Pregenerated sensors for UTP14A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063785Ensembl transcript IDs: ENSMUST00000080713.5
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTTaGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: FLRYGLTTHTVLNQF*NSSCSIDHAEDTPQ Trigger: CTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| 3UTR CAA 90 bp | ATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTaGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: ISQIWLNYTHSVKPV*EFILQHRPCRGHSS Trigger: TGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| 3UTR CCA 72 bp | TATGGCTTAACTACACACACAGTGTTAAACCAGTTTTaGAATTCATCTTGCAGCATAGACCATGCAGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: YGLTTHTVLNQF*NSSCSIDHAED Trigger: GTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | AACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGCCCCCTCATCTTCACTaGCACTCAAGGGGTAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: NQFWNSSCSIDHAEDTPQPPHLH*HSRGSC Trigger: GCAACTACCCCTTGAGTGCCAGTGAAGATGAGGGGG...CTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | TACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGGACCCGCACCTGGTaGGCTGCCGCATGGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: YTHSVKPVLEFILQHRPCRTRTW*AAAWMF Trigger: AAACATCCATGCGGCAGCTCACCAGGTGCGGGTCCT...GCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | ACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACGTCTTTTCCTGGCGCTaGGCTTCAGGTTCATCCCGC | + |
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Preference number: 4 (lower is better) Translates to: TVLNQFWNSSCSIDHAEDVFSWR*ASGSSR Trigger: GCGGGATGAACCTGAAGCCCAGCGCCAGGAAAAGAC...GTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | ACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCACTGCTCCCCTTCTACTaGAGGTCTAGGGCGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: THTVLNQFWNSSCSIDHALLPFY*RSRALL Trigger: AAGGAGCGCCCTAGACCTTCAGTAGAAGGGGAGCAG...TGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | TTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTAGGCTCATCTTCCTCTaGGGCAGGTTCCTCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LNQFWNSSCSIDHAEDTPRLIFL*GRFLFP Trigger: TGGGAAGAGGAACCTGCCCCAGAGGAAGATGAGCCT...AGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | AACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGAGGGCGCTCCTTATTTaGAAGGCTGTCCTCTTTACC | + |
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Preference number: 4 (lower is better) Translates to: NQFWNSSCSIDHAEDTPQRALLI*KAVLFT Trigger: GGTAAAGAGGACAGCCTTCCAAATAAGGAGCGCCCT...CTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | CCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGATGCTTCCCGGTTCTTCTaGACAACAGAATCCCATTTG | + |
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Preference number: 4 (lower is better) Translates to: PVLEFILQHRPCRGHSSDASRFF*TTESHL Trigger: CAAATGGGATTCTGTTGTTCAGAAGAACCGGGAAGC...ATCTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | TTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTTTCTTCCCCTTGGAGTaGTTCTGTGGGTTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LNQFWNSSCSIDHAEDTPFFPLE*FCGFLL Trigger: GAGGAGGAACCCACAGAATCACTCCAAGGGGAAGAA...AGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | ACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACTTGGATTGCTCTGCATaGCAGGCACGTCAGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: TVLNQFWNSSCSIDHAEDLDCSA*QARQTL Trigger: CAAGGTCTGACGTGCCTGTCATGCAGAGCAATCCAA...GTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR GCA 90 bp | AAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCACTCTCTGACACAACTTaGAGCTTCTGGGTCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KPVLEFILQHRPCRGHSSLSDTT*SFWVSS Trigger: GGAACTGACCCAGAAGCTGCAAGTTGTGTCAGAGAG...TGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | CAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGATACAGATCCACAGCCTTTaGCTTATTGGCCTGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: QFWNSSCSIDHAEDTPQIQIHSL*LIGLDS Trigger: GCTATCCAGGCCAATAAGCCAAAGGCTGTGGATCTG...TATCTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | AATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTAGAGCTCGGGCCCTCTaGAGCTCTGCTCTGCGAATC | + |
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Preference number: 4 (lower is better) Translates to: NAFISQIWLNYTHSVKPVRARAL*SSALRI Trigger: GATTCGCAGAGCAGAGCTTCAGAGGGCCCGAGCTCT...AACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR GCA 90 bp | AAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAAAAAACCAGCTGCTCTaGTTCCCGGTTCTTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: KPVLEFILQHRPCRGHSSKNQLL*FPVLLN Trigger: GTTCAGAAGAACCGGGAAGCAGAGCAGCTGGTTTTT...TGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR GCA 90 bp | CACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGATTCTCTCTGGCCTCTaGAGCAAGAGAGGCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: HTVLNQFWNSSCSIDHAEILSGL*SKRGSS Trigger: AGATGAGCCTCTCTTGCTGCAGAGGCCAGAGAGAAT...CTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | ACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACTTTTCAGGAAACTCATaGGCTGCAGACTCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TVLNQFWNSSCSIDHAEDFSGNS*AADSGS Trigger: GCTGCCTGAGTCTGCAGCCCATGAGTTTCCTGAAAA...GTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | TACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGTTCGCATTCTCTCTaGCCTCTGCAGCAAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: YTHSVKPVLEFILQHRPCSSHSL*PLQQER Trigger: CCTCTCTTGCTGCAGAGGCCAGAGAGAATGCGAACT...GCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | ACTACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATTGCTCTTGCATAGCTTaGCGGGCCTCCAGGTCATAT | + |
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Preference number: 4 (lower is better) Translates to: TTHTVLNQFWNSSCSIDHCSCIA*RASRSY Trigger: ATATGACCTGGAGGCCCGCCAAGCTATGCAAGAGCA...ATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | CCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGATACAACTTGCAGCTTCTaGGTCAGTTCCTTGTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: PVLEFILQHRPCRGHSSDTTCSF*VSSLFL Trigger: TAAGAACAAGGAACTGACCCAGAAGCTGCAAGTTGT...ATCTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | ACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACTCTTGTTCTTCCCCTTaGAGTGATTCTGTGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TVLNQFWNSSCSIDHAEDSCSSP*SDSVGS Trigger: GGAACCCACAGAATCACTCCAAGGGGAAGAACAAGA...GTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | CAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGATATCAACCTCTCTTTTGTaGAGAGGTAATTCCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QFWNSSCSIDHAEDTPQISTSLL*RGNSRV Trigger: GACTCTGGAATTACCTCTTCACAAAAGAGAGGTTGA...TATCTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR GCA 90 bp | CCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGATCACTCAAGGGGTAGTTaGTTGTCAAATCCATTAGAT | + |
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Preference number: 4 (lower is better) Translates to: PVLEFILQHRPCRGHSSDHSRGS*LSNPLD Trigger: ATCTAATGGATTTGACAAGCAACTACCCCTTGAGTG...ATCTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR GCA 90 bp | AAAATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGGGGTTCCTCCTCACCTaGTCCCCTTCTACTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: KMPLFLRYGLTTHTVLNQGFLLT*SPSTEG Trigger: ACCTTCAGTAGAAGGGGAGCAGGTGAGGAGGAACCC...CTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | GCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTTGCTTGGAGTGATTCTGTaGGTTCCTCCTCACCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: AFISQIWLNYTHSVKPVLLGVIL*VPPHLL Trigger: GAGCAGGTGAGGAGGAACCCACAGAATCACTCCAAG...CAAAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| 3UTR CAA 72 bp | TACACACACAGTGTTAAACCAGTTTTGGAATTCATCTaGCAGCATAGACCATGCAGAGGACACTCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: YTHSVKPVLEFI*QHRPCRGHSSD Trigger: ATCTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | CACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGTACTCAGTTGCTTTTTaGCAGCAGCCAATGATGATG | + |
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Preference number: 4 (lower is better) Translates to: HTVLNQFWNSSCSIDHAEYSVAF*QQPMMM Trigger: CATCATCATTGGCTGCTGTCAAAAAGCAACTGAGTA...CTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | ACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACTTTGGAGAGGGTTTGTaGAGTTTTACTGAATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TVLNQFWNSSCSIDHAEDFGEGL*SFTECH Trigger: GTGGCATTCAGTAAAACTTCACAAACCCTCTCCAAA...GTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR GCA 90 bp | AAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGATCTCATTTTCTTTTaGATCACGACTGCAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: KPVLEFILQHRPCRGHSSDLIFF*ITTATP Trigger: AGGAGTTGCAGTCGTGATGCAAAAGAAAATGAGATC...TGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR GCA 90 bp | ACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCATTGCTTTTGGTCTCTTaGCCCTTCATCTTCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: THTVLNQFWNSSCSIDHALLLVS*PFIFQL Trigger: GAGTTGGAAGATGAAGGGGCAAGAGACCAAAAGCAA...TGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | ATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTTTCTTGGTTACCCAGTaGCTCAGCAGCCTGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: MPLFLRYGLTTHTVLNQFFLVTQ*LSSLVE Trigger: CTCAACCAGGCTGCTGAGCCACTGGGTAACCAAGAA...AAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR TCA 90 bp | TACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCGGAGGTTCTGTAGACTaGTCATTTGTTCCTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: YTHSVKPVLEFILQHRPCGGSVD*SFVPSC Trigger: ACAAGAAGGAACAAATGATCAGTCTACAGAACCTCC...GCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR GCA 90 bp | ACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACTTGACTCTACTCAGTTaGTTTTTGACAGCAGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: TVLNQFWNSSCSIDHAEDLTLLS*FLTAAN Trigger: ATTGGCTGCTGTCAAAAAGCAACTGAGTAGAGTCAA...GTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | AAAATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGATTAGATCATCCTGCTaGCTCAAAGCCAGAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KMPLFLRYGLTTHTVLNQIRSSC*LKARRP Trigger: GGGCCTTCTGGCTTTGAGCCAGCAGGATGATCTAAT...CTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | AAAATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGAACTTCCTGTTCCAGTaGAGTTCTCGCCTTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: KMPLFLRYGLTTHTVLNQNFLFQ*SSRLPL Trigger: GAGTGGAAGGCGAGAACTCCACTGGAACAGGAAGTT...CTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | CACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGATCTTCCTCTGCCACTaGTTTGTCATTTTCCTCATT | + |
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Preference number: 4 (lower is better) Translates to: HTVLNQFWNSSCSIDHAEIFLCH*FVIFLI Trigger: AATGAGGAAAATGACAAACCAGTGGCAGAGGAAGAT...CTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | TACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCTTTGGCTTATTGGCCTaGATAGCTTCTCTCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: YTHSVKPVLEFILQHRPCFGLLA*IASLFS Trigger: AGAGAAGAGAGAAGCTATCCAGGCCAATAAGCCAAA...GCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR GCA 90 bp | AATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTGTTTTGGATTGCTCTaGATGACAGGCACGTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: NAFISQIWLNYTHSVKPVCFGLL*MTGTSD Trigger: GTCTGACGTGCCTGTCATGCAGAGCAATCCAAAACA...AACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | ACTACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGAAACACATGTTCCATaGGAGCAAAAGAAGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: TTHTVLNQFWNSSCSIDHETHVP*EQKKMA Trigger: AGCCATCTTCTTTTGCTCCCATGGAACATGTGTTTC...ATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| 3UTR CAA 72 bp | ATATGGCTTAACTACACACACAGTGTTAAACCAGTTTaGGAATTCATCTTGCAGCATAGACCATGCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: IWLNYTHSVKPV*EFILQHRPCRG Trigger: TCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | ACTACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATTGTTCAGAGTCAGCCTaGATCTCATTTTCTTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: TTHTVLNQFWNSSCSIDHCSESA*ISFSFA Trigger: TGCAAAAGAAAATGAGATCCAGGCTGACTCTGAACA...ATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | GCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTTGGAATCTTTTGTTTCTTaGTTACCCAGTGGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AFISQIWLNYTHSVKPVLESFVS*LPSGSA Trigger: TGCTGAGCCACTGGGTAACCAAGAAACAAAAGATTC...CAAAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | ACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCATTTATCATTTGCTTTTaGTCTCTTGCCCCTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: THTVLNQFWNSSCSIDHAFIICF*SLAPSS Trigger: AGATGAAGGGGCAAGAGACCAAAAGCAAATGATAAA...TGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | AAAATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTGGAGTGTTGTTTTaGATTGCTCTGCATGACAGG | + |
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Preference number: 4 (lower is better) Translates to: KMPLFLRYGLTTHTVLNQFGVLF*IALHDR Trigger: CCTGTCATGCAGAGCAATCCAAAACAACACTCCAAA...CTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CCA 90 bp | ATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTCAACAGAATCCCATTTaGAGAGGGTTTGTGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: MPLFLRYGLTTHTVLNQFQQNPI*RGFVKF Trigger: AAACTTCACAAACCCTCTCCAAATGGGATTCTGTTG...AAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS GCA 90 bp | AGACTCAGGCAGCTGTTCAGAGTCAGCCTGGATCTCATTTTCTTTTaGATCACGACTGCAACTCCTGAGCATCCACGGATTGGGTCCATC | + |
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Preference number: 5 (lower is better) Translates to: RLRQLFRVSLDLIFF*ITTATPEHPRIGSI Trigger: GATGGACCCAATCCGTGGATGCTCAGGAGTTGCAGTCGTGATGCAAAAGAAAATGAGATCCAGGCTGACTCTGAACAGCTGCCTGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CCA 90 bp | GGAAACTCATGGGCTGCAGACTCAGGCAGCTGTTCAGAGTCAGCCTaGATCTCATTTTCTTTTGCATCACGACTGCAACTCCTGAGCATC | + |
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Preference number: 5 (lower is better) Translates to: GNSWAADSGSCSESA*ISFSFASRLQLLSI Trigger: GATGCTCAGGAGTTGCAGTCGTGATGCAAAAGAAAATGAGATCCAGGCTGACTCTGAACAGCTGCCTGAGTCTGCAGCCCATGAGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CCA 90 bp | GGAGTGTTGTTTTGGATTGCTCTGCATGACAGGCACGTCAGACCTTaGGGAAGATCGGCAATCCACATCCTCTGCTGTTATGGGTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: GVLFWIALHDRHVRP*GRSAIHILCCYGFD Trigger: ATCAAACCCATAACAGCAGAGGATGTGGATTGCCGATCTTCCCCAAGGTCTGACGTGCCTGTCATGCAGAGCAATCCAAAACAACACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | ACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACCCAACTCCTCTACTGTaGTCGGAAGCGCCAGTGACG | + |
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Preference number: 5 (lower is better) Translates to: TVLNQFWNSSCSIDHAEDPTPLL*SEAPVT Trigger: CGTCACTGGCGCTTCCGACAACAGTAGAGGAGTTGG...GTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | AACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGAGAATCTTTTGTTTCTaGGTTACCCAGTGGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: NQFWNSSCSIDHAEDTPQRIFCF*VTQWLS Trigger: GCTGAGCCACTGGGTAACCAAGAAACAAAAGATTCT...CTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | AATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTCTGCTCTTGCATAGCTaGGCGGGCCTCCAGGTCATA | + |
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Preference number: 5 (lower is better) Translates to: NAFISQIWLNYTHSVKPVLLLHS*AGLQVI Trigger: TATGACCTGGAGGCCCGCCAAGCTATGCAAGAGCAG...AACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | CACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGTTCTGGGTCAGTTCCTaGTTCTTAGCCAACTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: HTVLNQFWNSSCSIDHAEFWVSS*FLANCS Trigger: AGAGCAGTTGGCTAAGAACAAGGAACTGACCCAGAA...CTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | AACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACACTCCTCAGTCAAGGGGTAGTTGCTaGTCAAATCCATTAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: NQFWNSSCSIDHAEDTPQSRGSC*SNPLDH Trigger: ATGATCTAATGGATTTGACAAGCAACTACCCCTTGA...CTGAGGAGTGTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | CACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGAGCTTCCTTTATCATTaGCTTTTGGTCTCTTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: HTVLNQFWNSSCSIDHAESFLYH*LLVSCP Trigger: GGGGCAAGAGACCAAAAGCAAATGATAAAGGAAGCT...CTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | ACTACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATTCTTTTAGGGCTTTCTaGGCCTTTCCCTTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: TTHTVLNQFWNSSCSIDHSFRAF*AFPFFT Trigger: TGTGAAGAAGGGAAAGGCCAAGAAAGCCCTAAAAGA...ATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | AATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTGAGTGTTGTTTTGGATaGCTCTGCATGACAGGCACG | + |
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Preference number: 5 (lower is better) Translates to: NAFISQIWLNYTHSVKPVECCFG*LCMTGT Trigger: CGTGCCTGTCATGCAGAGCAATCCAAAACAACACTC...AACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | ACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATGCAGAGGACAGAGCTTTTCTTCCGTaGTTTTTGATGTTTGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: TVLNQFWNSSCSIDHAEDRAFLP*FLMFGV Trigger: CACTCCAAACATCAAAAACAACGGAAGAAAAGCTCT...GTCCTCTGCATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | ACTACACACACAGTGTTAAACCAGTTTTGGAATTCATCTTGCAGCATAGACCATCTTTATCATTTGCTTTaGGTCTCTTGCCCCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: TTHTVLNQFWNSSCSIDHLYHLL*VSCPFI Trigger: GATGAAGGGGCAAGAGACCAAAAGCAAATGATAAAG...ATGGTCTATGCTGCAAGATGAATTCCAAAACTGGTTTAACACTGTGTGTGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | GCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTTGTTTGACTCTACTCAGTaGCTTTTTGACAGCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: AFISQIWLNYTHSVKPVLFDSTQ*LFDSSQ Trigger: TTGGCTGCTGTCAAAAAGCAACTGAGTAGAGTCAAA...CAAAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | ATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTGGATCTCATTTTCTTTaGCATCACGACTGCAACTCC | + |
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Preference number: 5 (lower is better) Translates to: MPLFLRYGLTTHTVLNQFGSHFL*HHDCNS Trigger: GGAGTTGCAGTCGTGATGCAAAAGAAAATGAGATCC...AAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | ATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTTTTTTGCTTTTGGTCTCTaGCCCCTTCATCTTCCAACT | + |
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Preference number: 5 (lower is better) Translates to: MPLFLRYGLTTHTVLNQFFAFGL*PLHLPT Trigger: AGTTGGAAGATGAAGGGGCAAGAGACCAAAAGCAAA...AAACTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | AAAATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGCTACTCAGTTGCTTTTaGACAGCAGCCAATGATGAT | + |
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Preference number: 5 (lower is better) Translates to: KMPLFLRYGLTTHTVLNQLLSCF*TAANDD Trigger: ATCATCATTGGCTGCTGTCAAAAAGCAACTGAGTAG...CTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS-3UTR CAA 90 bp | AAAATGCCTTTATTTCTCAGATATGGCTTAACTACACACACAGTGTTAAACCAGTCCTCTGCCACTGGTTaGTCATTTTCCTCATTTTCA | + |
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Preference number: 5 (lower is better) Translates to: KMPLFLRYGLTTHTVLNQSSATG*SFSSFS Trigger: TGAAAATGAGGAAAATGACAAACCAGTGGCAGAGGA...CTGGTTTAACACTGTGTGTGTAGTTAAGCCATATCTGAGAAATAAAGGCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CAA 72 bp | GGTCTCTTGCCCCTTCATCTTCCAACTCCTCTACTGTaGTCGGAAGCGCCAGTGACGTCACAGAGGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLLPLHLPTPLL*SEAPVTSQREF Trigger: GAACTCCCTCTGTGACGTCACTGGCGCTTCCGACAACAGTAGAGGAGTTGGAAGATGAAGGGGCAAGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS GCA 72 bp | GGTGAACGGATATGGAAGGACCCGCACCTGGTGAGCTaGCGCATGGATGTTTCGCTTCTCACTGATAATCAC | + |
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Preference number: 6 (lower is better) Translates to: GERIWKDPHLVS*RMDVSLLTDNH Trigger: GTGATTATCAGTGAGAAGCGAAACATCCATGCGGCAGCTCACCAGGTGCGGGTCCTTCCATATCCGTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CCA 72 bp | TGGGCTGCAGACTCAGGCAGCTGTTCAGAGTCAGCCTaGATCTCATTTTCTTTTGCATCACGACTGCAACTC | + |
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Preference number: 6 (lower is better) Translates to: WAADSGSCSESA*ISFSFASRLQL Trigger: GAGTTGCAGTCGTGATGCAAAAGAAAATGAGATCCAGGCTGACTCTGAACAGCTGCCTGAGTCTGCAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CAA 72 bp | TTTGCATCACGACTGCAACTCCTGAGCATCCACGGATaGGGTCCATCAGCCGTCTTCTGTACCTCATTCACT | + |
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Preference number: 6 (lower is better) Translates to: FASRLQLLSIHG*GPSAVFCTSFT Trigger: AGTGAATGAGGTACAGAAGACGGCTGATGGACCCAATCCGTGGATGCTCAGGAGTTGCAGTCGTGATGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS TCA 72 bp | GGATCTCATTTTCTTTTGCATCACGACTGCAACTCCTaGGCATCCACGGATTGGGTCCATCAGCCGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSHFLLHHDCNS*ASTDWVHQPSS Trigger: AGAAGACGGCTGATGGACCCAATCCGTGGATGCTCAGGAGTTGCAGTCGTGATGCAAAAGAAAATGAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS GCA 72 bp | TGTCCCCCTCATCTTCACTGGCACTCAAGGGGTAGTTaGTTGTCAAATCCATTAGATCATCCTGCTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CPPHLHWHSRGS*LSNPLDHPAGS Trigger: TGAGCCAGCAGGATGATCTAATGGATTTGACAAGCAACTACCCCTTGAGTGCCAGTGAAGATGAGGGGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CCA 72 bp | TTTTGGATTGCTCTGCATGACAGGCACGTCAGACCTTaGGGAAGATCGGCAATCCACATCCTCTGCTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: FWIALHDRHVRP*GRSAIHILCCY Trigger: ATAACAGCAGAGGATGTGGATTGCCGATCTTCCCCAAGGTCTGACGTGCCTGTCATGCAGAGCAATCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CAA 72 bp | CCCCCTCATCTTCACTGGCACTCAAGGGGTAGTTGCTaGTCAAATCCATTAGATCATCCTGCTGGCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PPHLHWHSRGSC*SNPLDHPAGSK Trigger: CTTTGAGCCAGCAGGATGATCTAATGGATTTGACAAGCAACTACCCCTTGAGTGCCAGTGAAGATGAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS GCA 72 bp | CAGCTGTTCAGAGTCAGCCTGGATCTCATTTTCTTTTaGATCACGACTGCAACTCCTGAGCATCCACGGATT | + |
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Preference number: 6 (lower is better) Translates to: QLFRVSLDLIFF*ITTATPEHPRI Trigger: AATCCGTGGATGCTCAGGAGTTGCAGTCGTGATGCAAAAGAAAATGAGATCCAGGCTGACTCTGAACAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CCA 72 bp | GAGTTCTCGCCTTCCACTCACGAAACACATGTTCCATaGGAGCAAAAGAAGATGGCTCCTTCTCTAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: EFSPSTHETHVP*EQKKMAPSLEE Trigger: TTCCTCTAGAGAAGGAGCCATCTTCTTTTGCTCCCATGGAACATGTGTTTCGTGAGTGGAAGGCGAGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CCA 72 bp | ACTGGTTTGTCATTTTCCTCATTTTCAGGAAACTCATaGGCTGCAGACTCAGGCAGCTGTTCAGAGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TGLSFSSFSGNS*AADSGSCSESA Trigger: GGCTGACTCTGAACAGCTGCCTGAGTCTGCAGCCCATGAGTTTCCTGAAAATGAGGAAAATGACAAACCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CAA 90 bp | TCATTTTCTTTTGCATCACGACTGCAACTCCTGAGCATCCACGGATaGGGTCCATCAGCCGTCTTCTGTACCTCATTCACTATGTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SFSFASRLQLLSIHG*GPSAVFCTSFTMSG Trigger: TCCTGACATAGTGAATGAGGTACAGAAGACGGCTGATGGACCCAATCCGTGGATGCTCAGGAGTTGCAGTCGTGATGCAAAAGAAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS TCA 72 bp | TTTGATGTTTGGAGTGTTGTTTTGGATTGCTCTGCATaGCAGGCACGTCAGACCTTGGGGAAGATCGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: FDVWSVVLDCSA*QARQTLGKIGN Trigger: ATTGCCGATCTTCCCCAAGGTCTGACGTGCCTGTCATGCAGAGCAATCCAAAACAACACTCCAAACATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS CCA 72 bp | TTTCTTCCGTTGTTTTTGATGTTTGGAGTGTTGTTTTaGATTGCTCTGCATGACAGGCACGTCAGACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: FLPLFLMFGVLF*IALHDRHVRPW Trigger: CCAAGGTCTGACGTGCCTGTCATGCAGAGCAATCCAAAACAACACTCCAAACATCAAAAACAACGGAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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| CDS TCA 72 bp | GCCACTTCTCTGTGGATCTGTTCAACCTCTCTTTTGTaGAGAGGTAATTCCAGAGTCTTCTTCGATTTGACT | + |
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Preference number: 6 (lower is better) Translates to: ATSLWICSTSLL*RGNSRVFFDLT Trigger: AGTCAAATCGAAGAAGACTCTGGAATTACCTCTTCACAAAAGAGAGGTTGAACAGATCCACAGAGAAGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080713.5 |
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