Pregenerated sensors for UTP18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054079Ensembl transcript IDs: ENSMUST00000066888.10
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTACCTATATTCTGGGAAGATGTACTaGGATGGGATTTTTCAACTG | + |
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Preference number: 2 (lower is better) Translates to: SLDRSVHRRNTNENIYLYSGKMY*DGIFQL Trigger: CAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGA...ATATAGGTAAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| 3UTR-3UTR CCA 90 bp | GCTAGAGCCAGGTGGAGTGGCATTTATAACTTAGCAGTTTATTATTTAGTATTAGAAGATGTACTGAGATaGGATTTTTCAACTGGATTT | + |
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Preference number: 2 (lower is better) Translates to: ARARWSGIYNLAVYYLVLEDVLR*DFSTGF Trigger: AAATCCAGTTGAAAAATCCCATCTCAGTACATCTTC...TAATACTAAATAATAAACTGCTAAGTTATAAATGCCACTCCACCTGGCTCTAGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| 3UTR-3UTR CAA 90 bp | TGCTCTGAAGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTCATATATTATCACACTaGGAAACTTCTGGGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: CSEAWTDLCTGGILMKIFHILSH*ETSGKM Trigger: CATCTTCCCAGAAGTTTCCAAGTGTGATAATATATG...AAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCTTCAGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR GCA 90 bp | TATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGGAGCTCCGCAGCCGCTaGAGCAGCGCGTCCTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: YHTWKLLGRCTEMGFFNWELRSR*SSASSS Trigger: CGACGAGGACGCGCTGCTGCAGCGGCTGCGGAGCTC...CCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CCA 90 bp | ATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGATGCCGCTCCCGGGTCTaGCTTTCCTCCCCGGCGTTG | + |
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Preference number: 4 (lower is better) Translates to: ITLGNFWEDVLRWDFSTGCRSRV*LSSPAL Trigger: CAACGCCGGGGAGGAAAGCCAGACCCGGGAGCGGCA...TCCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR TCA 90 bp | TGCTCTGAAGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTAGGATGGAACTGCACTaGCGAGATCCGAGCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: CSEAWTDLCTGGILMKIFRMELH*RDPSSG Trigger: ACCACTGCTCGGATCTCGTCAGTGCAGTTCCATCCT...AAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCTTCAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR GCA 90 bp | TATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGCTTGCTCCCAGCTTCTaGCCAATCAGGTACTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: YHTWKLLGRCTEMGFFNWLAPSF*PIRYSS Trigger: GGAGGAGTACCTGATTGGGCAGAAGCTGGGAGCAAG...CCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR GCA 90 bp | TGCTCTGAAGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTGCACCAGGATGGAACTaGACTGACGAGATCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: CSEAWTDLCTGGILMKIFAPGWN*TDEIRA Trigger: TGCTCGGATCTCGTCAGTGCAGTTCCATCCTGGTGC...AAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCTTCAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR TCA 90 bp | ATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGATTCACTTTCATCATCTaGAGATGTCCTCCGCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: ITLGNFWEDVLRWDFSTGFTFII*RCPPLA Trigger: AGCAAGCGGAGGACATCTTCAGATGATGAAAGTGAA...TCCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR TCA 90 bp | AGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTACCTATATCTGCAATGCCGCTTATaGGCAAGAAGGATCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: SLDRSVHRRNTNENIYLYLQCRL*ARRIHL Trigger: CAGATGGATCCTTCTTGCTCATAAGCGGCATTGCAG...ATATAGGTAAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR GCA 90 bp | GCTAGAGCCAGGTGGAGTGGCATTTATAACTTAGCAGTTTATTATTTAGTATTAAAGATGTCCTCCGCTTaGTCCCAGCTTCTGCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: ARARWSGIYNLAVYYLVLKMSSA*SQLLPN Trigger: ATTGGGCAGAAGCTGGGAGCAAGCGGAGGACATCTT...TAATACTAAATAATAAACTGCTAAGTTATAAATGCCACTCCACCTGGCTCTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CCA 90 bp | TATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGCAAGAAGGATCCATCTaGGGAGACTTCAAACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: YHTWKLLGRCTEMGFFNWQEGSI*GDFKLL Trigger: AAGCAGTTTGAAGTCTCCCCAGATGGATCCTTCTTG...CCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR TCA 90 bp | ATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGAGTTCATGCACTTCCTTaGATTCACATCCCACACATA | + |
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Preference number: 4 (lower is better) Translates to: ITLGNFWEDVLRWDFSTGVHALP*IHIPHI Trigger: TATGTGTGGGATGTGAATTCAAGGAAGTGCATGAAC...TCCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR GCA 90 bp | TGCTCTGAAGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTACTCCTCCCATGGCATaGTGGAATTCTTCTTTAAGT | + |
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Preference number: 4 (lower is better) Translates to: CSEAWTDLCTGGILMKIFTPPMA*WNSSLS Trigger: ACTTAAAGAAGAATTCCAGCATGCCATGGGAGGAGT...AAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCTTCAGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR GCA 90 bp | ATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGAGGGGAGACTTCAAACTaGTTCACTGTTTTCTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: ITLGNFWEDVLRWDFSTGGETSN*FTVFSF Trigger: GAAAGAGAAAACAGTGAAGCAGTTTGAAGTCTCCCC...TCCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CCA 90 bp | ATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGATGCTGTGCATACTTGTaGCTAAAACCTCTTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: ITLGNFWEDVLRWDFSTGCCAYL*LKPLLH Trigger: ATGGAGAAGAGGTTTTAGCCACAAGTATGCACAGCA...TCCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR TCA 90 bp | ATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGATGGAGGCAGGAATCTTaGTTGTATATGTTTACCACT | + |
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Preference number: 4 (lower is better) Translates to: ITLGNFWEDVLRWDFSTGWRQES*LYMFTT Trigger: AGTGGTAAACATATACAATCAAGATTCCTGCCTCCA...TCCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CCA 90 bp | AGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTACCTATATTTCATCCACCCAAACTaGCTGCTTCTTCTTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLDRSVHRRNTNENIYLYFIHPN*LLLLLR Trigger: TCTCAGAAGAAGAAGCAGCCAGTTTGGGTGGATGAA...ATATAGGTAAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR TCA 90 bp | AGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTACCTATATATACTGTCCATTCTTTaGTGCAGCAATGCTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: SLDRSVHRRNTNENIYLYILSIL*CSNAQS Trigger: GGATTGAGCATTGCTGCATCAAAGAATGGACAGTAT...ATATAGGTAAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR TCA 90 bp | GCTAGAGCCAGGTGGAGTGGCATTTATAACTTAGCAGTTTATTATTTAGTATTAGTACAGGAAGGAAGATaGACCAATCTGACAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ARARWSGIYNLAVYYLVLVQEGR*TNLTAS Trigger: AGAAGCTGTCAGATTGGTTCATCTTCCTTCCTGTAC...TAATACTAAATAATAAACTGCTAAGTTATAAATGCCACTCCACCTGGCTCTAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CCA 90 bp | GCTAGAGCCAGGTGGAGTGGCATTTATAACTTAGCAGTTTATTATTTAGTATTACTTCAAGATTCCTCTTaGAAGAGACGTGGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: ARARWSGIYNLAVYYLVLLQDSS*KRRGCG Trigger: TCCACATCCACGTCTCTTCCAAGAGGAATCTTGAAG...TAATACTAAATAATAAACTGCTAAGTTATAAATGCCACTCCACCTGGCTCTAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR GCA 90 bp | AGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTACCTATATAGACATAAAGAACCTTaGTGTGCATACTTGTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: SLDRSVHRRNTNENIYLYRHKEP*CAYLWL Trigger: TAGCCACAAGTATGCACAGCAAGGTTCTTTATGTCT...ATATAGGTAAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR GCA 90 bp | TGCTCTGAAGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTTCAATCCACATAAACTaGCTTCATCAAGAAATCTGT | + |
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Preference number: 4 (lower is better) Translates to: CSEAWTDLCTGGILMKIFSIHIN*LHQEIC Trigger: ACAGATTTCTTGATGAAGGCAGTTTATGTGGATTGA...AAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCTTCAGAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CCA 90 bp | AGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTACCTATATTGGGAGAAAAATCCATaGTTTGAACACGAGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SLDRSVHRRNTNENIYLYWEKNP*FEHEKE Trigger: CTCTTTCTCGTGTTCAAACCATGGATTTTTCTCCCA...ATATAGGTAAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR GCA 90 bp | AGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTACCTATATCAAGAAATCTGTTCATaGACTTCCTTGAATTCACAT | + |
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Preference number: 4 (lower is better) Translates to: SLDRSVHRRNTNENIYLYQEICS*TSLNSH Trigger: ATGTGAATTCAAGGAAGTGCATGAACAGATTTCTTG...ATATAGGTAAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS CCA 90 bp | ATAGCATTATCTACCCCAGAGACCATCACCACCTGTGCACCAGGATaGAACTGCACTGACGAGATCCGAGCAGTGGTTGGCCGTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: IALSTPETITTCAPG*NCTDEIRAVVGRSA Trigger: TGCTGAACGGCCAACCACTGCTCGGATCTCGTCAGTGCAGTTCCATCCTGGTGCACAGGTGGTGATGGTCTCTGGGGTAGATAATGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CAA 90 bp | TGCTCTGAAGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTGAAGATGTCCTCCGCTaGCTCCCAGCTTCTGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: CSEAWTDLCTGGILMKIFEDVLR*LPASAQ Trigger: TTGGGCAGAAGCTGGGAGCAAGCGGAGGACATCTTC...AAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCTTCAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CAA 90 bp | TGCTCTGAAGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTAGATCCGAGCAGTGGTaGGCCGTTCAGCATTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: CSEAWTDLCTGGILMKIFRSEQW*AVQHWQ Trigger: CTGCCAATGCTGAACGGCCAACCACTGCTCGGATCT...AAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCTTCAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CAA 90 bp | AGCCTGGACAGATCTGTGCACAGGAGGAATACTAATGAAAATATTTACCTATATGTTGGCCGTTCAGCATaGGCAGGCCGGCAGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SLDRSVHRRNTNENIYLYVGRSA*AGRQFF Trigger: GAAGAACTGCCGGCCTGCCAATGCTGAACGGCCAAC...ATATAGGTAAATATTTTCATTAGTATTCCTCCTGTGCACAGATCTGTCCAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CAA 90 bp | ATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGACCTTGCTGTGCATACTaGTGGCTAAAACCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: ITLGNFWEDVLRWDFSTGPCCAY*WLKPLL Trigger: GAGAAGAGGTTTTAGCCACAAGTATGCACAGCAAGG...TCCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CAA 90 bp | ATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGATTATTGGCTTTGGGTTaGTTTGCTGGAGGCAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: ITLGNFWEDVLRWDFSTGLLALG*FAGGRN Trigger: ATTCCTGCCTCCAGCAAACAAACCCAAAGCCAATAA...TCCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CAA 90 bp | TATCACACTTGGAAACTTCTGGGAAGATGTACTGAGATGGGATTTTTCAACTGGCTGGAGGCAGGAATCTaGATTGTATATGTTTACCAC | + |
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Preference number: 5 (lower is better) Translates to: YHTWKLLGRCTEMGFFNWLEAGI*IVYVYH Trigger: GTGGTAAACATATACAATCAAGATTCCTGCCTCCAG...CCAGTTGAAAAATCCCATCTCAGTACATCTTCCCAGAAGTTTCCAAGTGTGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CAA 90 bp | GCTAGAGCCAGGTGGAGTGGCATTTATAACTTAGCAGTTTATTATTTAGTATTATCTTCAAGATTCCTCTaGGAAGAGACGTGGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: ARARWSGIYNLAVYYLVLSSRFL*EETWMW Trigger: CCACATCCACGTCTCTTCCAAGAGGAATCTTGAAGA...TAATACTAAATAATAAACTGCTAAGTTATAAATGCCACTCCACCTGGCTCTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS-3UTR CAA 90 bp | GCTAGAGCCAGGTGGAGTGGCATTTATAACTTAGCAGTTTATTATTTAGTATTAAGAAAAATCCATGGTTaGAACACGAGAAAGAGTACT | + |
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Preference number: 5 (lower is better) Translates to: ARARWSGIYNLAVYYLVLRKIHG*NTRKST Trigger: AGTACTCTTTCTCGTGTTCAAACCATGGATTTTTCT...TAATACTAAATAATAAACTGCTAAGTTATAAATGCCACTCCACCTGGCTCTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS TCA 72 bp | TTTTCCACTTCCGATTCATCTGAGCTTCCATGTAGCTaGCCCCGCGAGCTCCGCAGCCGCTGCAGCAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: FSTSDSSELPCS*PRELRSRCSSA Trigger: CGCGCTGCTGCAGCGGCTGCGGAGCTCGCGGGGTCAGCTACATGGAAGCTCAGATGAATCGGAAGTGGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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| CDS GCA 72 bp | CATTCTTTGATGCAGCAATGCTCAATCCACATAAACTaGCTTCATCAAGAAATCTGTTCATGCACTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: HSLMQQCSIHIN*LHQEICSCTSL Trigger: CAAGGAAGTGCATGAACAGATTTCTTGATGAAGGCAGTTTATGTGGATTGAGCATTGCTGCATCAAAGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066888.10 |
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