Pregenerated sensors for UTP15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041747Ensembl transcript IDs: ENSMUST00000040972.4
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACAGTCCCACAAACAGCTGAGGAAGGCATATGACTCAAGACTCTaGAGTGACCAGCGAGAGGACAGGAAGCTCCCCAGGACACTGGGG | + |
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Preference number: 1 (lower is better) Translates to: RQSHKQLRKAYDSRL*SDQREDRKLPRTLG Trigger: CCCCAGTGTCCTGGGGAGCTTCCTGTCCTCTCGCTGGTCACTTCAGAGTCTTGAGTCATATGCCTTCCTCAGCTGTTTGTGGGACTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 90 bp | AGAGGACAACCAAAGCACGGTGAAGACGGAAGGAAGGAAGCAGGCTaGGGGGCGGGAATTGGTTCAGTCAGAGCTCTCTGGACACACAAG | + |
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Preference number: 1 (lower is better) Translates to: RGQPKHGEDGRKEAG*GAGIGSVRALWTHK Trigger: CTTGTGTGTCCAGAGAGCTCTGACTGAACCAATTCCCGCCCCTCAGCCTGCTTCCTTCCTTCCGTCTTCACCGTGCTTTGGTTGTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR CCA 90 bp | GACTCTGAAGTGACCAGCGAGAGGACAGGAAGCTCCCCAGGACACTaGGGACAGCGATGGATGCTTTGTTGTTGCTGTTTGCTCTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: DSEVTSERTGSSPGH*GQRWMLCCCCLLFL Trigger: TAGGAAGAGCAAACAGCAACAACAAAGCATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCTGTCCTCTCGCTGGTCACTTCAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 90 bp | GCACGGAAGTCACAGCCGTGCAGTCAGTATGCTGGTCAAAGCCACTaGCTGCCCATCAGGAACACCTCAGAAAGCCAAGAAGAAAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: ARKSQPCSQYAGQSH*LPIRNTSESQEEKN Trigger: ATTCTTTTCTTCTTGGCTTTCTGAGGTGTTCCTGATGGGCAGTCAGTGGCTTTGACCAGCATACTGACTGCACGGCTGTGACTTCCGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 90 bp | CCTACAGTTAGTTGGATGGTGGAACACACCTTTAATTCCTGCGCTTaGAACGCAAAGGCAGGTGGGTCTCTGAGTTCGAAGCCAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: PTVSWMVEHTFNSCA*NAKAGGSLSSKPVW Trigger: CCAGACTGGCTTCGAACTCAGAGACCCACCTGCCTTTGCGTTTCAAGCGCAGGAATTAAAGGTGTGTTCCACCATCCAACTAACTGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR GCA 90 bp | GTAATAGTTTCAGGGAATATAAAAACAACTCCTGAGCTGTGGTGGTaGACACCTTTAACTCCCAGCGCTTGGAAGGCTGGGAGGCATGTG | + |
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Preference number: 1 (lower is better) Translates to: VIVSGNIKTTPELWW*TPLTPSAWKAGRHV Trigger: CACATGCCTCCCAGCCTTCCAAGCGCTGGGAGTTAAAGGTGTGCACCACCACAGCTCAGGAGTTGTTTTTATATTCCCTGAAACTATTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 90 bp | ACTGCAGAACTGCTTCAGCTCATGAAAGGACGCTGTACCTACTGTTaGACATGGGTACACATCAGAACAGTCTTACTGTACCCCCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: TAELLQLMKGRCTYC*TWVHIRTVLLYPLV Trigger: CACAAGGGGGTACAGTAAGACTGTTCTGATGTGTACCCATGTTCAACAGTAGGTACAGCGTCCTTTCATGAGCTGAAGCAGTTCTGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 90 bp | TGTGAAGGACAGATAAGAGAATCGTTATGGAGGGTTACATATTCATaGTACACTTTGCCAAAGCACATGGGCAGGCTGAAAGGCCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: CEGQIRESLWRVTYS*YTLPKHMGRLKGLY Trigger: GTAAAGGCCTTTCAGCCTGCCCATGTGCTTTGGCAAAGTGTATCATGAATATGTAACCCTCCATAACGATTCTCTTATCTGTCCTTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR CAA 90 bp | GAGGACAGGAAGCTCCCCAGGACACTGGGGACAGCGATGGATGCTTaGTTGTTGCTGTTTGCTCTTCCTATTTCCCAGGCTAGAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: EDRKLPRTLGTAMDA*LLLFALPISQARSR Trigger: CCTGCTTCTAGCCTGGGAAATAGGAAGAGCAAACAGCAACAACAAAGCATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCTGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR TCA 90 bp | GTGACCAGCGAGAGGACAGGAAGCTCCCCAGGACACTGGGGACAGCGATGGATGTGGAAAACCACATCTTaGAACAGGTACTTATGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VTSERTGSSPGHWGQRWMWKTTS*NRYLCP Trigger: GGGACATAAGTACCTGTTTCAAGATGTGGTTTTCCA...CATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCTGTCCTCTCGCTGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR CAA 90 bp | GACAGGAAGCTCCCCAGGACACTGGGGACAGCGATGGATGCTTTGTaGTTGCTGTTTGCTCTTCCTATTTCCCAGGCTAGAAGCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: DRKLPRTLGTAMDAL*LLFALPISQARSRK Trigger: TTTCCTGCTTCTAGCCTGGGAAATAGGAAGAGCAAACAGCAACAACAAAGCATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR CAA 90 bp | AGGAAGCTCCCCAGGACACTGGGGACAGCGATGGATGCTTTGTTGTaGCTGTTTGCTCTTCCTATTTCCCAGGCTAGAAGCAGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: RKLPRTLGTAMDALL*LFALPISQARSRKQ Trigger: TTGTTTCCTGCTTCTAGCCTGGGAAATAGGAAGAGCAAACAGCAACAACAAAGCATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR TCA 90 bp | GGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCCATCAGCACATGGGCAGGCTaGAAGGCCTTTACTATAGAG | + |
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Preference number: 2 (lower is better) Translates to: GRIITIFPPRTSSARDSISTWAG*KAFTIE Trigger: CTCTATAGTAAAGGCCTTTCAGCCTGCCCATGTGCT...GATGGAATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR CCA 90 bp | TATGAGGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCTGAGGGGCGGGAATTaGTTCAGTCAGAGCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: YEAESLQSFPQGHPRLGILRGGN*FSQSSL Trigger: CAGAGAGCTCTGACTGAACCAATTCCCGCCCCTCAG...AATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCCTCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAACAGGAAGGAAGCAGGCTaGGGGGCGGGAATTGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: EASLVTVISKTAKATQKNRKEAG*GAGIGS Trigger: TGAACCAATTCCCGCCCCTCAGCCTGCTTCCTTCCT...GTTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAACGCTGGTCAAAGCCACTaGCTGCCCATCAGGAACACC | + |
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Preference number: 2 (lower is better) Translates to: EASLVTVISKTAKATQKNAGQSH*LPIRNT Trigger: GGTGTTCCTGATGGGCAGTCAGTGGCTTTGACCAGC...GTTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCCATCATTCATGATACACTTTaGCAAAGCACATGGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GRIITIFPPRTSSARDSIIHDTL*QSTWAG Trigger: GCCTGCCCATGTGCTTTGGCAAAGTGTATCATGAAT...GATGGAATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAAAACCTACAGTTAGTTGGATGGTGGAACACACCTTTAATTCCTGCGCTAGGACTCTGTCCGCTTaGAAACCTCTCCAGAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FRKPTVSWMVEHTFNSCARTLSA*KPLQRA Trigger: GGCCCTCTGGAGAGGTTTCCAAGCGGACAGAGTCCT...AGCGCAGGAATTAAAGGTGTGTTCCACCATCCAACTAACTGTAGGTTTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR CCA 90 bp | TATGAGGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCACTGGGGACAGCGATaGATGCTTTGTTGTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: YEAESLQSFPQGHPRLGIHWGQR*MLCCCC Trigger: ACAGCAACAACAAAGCATCCATCGCTGTCCCCAGTG...AATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCCTCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR CAA 90 bp | TACTGCAGAACTGCTTCAGCTCATGAAAGGACGCTGTACCTACTGTaGAACATGGGTACACATCAGAACAGTCTTACTGTACCCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: YCRTASAHERTLYLL*NMGTHQNSLTVPPC Trigger: ACAAGGGGGTACAGTAAGACTGTTCTGATGTGTACCCATGTTCAACAGTAGGTACAGCGTCCTTTCATGAGCTGAAGCAGTTCTGCAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAACTATGACTCAAGACTCTaGAGTGACCAGCGAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: EASLVTVISKTAKATQKNYDSRL*SDQRED Trigger: GTCCTCTCGCTGGTCACTTCAGAGTCTTGAGTCATA...GTTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR TCA 90 bp | ATAGTTTCAGGGAATATAAAAACAACTCCTGAGCTGTGGTGGTGCACACCTTTAACAACCAAAGCACGGTaGAGACGGAAGGAAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: IVSGNIKTTPELWWCTPLTTKAR*RRKEGS Trigger: GCTTCCTTCCTTCCGTCTTCACCGTGCTTTGGTTGT...TAAAGGTGTGCACCACCACAGCTCAGGAGTTGTTTTTATATTCCCTGAAACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAAAACCTACAGTTAGTTGGATGGTGGAACACACCTTTAATTCCTGCGCTAGGGTTACATATTCATaGTACACTTTGCCAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: FRKPTVSWMVEHTFNSCARVTYS*YTLPKH Trigger: GTGCTTTGGCAAAGTGTATCATGAATATGTAACCCT...AGCGCAGGAATTAAAGGTGTGTTCCACCATCCAACTAACTGTAGGTTTTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR GCA 90 bp | ACAACTACATTGAGGACTCTGAGGTCCCTGGTCCTTTTAAGGGTTTGTAATTACTGGATGCTTTGTTGTTaGTGTTTGCTCTTCCTATTT | + |
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Preference number: 2 (lower is better) Translates to: TTTLRTLRSLVLLRVCNYWMLCC*CLLFLF Trigger: AAATAGGAAGAGCAAACAGCAACAACAAAGCATCCA...GTAATTACAAACCCTTAAAAGGACCAGGGACCTCAGAGTCCTCAATGTAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR GCA 72 bp | AAGGAAGGCACGGAAGTCACAGCCGTGCAGTCAGTATaGTGGTCAAAGCCACTGACTGCCCATCAGGAACAC | + |
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Preference number: 3 (lower is better) Translates to: KEGTEVTAVQSV*WSKPLTAHQEH Trigger: GTGTTCCTGATGGGCAGTCAGTGGCTTTGACCAGCATACTGACTGCACGGCTGTGACTTCCGTGCCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 72 bp | CACAAACAGCTGAGGAAGGCATATGACTCAAGACTCTaGAGTGACCAGCGAGAGGACAGGAAGCTCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HKQLRKAYDSRL*SDQREDRKLPR Trigger: CCTGGGGAGCTTCCTGTCCTCTCGCTGGTCACTTCAGAGTCTTGAGTCATATGCCTTCCTCAGCTGTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR CCA 72 bp | AATGATCCAAGAAACGCTGCAGAGGTGCACAGGAGATaGCAGCTACAGCTTCCAGCAGACTCGCAACTGCTC | + |
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Preference number: 3 (lower is better) Translates to: NDPRNAAEVHRR*QLQLPADSQLL Trigger: GAGCAGTTGCGAGTCTGCTGGAAGCTGTAGCTGCCATCTCCTGTGCACCTCTGCAGCGTTTCTTGGATCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 72 bp | TCACAGCCGTGCAGTCAGTATGCTGGTCAAAGCCACTaGCTGCCCATCAGGAACACCTCAGAAAGCCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: SQPCSQYAGQSH*LPIRNTSESQE Trigger: TTCTTGGCTTTCTGAGGTGTTCCTGATGGGCAGTCAGTGGCTTTGACCAGCATACTGACTGCACGGCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR CAA 90 bp | TCGGGATTCCATCACCAGACATTTATTAACCTAAGTGGGGTCACTGAAGGAAGGCAGGACTCTGTCCGCTaGGAAACCTCTCCAGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: SGFHHQTFINLSGVTEGRQDSVR*ETSPEG Trigger: GCCCTCTGGAGAGGTTTCCAAGCGGACAGAGTCCTG...CCTTCCTTCAGTGACCCCACTTAGGTTAATAAATGTCTGGTGATGGAATCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR GCA 72 bp | GGAGATGGCAGCTACAGCTTCCAGCAGACTCGCAACTaGTCCTGTAAGCTCTCTGCATACCTAACAAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: GDGSYSFQQTRN*SCKLSAYLTRV Trigger: AACTCTTGTTAGGTATGCAGAGAGCTTACAGGAGCAGTTGCGAGTCTGCTGGAAGCTGTAGCTGCCATCTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR GCA 72 bp | TCAGGGAATATAAAAACAACTCCTGAGCTGTGGTGGTaGACACCTTTAACTCCCAGCGCTTGGAAGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SGNIKTTPELWW*TPLTPSAWKAG Trigger: CCCAGCCTTCCAAGCGCTGGGAGTTAAAGGTGTGCACCACCACAGCTCAGGAGTTGTTTTTATATTCCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR CCA 72 bp | CACTTCCAGGGGCAATATTCAGTGATCCGCCACACTTaGAAGACAGTCCCACAAACAGCTGAGGAAGGCATA | + |
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Preference number: 3 (lower is better) Translates to: HFQGQYSVIRHT*KTVPQTAEEGI Trigger: TATGCCTTCCTCAGCTGTTTGTGGGACTGTCTTCCAAGTGTGGCGGATCACTGAATATTGCCCCTGGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 72 bp | AGTTGGATGGTGGAACACACCTTTAATTCCTGCGCTTaGAACGCAAAGGCAGGTGGGTCTCTGAGTTCGAAG | + |
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Preference number: 3 (lower is better) Translates to: SWMVEHTFNSCA*NAKAGGSLSSK Trigger: CTTCGAACTCAGAGACCCACCTGCCTTTGCGTTTCAAGCGCAGGAATTAAAGGTGTGTTCCACCATCCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 72 bp | TCACAAGCCGCTGTACTGCAGAACTGCTTCAGCTCATaGAAGGACGCTGTACCTACTGTTGAACATGGGTAC | + |
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Preference number: 3 (lower is better) Translates to: SQAAVLQNCFSS*KDAVPTVEHGY Trigger: GTACCCATGTTCAACAGTAGGTACAGCGTCCTTTCATGAGCTGAAGCAGTTCTGCAGTACAGCGGCTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 72 bp | GCAGGTAATAGTTTCAGGGAATATAAAAACAACTCCTaGGCTGTGGTGGTGCACACCTTTAACTCCCAGCGC | + |
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Preference number: 3 (lower is better) Translates to: AGNSFREYKNNS*AVVVHTFNSQR Trigger: GCGCTGGGAGTTAAAGGTGTGCACCACCACAGCTCAGGAGTTGTTTTTATATTCCCTGAAACTATTACCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR CCA 72 bp | ATAGTTTCAGGGAATATAAAAACAACTCCTGAGCTGTaGTGGTGCACACCTTTAACTCCCAGCGCTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: IVSGNIKTTPEL*WCTPLTPSAWK Trigger: CTTCCAAGCGCTGGGAGTTAAAGGTGTGCACCACCACAGCTCAGGAGTTGTTTTTATATTCCCTGAAACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR CAA 90 bp | GAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAACACAGCGATGGATGCTTaGTTGTTGCTGTTTGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: EASLVTVISKTAKATQKNTAMDA*LLLFAL Trigger: AAGAGCAAACAGCAACAACAAAGCATCCATCGCTGT...GTTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 72 bp | ATTCATGATACACTTTGCCAAAGCACATGGGCAGGCTaGAAGGCCTTTACTATAGAGGAGAGGACAACCAAA | + |
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Preference number: 3 (lower is better) Translates to: IHDTLCQSTWAG*KAFTIEERTTK Trigger: TTTGGTTGTCCTCTCCTCTATAGTAAAGGCCTTTCAGCCTGCCCATGTGCTTTGGCAAAGTGTATCATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 72 bp | CAGTGCAGGAATGATAAGGACAGCAGCGTGGAGAGGTaGGTGACTTTAATTAATTCAGGGTTCTATAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: QCRNDKDSSVER*VTLINSGFYKR Trigger: TCTCTTATAGAACCCTGAATTAATTAAAGTCACTCACCTCTCCACGCTGCTGTCCTTATCATTCCTGCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR TCA 72 bp | CAGATAAGAGAATCGTTATGGAGGGTTACATATTCATaGTACACTTTGCCAAAGCACATGGGCAGGCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: QIRESLWRVTYS*YTLPKHMGRLK Trigger: TTTCAGCCTGCCCATGTGCTTTGGCAAAGTGTATCATGAATATGTAACCCTCCATAACGATTCTCTTATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR-3UTR CAA 90 bp | ACAACTACATTGAGGACTCTGAGGTCCCTGGTCCTTTTAAGGGTTTGTAATTACATGGAAAACCACATCTaGAAACAGGTACTTATGTCC | + |
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Preference number: 3 (lower is better) Translates to: TTTLRTLRSLVLLRVCNYMENHI*KQVLMS Trigger: GGACATAAGTACCTGTTTCAAGATGTGGTTTTCCAT...GTAATTACAAACCCTTAAAAGGACCAGGGACCTCAGAGTCCTCAATGTAGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| 3UTR GCA 72 bp | TCAGCAGTGTTTCTAATGGTCCCATTTAACATCAGTTaGTTCAGCAACTTAAGAGCACAGACATTTAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SAVFLMVPFNIS*FSNLRAQTFKK Trigger: TTTCTTAAATGTCTGTGCTCTTAAGTTGCTGAAGCAACTGATGTTAAATGGGACCATTAGAAACACTGCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR TCA 90 bp | TGTCCGCTTGGAAACCTCTCCAGAGGGCCACGAGGCCCCACGGCAACAGAGATTCACCAGAAGCCCTCCTaGGGGGAAAAGCAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: CPLGNLSRGPRGPTATEIHQKPS*GEKQDT Trigger: AGTGTCCTGCTTTTCCCCTCAGGAGGGCTTCTGGTG...AATCTCTGTTGCCGTGGGGCCTCGTGGCCCTCTGGAGAGGTTTCCAAGCGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR GCA 90 bp | GTGACCAGCGAGAGGACAGGAAGCTCCCCAGGACACTGGGGACAGCGATGGATGACACTCTCCACTGGCTaGCCATGCTCCACACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VTSERTGSSPGHWGQRWMTLSTG*PCSTQR Trigger: TCTCTGTGTGGAGCATGGGCAGCCAGTGGAGAGTGT...CATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCTGTCCTCTCGCTGGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR GCA 90 bp | GTGACCAGCGAGAGGACAGGAAGCTCCCCAGGACACTGGGGACAGCGATGGATGTCCACTGGCTGCCCATaGTCCACACAGAGAACATTC | + |
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Preference number: 4 (lower is better) Translates to: VTSERTGSSPGHWGQRWMSTGCP*STQRTF Trigger: GAATGTTCTCTGTGTGGAGCATGGGCAGCCAGTGGA...CATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCTGTCCTCTCGCTGGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR GCA 90 bp | AGTGACCAGCGAGAGGACAGGAAGCTCCCCAGGACACTGGGGACAGCGATGGATAATAAAGGTTCGATATaGAGGCCTCCTCCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SDQREDRKLPRTLGTAMDNKGSI*RPPPPR Trigger: CCGAGGAGGAGGAGGCCTGCATATCGAACCTTTATT...ATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCTGTCCTCTCGCTGGTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR GCA 90 bp | GGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCCATCGTGTGGCCTTCAAACTaGCTGAGGGGAGCCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRIITIFPPRTSSARDSIVWPSN*LRGALP Trigger: TGGGAGGGCTCCCCTCAGGCAGTTTGAAGGCCACAC...GATGGAATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR GCA 90 bp | GGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCCATCGGTCTGGGTTCAGTTTaGTGGCACAGCCGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRIITIFPPRTSSARDSIGLGSV*WHSRTS Trigger: TGAGGTGCGGCTGTGCCAGCAAACTGAACCCAGACC...GATGGAATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| 3UTR CAA 72 bp | GCTAGAAGCAGGAAACAAAACCGGGGCTCTGTTCACTaGGCAGGACTCTGTCCGCTTGGAAACCTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARSRKQNRGSVH*AGLCPLGNLSR Trigger: TCTGGAGAGGTTTCCAAGCGGACAGAGTCCTGCCAAGTGAACAGAGCCCCGGTTTTGTTTCCTGCTTCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR GCA 90 bp | TGTCCGCTTGGAAACCTCTCCAGAGGGCCACGAGGCCCCACGGCAACAGAGATTGATGATGATCTCAGCTaGATTAATCAAAACAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPLGNLSRGPRGPTATEIDDDLS*INQNRG Trigger: GCCCCTGTTTTGATTAATGCAGCTGAGATCATCATC...AATCTCTGTTGCCGTGGGGCCTCGTGGCCCTCTGGAGAGGTTTCCAAGCGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| 3UTR CAA 72 bp | CTCCCCAGGACACTGGGGACAGCGATGGATGCTTTGTaGTTGCTGTTTGCTCTTCCTATTTCCCAGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLGTAMDAL*LLFALPISQAR Trigger: TCTAGCCTGGGAAATAGGAAGAGCAAACAGCAACAACAAAGCATCCATCGCTGTCCCCAGTGTCCTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR TCA 90 bp | TATGAGGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTGGCCTTCAAACTGCCTaGGGGGAGCCCTCCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: YEAESLQSFPQGHPRLGIGLQTA*GEPSHL Trigger: TAAATGGGAGGGCTCCCCTCAGGCAGTTTGAAGGCC...AATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCCTCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CCA 90 bp | AGTGACCAGCGAGAGGACAGGAAGCTCCCCAGGACACTGGGGACAGCGATGGATGAGAAAAGTCTACTTTaGACACTGCACCAAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDQREDRKLPRTLGTAMDEKSLL*TLHQIP Trigger: AGGAATTTGGTGCAGTGTCCAAAGTAGACTTTTCTC...ATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCTGTCCTCTCGCTGGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CCA 90 bp | AGTGACCAGCGAGAGGACAGGAAGCTCCCCAGGACACTGGGGACAGCGATGGATGACTGCATAGTTATATaGAAGCTGAGGAGAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDQREDRKLPRTLGTAMDDCIVI*KLRRKV Trigger: GACTTTTCTCCTCAGCTTCCATATAACTATGCAGTC...ATCCATCGCTGTCCCCAGTGTCCTGGGGAGCTTCCTGTCCTCTCGCTGGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CCA 90 bp | GAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAACCAGGACACTCTCCACTaGCTGCCCATGCTCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: EASLVTVISKTAKATQKNQDTLH*LPMLHT Trigger: TGTGTGGAGCATGGGCAGCCAGTGGAGAGTGTCCTG...GTTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CCA 90 bp | ACAACTACATTGAGGACTCTGAGGTCCCTGGTCCTTTTAAGGGTTTGTAATTACCTGGGTTCAGTTTGCTaGCACAGCCGCACCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TTTLRTLRSLVLLRVCNYLGSVC*HSRTSR Trigger: ACGTGAGGTGCGGCTGTGCCAGCAAACTGAACCCAG...GTAATTACAAACCCTTAAAAGGACCAGGGACCTCAGAGTCCTCAATGTAGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR TCA 90 bp | GGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCCATCGTAAAATCTACTGTATaGACTGCTTTTGTGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRIITIFPPRTSSARDSIVKSTV*TAFVWP Trigger: AGGCCACACAAAAGCAGTTCATACAGTAGATTTTAC...GATGGAATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR TCA 90 bp | ATAGTTTCAGGGAATATAAAAACAACTCCTGAGCTGTGGTGGTGCACACCTTTACCAGCAACGAGCAACTaGCCATCCTGTCGAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVSGNIKTTPELWWCTPLPATSN*PSCRKV Trigger: GACTTTTCGACAGGATGGTCAGTTGCTCGTTGCTGG...TAAAGGTGTGCACCACCACAGCTCAGGAGTTGTTTTTATATTCCCTGAAACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR GCA 90 bp | GGCAACAGAGATTTTGGCTCCATTAAGGTCAGAATTAACACATCCAGGGTAAACTCATACCCCTCTAGGTaGTTCTTTGCTGGCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GNRDFGSIKVRINTSRVNSYPSR*FFAGLL Trigger: CAGTAGGCCAGCAAAGAAGCACCTAGAGGGGTATGA...GTTTACCCTGGATGTGTTAATTCTGACCTTAATGGAGCCAAAATCTCTGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CCA 90 bp | ACAGCGATGGATGCTTTGTTGTTGCTGTTTGCTCTTCCTATTTCCCAGGCTAGACAGTACAGAGTGTCTTaGGTGATCTTCTCACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAMDALLLLFALPISQARQYRVS*VIFSPS Trigger: ACTTGGTGAGAAGATCACCCAAGACACTCTGTACTG...TCTAGCCTGGGAAATAGGAAGAGCAAACAGCAACAACAAAGCATCCATCGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CCA 90 bp | TATGAGGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCACTCAGTATTCCGTTaGTCATTCCTACAACTATCG | + |
|
Preference number: 4 (lower is better) Translates to: YEAESLQSFPQGHPRLGIHSVFR*SFLQLS Trigger: CGATAGTTGTAGGAATGACCAACGGAATACTGAGTG...AATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCCTCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CCA 90 bp | GGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCCATCTCAACTACTGATGACTaGCCAATCACAGGTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: GRIITIFPPRTSSARDSISTTDD*PITGKY Trigger: ATATTTACCTGTGATTGGCCAGTCATCAGTAGTTGA...GATGGAATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR TCA 90 bp | GGCAACAGAGATTTTGGCTCCATTAAGGTCAGAATTAACACATCCAGGGTAAACTGCCAGACTCAAGATTaGAGCTGCGTAGTCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNRDFGSIKVRINTSRVNCQTQD*SCVVKA Trigger: AGCTTTGACTACGCAGCTTCAATCTTGAGTCTGGCA...GTTTACCCTGGATGTGTTAATTCTGACCTTAATGGAGCCAAAATCTCTGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR GCA 90 bp | GGCAACAGAGATTTTGGCTCCATTAAGGTCAGAATTAACACATCCAGGGTAAACACCTCTGTCCAGAGCTaGTCAGACACAAACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GNRDFGSIKVRINTSRVNTSVQS*SDTNMS Trigger: TGACATGTTTGTGTCTGAGCAGCTCTGGACAGAGGT...GTTTACCCTGGATGTGTTAATTCTGACCTTAATGGAGCCAAAATCTCTGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CCA 90 bp | TCGGGATTCCATCACCAGACATTTATTAACCTAAGTGGGGTCACTGAAGGAAGGTGTTACAAAAAGGTCTaGGTTCAGTTTGCTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SGFHHQTFINLSGVTEGRCYKKV*VQFAGT Trigger: TGTGCCAGCAAACTGAACCCAGACCTTTTTGTAACA...CCTTCCTTCAGTGACCCCACTTAGGTTAATAAATGTCTGGTGATGGAATCCCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR CCA 90 bp | GAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAACCGACTTTGTAGGAGGTaGTGCTGTAGACTTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EASLVTVISKTAKATQKNRLCRR*CCRLSL Trigger: AAGTGAAAGTCTACAGCACCACCTCCTACAAAGTCG...GTTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR GCA 90 bp | CGAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAACGAAGAAGCTGTGACTaGATAGTTATATGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSQSGHSDFQDSKSYTEKRRSCD*IVIWKL Trigger: CAGCTTCCATATAACTATGCAGTCACAGCTTCTTCG...TTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR GCA 90 bp | TTCAGAAAACCTACAGTTAGTTGGATGGTGGAACACACCTTTAATTCCTGCGCTAAGAGACGTCTTCTTTaGTTCAGACTTCCGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FRKPTVSWMVEHTFNSCAKRRLL*FRLPVF Trigger: AAACACCGGAAGTCTGAAGCAAAGAAGACGTCTCTT...AGCGCAGGAATTAAAGGTGTGTTCCACCATCCAACTAACTGTAGGTTTTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR GCA 90 bp | GGCAACAGAGATTTTGGCTCCATTAAGGTCAGAATTAACACATCCAGGGTAAACGTCTACTTTGGACACTaGACCAAATTCCTTAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNRDFGSIKVRINTSRVNVYFGH*TKFLNL Trigger: CAGATTAAGGAATTTGGTGCAGTGTCCAAAGTAGAC...GTTTACCCTGGATGTGTTAATTCTGACCTTAATGGAGCCAAAATCTCTGTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR GCA 90 bp | GAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAACATCTACTGTATGAACTaGTTTTGTGTGGCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EASLVTVISKTAKATQKNIYCMN*FCVAFK Trigger: TTTGAAGGCCACACAAAAGCAGTTCATACAGTAGAT...GTTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR CAA 90 bp | TATGAGGCAGAATCATTACAATCTTTCCCCCAAGGACATCCTCGGCTCGGGATTCGACCTGCAAGAGCATaGGCAAGGACGCCTCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: YEAESLQSFPQGHPRLGIRPARA*ARTPLR Trigger: TCGGAGAGGCGTCCTTGCCAATGCTCTTGCAGGTCG...AATCCCGAGCCGAGGATGTCCTTGGGGGAAAGATTGTAATGATTCTGCCTCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR CAA 90 bp | ACAGCGATGGATGCTTTGTTGTTGCTGTTTGCTCTTCCTATTTCCCAGGCTAGATGTCGCTGGGCTGCGTaGGTGACTCTGTCTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TAMDALLLLFALPISQARCRWAA*VTLSSP Trigger: AGGAGAAGACAGAGTCACCAACGCAGCCCAGCGACA...TCTAGCCTGGGAAATAGGAAGAGCAAACAGCAACAACAAAGCATCCATCGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS GCA 90 bp | GGTTCGATATGCAGGCCTCCTCCTCCTCGGAAGAGACGTCTTCTTTaGTTCAGACTTCCGGTGTTTAACACTCAGTATTCCGTTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSICRPPPPRKRRLL*FRLPVFNTQYSVGH Trigger: ATGACCAACGGAATACTGAGTGTTAAACACCGGAAGTCTGAAGCAAAGAAGACGTCTCTTCCGAGGAGGAGGAGGCCTGCATATCGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS GCA 90 bp | TGTGAGACCCGAAAGCTTTTCAGATCCTTGTCATACCCCTCTAGGTaGTTCTTTGCTGGCCTACTGACCATGATGTCATCCCGTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CETRKLFRSLSYPSR*FFAGLLTMMSSRCF Trigger: GAAGCAACGGGATGACATCATGGTCAGTAGGCCAGCAAAGAAGCACCTAGAGGGGTATGACAAGGATCTGAAAAGCTTTCGGGTCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS TCA 90 bp | TACAACTATCGTCTCATCTTGATGAGAGAGTGCCAGACTCAAGATTaGAGCTGCGTAGTCAAAGCTGTGGACGACTTTGTAGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YNYRLILMRECQTQD*SCVVKAVDDFVGGG Trigger: ACCACCTCCTACAAAGTCGTCCACAGCTTTGACTACGCAGCTTCAATCTTGAGTCTGGCACTCTCTCATCAAGATGAGACGATAGTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR CAA 90 bp | TCGGGATTCCATCACCAGACATTTATTAACCTAAGTGGGGTCACTGAAGGAAGGCTGTATGAACTGCTTTaGTGTGGCCTTCAAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGFHHQTFINLSGVTEGRLYELL*CGLQTA Trigger: GGCAGTTTGAAGGCCACACAAAAGCAGTTCATACAG...CCTTCCTTCAGTGACCCCACTTAGGTTAATAAATGTCTGGTGATGGAATCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS GCA 90 bp | GAGCCCTCCCATTTATATCAAAAAGTTGAACTACACCATCTTCACTaGCAGCAACGAGCAACTGACCATCCTGTCGAAAAGTCGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: EPSHLYQKVELHHLH*QQRATDHPVEKSHN Trigger: ATTGTGCGACTTTTCGACAGGATGGTCAGTTGCTCGTTGCTGGCAGTGAAGATGGTGTAGTTCAACTTTTTGATATAAATGGGAGGGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR CAA 90 bp | CGAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAAAAGCTTTTCAGATCCTaGTCATACCCCTCTAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSQSGHSDFQDSKSYTEKKLFRS*SYPSRC Trigger: GCACCTAGAGGGGTATGACAAGGATCTGAAAAGCTT...TTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTCG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS-3UTR CAA 90 bp | GAAGCCAGTCTGGTCACAGTGATTTCCAAGACAGCAAAAGCTACACAGAAAAACGGAGAAAAGTCTACTTaGGACACTGCACCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: EASLVTVISKTAKATQKNGEKST*DTAPNS Trigger: GGAATTTGGTGCAGTGTCCAAAGTAGACTTTTCTCC...GTTTTTCTGTGTAGCTTTTGCTGTCTTGGAAATCACTGTGACCAGACTGGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS TCA 90 bp | TCTGAACAGGGGTCTTATAGTTGTTCCAGTACAGAGTGTCTTGGGTaGTCTTCTCACCAAGTACAGGATATGTTTGAATCGCTACAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SEQGSYSCSSTECLG*SSHQVQDMFESLQV Trigger: AACCTGTAGCGATTCAAACATATCCTGTACTTGGTGAGAAGATCACCCAAGACACTCTGTACTGGAACAACTATAAGACCCCTGTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS GCA 90 bp | TTGAGAGTACCGGCCATAAATGTGGATTCTCGAAGAAGCTGTGACTaGATAGTTATATGGAAGCTGAGGAGAAAAGTCTACTTTGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: LRVPAINVDSRRSCD*IVIWKLRRKVYFGH Trigger: GTGTCCAAAGTAGACTTTTCTCCTCAGCTTCCATATAACTATGCAGTCACAGCTTCTTCGAGAATCCACATTTATGGCCGGTACTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS TCA 90 bp | ATTCTTATTTGTCCGAGCATCGAATATCTTCACAGTATGATCGTATaGTCCTGTTACAAAAAGGTCTGGGTTCAGTTTGCTGGCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILICPSIEYLHSMIV*SCYKKVWVQFAGTA Trigger: GGCTGTGCCAGCAAACTGAACCCAGACCTTTTTGTAACAGGATCATACGATCATACTGTGAAGATATTCGATGCTCGGACAAATAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS CCA 90 bp | GCCATAAATGTGGATTCTCGAAGAAGCTGTGACTGCATAGTTATATaGAAGCTGAGGAGAAAAGTCTACTTTGGACACTGCACCAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: AINVDSRRSCDCIVI*KLRRKVYFGHCTKF Trigger: GAATTTGGTGCAGTGTCCAAAGTAGACTTTTCTCCTCAGCTTCCATATAACTATGCAGTCACAGCTTCTTCGAGAATCCACATTTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTTTCAGGGAATATAAAAACAACTCCTGAGCTGTGGTGGTGCACACCTTTAGGTTTTTACAGGCTCTaGAGAGTACCGGCCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IVSGNIKTTPELWWCTPLGFYRL*RVPAIN Trigger: ATTTATGGCCGGTACTCTCAAGAGCCTGTAAAAACC...TAAAGGTGTGCACCACCACAGCTCAGGAGTTGTTTTTATATTCCCTGAAACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTTTCAGGGAATATAAAAACAACTCCTGAGCTGTGGTGGTGCACACCTTTAACACTCAGTATTCCGTaGGTCATTCCTACAACTATC | + |
|
Preference number: 5 (lower is better) Translates to: IVSGNIKTTPELWWCTPLTLSIP*VIPTTI Trigger: GATAGTTGTAGGAATGACCAACGGAATACTGAGTGT...TAAAGGTGTGCACCACCACAGCTCAGGAGTTGTTTTTATATTCCCTGAAACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS TCA 90 bp | CAGAGAACATTCTTATTTGTCCGAGCATCGAATATCTTCACAGTATaGTCGTATGATCCTGTTACAAAAAGGTCTGGGTTCAGTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRTFLFVRASNIFTV*SYDPVTKRSGFSLL Trigger: CAGCAAACTGAACCCAGACCTTTTTGTAACAGGATCATACGATCATACTGTGAAGATATTCGATGCTCGGACAAATAAGAATGTTCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS GCA 90 bp | TGCATAGTTATATGGAAGCTGAGGAGAAAAGTCTACTTTGGACACTaGACCAAATTCCTTAATCTGAACAGGGGTCTTATAGTTGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CIVIWKLRRKVYFGH*TKFLNLNRGLIVVP Trigger: TGGAACAACTATAAGACCCCTGTTCAGATTAAGGAATTTGGTGCAGTGTCCAAAGTAGACTTTTCTCCTCAGCTTCCATATAACTATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS GCA 72 bp | GACTCTGTCTTCTCCTCTGGGAGTTCAGCGGGCACATaGTCCGGCACAGGGTCGCTGTCATTCCGTGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: DSVFSSGSSAGT*SGTGSLSFRVM Trigger: CATGACACGGAATGACAGCGACCCTGTGCCGGAGCATGTGCCCGCTGAACTCCCAGAGGAGAAGACAGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS CAA 72 bp | CGGGTAACCTCCTTCTCGTCCCGACCTGCAAGAGCATaGGCAAGGACGCCTCTCCGAGTCAGCTCCTTTATG | + |
|
Preference number: 6 (lower is better) Translates to: RVTSFSSRPARA*ARTPLRVSSFM Trigger: CATAAAGGAGCTGACTCGGAGAGGCGTCCTTGCCAATGCTCTTGCAGGTCGGGACGAGAAGGAGGTTACCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS CAA 90 bp | TTAAGGACCCGGGTAACCTCCTTCTCGTCCCGACCTGCAAGAGCATaGGCAAGGACGCCTCTCCGAGTCAGCTCCTTTATGATGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: LRTRVTSFSSRPARA*ARTPLRVSSFMMET Trigger: AGTTTCCATCATAAAGGAGCTGACTCGGAGAGGCGTCCTTGCCAATGCTCTTGCAGGTCGGGACGAGAAGGAGGTTACCCGGGTCCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS CAA 90 bp | AGGACTCTGTCGAGGGCCTGTGAGACCCGAAAGCTTTTCAGATCCTaGTCATACCCCTCTAGGTGCTTCTTTGCTGGCCTACTGACCATG | + |
|
Preference number: 6 (lower is better) Translates to: RTLSRACETRKLFRS*SYPSRCFFAGLLTM Trigger: CATGGTCAGTAGGCCAGCAAAGAAGCACCTAGAGGGGTATGACAAGGATCTGAAAAGCTTTCGGGTCTCACAGGCCCTCGACAGAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS GCA 72 bp | CCTCCTGAGGGGAAAAGCAGGACACTCTCCACTGGCTaGCCATGCTCCACACAGAGAACATTCTTATTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PPEGKSRTLSTG*PCSTQRTFLFV Trigger: GACAAATAAGAATGTTCTCTGTGTGGAGCATGGGCAGCCAGTGGAGAGTGTCCTGCTTTTCCCCTCAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS GCA 72 bp | TGCAGGCCTCCTCCTCCTCGGAAGAGACGTCTTCTTTaGTTCAGACTTCCGGTGTTTAACACTCAGTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRPPPPRKRRLL*FRLPVFNTQYS Trigger: GGAATACTGAGTGTTAAACACCGGAAGTCTGAAGCAAAGAAGACGTCTCTTCCGAGGAGGAGGAGGCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
||
| CDS CAA 90 bp | GCCTTCAAACTGCCTGAGGGGAGCCCTCCCATTTATATCAAAAAGTaGAACTACACCATCTTCACTGCCAGCAACGAGCAACTGACCATC | + |
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Preference number: 6 (lower is better) Translates to: AFKLPEGSPPIYIKK*NYTIFTASNEQLTI Trigger: GATGGTCAGTTGCTCGTTGCTGGCAGTGAAGATGGTGTAGTTCAACTTTTTGATATAAATGGGAGGGCTCCCCTCAGGCAGTTTGAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS TCA 72 bp | TGCCTGAGGGGAGCCCTCCCATTTATATCAAAAAGTTaGACTACACCATCTTCACTGCCAGCAACGAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: CLRGALPFISKS*TTPSSLPATSN Trigger: GTTGCTCGTTGCTGGCAGTGAAGATGGTGTAGTTCAACTTTTTGATATAAATGGGAGGGCTCCCCTCAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS GCA 72 bp | CGAAAGCTTTTCAGATCCTTGTCATACCCCTCTAGGTaGTTCTTTGCTGGCCTACTGACCATGATGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: RKLFRSLSYPSR*FFAGLLTMMSS Trigger: GGATGACATCATGGTCAGTAGGCCAGCAAAGAAGCACCTAGAGGGGTATGACAAGGATCTGAAAAGCTTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS CAA 72 bp | CTGCCTGAGGGGAGCCCTCCCATTTATATCAAAAAGTaGAACTACACCATCTTCACTGCCAGCAACGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LPEGSPPIYIKK*NYTIFTASNEQ Trigger: TTGCTCGTTGCTGGCAGTGAAGATGGTGTAGTTCAACTTTTTGATATAAATGGGAGGGCTCCCCTCAGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS CAA 90 bp | CTACAACTATCGTCTCATCTTGATGAGAGAGTGCCAGACTCAAGATaGAAGCTGCGTAGTCAAAGCTGTGGACGACTTTGTAGGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LQLSSHLDERVPDSR*KLRSQSCGRLCRRW Trigger: CCACCTCCTACAAAGTCGTCCACAGCTTTGACTACGCAGCTTCAATCTTGAGTCTGGCACTCTCTCATCAAGATGAGACGATAGTTGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS CAA 90 bp | CACTCTCCACTGGCTGCCCATGCTCCACACAGAGAACATTCTTATTaGTCCGAGCATCGAATATCTTCACAGTATGATCGTATGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: HSPLAAHAPHREHSY*SEHRISSQYDRMIL Trigger: CAGGATCATACGATCATACTGTGAAGATATTCGATGCTCGGACAAATAAGAATGTTCTCTGTGTGGAGCATGGGCAGCCAGTGGAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS TCA 72 bp | CGTCTCATCTTGATGAGAGAGTGCCAGACTCAAGATTaGAGCTGCGTAGTCAAAGCTGTGGACGACTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: RLILMRECQTQD*SCVVKAVDDFV Trigger: TACAAAGTCGTCCACAGCTTTGACTACGCAGCTTCAATCTTGAGTCTGGCACTCTCTCATCAAGATGAGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS CCA 72 bp | ATGATCCTGTTACAAAAAGGTCTGGGTTCAGTTTGCTaGCACAGCCGCACCTCACGTAATCAGAATGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: MILLQKGLGSVC*HSRTSRNQNVL Trigger: AAGAACATTCTGATTACGTGAGGTGCGGCTGTGCCAGCAAACTGAACCCAGACCTTTTTGTAACAGGATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS CAA 72 bp | CTGGCTGCCCATGCTCCACACAGAGAACATTCTTATTaGTCCGAGCATCGAATATCTTCACAGTATGATCGT | + |
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Preference number: 6 (lower is better) Translates to: LAAHAPHREHSY*SEHRISSQYDR Trigger: ACGATCATACTGTGAAGATATTCGATGCTCGGACAAATAAGAATGTTCTCTGTGTGGAGCATGGGCAGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS GCA 72 bp | CCGGCCATAAATGTGGATTCTCGAAGAAGCTGTGACTaGATAGTTATATGGAAGCTGAGGAGAAAAGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: PAINVDSRRSCD*IVIWKLRRKVY Trigger: GTAGACTTTTCTCCTCAGCTTCCATATAACTATGCAGTCACAGCTTCTTCGAGAATCCACATTTATGGCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS CCA 72 bp | GTGGATTCTCGAAGAAGCTGTGACTGCATAGTTATATaGAAGCTGAGGAGAAAAGTCTACTTTGGACACTGC | + |
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Preference number: 6 (lower is better) Translates to: VDSRRSCDCIVI*KLRRKVYFGHC Trigger: GCAGTGTCCAAAGTAGACTTTTCTCCTCAGCTTCCATATAACTATGCAGTCACAGCTTCTTCGAGAATCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS TCA 72 bp | AGTACCGGCCATAAATGTGGATTCTCGAAGAAGCTGTaGCTGCATAGTTATATGGAAGCTGAGGAGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: STGHKCGFSKKL*LHSYMEAEEKS Trigger: ACTTTTCTCCTCAGCTTCCATATAACTATGCAGTCACAGCTTCTTCGAGAATCCACATTTATGGCCGGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS CAA 72 bp | AACAGGGGTCTTATAGTTGTTCCAGTACAGAGTGTCTaGGGTGATCTTCTCACCAAGTACAGGATATGTTTG | + |
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Preference number: 6 (lower is better) Translates to: NRGLIVVPVQSV*GDLLTKYRICL Trigger: CAAACATATCCTGTACTTGGTGAGAAGATCACCCAAGACACTCTGTACTGGAACAACTATAAGACCCCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS CAA 90 bp | CTTAATCTGAACAGGGGTCTTATAGTTGTTCCAGTACAGAGTGTCTaGGGTGATCTTCTCACCAAGTACAGGATATGTTTGAATCGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LNLNRGLIVVPVQSV*GDLLTKYRICLNRY Trigger: GTAGCGATTCAAACATATCCTGTACTTGGTGAGAAGATCACCCAAGACACTCTGTACTGGAACAACTATAAGACCCCTGTTCAGATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS TCA 72 bp | TGTCCGAGCATCGAATATCTTCACAGTATGATCGTATaGTCCTGTTACAAAAAGGTCTGGGTTCAGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: CPSIEYLHSMIV*SCYKKVWVQFA Trigger: AGCAAACTGAACCCAGACCTTTTTGTAACAGGATCATACGATCATACTGTGAAGATATTCGATGCTCGGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS GCA 72 bp | CATTTATATCAAAAAGTTGAACTACACCATCTTCACTaGCAGCAACGAGCAACTGACCATCCTGTCGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: HLYQKVELHHLH*QQRATDHPVEK Trigger: CTTTTCGACAGGATGGTCAGTTGCTCGTTGCTGGCAGTGAAGATGGTGTAGTTCAACTTTTTGATATAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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| CDS TCA 72 bp | TTCTTATTTGTCCGAGCATCGAATATCTTCACAGTATaGTCGTATGATCCTGTTACAAAAAGGTCTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FLFVRASNIFTV*SYDPVTKRSGF Trigger: GAACCCAGACCTTTTTGTAACAGGATCATACGATCATACTGTGAAGATATTCGATGCTCGGACAAATAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040972.4 |
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