTCGTCACCGGAGAAAAATGAG...TTGCATTGCGTCGCTGTCTCCTGACCGACTGCCTGTCTGAGACAGGGTTTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTACTGGTCACTCTGCACTaGACACTGCACTTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLLVTLH*TLHFPV
Trigger: CACTGGAAAGTGCAGTGTGCAGTGCAGAGTGACCAG...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 90 bp CAGGCGGGTGTAGAGAACTTCCCCTGCTTTCTTTCCCCAGGCCTTTaGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: QAGVENFPCFLSPGL*SSGDHRLNKSKPGC
Trigger: ACAGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGGAAAGAAAGCAGGGGAAGTTCTCTACACCCGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGAAACCAACTTGGTGCTaGGGACAGAATCAACCTTGG +
Preference number: 2 (lower is better)
Translates to: SCPPAQVQISVEQCWHSEKPTWC*GQNQPW
Trigger: CCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTT...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp ACTATGCAGACCAATCGCTTTCTAGTCAGGATCCTCCTGCCCCCAGGCACCATGCAGGCCAGCCTGTGGTaGACACTCTTATCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: TMQTNRFLVRILLPPGTMQASLW*TLLSLK
Trigger: TTTTAAAGATAAGAGTGTTCACCACAGGCTGGCCTG...CATGGTGCCTGGGGGCAGGAGGATCCTGACTAGAAAGCGATTGGTCTGCATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCTAAACCTGGCTGTCTaGAGAGATTCCAGAAAGGTC +
Preference number: 2 (lower is better)
Translates to: SCPPAQVQISVEQCWHSELNLAV*RDSRKV
Trigger: GACCTTTCTGGAATCTCTTCAGACAGCCAGGTTTAG...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTAATAGAGGATGCACCCTaGACAGTATGGCTTCCACAG +
Preference number: 2 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLIEDAP*TVWLPQ
Trigger: CTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTAT...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp CCCCAGGCCTTTTGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTTACCAACATAGAAGTTaGGAGAGGGGATGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: PQAFCHLETIGSTNLNLAYQHRS*ERGCGR
Trigger: CCTCCCGCATCCCCTCTCCCAACTTCTATGTTGGTA...AGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTATCACTCCACACACTGTaGGCTGCAAAGGAGATACTG +
Preference number: 2 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLSLHTL*AAKEIL
Trigger: CAGTATCTCCTTTGCAGCCCACAGTGTGTGGAGTGA...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp CAAGGTCAGAAATGGAAGGGCGGGTTGAAGACAGGACCAGGAATACAGAGCTGTTCACTCCACACACTGTaGGCTGCAAAGGAGATACTG +
Preference number: 2 (lower is better)
Translates to: QGQKWKGGLKTGPGIQSCSLHTL*AAKEIL
Trigger: CAGTATCTCCTTTGCAGCCCACAGTGTGTGGAGTGA...ACAGCTCTGTATTCCTGGTCCTGTCTTCAACCCGCCCTTCCATTTCTGACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp CTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCCGAAAGTCTCACTTTCTaGGTAAGTGCCTCCCTATCT +
Preference number: 2 (lower is better)
Translates to: LPTSPGSDLCRTMLAFRAESLTF*VSASLS
Trigger: AGATAGGGAGGCACTTACCCAGAAAGTGAGACTTTC...GGCTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGTCTGTAGAACAATGCTaGCATTCAGAGCCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: SCPPAQVQISVEQCWHSESVEQC*HSEPGP
Trigger: AGGACCAGGCTCTGAATGCCAGCATTGTTCTACAGA...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGCACCTTCCTGTCGTCTaGAGCTGCCTTCTGTTGAGT +
Preference number: 2 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQHLPVV*SCLLLS
Trigger: ACTCAACAGAAGGCAGCTTCAGACGACAGGAAGGTG...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAACAACTCTGCAGCAGCTaGGGCTCAGGCCTGCACCTT +
Preference number: 2 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKQLCSS*GSGLHL
Trigger: AAGGTGCAGGCCTGAGCCTCAGCTGCTGCAGAGTTG...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGAATGGAAGGGCGGGTTaGAGACAGGACCAGGAATAC +
Preference number: 2 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQNGRAG*RQDQEY
Trigger: GTATTCCTGGTCCTGTCTTCAACCCGCCCTTCCATT...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp CATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGGAAGCCCTCTGTCCTCTTACATaGTCCCAAGCCCCACAGGAA +
Preference number: 2 (lower is better)
Translates to: HRGCTLNSMASTAFFMEALCPLT*SQAPQE
Trigger: TTCCTGTGGGGCTTGGGATCATGTAAGAGGACAGAG...GGCTTCCATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp AGTCAAACCCTGTCTCAGACAGGCAGTCGGTCAGGAGACAGCGACGCAATGCAAATGATAACTCACACCTaGTTGCAACTCGTTTTAGGG +
Preference number: 2 (lower is better)
Translates to: SQTLSQTGSRSGDSDAMQMITHT*LQLVLG
Trigger: CCCTAAAACGAGTTGCAAGCAGGTGTGAGTTATCAT...TTGCATTGCGTCGCTGTCTCCTGACCGACTGCCTGTCTGAGACAGGGTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGGAAAGTCTCACTTTCTaGGTAAGTGCCTCCCTATCT +
Preference number: 2 (lower is better)
Translates to: SCPPAQVQISVEQCWHSEESLTF*VSASLS
Trigger: AGATAGGGAGGCACTTACCCAGAAAGTGAGACTTTC...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp CTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCCGAAGTGAGGGTACGTTaGCAGTTCATAGAATATCAG +
Preference number: 2 (lower is better)
Translates to: LPTSPGSDLCRTMLAFRAEVRVR*QFIEYQ
Trigger: CTGATATTCTATGAACTGCCAACGTACCCTCACTTC...GGCTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp TCAGATCATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGGAAGCTGCCTTCTGTTaGGTTGAAGCGAGGGTCACC +
Preference number: 2 (lower is better)
Translates to: SDHRGCTLNSMASTAFFMEAAFC*VEARVT
Trigger: GGTGACCCTCGCTTCAACTCAACAGAAGGCAGCTTC...CATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATGATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp GCTGCAAAGGAGATACTGAGAACTACCAACATAGAAGTTGGGAGAGGGGATGCGAATGGAAGCGTTCTGTaGGGAGCAGAAACTGCTTCT +
Preference number: 2 (lower is better)
Translates to: AAKEILRTTNIEVGRGDANGSVL*GAETAS
Trigger: AGAAGCAGTTTCTGCTCCTCACAGAACGCTTCCATT...CGCATCCCCTCTCCCAACTTCTATGTTGGTAGTTCTCAGTATCTCCTTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGTAGAGAACTTCCCCTaGTTTCTTTCCCCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQVENFP*FLSPGL
Trigger: AAGGCCTGGGGAAAGAAAGCAGGGGAAGTTCTCTAC...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp AAGAGATTCCAGAAAGGTCCAGCAAAAGGCAGCCAGACTTCCCTGACTCTCCCTGGACAGAATCAACCTTaGGTCCCAAATGGTGTTACT +
Preference number: 2 (lower is better)
Translates to: KRFQKGPAKGSQTSLTLPGQNQP*VPNGVT
Trigger: AGTAACACCATTTGGGACCCAAGGTTGATTCTGTCC...AGGGAGAGTCAGGGAAGTCTGGCTGCCTTTTGCTGGACCTTTCTGGAATCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp CGCTGTGATTATCTTGTTATATCGAACACTGTACATGGTGTAGCCAGCTGTGACCTGGTCACTCTGCACTaGACACTGCACTTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: RCDYLVISNTVHGVASCDLVTLH*TLHFPV
Trigger: CACTGGAAAGTGCAGTGTGCAGTGCAGAGTGACCAG...GTCACAGCTGGCTACACCATGTACAGTGTTCGATATAACAAGATAATCACAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp TCAGATCATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGCCTCTCCTCTGCTGGTaGCTCTCAGCATGTTACAGA +
Preference number: 2 (lower is better)
Translates to: SDHRGCTLNSMASTAFFMPLLCW*LSACYR
Trigger: TCTGTAACATGCTGAGAGCCACCAGCAGAGGAGAGG...CATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATGATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAACACCTAAGGAACATCTaGCAGACTTCCTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKHLRNI*QTSWPQ
Trigger: CTGAGGCCAGGAAGTCTGTCAGATGTTCCTTAGGTG...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp ACTGTGGTCAGAGGTACAGGGCCACTTACACTAAACACACACCAAAGGCATCAAGGACAGAATCAACCTTaGGTCCCAAATGGTGTTACT +
Preference number: 2 (lower is better)
Translates to: TVVRGTGPLTLNTHQRHQGQNQP*VPNGVT
Trigger: AGTAACACCATTTGGGACCCAAGGTTGATTCTGTCC...TTGATGCCTTTGGTGTGTGTTTAGTGTAAGTGGCCCTGTACCTCTGACCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAACCGGTGACGAAGAGGTaGACATTCTTTGGAGACTGC +
Preference number: 2 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKPVTKR*TFFGDC
Trigger: GCAGTCTCCAAAGAATGTCCACCTCTTCGTCACCGG...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp TTCTTTGTTGACATGTTGTTGAAACGGATCTTGGGATGGCCTCTGGGAACAACTTTCCAGGCTGAACAGTaGCTCGTGTTTCACATCTGT +
Preference number: 2 (lower is better)
Translates to: FFVDMLLKRILGWPLGTTFQAEQ*LVFHIC
Trigger: ACAGATGTGAAACACGAGTCACTGTTCAGCCTGGAA...AGTTGTTCCCAGAGGCCATCCCAAGATCCGTTTCAACAACATGTCAACAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195848.2
3UTR-3UTR GCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAAACTTCCTGGCCTCAGTaGCAAGGTCAAGACAGAGTA +
Preference number: 2 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKTSWPQ*QGQDRV
Trigger: TACTCTGTCTTGACCTTGGCACTGAGGCCAGGAAGT...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp CGCTGTGATTATCTTGTTATATCGAACACTGTACATGGTGTAGCCAGCTGTGACCAGGCCAGCCTGTGGTaGACACTCTTATCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: RCDYLVISNTVHGVASCDQASLW*TLLSLK
Trigger: TTTTAAAGATAAGAGTGTTCACCACAGGCTGGCCTG...GTCACAGCTGGCTACACCATGTACAGTGTTCGATATAACAAGATAATCACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp TTCTTTGTTGACATGTTGTTGAAACGGATCTTGGGATGGCCTCTGGGAACAACTCGTGTTTCACATCTGTaGACTCCTCTGAGGATTTCT +
Preference number: 2 (lower is better)
Translates to: FFVDMLLKRILGWPLGTTRVSHL*TPLRIS
Trigger: AGAAATCCTCAGAGGAGTTCACAGATGTGAAACACG...AGTTGTTCCCAGAGGCCATCCCAAGATCCGTTTCAACAACATGTCAACAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195848.2
3UTR-3UTR GCA 90 bp TCTTCAGAAAGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCCACACACTGTGGGCTaGAAAGGAGATACTGAGAAC +
Preference number: 2 (lower is better)
Translates to: SSESLEGSQNNCLGEKEAPHTVG*KGDTEN
Trigger: GTTCTCAGTATCTCCTTTGCAGCCCACAGTGTGTGG...AGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACTTTCTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp CGCTGTGATTATCTTGTTATATCGAACACTGTACATGGTGTAGCCAGCTGTGACCAAAAAGAAAAGAGCTaGGTAGCTGTGACCACTGTG +
Preference number: 2 (lower is better)
Translates to: RCDYLVISNTVHGVASCDQKEKS*VAVTTV
Trigger: CACAGTGGTCACAGCTACCCAGCTCTTTTCTTTTTG...GTCACAGCTGGCTACACCATGTACAGTGTTCGATATAACAAGATAATCACAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp TCAGATCATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGCAAAAAGAAAAGAGCTaGGTAGCTGTGACCACTGTG +
Preference number: 2 (lower is better)
Translates to: SDHRGCTLNSMASTAFFMQKEKS*VAVTTV
Trigger: CACAGTGGTCACAGCTACCCAGCTCTTTTCTTTTTG...CATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATGATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR TCA 90 bp TTTATGGAAGCCTCTGGGACCTCACAGCCACCTAGACTTTATACATCATGGCTTAGAATATCAGGTTCCTaGTGCCTTTTATTGTGTACC +
Preference number: 2 (lower is better)
Translates to: FMEASGTSQPPRLYTSWLRISGS*CLLLCT
Trigger: GGTACACAATAAAAGGCATCAGGAACCTGATATTCT...AAGCCATGATGTATAAAGTCTAGGTGGCTGTGAGGTCCCAGAGGCTTCCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp TCAGATCATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGGCTGTCTCGAGTCAATaGCTTTTGCACAAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: SDHRGCTLNSMASTAFFMAVSSQ*LLHKKK
Trigger: TTTCTTTTTGTGCAAAAGGCATTGACTCGAGACAGC...CATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATGATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp TTTATGGAAGCCTCTGGGACCTCACAGCCACCTAGACTTTATACATCATGGCTTATTAATTTTGTAAAATaGGATAGCTCTTGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: FMEASGTSQPPRLYTSWLINFVK*DSSWEV
Trigger: CACCTCCCAAGAGCTATCGCATTTTACAAAATTAAT...AAGCCATGATGTATAAAGTCTAGGTGGCTGTGAGGTCCCAGAGGCTTCCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR GCA 90 bp TTTCATTTTCACCTGTTACACAATTCAAAAACCAACTTGGTGCTGAGGACAGAAGTGAGGAGCAGAAACTaGTTCTCTCCTTGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: FHFHLLHNSKTNLVLRTEVRSRN*FSPCRK
Trigger: CTTTCTGCAAGGAGAGAAGCAGTTTCTGCTCCTCAC...TTCTGTCCTCAGCACCAAGTTGGTTTTTGAATTGTGTAACAGGTGAAAATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR CCA 90 bp TTTATGGAAGCCTCTGGGACCTCACAGCCACCTAGACTTTATACATCATGGCTTATTTTCACTTTAGAGTaGAAGTTAGTCAAACCCTGT +
Preference number: 2 (lower is better)
Translates to: FMEASGTSQPPRLYTSWLIFTLE*KLVKPC
Trigger: ACAGGGTTTGACTAACTTCCACTCTAAAGTGAAAAT...AAGCCATGATGTATAAAGTCTAGGTGGCTGTGAGGTCCCAGAGGCTTCCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 90 bp TTACACAATTCAAAAACCAACTTGGTGCTGAGGACAGAATCAACCTaGGGTCCCAAATGGTGTTACTTGAACTGTAGAAATAAATGCTGC +
Preference number: 2 (lower is better)
Translates to: LHNSKTNLVLRTEST*GPKWCYLNCRNKCC
Trigger: GCAGCATTTATTTCTACAGTTCAAGTAACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTTTTGAATTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp GCAGCCTGCCTTCCCGCCACATGCCAGCCGAGGCTATaGTGCCCAAATGGCCACAGCCCAATGCAGAGGTCC +
Preference number: 3 (lower is better)
Translates to: AACLPATCQPRL*CPNGHSPMQRS
Trigger: GGACCTCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAAGGCAGGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp GCCGCCCGCTCCACACCAACCACAGCCGCCAGCCTCTaGGCATCATACTTGGAATACAGCACGGTGCACGTC +
Preference number: 3 (lower is better)
Translates to: AARSTPTTAASL*ASYLEYSTVHV
Trigger: GACGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGGCGGCTGTGGTTGGTGTGGAGCGGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp CTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCCGAAGGGACGGCCAGGTaGAGCTGCCCACCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: LPTSPGSDLCRTMLAFRAEGTAR*SCPPAQ
Trigger: CTGGGCTGGTGGGCAGCTCAACCTGGCCGTCCCTTC...GGCTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 72 bp CCAGCCTCTGGGCATCATACTTGGAATACAGCACGGTaGACGTCCACGTGGCCTCCTCTCCTCTGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: PASGHHTWNTAR*TSTWPPLLCWW
Trigger: CCACCAGCAGAGGAGAGGAGGCCACGTGGACGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR GCA 72 bp GAAGAGGTGGACATTCTTTGGAGACTGCAGCATCTGTaGCGCCCGCTCCACACCAACCACAGCCGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: EEVDILWRLQHL*RPLHTNHSRQP
Trigger: AGGCTGGCGGCTGTGGTTGGTGTGGAGCGGGCGGCACAGATGCTGCAGTCTCCAAAGAATGTCCACCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR CCA 72 bp CACCAACCACAGCCGCCAGCCTCTGGGCATCATACTTaGAATACAGCACGGTGCACGTCCACGTGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: HQPQPPASGHHT*NTARCTSTWPP
Trigger: AGGAGGCCACGTGGACGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGGCGGCTGTGGTTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR GCA 72 bp ACAGCACGGTGCACGTCCACGTGGCCTCCTCTCCTCTaGTGGTGGCTCTCAGCATGTTACAGACCTCACTGT +
Preference number: 3 (lower is better)
Translates to: TARCTSTWPPLL*WWLSACYRPHC
Trigger: ACAGTGAGGTCTGTAACATGCTGAGAGCCACCAGCAGAGGAGAGGAGGCCACGTGGACGTGCACCGTGCTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR TCA 72 bp CACTGGTCACTCTGCACTGCACACTGCACTTTCCAGTaGCACAGGACTGCAGACTGCCTGGAGCCCGTTCCT +
Preference number: 3 (lower is better)
Translates to: HWSLCTAHCTFQ*HRTADCLEPVP
Trigger: AGGAACGGGCTCCAGGCAGTCTGCAGTCCTGTGTCACTGGAAAGTGCAGTGTGCAGTGCAGAGTGACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR TCA 72 bp GGCCCAGTGAGGTCACAGCCCCACCTAAGGAACATCTaGCAGACTTCCTGGCCTCAGTGCCAAGGTCAAGAC +
Preference number: 3 (lower is better)
Translates to: GPVRSQPHLRNI*QTSWPQCQGQD
Trigger: GTCTTGACCTTGGCACTGAGGCCAGGAAGTCTGTCAGATGTTCCTTAGGTGGGGCTGTGACCTCACTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 72 bp TCTCCGGTGACGAAGAGGTGGACATTCTTTGGAGACTaGAGCATCTGTGCCGCCCGCTCCACACCAACCACA +
Preference number: 3 (lower is better)
Translates to: SPVTKRWTFFGD*SICAARSTPTT
Trigger: TGTGGTTGGTGTGGAGCGGGCGGCACAGATGCTGCAGTCTCCAAAGAATGTCCACCTCTTCGTCACCGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR CCA 72 bp GTGACACAGGACTGCAGACTGCCTGGAGCCCGTTCCTaGGGCAGTGAACAGATCAGGTCTATGAGGTCCAAC +
Preference number: 3 (lower is better)
Translates to: VTQDCRLPGARS*GSEQIRSMRSN
Trigger: GTTGGACCTCATAGACCTGATCTGTTCACTGCCCCAGGAACGGGCTCCAGGCAGTCTGCAGTCCTGTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp AATCACGATGGCTTGGTCAGGCCACCCCTGACCTGTTaGCCTCAGGGAGAGCAGGCTAGCAGGATGTTCTCT +
Preference number: 3 (lower is better)
Translates to: NHDGLVRPPLTC*PQGEQASRMFS
Trigger: AGAGAACATCCTGCTAGCCTGCTCTCCCTGAGGCCAACAGGTCAGGGGTGGCCTGACCAAGCCATCGTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 72 bp AGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATaGAGAGGTCCAAGACTGACAATCACGATGGCTTGG +
Preference number: 3 (lower is better)
Translates to: SRGYGAQMATAQ*RGPRLTITMAW
Trigger: CCAAGCCATCGTGATTGTCAGTCTTGGACCTCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR TCA 72 bp CGTGTTTCCAGCACTCCAAGAGCAGGGAGACTGCCATaGGTTCCAGGCCAGCCTGTGGTGAACACTCTTATC +
Preference number: 3 (lower is better)
Translates to: RVSSTPRAGRLP*VPGQPVVNTLI
Trigger: GATAAGAGTGTTCACCACAGGCTGGCCTGGAACTCATGGCAGTCTCCCTGCTCTTGGAGTGCTGGAAACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 72 bp GTTCTCTCCAGTAGTGAAGGGACGGCCAGGTTGAGCTaGCCACCAGCCCAGGTTCAGATCTCTGTAGAACAA +
Preference number: 3 (lower is better)
Translates to: VLSSSEGTARLS*PPAQVQISVEQ
Trigger: TTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCTCAACCTGGCCGTCCCTTCACTACTGGAGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGAGGCGCTGTGATTATCTaGTTATATCGAACACTGTAC +
Preference number: 3 (lower is better)
Translates to: PPHASRGYGAQMATAQCRGAVII*LYRTLY
Trigger: GTACAGTGTTCGATATAACAAGATAATCACAGCGCC...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTAGCCCTCAGCATCTTCTaGTCCCCCACAAAGGGTGCA +
Preference number: 3 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLALSIF*SPTKGA
Trigger: TGCACCCTTTGTGGGGGACAAGAAGATGCTGAGGGC...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGAAGAAGTGAGGGTACGTaGGCAGTTCATAGAATATCA +
Preference number: 3 (lower is better)
Translates to: PPHASRGYGAQMATAQCRRSEGT*AVHRIS
Trigger: TGATATTCTATGAACTGCCAACGTACCCTCACTTCT...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR TCA 72 bp GCCTGCACCTTCCTGTCGTCTGAAGCTGCCTTCTGTTaGGTTGAAGCGAGGGTCACCTGTGATGGTTCTTAT +
Preference number: 3 (lower is better)
Translates to: ACTFLSSEAAFC*VEARVTCDGSY
Trigger: ATAAGAACCATCACAGGTGACCCTCGCTTCAACTCAACAGAAGGCAGCTTCAGACGACAGGAAGGTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTACTTTCCCCAGGCCTTTaGTCATCTGGAGACCATAGG +
Preference number: 3 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLLSPGL*SSGDHR
Trigger: CCTATGGTCTCCAGATGACAAAAGGCCTGGGGAAAG...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGAGGACAGAATCAACCTaGGGTCCCAAATGGTGTTAC +
Preference number: 3 (lower is better)
Translates to: SCPPAQVQISVEQCWHSERTEST*GPKWCY
Trigger: GTAACACCATTTGGGACCCAAGGTTGATTCTGTCCT...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGTCGATCATAAGCCCTTaGGAAGCCTGCAGAGGGCTG +
Preference number: 3 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQSIISP*EACRGL
Trigger: CAGCCCTCTGCAGGCTTCCAAAGGGCTTATGATCGA...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR TCA 72 bp GCCTGCAGAGGGCTGAAGCCTCTGCCTCAGGCGCTGTaGTTATCTTGTTATATCGAACACTGTACATGGTGT +
Preference number: 3 (lower is better)
Translates to: ACRGLKPLPQAL*LSCYIEHCTWC
Trigger: ACACCATGTACAGTGTTCGATATAACAAGATAATCACAGCGCCTGAGGCAGAGGCTTCAGCCCTCTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp TTTGGAAGTTTGGCTAGAAAAGTAAAGTGCCAAGACTaGGACATAGCCCGGGACACCTCCTGCTCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: FGSLARKVKCQD*DIARDTSCSQP
Trigger: TGGCTGAGAGCAGGAGGTGTCCCGGGCTATGTCCCAGTCTTGGCACTTTACTTTTCTAGCCAAACTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp ACTGCTTCTCTCCTTGCAGAAAGAAGTGTCGAGCCCTaGAGATCCCAGACTTCTGCGTATACTCGCAGATGT +
Preference number: 3 (lower is better)
Translates to: TASLLAERSVEP*RSQTSAYTRRC
Trigger: ACATCTGCGAGTATACGCAGAAGTCTGGGATCTCCAGGGCTCGACACTTCTTTCTGCAAGGAGAGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp CCCCCATCTTGCCTAGGCCACCTGCACTCGATCATAAGCCCTTTGGAAGCCTGCCCCAAATGGTGTTACTaGAACTGTAGAAATAAATGC +
Preference number: 3 (lower is better)
Translates to: PPSCLGHLHSIISPLEACPKWCY*NCRNKC
Trigger: GCATTTATTTCTACAGTTCAAGTAACACCATTTGGG...GCAGGCTTCCAAAGGGCTTATGATCGAGTGCAGGTGGCCTAGGCAAGATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp TTTATGGAAGCCTCTGGGACCTCACAGCCACCTAGACTTTATACATCATGGCTTCTGCCTTCTGTTGAGTaGAAGCGAGGGTCACCTGTG +
Preference number: 3 (lower is better)
Translates to: FMEASGTSQPPRLYTSWLLPSVE*KRGSPV
Trigger: CACAGGTGACCCTCGCTTCAACTCAACAGAAGGCAG...AAGCCATGATGTATAAAGTCTAGGTGGCTGTGAGGTCCCAGAGGCTTCCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp CAAGGTCAGAAATGGAAGGGCGGGTTGAAGACAGGACCAGGAATACAGAGCTGTAAACTGCTTCTCTCCTaGCAGAAAGAAGTGTCGAGC +
Preference number: 3 (lower is better)
Translates to: QGQKWKGGLKTGPGIQSCKLLLS*QKEVSS
Trigger: GCTCGACACTTCTTTCTGCAAGGAGAGAAGCAGTTT...ACAGCTCTGTATTCCTGGTCCTGTCTTCAACCCGCCCTTCCATTTCTGACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR TCA 72 bp GAATTCAAGGTCAAGGTCAGAAATGGAAGGGCGGGTTaGAGACAGGACCAGGAATACAGAGCTGTCCTCACT +
Preference number: 3 (lower is better)
Translates to: EFKVKVRNGRAG*RQDQEYRAVLT
Trigger: AGTGAGGACAGCTCTGTATTCCTGGTCCTGTCTTCAACCCGCCCTTCCATTTCTGACCTTGACCTTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR TCA 72 bp CTCTGTAGAACAATGCTGGCATTCAGAGCCTGGTCCTaGCTCCAGAGTACAAGGATAGTTGAGCACCTGCTT +
Preference number: 3 (lower is better)
Translates to: LCRTMLAFRAWS*LQSTRIVEHLL
Trigger: AAGCAGGTGCTCAACTATCCTTGTACTCTGGAGTCAGGACCAGGCTCTGAATGCCAGCATTGTTCTACAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 72 bp AGGGAAGGAAGGCTGAAGGCCTCAGATCATAGAGGATaGACCCTGAACAGTATGGCTTCCACAGCATTCTTT +
Preference number: 3 (lower is better)
Translates to: REGRLKASDHRG*TLNSMASTAFF
Trigger: AAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATGATCTGAGGCCTTCAGCCTTCCTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp TTCTTTGTTGACATGTTGTTGAAACGGATCTTGGGATaGCCTCTGGGAACAACTGCCCCCGCTATCCTCTTC +
Preference number: 3 (lower is better)
Translates to: FFVDMLLKRILG*PLGTTAPAILF
Trigger: GAAGAGGATAGCGGGGGCAGTTGTTCCCAGAGGCCATCCCAAGATCCGTTTCAACAACATGTCAACAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195848.2
3UTR-3UTR CAA 90 bp CCCCAGGCCTTTTGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTAGGACAGAATCAACCTaGGGTCCCAAATGGTGTTAC +
Preference number: 3 (lower is better)
Translates to: PQAFCHLETIGSTNLNLARTEST*GPKWCY
Trigger: GTAACACCATTTGGGACCCAAGGTTGATTCTGTCCT...AGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp GTGTATAAATTAAACATAAAGCACGGCCAGGCATGGTaGCTTCAAGCCCGTGTTTCCAGCACTCCAAGAGCA +
Preference number: 3 (lower is better)
Translates to: VYKLNIKHGQAW*LQARVSSTPRA
Trigger: TGCTCTTGGAGTGCTGGAAACACGGGCTTGAAGCCACCATGCCTGGCCGTGCTTTATGTTTAATTTATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp CCTCCCTATCTAAGACTGGGATCACTCCACACACTGTaGGCTGCAAAGGAGATACTGAGAACTACCAACATA +
Preference number: 3 (lower is better)
Translates to: PPYLRLGSLHTL*AAKEILRTTNI
Trigger: TATGTTGGTAGTTCTCAGTATCTCCTTTGCAGCCCACAGTGTGTGGAGTGATCCCAGTCTTAGATAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp TGTGACCACTGTGCAGAGTCTGAAAGTCTCACTTTCTaGGTAAGTGCCTCCCTATCTAAGACTGGGATCACT +
Preference number: 3 (lower is better)
Translates to: CDHCAESESLTF*VSASLSKTGIT
Trigger: AGTGATCCCAGTCTTAGATAGGGAGGCACTTACCCAGAAAGTGAGACTTTCAGACTCTGCACAGTGGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp AAGAGATTCCAGAAAGGTCCAGCAAAAGGCAGCCAGACTTCCCTGACTCTCCCTTCGAGTCAATGCCTTTaGCACAAAAAGAAAAGAGCT +
Preference number: 3 (lower is better)
Translates to: KRFQKGPAKGSQTSLTLPSSQCL*HKKKRA
Trigger: AGCTCTTTTCTTTTTGTGCAAAAGGCATTGACTCGA...AGGGAGAGTCAGGGAAGTCTGGCTGCCTTTTGCTGGACCTTTCTGGAATCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp CCCCAGGCCTTTTGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTGGCGCTGTGATTATCTaGTTATATCGAACACTGTAC +
Preference number: 3 (lower is better)
Translates to: PQAFCHLETIGSTNLNLAGAVII*LYRTLY
Trigger: GTACAGTGTTCGATATAACAAGATAATCACAGCGCC...AGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTACCCAAATGGTGTTACTaGAACTGTAGAAATAAATGC +
Preference number: 3 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLPKWCY*NCRNKC
Trigger: GCATTTATTTCTACAGTTCAAGTAACACCATTTGGG...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR GCA 72 bp CTATCTAAGACTGGGATCACTCCACACACTGTGGGCTaGAAAGGAGATACTGAGAACTACCAACATAGAAGT +
Preference number: 3 (lower is better)
Translates to: LSKTGITPHTVG*KGDTENYQHRS
Trigger: ACTTCTATGTTGGTAGTTCTCAGTATCTCCTTTGCAGCCCACAGTGTGTGGAGTGATCCCAGTCTTAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR TCA 72 bp TGTTATATCGAACACTGTACATGGTGTAGCCAGCTGTaGCAGCTGTCTCGAGTCAATGCCTTTTGCACAAAA +
Preference number: 3 (lower is better)
Translates to: CYIEHCTWCSQL*QLSRVNAFCTK
Trigger: TTTTGTGCAAAAGGCATTGACTCGAGACAGCTGTCACAGCTGGCTACACCATGTACAGTGTTCGATATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp AGGAAAAGATTAAGAATTCAAGGTCAAGGTCAGAAATaGAAGGGCGGGTTGAAGACAGGACCAGGAATACAG +
Preference number: 3 (lower is better)
Translates to: RKRLRIQGQGQK*KGGLKTGPGIQ
Trigger: CTGTATTCCTGGTCCTGTCTTCAACCCGCCCTTCCATTTCTGACCTTGACCTTGAATTCTTAATCTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp CTTCAGAAAGTCTTGAAGGAAGTCAGAATAATTGCCTaGGAGAAAAAGAGGCTCACTGGAAATGAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: LQKVLKEVRIIA*EKKRLTGNEQP
Trigger: AGGCTGCTCATTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACTTTCTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CCA 72 bp CATGTTACAGACCTCACTGTAGAAGTGAGGGTACGTTaGCAGTTCATAGAATATCAGGTTCCTGATGCCTTT +
Preference number: 3 (lower is better)
Translates to: HVTDLTVEVRVR*QFIEYQVPDAF
Trigger: AAAGGCATCAGGAACCTGATATTCTATGAACTGCCAACGTACCCTCACTTCTACAGTGAGGTCTGTAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
3UTR TCA 72 bp TTCACCTGTTACACAATTCAAAAACCAACTTGGTGCTaGGGACAGAATCAACCTTGGGTCCCAAATGGTGTT +
Preference number: 3 (lower is better)
Translates to: FTCYTIQKPTWC*GQNQPWVPNGV
Trigger: AACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTTTTGAATTGTGTAACAGGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR TCA 72 bp ATTTCCTTCTCTTTCAGTTCTTTGTTGACATGTTGTTaGAACGGATCTTGGGATGGCCTCTGGGAACAACTG +
Preference number: 3 (lower is better)
Translates to: ISFSFSSLLTCC*NGSWDGLWEQL
Trigger: CAGTTGTTCCCAGAGGCCATCCCAAGATCCGTTTCAACAACATGTCAACAAAGAACTGAAAGAGAAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195848.2
3UTR CCA 72 bp TTGGTGCTGAGGACAGAATCAACCTTGGGTCCCAAATaGTGTTACTTGAACTGTAGAAATAAATGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LVLRTESTLGPK*CYLNCRNKCCF
Trigger: AAAGCAGCATTTATTTCTACAGTTCAAGTAACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR-3UTR CAA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAATCGAGTCAATGCCTTTaGCACAAAAAGAAAAGAGCT +
Preference number: 3 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKSSQCL*HKKKRA
Trigger: AGCTCTTTTCTTTTTGTGCAAAAGGCATTGACTCGA...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp TTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCTCTTGGTCATGGTGCTaGGCATCTGGCTGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: FPPHASRGYGAQMATAQCSWSWC*ASGCGP
Trigger: GGGGCCGCAGCCAGATGCTCAGCACCATGACCAAGA...GCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp TTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGACTGCAGCATCTGTaGCGCCCGCTCCACACCAAC +
Preference number: 4 (lower is better)
Translates to: FPPHASRGYGAQMATAQCRLQHL*RPLHTN
Trigger: GTTGGTGTGGAGCGGGCGGCACAGATGCTGCAGTCT...GCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR CCA 90 bp TTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCCAGTTGCTGGGTAGCTaGAGGGCTGGAAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FPPHASRGYGAQMATAQCQLLGS*RAGSSS
Trigger: GCTGCTGCTTCCAGCCCTCCAGCTACCCAGCAACTG...GCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp GAGCAGCCTGCCTTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCGGCCTGGTGAGCCCTTaGTCCCTGAAGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: EQPAFPPHASRGYGAQMAGLVSP*SLKSSS
Trigger: AGATGATGACTTCAGGGACCAAGGGCTCACCAGGCC...GGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAAGGCAGGCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 72 bp ACACCAACCACAGCCGCCAGCCTCTGGGCATCATACTaGGAATACAGCACGGTGCACGTCCACGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPTTAASLWASY*EYSTVHVHVAS
Trigger: GGAGGCCACGTGGACGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGGCGGCTGTGGTTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGAACAGCCACCTGGCCTTaGGCATTGATGCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PPHASRGYGAQMATAQCRTATWP*ALMQCL
Trigger: CAAGCACTGCATCAATGCTCAAGGCCAGGTGGCTGT...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp TTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGCTGCACCAACACATaGCTGATGGAGCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: FPPHASRGYGAQMATAQCSCTNT*LMEPVM
Trigger: CATGACGGGCTCCATCAGTCATGTGTTGGTGCAGCT...GCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp TTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCATTCTCTGGAAGACGTaGGGGAGCTGCACCAACACA +
Preference number: 4 (lower is better)
Translates to: FPPHASRGYGAQMATAQCILWKT*GSCTNT
Trigger: TGTGTTGGTGCAGCTCCCTCACGTCTTCCAGAGAAT...GCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp AGTGGCCTAACGGGGCCCAGTGAGGTCACAGCCCCACCTAAGGAACATCTGACATGGCCTCCTCTCCTCTaGTGGTGGCTCTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SGLTGPSEVTAPPKEHLTWPPLL*WWLSAC
Trigger: ACATGCTGAGAGCCACCAGCAGAGGAGAGGAGGCCA...TGTCAGATGTTCCTTAGGTGGGGCTGTGACCTCACTGGGCCCCGTTAGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR TCA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGAACTTGGACCAGTTATTaGGGCTCCACATTCGGACTC +
Preference number: 4 (lower is better)
Translates to: PPHASRGYGAQMATAQCRTWTSY*GSTFGL
Trigger: GAGTCCGAATGTGGAGCCTCAATAACTGGTCCAAGT...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp GCACGTGTGATGGGAGCCTACAGTCCTGCCCGTGTCCTCTCACTGTCTAGACCACAGCTTCTCCCACACTaGCATCCTCACTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ARVMGAYSPARVLSLSRPQLLPH*HPHCQL
Trigger: AAGCTGGCAGTGAGGATGGCAGTGTGGGAGAAGCTG...TGGTCTAGACAGTGAGAGGACACGGGCAGGACTGTAGGCTCCCATCACACGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp GGCACTGCACGTGTGATGGGAGCCTACAGTCCTGCCCGTGTCCTCTCACTGTCTTTGATCTGGGCATCCTaGAGGGCACCAAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GTARVMGAYSPARVLSLSLIWAS*RAPKSS
Trigger: ACTGCTCTTTGGTGCCCTGCAGGATGCCCAGATCAA...AGACAGTGAGAGGACACGGGCAGGACTGTAGGCTCCCATCACACGTGCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp CCTGGAGCCCGTTCCTGGGGCAGTGAACAGATCAGGTCTATGAGGTCCAACAATCTCCTTCACCACCAATaGTGGTCCTCAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGARSWGSEQIRSMRSNNLLHHQ*WSSSPG
Trigger: CCCTGGGCTTGAGGACCATCATTGGTGGTGAAGGAG...ATTGTTGGACCTCATAGACCTGATCTGTTCACTGCCCCAGGAACGGGCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp AGTGGCCTAACGGGGCCCAGTGAGGTCACAGCCCCACCTAAGGAACATCTGACATTGATCTGGGCATCCTaGAGGGCACCAAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SGLTGPSEVTAPPKEHLTLIWAS*RAPKSS
Trigger: ACTGCTCTTTGGTGCCCTGCAGGATGCCCAGATCAA...TGTCAGATGTTCCTTAGGTGGGGCTGTGACCTCACTGGGCCCCGTTAGGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGAAAGAACAGCTCTTTCTaGAGCGGGGTAAAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PPHASRGYGAQMATAQCRKNSSF*SGVKEL
Trigger: TAGCTCCTTTACCCCGCTCCAGAAAGAGCTGTTCTT...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 72 bp CAGGATGTTCTCTCCAGTAGTGAAGGGACGGCCAGGTaGAGCTGCCCACCAGCCCAGGTTCAGATCTCTGTA +
Preference number: 4 (lower is better)
Translates to: QDVLSSSEGTAR*SCPPAQVQISV
Trigger: TACAGAGATCTGAACCTGGGCTGGTGGGCAGCTCAACCTGGCCGTCCCTTCACTACTGGAGAGAACATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp GCACGTGTGATGGGAGCCTACAGTCCTGCCCGTGTCCTCTCACTGTCTAGACCATTGTTAGCCAGCACCTaGGCATTGGCTTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: ARVMGAYSPARVLSLSRPLLAST*ALALRT
Trigger: TGTCCTCAAAGCCAATGCTCAGGTGCTGGCTAACAA...TGGTCTAGACAGTGAGAGGACACGGGCAGGACTGTAGGCTCCCATCACACGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp GCACGTGTGATGGGAGCCTACAGTCCTGCCCGTGTCCTCTCACTGTCTAGACCAAGACGGATGCTCCTCTaGAGTATTGCCACTCCAATC +
Preference number: 4 (lower is better)
Translates to: ARVMGAYSPARVLSLSRPRRMLL*SIATPI
Trigger: GATTGGAGTGGCAATACTTCAGAGGAGCATCCGTCT...TGGTCTAGACAGTGAGAGGACACGGGCAGGACTGTAGGCTCCCATCACACGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp GAGCAGCCTGCCTTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCAGAATATCAGGTTCCTaGTGCCTTTTATTGTGTACC +
Preference number: 4 (lower is better)
Translates to: EQPAFPPHASRGYGAQMARISGS*CLLLCT
Trigger: GGTACACAATAAAAGGCATCAGGAACCTGATATTCT...GGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAAGGCAGGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR CCA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTACAGTTGCTGGGTAGCTaGAGGGCTGGAAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLQLLGS*RAGSSS
Trigger: GCTGCTGCTTCCAGCCCTCCAGCTACCCAGCAACTG...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp CTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCCCAGGCCTCTTCAGGTTaGGAGGTCTCTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPTSPGSDLCRTMLAFRAQASSG*EVSPQD
Trigger: ATCCTGAGGAGAGACCTCCCAACCTGAAGAGGCCTG...GGCTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp TTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCACTCCAATCCTGAAGTaGTCATCAATATTGCCCACG +
Preference number: 4 (lower is better)
Translates to: FPPHASRGYGAQMATAQCTPILK*SSILPT
Trigger: CGTGGGCAATATTGATGACCACTTCAGGATTGGAGT...GCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGATTCCTCATTCATTTCTaGATCACCTACAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: PPHASRGYGAQMATAQCRFLIHF*ITYSTV
Trigger: GACAGTGCTGTAGGTGATGCAGAAATGAATGAGGAA...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp CCCCCATCTTGCCTAGGCCACCTGCACTCGATCATAAGCCCTTTGGAAGCCTGCGTGAGGAGCAGAAACTaGTTCTCTCCTTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PPSCLGHLHSIISPLEACVRSRN*FSPCRK
Trigger: CTTTCTGCAAGGAGAGAAGCAGTTTCTGCTCCTCAC...GCAGGCTTCCAAAGGGCTTATGATCGAGTGCAGGTGGCCTAGGCAAGATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR CCA 90 bp CCCCCATCTTGCCTAGGCCACCTGCACTCGATCATAAGCCCTTTGGAAGCCTGCTTGGCTTTGAGGACATaGTTTATGGCATGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPSCLGHLHSIISPLEACLALRT*FMACRQ
Trigger: CTGCCTGCATGCCATAAACCATGTCCTCAAAGCCAA...GCAGGCTTCCAAAGGGCTTATGATCGAGTGCAGGTGGCCTAGGCAAGATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp AGTCAAACCCTGTCTCAGACAGGCAGTCGGTCAGGAGACAGCGACGCAATGCAACCTCTCCTCTGCTGGTaGCTCTCAGCATGTTACAGA +
Preference number: 4 (lower is better)
Translates to: SQTLSQTGSRSGDSDAMQPLLCW*LSACYR
Trigger: TCTGTAACATGCTGAGAGCCACCAGCAGAGGAGAGG...TTGCATTGCGTCGCTGTCTCCTGACCGACTGCCTGTCTGAGACAGGGTTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR TCA 90 bp GAACAACTGCCCCCGCTATCCTCTTCTAGAAAATTAGTTTCCAGGCTGAACAGTTCTTGGTCATGGTGCTaGGCATCTGGCTGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: EQLPPLSSSRKLVSRLNSSWSWC*ASGCGP
Trigger: GGGGCCGCAGCCAGATGCTCAGCACCATGACCAAGA...ACTGTTCAGCCTGGAAACTAATTTTCTAGAAGAGGATAGCGGGGGCAGTTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195848.2
CDS-3UTR TCA 90 bp AAGAGATTCCAGAAAGGTCCAGCAAAAGGCAGCCAGACTTCCCTGACTCTCCCTACAGCCACCTGGCCTTaGGCATTGATGCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: KRFQKGPAKGSQTSLTLPTATWP*ALMQCL
Trigger: CAAGCACTGCATCAATGCTCAAGGCCAGGTGGCTGT...AGGGAGAGTCAGGGAAGTCTGGCTGCCTTTTGCTGGACCTTTCTGGAATCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp CCTGGGAGAAAAAGAGGCTCACTGGAAATGAGCAGCCTGCCTTCCCGCCACATGCACTGCCATCCTCACTaGCAGCTTCCTCATTCATTT +
Preference number: 4 (lower is better)
Translates to: PGRKRGSLEMSSLPSRHMHCHPH*QLPHSF
Trigger: AAATGAATGAGGAAGCTGGCAGTGAGGATGGCAGTG...CATGTGGCGGGAAGGCAGGCTGCTCATTTCCAGTGAGCCTCTTTTTCTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp GGCACTGCACGTGTGATGGGAGCCTACAGTCCTGCCCGTGTCCTCTCACTGTCTAGTGGTCATCAATATTaGCCACGAACACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GTARVMGAYSPARVLSLSSGHQY*PRTQLH
Trigger: ATGAAGCTGTGTTCGTGGGCAATATTGATGACCACT...AGACAGTGAGAGGACACGGGCAGGACTGTAGGCTCCCATCACACGTGCAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp CCTGGAGCCCGTTCCTGGGGCAGTGAACAGATCAGGTCTATGAGGTCCAACAATAAGATGTCCCAGGACTaGCCATTTCAGTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PGARSWGSEQIRSMRSNNKMSQD*PFQLLG
Trigger: ACCCAGCAACTGAAATGGCCAGTCCTGGGACATCTT...ATTGTTGGACCTCATAGACCTGATCTGTTCACTGCCCCAGGAACGGGCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp GCTGCAAAGGAGATACTGAGAACTACCAACATAGAAGTTGGGAGAGGGGATGCGAGGCTGATGAAGAGCTaGACCACCCGAAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AAKEILRTTNIEVGRGDARLMKS*TTRRAA
Trigger: AGCTGCCCTTCGGGTGGTCCAGCTCTTCATCAGCCT...CGCATCCCCTCTCCCAACTTCTATGTTGGTAGTTCTCAGTATCTCCTTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp CAAGGTCAGAAATGGAAGGGCGGGTTGAAGACAGGACCAGGAATACAGAGCTGTAGAAGTGTCGAGCCCTaGAGATCCCAGACTTCTGCG +
Preference number: 4 (lower is better)
Translates to: QGQKWKGGLKTGPGIQSCRSVEP*RSQTSA
Trigger: CGCAGAAGTCTGGGATCTCCAGGGCTCGACACTTCT...ACAGCTCTGTATTCCTGGTCCTGTCTTCAACCCGCCCTTCCATTTCTGACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR TCA 90 bp AGGGCGAGGGTGGGGAAACTGCGGTCAGGATGTAAAGTGAAACGATTAATCAATCTCCTTCACCACCAATaGTGGTCCTCAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RARVGKLRSGCKVKRLINLLHHQ*WSSSPG
Trigger: CCCTGGGCTTGAGGACCATCATTGGTGGTGAAGGAG...ATTGATTAATCGTTTCACTTTACATCCTGACCGCAGTTTCCCCACCCTCGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp CCCCCATCTTGCCTAGGCCACCTGCACTCGATCATAAGCCCTTTGGAAGCCTGCTTCCTCATTCATTTCTaGATCACCTACAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: PPSCLGHLHSIISPLEACFLIHF*ITYSTV
Trigger: GACAGTGCTGTAGGTGATGCAGAAATGAATGAGGAA...GCAGGCTTCCAAAGGGCTTATGATCGAGTGCAGGTGGCCTAGGCAAGATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp CCCCAGGCCTTTTGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTACTGGCCATTTCAGTTaGTGGGTAGCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PQAFCHLETIGSTNLNLATGHFS*WVAGGL
Trigger: CAGCCCTCCAGCTACCCAGCAACTGAAATGGCCAGT...AGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp GTGGGCTGCAAAGGAGATACTGAGAACTACCAACATAGAAGTTGGGAGAGGGGAACTGGCCATTTCAGTTaGTGGGTAGCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VGCKGDTENYQHRSWERGTGHFS*WVAGGL
Trigger: CAGCCCTCCAGCTACCCAGCAACTGAAATGGCCAGT...TCCCCTCTCCCAACTTCTATGTTGGTAGTTCTCAGTATCTCCTTTGCAGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp CCCCCATCTTGCCTAGGCCACCTGCACTCGATCATAAGCCCTTTGGAAGCCTGCAGTGGTCATCAATATTaGCCACGAACACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PPSCLGHLHSIISPLEACSGHQY*PRTQLH
Trigger: ATGAAGCTGTGTTCGTGGGCAATATTGATGACCACT...GCAGGCTTCCAAAGGGCTTATGATCGAGTGCAGGTGGCCTAGGCAAGATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp ACTATGCAGACCAATCGCTTTCTAGTCAGGATCCTCCTGCCCCCAGGCACCATGGAGATCCCAGACTTCTaGGTATACTCGCAGATGTGT +
Preference number: 4 (lower is better)
Translates to: TMQTNRFLVRILLPPGTMEIPDF*VYSQMC
Trigger: ACACATCTGCGAGTATACGCAGAAGTCTGGGATCTC...CATGGTGCCTGGGGGCAGGAGGATCCTGACTAGAAAGCGATTGGTCTGCATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR CCA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGAGGCTGATGAAGAGCTaGACCACCCGAAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQRLMKS*TTRRAA
Trigger: AGCTGCCCTTCGGGTGGTCCAGCTCTTCATCAGCCT...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAATCTTGGTCATGGTGCTaGGCATCTGGCTGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKSWSWC*ASGCGP
Trigger: GGGGCCGCAGCCAGATGCTCAGCACCATGACCAAGA...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp TCTCTCCTTGCAGAAAGAAGTGTCGAGCCCTGGAGATCCCAGACTTCTGCGTATAGACGGATGCTCCTCTaGAGTATTGCCACTCCAATC +
Preference number: 4 (lower is better)
Translates to: SLLAERSVEPWRSQTSAYRRMLL*SIATPI
Trigger: GATTGGAGTGGCAATACTTCAGAGGAGCATCCGTCT...ATACGCAGAAGTCTGGGATCTCCAGGGCTCGACACTTCTTTCTGCAAGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp TCTCTCCTTGCAGAAAGAAGTGTCGAGCCCTGGAGATCCCAGACTTCTGCGTATACTTGGACCAGTTATTaGGGCTCCACATTCGGACTC +
Preference number: 4 (lower is better)
Translates to: SLLAERSVEPWRSQTSAYTWTSY*GSTFGL
Trigger: GAGTCCGAATGTGGAGCCTCAATAACTGGTCCAAGT...ATACGCAGAAGTCTGGGATCTCCAGGGCTCGACACTTCTTTCTGCAAGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTAGACAAATCTGCGGCTTaGCTTCCTTCTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLDKSAA*LPSWKP
Trigger: GGGTTTCCAAGAAGGAAGCCAAGCCGCAGATTTGTC...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGAAATGTTTCCGTCTTCTaGAACTTTGATGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: PPHASRGYGAQMATAQCRNVSVF*NFDEKT
Trigger: TGTCTTTTCATCAAAGTTCCAGAAGACGGAAACATT...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGTTGGCTTTGAGGACATaGTTTATGGCATGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SCPPAQVQISVEQCWHSELALRT*FMACRQ
Trigger: CTGCCTGCATGCCATAAACCATGTCCTCAAAGCCAA...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp GCTGCAAAGGAGATACTGAGAACTACCAACATAGAAGTTGGGAGAGGGGATGCGCCGGTGACGAAGAGGTaGACATTCTTTGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: AAKEILRTTNIEVGRGDAPVTKR*TFFGDC
Trigger: GCAGTCTCCAAAGAATGTCCACCTCTTCGTCACCGG...CGCATCCCCTCTCCCAACTTCTATGTTGGTAGTTCTCAGTATCTCCTTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
3UTR CAA 72 bp GCACCTTCCTGTCGTCTGAAGCTGCCTTCTGTTGAGTaGAAGCGAGGGTCACCTGTGATGGTTCTTATTTGC +
Preference number: 4 (lower is better)
Translates to: APSCRLKLPSVE*KRGSPVMVLIC
Trigger: GCAAATAAGAACCATCACAGGTGACCCTCGCTTCAACTCAACAGAAGGCAGCTTCAGACGACAGGAAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp AAGAGATTCCAGAAAGGTCCAGCAAAAGGCAGCCAGACTTCCCTGACTCTCCCTCCTGAGCATTGGCTTTaGGGACATGGTTTATGGCAT +
Preference number: 4 (lower is better)
Translates to: KRFQKGPAKGSQTSLTLPPEHWL*GHGLWH
Trigger: ATGCCATAAACCATGTCCTCAAAGCCAATGCTCAGG...AGGGAGAGTCAGGGAAGTCTGGCTGCCTTTTGCTGGACCTTTCTGGAATCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp ACTGTGGTCAGAGGTACAGGGCCACTTACACTAAACACACACCAAAGGCATCAAATTCTCTGGAAGACGTaGGGGAGCTGCACCAACACA +
Preference number: 4 (lower is better)
Translates to: TVVRGTGPLTLNTHQRHQILWKT*GSCTNT
Trigger: TGTGTTGGTGCAGCTCCCTCACGTCTTCCAGAGAAT...TTGATGCCTTTGGTGTGTGTTTAGTGTAAGTGGCCCTGTACCTCTGACCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp AGGGCGAGGGTGGGGAAACTGCGGTCAGGATGTAAAGTGAAACGATTAATCAATGGGCGTAGAGACGGATaGTCCTCTGAAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: RARVGKLRSGCKVKRLINGRRDG*SSEVLP
Trigger: TGGCAATACTTCAGAGGAGCATCCGTCTCTACGCCC...ATTGATTAATCGTTTCACTTTACATCCTGACCGCAGTTTCCCCACCCTCGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp CCCCAGGCCTTTTGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTAAGATGTCCCAGGACTaGCCATTTCAGTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PQAFCHLETIGSTNLNLAKMSQD*PFQLLG
Trigger: ACCCAGCAACTGAAATGGCCAGTCCTGGGACATCTT...AGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 72 bp AGAATTCAAGGTCAAGGTCAGAAATGGAAGGGCGGGTaGAAGACAGGACCAGGAATACAGAGCTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RIQGQGQKWKGG*KTGPGIQSCPH
Trigger: GTGAGGACAGCTCTGTATTCCTGGTCCTGTCTTCAACCCGCCCTTCCATTTCTGACCTTGACCTTGAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp ACTATGCAGACCAATCGCTTTCTAGTCAGGATCCTCCTGCCCCCAGGCACCATGATGTGGTTCATCAAATaGAAGACATGTTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TMQTNRFLVRILLPPGTMMWFIK*KTCSQF
Trigger: GAACTGGGAACATGTCTTGCATTTGATGAACCACAT...CATGGTGCCTGGGGGCAGGAGGATCCTGACTAGAAAGCGATTGGTCTGCATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp AGGGCGAGGGTGGGGAAACTGCGGTCAGGATGTAAAGTGAAACGATTAATCAATGCTTGGCTTCCTTCTTaGAAACCCTGTCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: RARVGKLRSGCKVKRLINAWLPS*KPCRRR
Trigger: CCTTCTACGACAGGGTTTCCAAGAAGGAAGCCAAGC...ATTGATTAATCGTTTCACTTTACATCCTGACCGCAGTTTCCCCACCCTCGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp ACTGTGGTCAGAGGTACAGGGCCACTTACACTAAACACACACCAAAGGCATCAAGCTTGGCTTCCTTCTTaGAAACCCTGTCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: TVVRGTGPLTLNTHQRHQAWLPS*KPCRRR
Trigger: CCTTCTACGACAGGGTTTCCAAGAAGGAAGCCAAGC...TTGATGCCTTTGGTGTGTGTTTAGTGTAAGTGGCCCTGTACCTCTGACCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp CCCCCATCTTGCCTAGGCCACCTGCACTCGATCATAAGCCCTTTGGAAGCCTGCAATGTTTCCGTCTTCTaGAACTTTGATGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: PPSCLGHLHSIISPLEACNVSVF*NFDEKT
Trigger: TGTCTTTTCATCAAAGTTCCAGAAGACGGAAACATT...GCAGGCTTCCAAAGGGCTTATGATCGAGTGCAGGTGGCCTAGGCAAGATGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGGGTCCAGATAGAAATTaGCTATTGGTTTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SCPPAQVQISVEQCWHSEGPDRN*LLVFAQ
Trigger: CTGGGCAAAAACCAATAGCCAATTTCTATCTGGACC...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGTTCCAGGCTGAACAGTaGCTCGTGTTTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQFQAEQ*LVFHIC
Trigger: ACAGATGTGAAACACGAGTCACTGTTCAGCCTGGAA...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp CCTGGAGCCCGTTCCTGGGGCAGTGAACAGATCAGGTCTATGAGGTCCAACAATCTTTCAGTTCTTTGTTaGCATGTTGTTGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: PGARSWGSEQIRSMRSNNLSVLC*HVVETD
Trigger: ATCCGTTTCAACAACATGTCAACAAAGAACTGAAAG...ATTGTTGGACCTCATAGACCTGATCTGTTCACTGCCCCAGGAACGGGCTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp AGTCAAACCCTGTCTCAGACAGGCAGTCGGTCAGGAGACAGCGACGCAATGCAACTTTCAGTTCTTTGTTaGCATGTTGTTGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: SQTLSQTGSRSGDSDAMQLSVLC*HVVETD
Trigger: ATCCGTTTCAACAACATGTCAACAAAGAACTGAAAG...TTGCATTGCGTCGCTGTCTCCTGACCGACTGCCTGTCTGAGACAGGGTTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAAAGCTGCACCAACACATaGCTGATGGAGCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKSCTNT*LMEPVM
Trigger: CATGACGGGCTCCATCAGTCATGTGTTGGTGCAGCT...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp CAAGGTCAGAAATGGAAGGGCGGGTTGAAGACAGGACCAGGAATACAGAGCTGTTCAGCTCTTCTTTCTTaGAGTAATTTCGGAGACGCA +
Preference number: 4 (lower is better)
Translates to: QGQKWKGGLKTGPGIQSCSALLS*SNFGDA
Trigger: TGCGTCTCCGAAATTACTTCAAGAAAGAAGAGCTGA...ACAGCTCTGTATTCCTGGTCCTGTCTTCAACCCGCCCTTCCATTTCTGACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp AGGGCGAGGGTGGGGAAACTGCGGTCAGGATGTAAAGTGAAACGATTAATCAATAATGGAAGCGTTCTGTaGGGAGCAGAAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RARVGKLRSGCKVKRLINNGSVL*GAETAS
Trigger: AGAAGCAGTTTCTGCTCCTCACAGAACGCTTCCATT...ATTGATTAATCGTTTCACTTTACATCCTGACCGCAGTTTCCCCACCCTCGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR GCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAAACATTCTTTGGAGACTaGAGCATCTGTGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKTFFGD*SICAAR
Trigger: GCGGGCGGCACAGATGCTGCAGTCTCCAAAGAATGT...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR CCA 90 bp CCCCAGGCCTTTTGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTTGGTTTTTGCCCAGGTaGATTCTAGAGGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PQAFCHLETIGSTNLNLAWFLPR*ILEASE
Trigger: TTCAGAAGCCTCTAGAATCCACCTGGGCAAAAACCA...AGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp ACTGTGGTCAGAGGTACAGGGCCACTTACACTAAACACACACCAAAGGCATCAACTGGAAGCAGCAGCTTaGATTTCCTTCTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TVVRGTGPLTLNTHQRHQLEAAA*ISFSFS
Trigger: ACTGAAAGAGAAGGAAATTCAAGCTGCTGCTTCCAG...TTGATGCCTTTGGTGTGTGTTTAGTGTAAGTGGCCCTGTACCTCTGACCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp CATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGGAAGCCTTGCCACTCCAATCCTaGAGTGGTCATCAATATTGC +
Preference number: 4 (lower is better)
Translates to: HRGCTLNSMASTAFFMEALPLQS*SGHQYC
Trigger: GCAATATTGATGACCACTTCAGGATTGGAGTGGCAA...GGCTTCCATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp AGGGCGAGGGTGGGGAAACTGCGGTCAGGATGTAAAGTGAAACGATTAATCAATACAGCATCCCGGTACTaGGGCAAAATCTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: RARVGKLRSGCKVKRLINTASRY*GKILFM
Trigger: CATAAACAAGATTTTGCCTCAGTACCGGGATGCTGT...ATTGATTAATCGTTTCACTTTACATCCTGACCGCAGTTTCCCCACCCTCGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR GCA 90 bp AAAACCAACTTGGTGCTGAGGACAGAATCAACCTTGGGTCCCAAATGGTGTTACCACTGCCATCCTCACTaGCAGCTTCCTCATTCATTT +
Preference number: 4 (lower is better)
Translates to: KTNLVLRTESTLGPKWCYHCHPH*QLPHSF
Trigger: AAATGAATGAGGAAGCTGGCAGTGAGGATGGCAGTG...GTAACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR GCA 90 bp AAGAGATTCCAGAAAGGTCCAGCAAAAGGCAGCCAGACTTCCCTGACTCTCCCTATGTGGTTCATCAAATaGAAGACATGTTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: KRFQKGPAKGSQTSLTLPMWFIK*KTCSQF
Trigger: GAACTGGGAACATGTCTTGCATTTGATGAACCACAT...AGGGAGAGTCAGGGAAGTCTGGCTGCCTTTTGCTGGACCTTTCTGGAATCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp TCTTCAGAAAGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTGGCCTGGTGAGCCCTTaGTCCCTGAAGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: SSESLEGSQNNCLGEKEAGLVSP*SLKSSS
Trigger: AGATGATGACTTCAGGGACCAAGGGCTCACCAGGCC...AGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACTTTCTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp ACTGTGGTCAGAGGTACAGGGCCACTTACACTAAACACACACCAAAGGCATCAAACTCCAATCCTGAAGTaGTCATCAATATTGCCCACG +
Preference number: 4 (lower is better)
Translates to: TVVRGTGPLTLNTHQRHQTPILK*SSILPT
Trigger: CGTGGGCAATATTGATGACCACTTCAGGATTGGAGT...TTGATGCCTTTGGTGTGTGTTTAGTGTAAGTGGCCCTGTACCTCTGACCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp CCCCAGGCCTTTTGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTGAAGTGAGGGTACGTTaGCAGTTCATAGAATATCAG +
Preference number: 4 (lower is better)
Translates to: PQAFCHLETIGSTNLNLAEVRVR*QFIEYQ
Trigger: CTGATATTCTATGAACTGCCAACGTACCCTCACTTC...AGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR CCA 90 bp CGCTGTGATTATCTTGTTATATCGAACACTGTACATGGTGTAGCCAGCTGTGACTCTGGGCATCATACTTaGAATACAGCACGGTGCACG +
Preference number: 4 (lower is better)
Translates to: RCDYLVISNTVHGVASCDSGHHT*NTARCT
Trigger: CGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGA...GTCACAGCTGGCTACACCATGTACAGTGTTCGATATAACAAGATAATCACAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR TCA 90 bp TTTATGGAAGCCTCTGGGACCTCACAGCCACCTAGACTTTATACATCATGGCTTCGTGTTTCACATCTGTaGACTCCTCTGAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: FMEASGTSQPPRLYTSWLRVSHL*TPLRIS
Trigger: AGAAATCCTCAGAGGAGTTCACAGATGTGAAACACG...AAGCCATGATGTATAAAGTCTAGGTGGCTGTGAGGTCCCAGAGGCTTCCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp ATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGGCCACTTATTGTTTATGAAAAAGTaGAACCTGGCATCGATCACT +
Preference number: 4 (lower is better)
Translates to: IPSPTGIRTLWSEVQGHLLFMKK*NLASIT
Trigger: AGTGATCGATGCCAGGTTTCACTTTTTCATAAACAA...TAAGTGGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR TCA 90 bp AGGGCGAGGGTGGGGAAACTGCGGTCAGGATGTAAAGTGAAACGATTAATCAATTCAGCTCTTCTTTCTTaGAGTAATTTCGGAGACGCA +
Preference number: 4 (lower is better)
Translates to: RARVGKLRSGCKVKRLINSALLS*SNFGDA
Trigger: TGCGTCTCCGAAATTACTTCAAGAAAGAAGAGCTGA...ATTGATTAATCGTTTCACTTTACATCCTGACCGCAGTTTCCCCACCCTCGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp AAATTAGTTTCCAGGCTGAACAGTGACTCGTGTTTCACATCTGTGAACTCCTCTGCTTGGCTTCCTTCTTaGAAACCCTGTCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KLVSRLNSDSCFTSVNSSAWLPS*KPCRRR
Trigger: CCTTCTACGACAGGGTTTCCAAGAAGGAAGCCAAGC...AGAGGAGTTCACAGATGTGAAACACGAGTCACTGTTCAGCCTGGAAACTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195848.2
CDS-3UTR CCA 90 bp AGGACAGAATCAACCTTGGGTCCCAAATGGTGTTACTTGAACTGTAGAAATAAACCTCCTCTCCTCTGCTaGTGGCTCTCAGCATGTTAC +
Preference number: 4 (lower is better)
Translates to: RTESTLGPKWCYLNCRNKPPLLC*WLSACY
Trigger: GTAACATGCTGAGAGCCACCAGCAGAGGAGAGGAGG...TTTATTTCTACAGTTCAAGTAACACCATTTGGGACCCAAGGTTGATTCTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
3UTR CAA 72 bp GTAGAGAACTTCCCCTGCTTTCTTTCCCCAGGCCTTTaGTCATCTGGAGACCATAGGCTCAACAAATCTAAA +
Preference number: 4 (lower is better)
Translates to: VENFPCFLSPGL*SSGDHRLNKSK
Trigger: TTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGGAAAGAAAGCAGGGGAAGTTCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAACCTGAGCATTGGCTTTaGGGACATGGTTTATGGCAT +
Preference number: 4 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKPEHWL*GHGLWH
Trigger: ATGCCATAAACCATGTCCTCAAAGCCAATGCTCAGG...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp TCAGATCATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGACTCGCAGATGTGTGTaGAGTTCAGCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SDHRGCTLNSMASTAFFMTRRCV*SSALLS
Trigger: AGAAAGAAGAGCTGAACTTCACACACATCTGCGAGT...CATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATGATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR GCA 90 bp AGGACAGAATCAACCTTGGGTCCCAAATGGTGTTACTTGAACTGTAGAAATAAAGGGCGTAGAGACGGATaGTCCTCTGAAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: RTESTLGPKWCYLNCRNKGRRDG*SSEVLP
Trigger: TGGCAATACTTCAGAGGAGCATCCGTCTCTACGCCC...TTTATTTCTACAGTTCAAGTAACACCATTTGGGACCCAAGGTTGATTCTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp TCTTCAGAAAGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTGACAAATCTGCGGCTTaGCTTCCTTCTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: SSESLEGSQNNCLGEKEADKSAA*LPSWKP
Trigger: GGGTTTCCAAGAAGGAAGCCAAGCCGCAGATTTGTC...AGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACTTTCTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp TTTCATTTTCACCTGTTACACAATTCAAAAACCAACTTGGTGCTGAGGACAGAACAGGCCTCTTCAGGTTaGGAGGTCTCTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: FHFHLLHNSKTNLVLRTEQASSG*EVSPQD
Trigger: ATCCTGAGGAGAGACCTCCCAACCTGAAGAGGCCTG...TTCTGTCCTCAGCACCAAGTTGGTTTTTGAATTGTGTAACAGGTGAAAATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGGAGCTATTTGATTTTTaGGGTCCAGATAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQELFDF*GPDRNW
Trigger: CCAATTTCTATCTGGACCTCAAAAATCAAATAGCTC...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAATTGCCACTCCAATCCTaGAGTGGTCATCAATATTGC +
Preference number: 4 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKLPLQS*SGHQYC
Trigger: GCAATATTGATGACCACTTCAGGATTGGAGTGGCAA...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAATGGTTTTTGCCCAGGTaGATTCTAGAGGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKWFLPR*ILEASE
Trigger: TTCAGAAGCCTCTAGAATCCACCTGGGCAAAAACCA...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR TCA 90 bp AAAACCAACTTGGTGCTGAGGACAGAATCAACCTTGGGTCCCAAATGGTGTTACGAGCTATTTGATTTTTaGGGTCCAGATAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: KTNLVLRTESTLGPKWCYELFDF*GPDRNW
Trigger: CCAATTTCTATCTGGACCTCAAAAATCAAATAGCTC...GTAACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 72 bp TCAAAAACCAACTTGGTGCTGAGGACAGAATCAACCTaGGGTCCCAAATGGTGTTACTTGAACTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: SKTNLVLRTEST*GPKWCYLNCRN
Trigger: ATTTCTACAGTTCAAGTAACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 72 bp TTGAATTTCCTTCTCTTTCAGTTCTTTGTTGACATGTaGTTGAAACGGATCTTGGGATGGCCTCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: LNFLLFQFFVDM*LKRILGWPLGT
Trigger: TGTTCCCAGAGGCCATCCCAAGATCCGTTTCAACAACATGTCAACAAAGAACTGAAAGAGAAGGAAATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195848.2
CDS-3UTR TCA 90 bp AGGACAGAATCAACCTTGGGTCCCAAATGGTGTTACTTGAACTGTAGAAATAAACTGGAAGCAGCAGCTTaGATTTCCTTCTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: RTESTLGPKWCYLNCRNKLEAAA*ISFSFS
Trigger: ACTGAAAGAGAAGGAAATTCAAGCTGCTGCTTCCAG...TTTATTTCTACAGTTCAAGTAACACCATTTGGGACCCAAGGTTGATTCTGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp TCTTCAGAAAGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTGGTCCAGATAGAAATTaGCTATTGGTTTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSESLEGSQNNCLGEKEAGPDRN*LLVFAQ
Trigger: CTGGGCAAAAACCAATAGCCAATTTCTATCTGGACC...AGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACTTTCTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CCA 90 bp TTTCATTTTCACCTGTTACACAATTCAAAAACCAACTTGGTGCTGAGGACAGAAAAGAACAGCTCTTTCTaGAGCGGGGTAAAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: FHFHLLHNSKTNLVLRTEKNSSF*SGVKEL
Trigger: TAGCTCCTTTACCCCGCTCCAGAAAGAGCTGTTCTT...TTCTGTCCTCAGCACCAAGTTGGTTTTTGAATTGTGTAACAGGTGAAAATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
3UTR CAA 72 bp AGGACAGAATCAACCTTGGGTCCCAAATGGTGTTACTaGAACTGTAGAAATAAATGCTGCTTTATACATGAC +
Preference number: 4 (lower is better)
Translates to: RTESTLGPKWCY*NCRNKCCFIHD
Trigger: GTCATGTATAAAGCAGCATTTATTTCTACAGTTCAAGTAACACCATTTGGGACCCAAGGTTGATTCTGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AGTGGCCTAACGGGGCCCAGTGAGGTCACAGCCCCACCTAAGGAACATCTGACAGACTGGCCATTTCAGTaGCTGGGTAGCTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SGLTGPSEVTAPPKEHLTDWPFQ*LGSWRA
Trigger: AGCCCTCCAGCTACCCAGCAACTGAAATGGCCAGTC...TGTCAGATGTTCCTTAGGTGGGGCTGTGACCTCACTGGGCCCCGTTAGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AGTGGCCTAACGGGGCCCAGTGAGGTCACAGCCCCACCTAAGGAACATCTGACAAGGCCTGGTGAGCCCTaGGTCCCTGAAGTCATCATC +
Preference number: 5 (lower is better)
Translates to: SGLTGPSEVTAPPKEHLTRPGEP*VPEVII
Trigger: GATGATGACTTCAGGGACCAAGGGCTCACCAGGCCT...TGTCAGATGTTCCTTAGGTGGGGCTGTGACCTCACTGGGCCCCGTTAGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp CCCCCATCTTGCCTAGGCCACCTGCACTCGATCATAAGCCCTTTGGAAGCCTGCTCAGGCCTCTTCAGGTaGGGAGGTCTCTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: PPSCLGHLHSIISPLEACSGLFR*GGLSSG
Trigger: TCCTGAGGAGAGACCTCCCAACCTGAAGAGGCCTGA...GCAGGCTTCCAAAGGGCTTATGATCGAGTGCAGGTGGCCTAGGCAAGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS TCA 90 bp CTTCCATTCTCTGGAAGACGTGAGGGAGCTGCACCAACACATGACTaGTGGAGCCCGTCATGGGGACATTCCTCACAGCCACCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LPFSGRREGAAPTHD*WSPSWGHSSQPPGL
Trigger: AAGGCCAGGTGGCTGTGAGGAATGTCCCCATGACGGGCTCCATCAGTCATGTGTTGGTGCAGCTCCCTCACGTCTTCCAGAGAATGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp TTCCCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCTACTTGGACCAGTTATaGAGGCTCCACATTCGGACT +
Preference number: 5 (lower is better)
Translates to: FPPHASRGYGAQMATAQCYLDQL*RLHIRT
Trigger: AGTCCGAATGTGGAGCCTCAATAACTGGTCCAAGTA...GCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS TCA 90 bp GGGCACCAAAGAGCAGTGTCTGTCGGTAGTACTTGGACCAGTTATTaGGGCTCCACATTCGGACTCTCGAGAAGTCCACCCCGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: GHQRAVSVGSTWTSY*GSTFGLSRSPPRVS
Trigger: ACTCACACGGGGTGGACTTCTCGAGAGTCCGAATGTGGAGCCTCAATAACTGGTCCAAGTACTACCGACAGACACTGCTCTTTGGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS GCA 90 bp CAGCAGCCTCCGAGACAGCAGCTTCTCCCACACTGCCATCCTCACTaGCAGCTTCCTCATTCATTTCTGCATCACCTACAGCACTGTCAT +
Preference number: 5 (lower is better)
Translates to: QQPPRQQLLPHCHPH*QLPHSFLHHLQHCH
Trigger: ATGACAGTGCTGTAGGTGATGCAGAAATGAATGAGGAAGCTGGCAGTGAGGATGGCAGTGTGGGAGAAGCTGCTGTCTCGGAGGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp TCTCTCCTTGCAGAAAGAAGTGTCGAGCCCTGGAGATCCCAGACTTCTGCGTATGACTGGCCATTTCAGTaGCTGGGTAGCTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SLLAERSVEPWRSQTSAYDWPFQ*LGSWRA
Trigger: AGCCCTCCAGCTACCCAGCAACTGAAATGGCCAGTC...ATACGCAGAAGTCTGGGATCTCCAGGGCTCGACACTTCTTTCTGCAAGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp GGCACTGCACGTGTGATGGGAGCCTACAGTCCTGCCCGTGTCCTCTCACTGTCTACAATGATTTTCTTCTaGCTGTCCCCTTCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GTARVMGAYSPARVLSLSTMIFF*LSPSRR
Trigger: CCTCCTTGAAGGGGACAGCAAGAAGAAAATCATTGT...AGACAGTGAGAGGACACGGGCAGGACTGTAGGCTCCCATCACACGTGCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS TCA 90 bp ACCCCAAGTTTCTGGCTCCGGCGCCTACTGTTGTTAGCCAGCACCTaGGCATTGGCTTTGAGGACATGGTTTATGGCATGCAGGCAGTAT +
Preference number: 5 (lower is better)
Translates to: TPSFWLRRLLLLAST*ALALRTWFMACRQY
Trigger: ATACTGCCTGCATGCCATAAACCATGTCCTCAAAGCCAATGCTCAGGTGCTGGCTAACAACAGTAGGCGCCGGAGCCAGAAACTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CCA 90 bp ATGATTTTCTTCTTGCTGTCCCCTTCAAGGAGGCTGATGAAGAGCTaGACCACCCGAAGGGCAGCTTCCCGGAAGGGCACCACTATAAGT +
Preference number: 5 (lower is better)
Translates to: MIFFLLSPSRRLMKS*TTRRAASRKGTTIS
Trigger: ACTTATAGTGGTGCCCTTCCGGGAAGCTGCCCTTCGGGTGGTCCAGCTCTTCATCAGCCTCCTTGAAGGGGACAGCAAGAAGAAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AGTCAAACCCTGTCTCAGACAGGCAGTCGGTCAGGAGACAGCGACGCAATGCAATGCTTCTTCTGCTTCTaGGTCATGGTGCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: SQTLSQTGSRSGDSDAMQCFFCF*VMVLSI
Trigger: GATGCTCAGCACCATGACCAAGAAGCAGAAGAAGCA...TTGCATTGCGTCGCTGTCTCCTGACCGACTGCCTGTCTGAGACAGGGTTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp CCGCCACATGCCAGCCGAGGCTATGGTGCCCAAATGGCCACAGCCCAATGCAGACACCATCTTTTTCTTTaGAGTTGTCAGCTAGAGACA +
Preference number: 5 (lower is better)
Translates to: PPHASRGYGAQMATAQCRHHLFL*SCQLET
Trigger: TGTCTCTAGCTGACAACTCAAAAGAAAAAGATGGTG...TCTGCATTGGGCTGTGGCCATTTGGGCACCATAGCCTCGGCTGGCATGTGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp CCTGGAGCCCGTTCCTGGGGCAGTGAACAGATCAGGTCTATGAGGTCCAACAATTTGTTGAACACAGAGTaGATCTGGGCATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PGARSWGSEQIRSMRSNNLLNTE*IWASCR
Trigger: CCTGCAGGATGCCCAGATCAACTCTGTGTTCAACAA...ATTGTTGGACCTCATAGACCTGATCTGTTCACTGCCCCAGGAACGGGCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp CCCCCATCTTGCCTAGGCCACCTGCACTCGATCATAAGCCCTTTGGAAGCCTGCGCATTGATGCAGTGCTaGTTGAACACAGAGTTGATC +
Preference number: 5 (lower is better)
Translates to: PPSCLGHLHSIISPLEACALMQC*LNTELI
Trigger: GATCAACTCTGTGTTCAACAAGCACTGCATCAATGC...GCAGGCTTCCAAAGGGCTTATGATCGAGTGCAGGTGGCCTAGGCAAGATGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGCTCTGGGCATCATACTaGGAATACAGCACGGTGCAC +
Preference number: 5 (lower is better)
Translates to: SCPPAQVQISVEQCWHSELWASY*EYSTVH
Trigger: GTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAG...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS TCA 90 bp GTTATTGAGGCTCCACATTCGGACTCTCGAGAAGTCCACCCCGTGTaGGTCCAAGGGCAGCAGGTTCATGTGGTTCATCAAATGCAAGAC +
Preference number: 5 (lower is better)
Translates to: VIEAPHSDSREVHPV*VQGQQVHVVHQMQD
Trigger: GTCTTGCATTTGATGAACCACATGAACCTGCTGCCCTTGGACTCACACGGGGTGGACTTCTCGAGAGTCCGAATGTGGAGCCTCAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CCA 90 bp AATGTGAAGAATCTGAACTCTCTGGCAGCTGACAAATCTGCGGCTTaGCTTCCTTCTTGGAAACCCTGTCGTAGAAGGGGTGCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: NVKNLNSLAADKSAA*LPSWKPCRRRGAPR
Trigger: GCGAGGAGCACCCCTTCTACGACAGGGTTTCCAAGAAGGAAGCCAAGCCGCAGATTTGTCAGCTGCCAGAGAGTTCAGATTCTTCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CCA 90 bp TATTGCCCACGAACACAGCTTCATAATCCTCAGGCCTCTTCAGGTTaGGAGGTCTCTCCTCAGGATCAGATCCATACTCCCCCTGAAACC +
Preference number: 5 (lower is better)
Translates to: YCPRTQLHNPQASSG*EVSPQDQIHTPPET
Trigger: GGTTTCAGGGGGAGTATGGATCTGATCCTGAGGAGAGACCTCCCAACCTGAAGAGGCCTGAGGATTATGAAGCTGTGTTCGTGGGCAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp ACTATGCAGACCAATCGCTTTCTAGTCAGGATCCTCCTGCCCCCAGGCACCATGGCTGGAAGCAGCAGCTaGAATTTCCTTCTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: TMQTNRFLVRILLPPGTMAGSSS*NFLLFQ
Trigger: CTGAAAGAGAAGGAAATTCAAGCTGCTGCTTCCAGC...CATGGTGCCTGGGGGCAGGAGGATCCTGACTAGAAAGCGATTGGTCTGCATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp ACACCAACCACAGCCGCCAGCCTCTGGGCATCATACTTGGAATACAGCACGGTGAAGTGGTCATCAATATaGCCCACGAACACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: TPTTAASLWASYLEYSTVKWSSI*PTNTAS
Trigger: TGAAGCTGTGTTCGTGGGCAATATTGATGACCACTT...CACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGGCGGCTGTGGTTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp TTTATGGAAGCCTCTGGGACCTCACAGCCACCTAGACTTTATACATCATGGCTTAGGCCTGGTGAGCCCTaGGTCCCTGAAGTCATCATC +
Preference number: 5 (lower is better)
Translates to: FMEASGTSQPPRLYTSWLRPGEP*VPEVII
Trigger: GATGATGACTTCAGGGACCAAGGGCTCACCAGGCCT...AAGCCATGATGTATAAAGTCTAGGTGGCTGTGAGGTCCCAGAGGCTTCCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AAAACCAACTTGGTGCTGAGGACAGAATCAACCTTGGGTCCCAAATGGTGTTACTCAGGCCTCTTCAGGTaGGGAGGTCTCTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: KTNLVLRTESTLGPKWCYSGLFR*GGLSSG
Trigger: TCCTGAGGAGAGACCTCCCAACCTGAAGAGGCCTGA...GTAACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AAGAGATTCCAGAAAGGTCCAGCAAAAGGCAGCCAGACTTCCCTGACTCTCCCTTTGTTGAACACAGAGTaGATCTGGGCATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KRFQKGPAKGSQTSLTLPLLNTE*IWASCR
Trigger: CCTGCAGGATGCCCAGATCAACTCTGTGTTCAACAA...AGGGAGAGTCAGGGAAGTCTGGCTGCCTTTTGCTGGACCTTTCTGGAATCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AGCTGCCCACCAGCCCAGGTTCAGATCTCTGTAGAACAATGCTGGCATTCAGAGAAACTGCTTCTCTCCTaGCAGAAAGAAGTGTCGAGC +
Preference number: 5 (lower is better)
Translates to: SCPPAQVQISVEQCWHSEKLLLS*QKEVSS
Trigger: GCTCGACACTTCTTTCTGCAAGGAGAGAAGCAGTTT...CTCTGAATGCCAGCATTGTTCTACAGAGATCTGAACCTGGGCTGGTGGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS GCA 90 bp TCTCCTTGCAGAAAGAAGTGTCGAGCCCTGGAGATCCCAGACTTCTaGGTATACTCGCAGATGTGTGTGAAGTTCAGCTCTTCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SPCRKKCRALEIPDF*VYSQMCVKFSSSFL
Trigger: CAAGAAAGAAGAGCTGAACTTCACACACATCTGCGAGTATACGCAGAAGTCTGGGATCTCCAGGGCTCGACACTTCTTTCTGCAAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR CAA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGTGCTTCTTCTGCTTCTaGGTCATGGTGCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQCFFCF*VMVLSI
Trigger: GATGCTCAGCACCATGACCAAGAAGCAGAAGAAGCA...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp TGGGAACAACTGCCCCCGCTATCCTCTTCTAGAAAATTAGTTTCCAGGCTGAACTGCTTCTTCTGCTTCTaGGTCATGGTGCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: WEQLPPLSSSRKLVSRLNCFFCF*VMVLSI
Trigger: GATGCTCAGCACCATGACCAAGAAGCAGAAGAAGCA...GTTCAGCCTGGAAACTAATTTTCTAGAAGAGGATAGCGGGGGCAGTTGTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195848.2
CDS-3UTR CAA 90 bp ACTATGCAGACCAATCGCTTTCTAGTCAGGATCCTCCTGCCCCCAGGCACCATGCACCATCTTTTTCTTTaGAGTTGTCAGCTAGAGACA +
Preference number: 5 (lower is better)
Translates to: TMQTNRFLVRILLPPGTMHHLFL*SCQLET
Trigger: TGTCTCTAGCTGACAACTCAAAAGAAAAAGATGGTG...CATGGTGCCTGGGGGCAGGAGGATCCTGACTAGAAAGCGATTGGTCTGCATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp CCCCAGGCCTTTTGTCATCTGGAGACCATAGGCTCAACAAATCTAAACCTGGCTTACTTGGACCAGTTATaGAGGCTCCACATTCGGACT +
Preference number: 5 (lower is better)
Translates to: PQAFCHLETIGSTNLNLAYLDQL*RLHIRT
Trigger: AGTCCGAATGTGGAGCCTCAATAACTGGTCCAAGTA...AGCCAGGTTTAGATTTGTTGAGCCTATGGTCTCCAGATGACAAAAGGCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp GCTGCAAAGGAGATACTGAGAACTACCAACATAGAAGTTGGGAGAGGGGATGCGATTGGCTATTGGTTTTaGCCCAGGTGGATTCTAGAG +
Preference number: 5 (lower is better)
Translates to: AAKEILRTTNIEVGRGDAIGYWF*PRWILE
Trigger: CTCTAGAATCCACCTGGGCAAAAACCAATAGCCAAT...CGCATCCCCTCTCCCAACTTCTATGTTGGTAGTTCTCAGTATCTCCTTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AAAACCAACTTGGTGCTGAGGACAGAATCAACCTTGGGTCCCAAATGGTGTTACGCTGGAAGCAGCAGCTaGAATTTCCTTCTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: KTNLVLRTESTLGPKWCYAGSSS*NFLLFQ
Trigger: CTGAAAGAGAAGGAAATTCAAGCTGCTGCTTCCAGC...GTAACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp GTGGGCTGCAAAGGAGATACTGAGAACTACCAACATAGAAGTTGGGAGAGGGGACCGTCTTCTGGAACTTaGATGAAAAGACAAGATGTC +
Preference number: 5 (lower is better)
Translates to: VGCKGDTENYQHRSWERGPSSGT*MKRQDV
Trigger: GACATCTTGTCTTTTCATCAAAGTTCCAGAAGACGG...TCCCCTCTCCCAACTTCTATGTTGGTAGTTCTCAGTATCTCCTTTGCAGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGACAATGATTTTCTTCTaGCTGTCCCCTTCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQTMIFF*LSPSRR
Trigger: CCTCCTTGAAGGGGACAGCAAGAAGAAAATCATTGT...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp CATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGGAAGCCGCATTGATGCAGTGCTaGTTGAACACAGAGTTGATC +
Preference number: 5 (lower is better)
Translates to: HRGCTLNSMASTAFFMEAALMQC*LNTELI
Trigger: GATCAACTCTGTGTTCAACAAGCACTGCATCAATGC...GGCTTCCATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp TCTTACATGATCCCAAGCCCCACAGGAATAAGAACACTGTGGTCAGAGGTACAGCCGTCTTCTGGAACTTaGATGAAAAGACAAGATGTC +
Preference number: 5 (lower is better)
Translates to: SYMIPSPTGIRTLWSEVQPSSGT*MKRQDV
Trigger: GACATCTTGTCTTTTCATCAAAGTTCCAGAAGACGG...CTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATCATGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp CATAGAGGATGCACCCTGAACAGTATGGCTTCCACAGCATTCTTTATGGAAGCCGATAGAAATTGGCTATaGGTTTTTGCCCAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: HRGCTLNSMASTAFFMEADRNWL*VFAQVD
Trigger: ATCCACCTGGGCAAAAACCAATAGCCAATTTCTATC...GGCTTCCATAAAGAATGCTGTGGAAGCCATACTGTTCAGGGTGCATCCTCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AAAACCAACTTGGTGCTGAGGACAGAATCAACCTTGGGTCCCAAATGGTGTTACAAGTGGTCATCAATATaGCCCACGAACACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: KTNLVLRTESTLGPKWCYKWSSI*PTNTAS
Trigger: TGAAGCTGTGTTCGTGGGCAATATTGATGACCACTT...GTAACACCATTTGGGACCCAAGGTTGATTCTGTCCTCAGCACCAAGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAAAGAGGTGGACATTCTTaGGAGACTGCAGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKRGGHS*ETAASV
Trigger: CACAGATGCTGCAGTCTCCAAAGAATGTCCACCTCT...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS-3UTR CAA 90 bp CGCTGTGATTATCTTGTTATATCGAACACTGTACATGGTGTAGCCAGCTGTGACGATAGAAATTGGCTATaGGTTTTTGCCCAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: RCDYLVISNTVHGVASCDDRNWL*VFAQVD
Trigger: ATCCACCTGGGCAAAAACCAATAGCCAATTTCTATC...GTCACAGCTGGCTACACCATGTACAGTGTTCGATATAACAAGATAATCACAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp TCTTCAGAAAGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTATTGGCTATTGGTTTTaGCCCAGGTGGATTCTAGAG +
Preference number: 5 (lower is better)
Translates to: SSESLEGSQNNCLGEKEAIGYWF*PRWILE
Trigger: CTCTAGAATCCACCTGGGCAAAAACCAATAGCCAAT...AGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACTTTCTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS-3UTR CAA 90 bp AGTCTTGAAGGAAGTCAGAATAATTGCCTGGGAGAAAAAGAGGCTCACTGGAAAAGAAGTGAGGGTACGTaGGCAGTTCATAGAATATCA +
Preference number: 5 (lower is better)
Translates to: SLEGSQNNCLGEKEAHWKRSEGT*AVHRIS
Trigger: TGATATTCTATGAACTGCCAACGTACCCTCACTTCT...TTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCCTTCAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS GCA 90 bp GAAACATTCTTTAATGTAGCAAGCAGTCTGTGGTACCCTGAAACGTaGTCTTGTTCACTCTCTGATTCACTTTCAGAATGTGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: ETFFNVASSLWYPET*SCSLSDSLSECEES
Trigger: AGATTCTTCACATTCTGAAAGTGAATCAGAGAGTGAACAAGAGCACGTTTCAGGGTACCACAGACTGCTTGCTACATTAAAGAATGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CCA 90 bp AACTTTAGGTCAATATCCTTTGGAGGTTTAAATGTTTCCGTCTTCTaGAACTTTGATGAAAAGACAAGATGTCCCAGGACTGGCCATTTC +
Preference number: 5 (lower is better)
Translates to: NFRSISFGGLNVSVF*NFDEKTRCPRTGHF
Trigger: GAAATGGCCAGTCCTGGGACATCTTGTCTTTTCATCAAAGTTCCAGAAGACGGAAACATTTAAACCTCCAAAGGATATTGACCTAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CAA 90 bp AAGGGGTGCTCCTCGCCGAAGTCGCGGAGGTGCTTCTTCTGCTTCTaGGTCATGGTGCTGAGCATCTGGCTGCGGCCCCGGTTCCGGCGT +
Preference number: 6 (lower is better)
Translates to: KGCSSPKSRRCFFCF*VMVLSIWLRPRFRR
Trigger: ACGCCGGAACCGGGGCCGCAGCCAGATGCTCAGCACCATGACCAAGAAGCAGAAGAAGCACCTCCGCGACTTCGGCGAGGAGCACCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
ENSMUST00000195848.2
CDS CAA 72 bp TCCTCGCCGAAGTCGCGGAGGTGCTTCTTCTGCTTCTaGGTCATGGTGCTGAGCATCTGGCTGCGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: SSPKSRRCFFCF*VMVLSIWLRPR
Trigger: CCGGGGCCGCAGCCAGATGCTCAGCACCATGACCAAGAAGCAGAAGAAGCACCTCCGCGACTTCGGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
ENSMUST00000195848.2
CDS GCA 72 bp GGGTGCTCCTCGCCGAAGTCGCGGAGGTGCTTCTTCTaGTTCTTGGTCATGGTGCTGAGCATCTGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: GCSSPKSRRCFF*FLVMVLSIWLR
Trigger: CCGCAGCCAGATGCTCAGCACCATGACCAAGAAGCAGAAGAAGCACCTCCGCGACTTCGGCGAGGAGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
ENSMUST00000195848.2
CDS CCA 72 bp TTCTTGCTGTCCCCTTCAAGGAGGCTGATGAAGAGCTaGACCACCCGAAGGGCAGCTTCCCGGAAGGGCACC +
Preference number: 6 (lower is better)
Translates to: FLLSPSRRLMKS*TTRRAASRKGT
Trigger: GGTGCCCTTCCGGGAAGCTGCCCTTCGGGTGGTCCAGCTCTTCATCAGCCTCCTTGAAGGGGACAGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS TCA 72 bp TCTGGAAGACGTGAGGGAGCTGCACCAACACATGACTaGTGGAGCCCGTCATGGGGACATTCCTCACAGCCA +
Preference number: 6 (lower is better)
Translates to: SGRREGAAPTHD*WSPSWGHSSQP
Trigger: TGGCTGTGAGGAATGTCCCCATGACGGGCTCCATCAGTCATGTGTTGGTGCAGCTCCCTCACGTCTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CAA 72 bp GGGCACCACTATAAGTACCTTAGGCCTGGTGAGCCCTaGGTCCCTGAAGTCATCATCTTCACCCACCCCAAG +
Preference number: 6 (lower is better)
Translates to: GHHYKYLRPGEP*VPEVIIFTHPK
Trigger: CTTGGGGTGGGTGAAGATGATGACTTCAGGGACCAAGGGCTCACCAGGCCTAAGGTACTTATAGTGGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS TCA 72 bp AGAGCAGTGTCTGTCGGTAGTACTTGGACCAGTTATTaGGGCTCCACATTCGGACTCTCGAGAAGTCCACCC +
Preference number: 6 (lower is better)
Translates to: RAVSVGSTWTSY*GSTFGLSRSPP
Trigger: GGGTGGACTTCTCGAGAGTCCGAATGTGGAGCCTCAATAACTGGTCCAAGTACTACCGACAGACACTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CCA 72 bp CGAACACAGCTTCATAATCCTCAGGCCTCTTCAGGTTaGGAGGTCTCTCCTCAGGATCAGATCCATACTCCC +
Preference number: 6 (lower is better)
Translates to: RTQLHNPQASSG*EVSPQDQIHTP
Trigger: GGGAGTATGGATCTGATCCTGAGGAGAGACCTCCCAACCTGAAGAGGCCTGAGGATTATGAAGCTGTGTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CCA 72 bp GCATTGATGCAGTGCTTGTTGAACACAGAGTTGATCTaGGCATCCTGCAGGGCACCAAAGAGCAGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: ALMQCLLNTELI*ASCRAPKSSVC
Trigger: ACAGACACTGCTCTTTGGTGCCCTGCAGGATGCCCAGATCAACTCTGTGTTCAACAAGCACTGCATCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS GCA 72 bp ACTGCCATCCTCACTGCCAGCTTCCTCATTCATTTCTaGATCACCTACAGCACTGTCATCTTCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: TAILTASFLIHF*ITYSTVIFLFL
Trigger: GAGGAAGAGGAAGATGACAGTGCTGTAGGTGATGCAGAAATGAATGAGGAAGCTGGCAGTGAGGATGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS GCA 72 bp AGAAAGAAGTGTCGAGCCCTGGAGATCCCAGACTTCTaGGTATACTCGCAGATGTGTGTGAAGTTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: RKKCRALEIPDF*VYSQMCVKFSS
Trigger: AGAGCTGAACTTCACACACATCTGCGAGTATACGCAGAAGTCTGGGATCTCCAGGGCTCGACACTTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085555.7
CDS CAA 90 bp AGGATTTCTGTGATACACCAGGTGGCTCTTCACCATCTTTTTCTTTaGAGTTGTCAGCTAGAGACATATGTTCCTGTGTCTCAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: RISVIHQVALHHLFL*SCQLETYVPVSQQP
Trigger: AGGCTGCTGAGACACAGGAACATATGTCTCTAGCTGACAACTCAAAAGAAAAAGATGGTGAAGAGCCACCTGGTGTATCACAGAAATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CAA 72 bp ATTTTTGAGGTCCAGATAGAAATTGGCTATTGGTTTTaGCCCAGGTGGATTCTAGAGGCTTCTGAAGATGAA +
Preference number: 6 (lower is better)
Translates to: IFEVQIEIGYWF*PRWILEASEDE
Trigger: TTCATCTTCAGAAGCCTCTAGAATCCACCTGGGCAAAAACCAATAGCCAATTTCTATCTGGACCTCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CCA 72 bp TCAATATCCTTTGGAGGTTTAAATGTTTCCGTCTTCTaGAACTTTGATGAAAAGACAAGATGTCCCAGGACT +
Preference number: 6 (lower is better)
Translates to: SISFGGLNVSVF*NFDEKTRCPRT
Trigger: AGTCCTGGGACATCTTGTCTTTTCATCAAAGTTCCAGAAGACGGAAACATTTAAACCTCCAAAGGATATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6
CDS CAA 90 bp AGCTATTTGATTTTTGAGGTCCAGATAGAAATTGGCTATTGGTTTTaGCCCAGGTGGATTCTAGAGGCTTCTGAAGATGAAGTAACTTTA +
Preference number: 6 (lower is better)
Translates to: SYLIFEVQIEIGYWF*PRWILEASEDEVTL
Trigger: TAAAGTTACTTCATCTTCAGAAGCCTCTAGAATCCACCTGGGCAAAAACCAATAGCCAATTTCTATCTGGACCTCAAAAATCAAATAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085555.7
ENSMUST00000195291.6