Pregenerated sensors for UTP23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022313Ensembl transcript IDs: ENSMUST00000059599.10, ENSMUST00000136129.2, ENSMUST00000137116.3, ENSMUST00000161651.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGAGCAAGCCAGGGGAGGCAAGTCAGTAAAGAACATCCCTCCATaGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: VEQARGGKSVKNIPP*PLHQLLLPDLLEFQ Trigger: CTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGACTTGCCTCCCCTGGCTTGCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR GCA 90 bp | GTCTTCCAGAGTATCCCCAGCACACATCAGCCTTCTGCACCCTGCTaGTCAGAAGACACTTTCAGGGTGGATCTGTTCCGAATCCGTTTC | + |
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Preference number: 1 (lower is better) Translates to: VFQSIPSTHQPSAPC*SEDTFRVDLFRIRF Trigger: GAAACGGATTCGGAACAGATCCACCCTGAAAGTGTCTTCTGAGCAGCAGGGTGCAGAAGGCTGATGTGTGCTGGGGATACTCTGGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR GCA 90 bp | ACTGTCTTCCAGAGTATCCCCAGCACACATCAGCCTTCTGCACCCTaGTGCTCAGAAGACACTTTCAGGGTGGATCTGTTCCGAATCCGT | + |
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Preference number: 1 (lower is better) Translates to: TVFQSIPSTHQPSAP*CSEDTFRVDLFRIR Trigger: ACGGATTCGGAACAGATCCACCCTGAAAGTGTCTTCTGAGCAGCAGGGTGCAGAAGGCTGATGTGTGCTGGGGATACTCTGGAAGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR GCA 90 bp | AGTTTCCACTGTCTTCCAGAGTATCCCCAGCACACATCAGCCTTCTaGACCCTGCTGCTCAGAAGACACTTTCAGGGTGGATCTGTTCCG | + |
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Preference number: 1 (lower is better) Translates to: SFHCLPEYPQHTSAF*TLLLRRHFQGGSVP Trigger: CGGAACAGATCCACCCTGAAAGTGTCTTCTGAGCAGCAGGGTGCAGAAGGCTGATGTGTGCTGGGGATACTCTGGAAGACAGTGGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR TCA 90 bp | TGCTGGGGTGATGCCTCAGTCAGGACCTTACCTGCCGTACTACTGTaGGGAGTTGGGTTCAGATCCTCAGACTCATACAGAAAGCCACAT | + |
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Preference number: 1 (lower is better) Translates to: CWGDASVRTLPAVLL*GVGFRSSDSYRKPH Trigger: ATGTGGCTTTCTGTATGAGTCTGAGGATCTGAACCCAACTCCTCACAGTAGTACGGCAGGTAAGGTCCTGACTGAGGCATCACCCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 90 bp | GCAGGCGTCTTTACCCACTGTACCGGCTGGTTTTGTGTGTCAACTTaGCACAGGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: AGVFTHCTGWFCVST*HRLELSQRKELQLR Trigger: CCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTCAAGTTGACACACAAAACCAGCCGGTACAGTGGGTAAAGACGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR GCA 90 bp | GTTCAGATCCTCAGACTCATACAGAAAGCCACATTCAACAGTGAATaGTGTCAATCCCAGCACCAGAAAGGAGACAGGAGGATCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VQILRLIQKATFNSE*CQSQHQKGDRRISG Trigger: CCCAGAGATCCTCCTGTCTCCTTTCTGGTGCTGGGATTGACAGCATTCACTGTTGAATGTGGCTTTCTGTATGAGTCTGAGGATCTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 90 bp | TTGGGTTCAGATCCTCAGACTCATACAGAAAGCCACATTCAACAGTaGATGCTGTCAATCCCAGCACCAGAAAGGAGACAGGAGGATCTC | + |
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Preference number: 1 (lower is better) Translates to: LGSDPQTHTESHIQQ*MLSIPAPERRQEDL Trigger: GAGATCCTCCTGTCTCCTTTCTGGTGCTGGGATTGACAGCATTCACTGTTGAATGTGGCTTTCTGTATGAGTCTGAGGATCTGAACCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 90 bp | CAACTTGACACAGGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTaGGGAAATGCCTCCAAGAGATCCAACTGCAAGGCATTTTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: QLDTGWSYHRERSFS*GNASKRSNCKAFSQ Trigger: TTGAGAAAATGCCTTGCAGTTGGATCTCTTGGAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTCAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR CAA 90 bp | AGCAGGCGTCTTTACCCACTGTACCGGCTGGTTTTGTGTGTCAACTaGACACAGGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: SRRLYPLYRLVLCVN*TQAGVITEKGASVE Trigger: CTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTCAAGTTGACACACAAAACCAGCCGGTACAGTGGGTAAAGACGCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR-3UTR GCA 90 bp | TTTAAAATTATGTGGTGCTGGGGTGATGCCTCAGTCAGGACCTTACCTGCCGTAGCTCACAAACACTACTaGACCTACACACACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FKIMWCWGDASVRTLPAVAHKHY*TYTHRE Trigger: CTCTCTGTGTGTGTAGGTGCAGTAGTGTTTGTGAGC...TACGGCAGGTAAGGTCCTGACTGAGGCATCACCCCAGCACCACATAATTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTCAGAAGACACTTTCAGGGTGGATCTGTTCCGAATCCGTTTCCTTTTCCTTCAAAGGCCACTGTTCTaGGAGAAGGCTTGTCCAACA | + |
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Preference number: 2 (lower is better) Translates to: CSEDTFRVDLFRIRFLFLQRPLF*EKACPT Trigger: TGTTGGACAAGCCTTCTCCCAGAACAGTGGCCTTTG...AAGGAAAAGGAAACGGATTCGGAACAGATCCACCCTGAAAGTGTCTTCTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR-3UTR CCA 90 bp | GCCACATTCAACAGTGAATGCTGTCAATCCCAGCACCAGAAAGGAGACAGGAGGCCAGGACCACTTAACTaGCAAGTTATTGATTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: ATFNSECCQSQHQKGDRRPGPLN*QVIDSV Trigger: CACTGAATCAATAACTTGCCAGTTAAGTGGTCCTGG...CCTCCTGTCTCCTTTCTGGTGCTGGGATTGACAGCATTCACTGTTGAATGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTCCAGAGTATCCCCAGCACACATCAGCCTTCTGCACCCTGCTGCTCAGAAGGTTCCGCACCAGGCCTaGCTCCTCCTTCAGTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: SSRVSPAHISLLHPAAQKVPHQA*LLLQLL Trigger: AAGCAACTGAAGGAGGAGCAAGGCCTGGTGCGGAAC...CTTCTGAGCAGCAGGGTGCAGAAGGCTGATGTGTGCTGGGGATACTCTGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR GCA 72 bp | TCCGGGTTCCGCACCAGGCCTTGCTCCTCCTTCAGTTaGTTGATACTCTGTTTCTCGTGCACTGAGACCAGC | + |
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Preference number: 3 (lower is better) Translates to: SGFRTRPCSSFS*LILCFSCTETS Trigger: GCTGGTCTCAGTGCACGAGAAACAGAGTATCAAGCAACTGAAGGAGGAGCAAGGCCTGGTGCGGAACCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR TCA 72 bp | GGTTCCGCACCAGGCCTTGCTCCTCCTTCAGTTGCTTaGTACTCTGTTTCTCGTGCACTGAGACCAGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: GSAPGLAPPSVA*YSVSRALRPAD Trigger: GTCAGCTGGTCTCAGTGCACGAGAAACAGAGTATCAAGCAACTGAAGGAGGAGCAAGGCCTGGTGCGGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR CCA 72 bp | TCAATCCCAGCACCAGAAAGGAGACAGGAGGATCTCTaGGGCTTAACGGCCATCCAGGACCACTTAACTGGC | + |
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Preference number: 3 (lower is better) Translates to: SIPAPERRQEDL*GLTAIQDHLTG Trigger: GCCAGTTAAGTGGTCCTGGATGGCCGTTAAGCCCCAGAGATCCTCCTGTCTCCTTTCTGGTGCTGGGATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR CCA 72 bp | CAAGGGGGAAAGGCCCCTTGTGGGTTGTGCCATCCCTaGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: QGGKAPCGLCHP*AGSLGFYKRAS Trigger: ACTTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACAACCCACAAGGGGCCTTTCCCCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR GCA 72 bp | TGTCTTCCAGAGTATCCCCAGCACACATCAGCCTTCTaGACCCTGCTGCTCAGAAGACACTTTCAGGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: CLPEYPQHTSAF*TLLLRRHFQGG Trigger: TCCACCCTGAAAGTGTCTTCTGAGCAGCAGGGTGCAGAAGGCTGATGTGTGCTGGGGATACTCTGGAAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR GCA 72 bp | ATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTTGTaGCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAG | + |
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Preference number: 3 (lower is better) Translates to: ISDQGGKAPCGL*HPWAGSLGFYK Trigger: CTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACAACCCACAAGGGGCCTTTCCCCCTTGATCACTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 72 bp | GATGCCTCAGTCAGGACCTTACCTGCCGTACTACTGTaGGGAGTTGGGTTCAGATCCTCAGACTCATACAGA | + |
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Preference number: 3 (lower is better) Translates to: DASVRTLPAVLL*GVGFRSSDSYR Trigger: TCTGTATGAGTCTGAGGATCTGAACCCAACTCCTCACAGTAGTACGGCAGGTAAGGTCCTGACTGAGGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR CCA 72 bp | GTTTTGCGTGGAGGTGTGGAGGTAAGAAGACAATTTTaGGAGTCAGGTCTGGTCTCTAGGTCTCAGGGACGA | + |
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Preference number: 3 (lower is better) Translates to: VLRGGVEVRRQF*ESGLVSRSQGR Trigger: TCGTCCCTGAGACCTAGAGACCAGACCTGACTCCCAAAATTGTCTTCTTACCTCCACACCTCCACGCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCTTTTTCTTCAGGCAGCTGAGAGGATTGGGGCCGCCCACCTTCTTCTTTTCCTCCTTCAGTTGCTaGATACTCTGTTTCTCGTGC | + |
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Preference number: 3 (lower is better) Translates to: FFFFFRQLRGLGPPTFFFSSFSC*ILCFSC Trigger: GCACGAGAAACAGAGTATCAAGCAACTGAAGGAGGA...AAAGAAGAAGGTGGGCGGCCCCAATCCTCTCAGCTGCCTGAAGAAAAAGAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR-3UTR CAA 90 bp | CCACTGTACCGGCTGGTTTTGTGTGTCAACTTGACACAGGCTGGAGTTATCACAAGAAAGGAGCTTCAGTaGAGGAAATGCCTCCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: PLYRLVLCVNLTQAGVITRKELQ*RKCLQE Trigger: CTCTTGGAGGCATTTCCTCAACTGAAGCTCCTTTCT...TGTGATAACTCCAGCCTGTGTCAAGTTGACACACAAAACCAGCCGGTACAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 72 bp | TGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAAGTTaGGCAAGCCAGGGGAGGCAAGTCAGTAAAGAACAT | + |
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Preference number: 3 (lower is better) Translates to: WAGSLGFYKRAS*ASQGRQVSKEH Trigger: ATGTTCTTTACTGACTTGCCTCCCCTGGCTTGCTCAACTTGCTCTCTTATAGAACCCAAGACTACCAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 72 bp | ACAGGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTaGGGAAATGCCTCCAAGAGATCCAACTGCAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: TGWSYHRERSFS*GNASKRSNCKA Trigger: TGCCTTGCAGTTGGATCTCTTGGAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR GCA 72 bp | CTCAGACTCATACAGAAAGCCACATTCAACAGTGAATaGTGTCAATCCCAGCACCAGAAAGGAGACAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LRLIQKATFNSE*CQSQHQKGDRR Trigger: CCTCCTGTCTCCTTTCTGGTGCTGGGATTGACAGCATTCACTGTTGAATGTGGCTTTCTGTATGAGTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 72 bp | GATCCTCAGACTCATACAGAAAGCCACATTCAACAGTaGATGCTGTCAATCCCAGCACCAGAAAGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: DPQTHTESHIQQ*MLSIPAPERRQ Trigger: CTGTCTCCTTTCTGGTGCTGGGATTGACAGCATTCACTGTTGAATGTGGCTTTCTGTATGAGTCTGAGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 72 bp | TTTACCCACTGTACCGGCTGGTTTTGTGTGTCAACTTaGCACAGGCTGGAGTTATCACAGAGAAAGGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: FTHCTGWFCVST*HRLELSQRKEL Trigger: AAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTCAAGTTGACACACAAAACCAGCCGGTACAGTGGGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 72 bp | ATGACAGTTCTCCAGAGGACAGTACCTAACAATATCTaGGTAGCATGCTCAGCAGAAAGCACAGCCACACTG | + |
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Preference number: 3 (lower is better) Translates to: MTVLQRTVPNNI*VACSAESTATL Trigger: CAGTGTGGCTGTGCTTTCTGCTGAGCATGCTACTCAGATATTGTTAGGTACTGTCCTCTGGAGAACTGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR TCA 72 bp | GTTCTGGGAGAAGGCTTGTCCAACACTATAGTGTTCTaGATAATGAACATGAGAGGAATTCCAGGAGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: VLGEGLSNTIVF*IMNMRGIPGVL Trigger: GAGGACTCCTGGAATTCCTCTCATGTTCATTATTCAGAACACTATAGTGTTGGACAAGCCTTCTCCCAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| 3UTR GCA 72 bp | CACACTGGAGGACATCAGGAGAACCCAGCTAAGTATTaGATGGTAAAAATGACTTCAAACTATTGGATGAGT | + |
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Preference number: 3 (lower is better) Translates to: HTGGHQENPAKY*MVKMTSNYWMS Trigger: ACTCATCCAATAGTTTGAAGTCATTTTTACCATGCAATACTTAGCTGGGTTCTCCTGATGTCCTCCAGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR CCA 72 bp | GCTAAGTATTGCATGGTAAAAATGACTTCAAACTATTaGATGAGTGTAACTATATGCCATGTTACTGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: AKYCMVKMTSNY*MSVTICHVTGQ Trigger: TTGCCCAGTAACATGGCATATAGTTACACTCATCCAATAGTTTGAAGTCATTTTTACCATGCAATACTTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | GGACCTTACCTGCCGTACTACTGTGAGGAGTTGGGTTCAGATCCTCAGACTCATAGCTGGTCCCGCAGCTaGATGCGACCCCGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GPYLPYYCEELGSDPQTHSWSRS*MRPRSA Trigger: GGCGCTGCGGGGTCGCATCCAGCTGCGGGACCAGCT...ATGAGTCTGAGGATCTGAACCCAACTCCTCACAGTAGTACGGCAGGTAAGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR GCA 90 bp | GGCCACTGTTCTGGGAGAAGGCTTGTCCAACACTATAGTGTTCTGAATAATGAAGGTCCCGCAGCTGGATaGGACCCCGCAGCGCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: GHCSGRRLVQHYSVLNNEGPAAG*DPAAPP Trigger: AGGCGGCGCTGCGGGGTCGCATCCAGCTGCGGGACC...TTCATTATTCAGAACACTATAGTGTTGGACAAGCCTTCTCCCAGAACAGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| CDS-3UTR CCA 90 bp | TTTGTGTGTCAACTTGACACAGGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTCCCCGCAGCGCCGCCTaGCAGAAAGTGCCATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FVCQLDTGWSYHRERSFSPRSAA*QKVPSR Trigger: TCTGGATGGCACTTTCTGCCAGGCGGCGCTGCGGGG...ACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTCAAGTTGACACACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR GCA 90 bp | TATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTGGTCCCGCAGCTGGATaGGACCCCGCAGCGCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: YTHFHSLNRKLVSTVFQSGPAAG*DPAAPP Trigger: AGGCGGCGCTGCGGGGTCGCATCCAGCTGCGGGACC...ACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTAGCTGGTCCCGCAGCTaGATGCGACCCCGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: PLVYTFSQFEQEVSFHCLSWSRS*MRPRSA Trigger: GGCGCTGCGGGGTCGCATCCAGCTGCGGGACCAGCT...AAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 |
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| CDS-3UTR GCA 90 bp | TTTAAAATTATGTGGTGCTGGGGTGATGCCTCAGTCAGGACCTTACCTGCCGTACCGCCTGGCAGAAAGTaGCATCCAGAAGGATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: FKIMWCWGDASVRTLPAVPPGRK*HPEGSG Trigger: ACCAGATCCTTCTGGATGGCACTTTCTGCCAGGCGG...TACGGCAGGTAAGGTCCTGACTGAGGCATCACCCCAGCACCACATAATTTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR TCA 90 bp | CTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCTGCACTGAGACCAGCTaGCCCGCCTCGACCGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LWYTHFHSLNRKLVSTVFCTETS*PASTAF Trigger: GAAGGCGGTCGAGGCGGGTCAGCTGGTCTCAGTGCA...GAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCCCGCAGCGCCGCCTaGCAGAAAGTGCCATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PLVYTFSQFEQEVSFHCLPRSAA*QKVPSR Trigger: TCTGGATGGCACTTTCTGCCAGGCGGCGCTGCGGGG...AAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| 3UTR CAA 72 bp | CACAGGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTaGAGGAAATGCCTCCAAGAGATCCAACTGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: HRLELSQRKELQ*RKCLQEIQLQG Trigger: GCCTTGCAGTTGGATCTCTTGGAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | TATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTCCCCGCAGCGCCGCCTaGCAGAAAGTGCCATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YTHFHSLNRKLVSTVFQSPRSAA*QKVPSR Trigger: TCTGGATGGCACTTTCTGCCAGGCGGCGCTGCGGGG...ACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR TCA 90 bp | TTTAAAATTATGTGGTGCTGGGGTGATGCCTCAGTCAGGACCTTACCTGCCGTACACTCACTGGGCTCTTaGAATGAGGACAGTTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: FKIMWCWGDASVRTLPAVHSLGS*NEDSFE Trigger: TTCGAAACTGTCCTCATTTCAAGAGCCCAGTGAGTG...TACGGCAGGTAAGGTCCTGACTGAGGCATCACCCCAGCACCACATAATTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR TCA 90 bp | GGACCTTACCTGCCGTACTACTGTGAGGAGTTGGGTTCAGATCCTCAGACTCATTTCCAGGAGTCCTCTTaGCTTTCACAGATAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: GPYLPYYCEELGSDPQTHFQESS*LSQISS Trigger: AGAACTTATCTGTGAAAGTCAAGAGGACTCCTGGAA...ATGAGTCTGAGGATCTGAACCCAACTCCTCACAGTAGTACGGCAGGTAAGGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | TTGTGTGTCAACTTGACACAGGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTCAAAGGCCACTGTTCTaGGAGAAGGCTTGTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: LCVNLTQAGVITEKGASVQRPLF*EKACPT Trigger: TGTTGGACAAGCCTTCTCCCAGAACAGTGGCCTTTG...AACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTCAAGTTGACACACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR GCA 90 bp | GTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGCCGCCTGGCAGAAAGTaGCATCCAGAAGGATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VYTFSQFEQEVSFHCLPEPPGRK*HPEGSG Trigger: ACCAGATCCTTCTGGATGGCACTTTCTGCCAGGCGG...CTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR GCA 90 bp | TACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTATCCGCCTGGCAGAAAGTaGCATCCAGAAGGATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: YTFSQFEQEVSFHCLPEYPPGRK*HPEGSG Trigger: ACCAGATCCTTCTGGATGGCACTTTCTGCCAGGCGG...ATACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTACTGGGCTCTTGAAATaGGGACAGTTTCGAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVYTFSQFEQEVSFHCLTGLLK*GQFRTW Trigger: CCAGGTTCGAAACTGTCCTCATTTCAAGAGCCCAGT...AAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR GCA 90 bp | TACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTATCAGCCTTCTGCACCCTaGTGCTCAGAAGACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTFSQFEQEVSFHCLPEYQPSAP*CSEDTF Trigger: GAAAGTGTCTTCTGAGCAGCAGGGTGCAGAAGGCTG...ATACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | ACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTATCCAAAGGCCACTGTTCTaGGAGAAGGCTTGTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: THFHSLNRKLVSTVFQSIQRPLF*EKACPT Trigger: TGTTGGACAAGCCTTCTCCCAGAACAGTGGCCTTTG...GATACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 |
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| 3UTR CAA 72 bp | GGAAGTGTAAGCAGAATAAACCCTTTCCTCCCCAACTaGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSRINPFLPN*LLGHDVCAGIE Trigger: TTCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCTGCTTACACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR GCA 90 bp | ACTGACAAACCCAACTATTCTTTACTTTTGGCAAAAGTGTATGTAGCAGTAGTACAGCCTTCTGCACCCTaGTGCTCAGAAGACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDKPNYSLLLAKVYVAVVQPSAP*CSEDTF Trigger: GAAAGTGTCTTCTGAGCAGCAGGGTGCAGAAGGCTG...TACTACTGCTACATACACTTTTGCCAAAAGTAAAGAATAGTTGGGTTTGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTGGACAGTTTCGAACCTaGCATTTCTGTGCAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLVYTFSQFEQEVSFHCLGQFRT*HFCAIS Trigger: ACTGATTGCACAGAAATGCCAGGTTCGAAACTGTCC...AAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | TATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTTTCAGACCCACTCACTaGGCTCTTGAAATGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YTHFHSLNRKLVSTVFQSFRPTH*ALEMRT Trigger: TGTCCTCATTTCAAGAGCCCAGTGAGTGGGTCTGAA...ACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR TCA 90 bp | ACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTATCTTCCAGGAGTCCTCTTaGCTTTCACAGATAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THFHSLNRKLVSTVFQSIFQESS*LSQISS Trigger: AGAACTTATCTGTGAAAGTCAAGAGGACTCCTGGAA...GATACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | TGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTTCTGATCCTGTGTaGCCACAAAATAATGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: WYTHFHSLNRKLVSTVFQSSDPV*PQNNDE Trigger: CTCATCATTATTTTGTGGCCACACAGGATCAGAACT...CTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 |
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| CDS-3UTR CCA 90 bp | CTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCAGTTCTGATCCTGTGTaGCCACAAAATAATGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWYTHFHSLNRKLVSTVFSSDPV*PQNNDE Trigger: CTCATCATTATTTTGTGGCCACACAGGATCAGAACT...GAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 |
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| CDS-3UTR GCA 90 bp | GACAAACCCAACTATTCTTTACTTTTGGCAAAAGTGTATGTAGCAGTAGTAGTTAACCTGGCATTTCTGTaGAATCAGTTTTGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: DKPNYSLLLAKVYVAVVVNLAFL*NQFCSI Trigger: TATGGAGCAAAACTGATTGCACAGAAATGCCAGGTT...AACTACTACTGCTACATACACTTTTGCCAAAAGTAAAGAATAGTTGGGTTTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| 3UTR CAA 72 bp | AAAGGCAGTAGATACTCTCAAATATGGATTTCTTACTaGCTTTGTGCTTTATTACAGCAAGGGAATACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGSRYSQIWISY*LCALLQQGNTR Trigger: TCTTGTATTCCCTTGCTGTAATAAAGCACAAAGCAAGTAAGAAATCCATATTTGAGAGTATCTACTGCCTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS GCA 90 bp | GGTCCCGCAGCTGGATGCGACCCCGCAGCGCCGCCTGGCAGAAAGTaGCATCCAGAAGGATCTGGTAGGGCTCGCGGACTCCGAAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPAAGCDPAAPPGRK*HPEGSGRARGLRNC Trigger: ACAATTTCGGAGTCCGCGAGCCCTACCAGATCCTTCTGGATGGCACTTTCTGCCAGGCGGCGCTGCGGGGTCGCATCCAGCTGCGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 |
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| CDS TCA 90 bp | GCCTTGCTCCTCCTTCAGTTGCTTGATACTCTGTTTCTCGTGCACTaGGACCAGCTGACCCGCCCCGCAGCGCCGCCTGGCAGAAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLLLQLLDTLFLVH*DQLTRPAAPPGRKC Trigger: GCACTTTCTGCCAGGCGGCGCTGCGGGGCGGGTCAGCTGGTCTCAGTGCACGAGAAACAGAGTATCAAGCAACTGAAGGAGGAGCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGAATGCTGTCAATCCCAGCACCAGAAAGGAGACAGGAGGATCTCTGGGGAGGCAGCTGAGAGGATaGGGGCCGCCCACCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVNAVNPSTRKETGGSLGRQLRG*GPPTFF Trigger: GAAGAAGGTGGGCGGCCCCAATCCTCTCAGCTGCCT...CCCCAGAGATCCTCCTGTCTCCTTTCTGGTGCTGGGATTGACAGCATTCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CAA 90 bp | GCCTCGACCGCCTTCACAAAGGCCACTGTTCTGGGAGAAGGCTTGTCCAACACTAAGCCGAGATGCTTCTaGGCGTGTTTCTGCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASTAFTKATVLGEGLSNTKPRCF*ACFCLV Trigger: CACCAGGCAGAAACACGCCAAGAAGCATCTCGGCTT...AGTGTTGGACAAGCCTTCTCCCAGAACAGTGGCCTTTGTGAAGGCGGTCGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| CDS-3UTR CAA 90 bp | GCCACATTCAACAGTGAATGCTGTCAATCCCAGCACCAGAAAGGAGACAGGAGGGTTCCGCACCAGGCCTaGCTCCTCCTTCAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ATFNSECCQSQHQKGDRRVPHQA*LLLQLL Trigger: AAGCAACTGAAGGAGGAGCAAGGCCTGGTGCGGAAC...CCTCCTGTCTCCTTTCTGGTGCTGGGATTGACAGCATTCACTGTTGAATGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS CCA 90 bp | GTTCCCCTCATCCACCATGGACAGGAGACATTCAGACCCACTCACTaGGCTCTTGAAATGAGGACAGTTTCGAACCTGGCATTTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPLIHHGQETFRPTH*ALEMRTVSNLAFLC Trigger: GCACAGAAATGCCAGGTTCGAAACTGTCCTCATTTCAAGAGCCCAGTGAGTGGGTCTGAATGTCTCCTGTCCATGGTGGATGAGGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CAA 90 bp | TTCTTCTTTTTCTTCAGGCAGCTGAGAGGATTGGGGCCGCCCACCTTCTTCTTTTCGCGGACTCCGAAATaGTTGCGGAAAAAGCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FFFFFRQLRGLGPPTFFFSRTPK*LRKKPR Trigger: TCTCGGCTTTTTCCGCAACAATTTCGGAGTCCGCGA...AAAGAAGAAGGTGGGCGGCCCCAATCCTCTCAGCTGCCTGAAGAAAAAGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000059599.10 |
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| CDS-3UTR CAA 90 bp | CAGGAAGTTAGTTTCCACTGTCTTCCAGAGTATCCCCAGCACACATCAGCCTTCTCGCGGACTCCGAAATaGTTGCGGAAAAAGCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QEVSFHCLPEYPQHTSAFSRTPK*LRKKPR Trigger: TCTCGGCTTTTTCCGCAACAATTTCGGAGTCCGCGA...GAAGGCTGATGTGTGCTGGGGATACTCTGGAAGACAGTGGAAACTAACTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059599.10 ENSMUST00000161651.2 |
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| CDS TCA 90 bp | CATCCACCATGGACAGGAGACATTCAGACCCACTCACTGGGCTCTTaGAATGAGGACAGTTTCGAACCTGGCATTTCTGTGCAATCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HPPWTGDIQTHSLGS*NEDSFEPGISVQSV Trigger: AACTGATTGCACAGAAATGCCAGGTTCGAAACTGTCCTCATTTCAAGAGCCCAGTGAGTGGGTCTGAATGTCTCCTGTCCATGGTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CAA 90 bp | AGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTATCCCCAGCACACATAAGCCGAGATGCTTCTaGGCGTGTTTCTGCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLNRKLVSTVFQSIPSTHKPRCF*ACFCLV Trigger: CACCAGGCAGAAACACGCCAAGAAGCATCTCGGCTT...ATGTGTGCTGGGGATACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059599.10 ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGAATGCTGTCAATCCCAGCACCAGAAAGGAGACAGGAGGATCTCTGGGGATTCCAGGAGTCCTCTaGACTTTCACAGATAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVNAVNPSTRKETGGSLGIPGVL*TFTDKF Trigger: GAACTTATCTGTGAAAGTCAAGAGGACTCCTGGAAT...CCCCAGAGATCCTCCTGTCTCCTTTCTGGTGCTGGGATTGACAGCATTCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CAA 90 bp | CCACTGTACCGGCTGGTTTTGTGTGTCAACTTGACACAGGCTGGAGTTATCACATCCTCCTTCAGTTGCTaGATACTCTGTTTCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLYRLVLCVNLTQAGVITSSFSC*ILCFSC Trigger: GCACGAGAAACAGAGTATCAAGCAACTGAAGGAGGA...TGTGATAACTCCAGCCTGTGTCAAGTTGACACACAAAACCAGCCGGTACAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CAA 90 bp | ACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTATCAGGCAGCTGAGAGGATaGGGGCCGCCCACCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: THFHSLNRKLVSTVFQSIRQLRG*GPPTFF Trigger: GAAGAAGGTGGGCGGCCCCAATCCTCTCAGCTGCCT...GATACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | TGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGGCAGCTGAGAGGATaGGGGCCGCCCACCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WYTHFHSLNRKLVSTVFQRQLRG*GPPTFF Trigger: GAAGAAGGTGGGCGGCCCCAATCCTCTCAGCTGCCT...CTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS TCA 90 bp | ACCATGGACAGGAGACATTCAGACCCACTCACTGGGCTCTTGAAATaGGGACAGTTTCGAACCTGGCATTTCTGTGCAATCAGTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TMDRRHSDPLTGLLK*GQFRTWHFCAISFA Trigger: AGCAAAACTGATTGCACAGAAATGCCAGGTTCGAAACTGTCCTCATTTCAAGAGCCCAGTGAGTGGGTCTGAATGTCTCCTGTCCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CAA 90 bp | CCTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTGTTCCGCACCAGGCCTaGCTCCTCCTTCAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLVYTFSQFEQEVSFHCLVPHQA*LLLQLL Trigger: AAGCAACTGAAGGAGGAGCAAGGCCTGGTGCGGAAC...AAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | CTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCGTTCCGCACCAGGCCTaGCTCCTCCTTCAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWYTHFHSLNRKLVSTVFVPHQA*LLLQLL Trigger: AAGCAACTGAAGGAGGAGCAAGGCCTGGTGCGGAAC...GAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | GGACCTTACCTGCCGTACTACTGTGAGGAGTTGGGTTCAGATCCTCAGACTCATTCTGTGCAATCAGTTTaGCTCCATATAATTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPYLPYYCEELGSDPQTHSVQSV*LHIIPF Trigger: GAAAGGAATTATATGGAGCAAAACTGATTGCACAGA...ATGAGTCTGAGGATCTGAACCCAACTCCTCACAGTAGTACGGCAGGTAAGGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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| CDS-3UTR CAA 90 bp | AGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTATCCCCAGCACACATTCCTCCTTCAGTTGCTaGATACTCTGTTTCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLNRKLVSTVFQSIPSTHSSFSC*ILCFSC Trigger: GCACGAGAAACAGAGTATCAAGCAACTGAAGGAGGA...ATGTGTGCTGGGGATACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161651.2 |
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| CDS TCA 90 bp | AAGGCCACTGTTCTGGGAGAAGGCTTGTCCAACACTATAGTGTTCTaGATAATGAACATGAGAGGAATTCCAGGAGTCCTCTTGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KATVLGEGLSNTIVF*IMNMRGIPGVLLTF Trigger: GAAAGTCAAGAGGACTCCTGGAATTCCTCTCATGTTCATTATTCAGAACACTATAGTGTTGGACAAGCCTTCTCCCAGAACAGTGGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 |
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| CDS-3UTR CAA 90 bp | TACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTATAAGCCGAGATGCTTCTaGGCGTGTTTCTGCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTFSQFEQEVSFHCLPEYKPRCF*ACFCLV Trigger: CACCAGGCAGAAACACGCCAAGAAGCATCTCGGCTT...ATACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | CTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCGGACTCCGAAATTGTaGCGGAAAAAGCCGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: LWYTHFHSLNRKLVSTVFRTPKL*RKKPRC Trigger: GCATCTCGGCTTTTTCCGCAACAATTTCGGAGTCCG...GAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | TATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTCGGACTCCGAAATTGTaGCGGAAAAAGCCGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: YTHFHSLNRKLVSTVFQSRTPKL*RKKPRC Trigger: GCATCTCGGCTTTTTCCGCAACAATTTCGGAGTCCG...ACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | TATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGAGTTCGCGGACTCCGAAATaGTTGCGGAAAAAGCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YTHFHSLNRKLVSTVFQSSRTPK*LRKKPR Trigger: TCTCGGCTTTTTCCGCAACAATTTCGGAGTCCGCGA...ACTCTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | CTCTGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCTCCTCCTTCAGTTGCTaGATACTCTGTTTCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LWYTHFHSLNRKLVSTVFSSFSC*ILCFSC Trigger: GCACGAGAAACAGAGTATCAAGCAACTGAAGGAGGA...GAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS-3UTR CAA 90 bp | TGGTATACACATTTTCACAGTTTGAACAGGAAGTTAGTTTCCACTGTCTTCCAGATTCCAGGAGTCCTCTaGACTTTCACAGATAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WYTHFHSLNRKLVSTVFQIPGVL*TFTDKF Trigger: GAACTTATCTGTGAAAGTCAAGAGGACTCCTGGAAT...CTGGAAGACAGTGGAAACTAACTTCCTGTTCAAACTGTGAAAATGTGTATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136129.2 ENSMUST00000137116.3 |
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| CDS GCA 72 bp | GCTGGATGCGACCCCGCAGCGCCGCCTGGCAGAAAGTaGCATCCAGAAGGATCTGGTAGGGCTCGCGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: AGCDPAAPPGRK*HPEGSGRARGL Trigger: GAGTCCGCGAGCCCTACCAGATCCTTCTGGATGGCACTTTCTGCCAGGCGGCGCTGCGGGGTCGCATCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 |
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| CDS GCA 72 bp | GAAGGATCTGGTAGGGCTCGCGGACTCCGAAATTGTTaGGGAAAAAGCCGAGATGCTTCTTGGCGTGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EGSGRARGLRNC*GKSRDASWRVS Trigger: AGAAACACGCCAAGAAGCATCTCGGCTTTTTCCGCAACAATTTCGGAGTCCGCGAGCCCTACCAGATCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059599.10 ENSMUST00000137116.3 ENSMUST00000161651.2 |
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| CDS CCA 72 bp | CCACAAAATAATGATGAGGGTTCCCCTCATCCACCATaGACAGGAGACATTCAGACCCACTCACTGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PQNNDEGSPHPP*TGDIQTHSLGS Trigger: AGAGCCCAGTGAGTGGGTCTGAATGTCTCCTGTCCATGGTGGATGAGGGGAACCCTCATCATTATTTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
||
| CDS TCA 72 bp | AGGAGACATTCAGACCCACTCACTGGGCTCTTGAAATaGGGACAGTTTCGAACCTGGCATTTCTGTGCAATC | + |
|
Preference number: 6 (lower is better) Translates to: RRHSDPLTGLLK*GQFRTWHFCAI Trigger: GATTGCACAGAAATGCCAGGTTCGAAACTGTCCTCATTTCAAGAGCCCAGTGAGTGGGTCTGAATGTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137116.3 |
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