Pregenerated sensors for UTP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028907Ensembl transcript IDs: ENSMUST00000030738.8
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCGAGTGCTGGGACCACTGCCTGGCTGCTTTACTATTTT | + |
Preference number: 1 (lower is better) Translates to: LCRPGWPRTQKSACL*LPSAGTTAWLLYYF Trigger: AAAATAGTAAAGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
3UTR-3UTR CCA 90 bp | AAAAACCGATGTATAGCTCTCCCAAATGGTGAACATAAACCTGCCCTTCACAGCCTGCCTCCCGAGTGCTaGGACCACTGCCTGGCTGCT | + |
Preference number: 2 (lower is better) Translates to: KNRCIALPNGEHKPALHSLPPEC*DHCLAA Trigger: AGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAG...GCTGTGAAGGGCAGGTTTATGTTCACCATTTGGGAGAGCTATACATCGGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
3UTR-3UTR CCA 90 bp | AAAAACCGATGTATAGCTCTCCCAAATGGTGAACATAAACCTGCCCTTCACAGCTTCTCTGTATACCCCTaGCTGTCCTGGAACTCACTC | + |
Preference number: 2 (lower is better) Translates to: KNRCIALPNGEHKPALHSFSVYP*LSWNSL Trigger: GAGTGAGTTCCAGGACAGCCAGGGGTATACAGAGAA...GCTGTGAAGGGCAGGTTTATGTTCACCATTTGGGAGAGCTATACATCGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCGAGTGCTGGGACCACTGCCTGGCTGCTT | + |
Preference number: 3 (lower is better) Translates to: PGWPRTQKSACL*LPSAGTTAWLL Trigger: AAGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
3UTR GCA 72 bp | TCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTaGTGGGACCACTGCCTGGCTGCTTTACTATTTTCA | + |
Preference number: 3 (lower is better) Translates to: SNSEIRLPLPPE*WDHCLAALLFS Trigger: TGAAAATAGTAAAGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
3UTR CCA 72 bp | GCCTGCCTCTGCCTCCCGAGTGCTGGGACCACTGCCTaGCTGCTTTACTATTTTCATAGAAAGACATCAAGT | + |
Preference number: 3 (lower is better) Translates to: ACLCLPSAGTTA*LLYYFHRKTSS Trigger: ACTTGATGTCTTTCTATGAAAATAGTAAAGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAGAGGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
3UTR GCA 72 bp | GCCTCTGCCTCCCGAGTGCTGGGACCACTGCCTGGCTaGTTTACTATTTTCATAGAAAGACATCAAGTCTCA | + |
Preference number: 3 (lower is better) Translates to: ASASRVLGPLPG*FTIFIERHQVS Trigger: TGAGACTTGATGTCTTTCTATGAAAATAGTAAAGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR GCA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGACCACTGCCTGGCTGCTTTACTATTTTCATTCTCGGTGTTCCCGCTaGCGGGTCTTGGCTGCCTTG | + |
Preference number: 4 (lower is better) Translates to: CLCLPSAGTTAWLLYYFHSRCSR*RVLAAL Trigger: CAAGGCAGCCAAGACCCGGCAGCGGGAACACCGAGA...ATGAAAATAGTAAAGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR GCA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGACCACTGCCTGGCTGCTTTACTATTTTCATCTCATGAGCTTCAGCTaGTCTGCTGTCACTTCTTCC | + |
Preference number: 4 (lower is better) Translates to: CLCLPSAGTTAWLLYYFHLMSFS*SAVTSS Trigger: GGAAGAAGTGACAGCAGAGCAGCTGAAGCTCATGAG...ATGAAAATAGTAAAGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR GCA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGACCACTGCCTGGCTGCTTTACTATTTTCATGAGCTTCAGCTGCTCTaGTGTCACTTCTTCCTTGTT | + |
Preference number: 4 (lower is better) Translates to: CLCLPSAGTTAWLLYYFHELQLL*CHFFLV Trigger: AACAAGGAAGAAGTGACAGCAGAGCAGCTGAAGCTC...ATGAAAATAGTAAAGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR TCA 90 bp | AACAAAAACCGATGTATAGCTCTCCCAAATGGTGAACATAAACCTGCCCTTCACCCTTGGCTATCCGCTTaGGTCCAGTCTGAGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: NKNRCIALPNGEHKPALHPWLSA*VQSEGW Trigger: CCACCCCTCAGACTGGACTCAAGCGGATAGCCAAGG...GTGAAGGGCAGGTTTATGTTCACCATTTGGGAGAGCTATACATCGGTTTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR CCA 90 bp | AGAAAGACATCAAGTCTCAGGTCGAAAATAAGTCATGATTACAAAACAGGAAGACCCGCTGCCGGGTCTTaGCTGCCTTGCGAAAAGCCG | + |
Preference number: 4 (lower is better) Translates to: RKTSSLRSKISHDYKTGRPAAGS*LPCEKP Trigger: CGGCTTTTCGCAAGGCAGCCAAGACCCGGCAGCGGG...TCTTCCTGTTTTGTAATCATGACTTATTTTCGACCTGAGACTTGATGTCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR CCA 90 bp | AACAAAAACCGATGTATAGCTCTCCCAAATGGTGAACATAAACCTGCCCTTCACGTCCAGTCTGAGGGGTaGCTCCTTTCACTCTCTCCT | + |
Preference number: 4 (lower is better) Translates to: NKNRCIALPNGEHKPALHVQSEG*LLSLSP Trigger: AGGAGAGAGTGAAAGGAGCCACCCCTCAGACTGGAC...GTGAAGGGCAGGTTTATGTTCACCATTTGGGAGAGCTATACATCGGTTTTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR GCA 90 bp | AGAAAGACATCAAGTCTCAGGTCGAAAATAAGTCATGATTACAAAACAGGAAGACTGCCGGGTCTTGGCTaGCTTGCGAAAAGCCGCCGA | + |
Preference number: 4 (lower is better) Translates to: RKTSSLRSKISHDYKTGRLPGLG*LAKSRR Trigger: TCGGCGGCTTTTCGCAAGGCAGCCAAGACCCGGCAG...TCTTCCTGTTTTGTAATCATGACTTATTTTCGACCTGAGACTTGATGTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR CCA 90 bp | AAAAACCGATGTATAGCTCTCCCAAATGGTGAACATAAACCTGCCCTTCACAGCTTCTGTTGCTTCCCCTaGAAATCCAGCAGATGGAGC | + |
Preference number: 4 (lower is better) Translates to: KNRCIALPNGEHKPALHSFCCFP*KSSRWS Trigger: GCTCCATCTGCTGGATTTCCAGGGGAAGCAACAGAA...GCTGTGAAGGGCAGGTTTATGTTCACCATTTGGGAGAGCTATACATCGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR CCA 90 bp | AAAAACCGATGTATAGCTCTCCCAAATGGTGAACATAAACCTGCCCTTCACAGCCTCCATCCTGGAGCTTaGCCCGAGTCATTTTATAGT | + |
Preference number: 4 (lower is better) Translates to: KNRCIALPNGEHKPALHSLHPGA*PESFYS Trigger: ACTATAAAATGACTCGGGCCAAGCTCCAGGATGGAG...GCTGTGAAGGGCAGGTTTATGTTCACCATTTGGGAGAGCTATACATCGGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR TCA 90 bp | AAGACATCAAGTCTCAGGTCGAAAATAAGTCATGATTACAAAACAGGAAGACCATGTCCTGAGTTCTCATaGGCTTCAGCTGCTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: KTSSLRSKISHDYKTGRPCPEFS*ASAALL Trigger: CAGCAGAGCAGCTGAAGCTCATGAGAACTCAGGACA...TGGTCTTCCTGTTTTGTAATCATGACTTATTTTCGACCTGAGACTTGATGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR GCA 90 bp | AAGACATCAAGTCTCAGGTCGAAAATAAGTCATGATTACAAAACAGGAAGACCAACGTGCTTCTTCTGTTaGTTCCCCTGGAAATCCAGC | + |
Preference number: 4 (lower is better) Translates to: KTSSLRSKISHDYKTGRPTCFFC*FPWKSS Trigger: GCTGGATTTCCAGGGGAAGCAACAGAAGAAGCACGT...TGGTCTTCCTGTTTTGTAATCATGACTTATTTTCGACCTGAGACTTGATGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR CCA 90 bp | CTGCTAGGGATAAATACACTGTTCTTCAATACTGAGAAGGAAATGTGTTCATCTAGGTCTTTGCGTGTCTaGATTTTCTGGGCAACAACG | + |
Preference number: 4 (lower is better) Translates to: LLGINTLFFNTEKEMCSSRSLRV*IFWATT Trigger: CGTTGTTGCCCAGAAAATCCAGACACGCAAAGACCT...AGATGAACACATTTCCTTCTCAGTATTGAAGAACAGTGTATTTATCCCTAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR TCA 90 bp | AACAAAAACCGATGTATAGCTCTCCCAAATGGTGAACATAAACCTGCCCTTCACCAGCAGATGGAGCTCTaGTTTCAATCTTTCAATTTT | + |
Preference number: 4 (lower is better) Translates to: NKNRCIALPNGEHKPALHQQMEL*FQSFNF Trigger: AAAATTGAAAGATTGAAATCAGAGCTCCATCTGCTG...GTGAAGGGCAGGTTTATGTTCACCATTTGGGAGAGCTATACATCGGTTTTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR TCA 90 bp | CTGCTAGGGATAAATACACTGTTCTTCAATACTGAGAAGGAAATGTGTTCATCTTTCTCTTTGAAAATGTaGACTCCATCCTGGAGCTTG | + |
Preference number: 4 (lower is better) Translates to: LLGINTLFFNTEKEMCSSFSLKM*TPSWSL Trigger: CAAGCTCCAGGATGGAGTTCACATTTTCAAAGAGAA...AGATGAACACATTTCCTTCTCAGTATTGAAGAACAGTGTATTTATCCCTAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR TCA 90 bp | CTGCTAGGGATAAATACACTGTTCTTCAATACTGAGAAGGAAATGTGTTCATCTTTCACCTTCACCTTCTaGGTTTTATCCATGAGGTCT | + |
Preference number: 4 (lower is better) Translates to: LLGINTLFFNTEKEMCSSFTFTF*VLSMRS Trigger: AGACCTCATGGATAAAACTCAGAAGGTGAAGGTGAA...AGATGAACACATTTCCTTCTCAGTATTGAAGAACAGTGTATTTATCCCTAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR GCA 90 bp | AGAAAGACATCAAGTCTCAGGTCGAAAATAAGTCATGATTACAAAACAGGAAGAGTCAAACAGTCATACTaGTTCTGTCGTTCCTTGGCT | + |
Preference number: 4 (lower is better) Translates to: RKTSSLRSKISHDYKTGRVKQSY*FCRSLA Trigger: AGCCAAGGAACGACAGAAGCAGTATGACTGTTTGAC...TCTTCCTGTTTTGTAATCATGACTTATTTTCGACCTGAGACTTGATGTCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR TCA 90 bp | AGAAAGACATCAAGTCTCAGGTCGAAAATAAGTCATGATTACAAAACAGGAAGACTTCCTTGTTCTCTTTaGAAATGTGAACTCCATCCT | + |
Preference number: 4 (lower is better) Translates to: RKTSSLRSKISHDYKTGRLPCSL*KCELHP Trigger: AGGATGGAGTTCACATTTTCAAAGAGAACAAGGAAG...TCTTCCTGTTTTGTAATCATGACTTATTTTCGACCTGAGACTTGATGTCTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR CCA 90 bp | CATAGAAAGACATCAAGTCTCAGGTCGAAAATAAGTCATGATTACAAAACAGGATGGAAATCCAGCAGATaGAGCTCTGATTTCAATCTT | + |
Preference number: 4 (lower is better) Translates to: HRKTSSLRSKISHDYKTGWKSSR*SSDFNL Trigger: AAGATTGAAATCAGAGCTCCATCTGCTGGATTTCCA...TCCTGTTTTGTAATCATGACTTATTTTCGACCTGAGACTTGATGTCTTTCTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR CCA 90 bp | AGAAAGACATCAAGTCTCAGGTCGAAAATAAGTCATGATTACAAAACAGGAAGAGAATCTGTAAATAGCTaGGGAGTTCACTGTTTCTTT | + |
Preference number: 4 (lower is better) Translates to: RKTSSLRSKISHDYKTGRESVNS*GVHCFF Trigger: AAAGAAACAGTGAACTCCCCAGCTATTTACAGATTC...TCTTCCTGTTTTGTAATCATGACTTATTTTCGACCTGAGACTTGATGTCTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR CAA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGACCACTGCCTGGCTGCTTTACTATTTTCATCACGTGCTTCTTCTGTaGCTTCCCCTGGAAATCCAG | + |
Preference number: 5 (lower is better) Translates to: CLCLPSAGTTAWLLYYFHHVLLL*LPLEIQ Trigger: CTGGATTTCCAGGGGAAGCAACAGAAGAAGCACGTG...ATGAAAATAGTAAAGCAGCCAGGCAGTGGTCCCAGCACTCGGGAGGCAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS TCA 90 bp | GCGTCAAACAGTCATACTGCTTCTGTCGTTCCTTGGCTATCCGCTTaGGTCCAGTCTGAGGGGTGGCTCCTTTCACTCTCTCCTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: ASNSHTASVVPWLSA*VQSEGWLLSLSPSV Trigger: TACAGAAGGAGAGAGTGAAAGGAGCCACCCCTCAGACTGGACTCAAGCGGATAGCCAAGGAACGACAGAAGCAGTATGACTGTTTGACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS GCA 90 bp | ATGAGGTCTTTGCGTGTCTGGATTTTCTGGGCAACAACGAACAGCTaGTTCTCCCGCTCGATGCGCTGCGTCAAACAGTCATACTGCTTC | + |
Preference number: 5 (lower is better) Translates to: MRSLRVWIFWATTNS*FSRSMRCVKQSYCF Trigger: GAAGCAGTATGACTGTTTGACGCAGCGCATCGAGCGGGAGAAGCAGCTGTTCGTTGTTGCCCAGAAAATCCAGACACGCAAAGACCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS-3UTR CAA 90 bp | CATAGAAAGACATCAAGTCTCAGGTCGAAAATAAGTCATGATTACAAAACAGGATCCCGCTGCCGGGTCTaGGCTGCCTTGCGAAAAGCC | + |
Preference number: 5 (lower is better) Translates to: HRKTSSLRSKISHDYKTGSRCRV*AALRKA Trigger: GGCTTTTCGCAAGGCAGCCAAGACCCGGCAGCGGGA...TCCTGTTTTGTAATCATGACTTATTTTCGACCTGAGACTTGATGTCTTTCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS GCA 72 bp | CGAAAGCCAGGCTGGCTTCGTTCTCGGTGTTCCCGCTaGCGGGTCTTGGCTGCCTTGCGAAAAGCCGCCGAC | + |
Preference number: 6 (lower is better) Translates to: RKPGWLRSRCSR*RVLAALRKAAD Trigger: GTCGGCGGCTTTTCGCAAGGCAGCCAAGACCCGGCAGCGGGAACACCGAGAACGAAGCCAGCCTGGCTTTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS GCA 72 bp | TTCTCCCGCTCGATGCGCTGCGTCAAACAGTCATACTaGTTCTGTCGTTCCTTGGCTATCCGCTTGAGTCCA | + |
Preference number: 6 (lower is better) Translates to: FSRSMRCVKQSY*FCRSLAIRLSP Trigger: TGGACTCAAGCGGATAGCCAAGGAACGACAGAAGCAGTATGACTGTTTGACGCAGCGCATCGAGCGGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS TCA 72 bp | TTCTGTCGTTCCTTGGCTATCCGCTTGAGTCCAGTCTaGGGGGTGGCTCCTTTCACTCTCTCCTTCTGTAAG | + |
Preference number: 6 (lower is better) Translates to: FCRSLAIRLSPV*GVAPFTLSFCK Trigger: CTTACAGAAGGAGAGAGTGAAAGGAGCCACCCCTCAGACTGGACTCAAGCGGATAGCCAAGGAACGACAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS CCA 72 bp | GTTTTATCCATGAGGTCTTTGCGTGTCTGGATTTTCTaGGCAACAACGAACAGCTGCTTCTCCCGCTCGATG | + |
Preference number: 6 (lower is better) Translates to: VLSMRSLRVWIF*ATTNSCFSRSM Trigger: CATCGAGCGGGAGAAGCAGCTGTTCGTTGTTGCCCAGAAAATCCAGACACGCAAAGACCTCATGGATAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS TCA 72 bp | CTGTTGCTTCCCCTGGAAATCCAGCAGATGGAGCTCTaGTTTCAATCTTTCAATTTTCTTCGCCTCTGCAAC | + |
Preference number: 6 (lower is better) Translates to: LLLPLEIQQMEL*FQSFNFLRLCN Trigger: GTTGCAGAGGCGAAGAAAATTGAAAGATTGAAATCAGAGCTCCATCTGCTGGATTTCCAGGGGAAGCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |
||
CDS CCA 72 bp | TCAACGTTTTCGGCGAGTCTGGAATCTGTAAATAGCTaGGGAGTTCACTGTTTCTTTCTTCACCTTCACCTT | + |
Preference number: 6 (lower is better) Translates to: STFSASLESVNS*GVHCFFLHLHL Trigger: AAGGTGAAGGTGAAGAAAGAAACAGTGAACTCCCCAGCTATTTACAGATTCCAGACTCGCCGAAAACGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030738.8 |