Pregenerated sensors for UTF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047751Ensembl transcript IDs: ENSMUST00000168457.3
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCAGCGTGCCCAGAAGTAGCTCCGTCTCTCGGGCACTCCAGGGCGTaGGCTGCGCCGAGTCCGGGGACACGGGAGCCTTGGGCGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: AACPEVAPSLGHSRA*AAPSPGTREPWASR Trigger: CCGGCTCGCCCAAGGCTCCCGTGTCCCCGGACTCGGCGCAGCGCACGCCCTGGAGTGCCCGAGAGACGGAGCTACTTCTGGGCACGCTGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 90 bp | GTGCCCAGAAGTAGCTCCGTCTCTCGGGCACTCCAGGGCGTGCGCTaGGCCGAGTCCGGGGACACGGGAGCCTTGGGCGAGCCGGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: VPRSSSVSRALQGVR*AESGDTGALGEPGS Trigger: TGAACCCGGCTCGCCCAAGGCTCCCGTGTCCCCGGACTCGGCGCAGCGCACGCCCTGGAGTGCCCGAGAGACGGAGCTACTTCTGGGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 90 bp | ACGGCGGCACTGAGCGGGCGTGCGCCGAACTTGCTGACGGGCCAGTaGGGCGGACACGCGGCGGTAAGTAGGCAGAGTCTGCCTGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: TAALSGRAPNLLTGQ*GGHAAVSRQSLPAV Trigger: GACCGCAGGCAGACTCTGCCTACTTACCGCCGCGTGTCCGCCGCACTGGCCCGTCAGCAAGTTCGGCGCACGCCCGCTCAGTGCCGCCGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS TCA 90 bp | AGCGGCGGCGAACCCTCGGCGGCCCATCGTCCCCCAATAGCCCCATaGGTTGGCGGATCTGGTTATCGAAGGGTCCGGACGGCTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: SGGEPSAAHRPPIAP*VGGSGYRRVRTAGP Trigger: AGGGCCAGCCGTCCGGACCCTTCGATAACCAGATCCGCCAACTCATGGGGCTATTGGGGGACGATGGGCCGCCGAGGGTTCGCCGCCGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 90 bp | TGCGGTCCAGCAGTAGTGAGCGCCACATGGCCGGCTGCAGCAGCGTaGCCAGAAGTAGCTCCGTCTCTCGGGCACTCCAGGGCGTGCGCT | + |
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Preference number: 5 (lower is better) Translates to: CGPAVVSATWPAAAA*PEVAPSLGHSRACA Trigger: AGCGCACGCCCTGGAGTGCCCGAGAGACGGAGCTACTTCTGGGCACGCTGCTGCAGCCGGCCATGTGGCGCTCACTACTGCTGGACCGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 90 bp | CGGCGAACCCTCGGCGGCCCATCGTCCCCCAATAGCCCCATGAGTTaGCGGATCTGGTTATCGAAGGGTCCGGACGGCTGGCCCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RRTLGGPSSPNSPMS*RIWLSKGPDGWPWE Trigger: CTCCCAGGGCCAGCCGTCCGGACCCTTCGATAACCAGATCCGCCAACTCATGGGGCTATTGGGGGACGATGGGCCGCCGAGGGTTCGCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS TCA 90 bp | CGAAGGGTCCGGACGGCTGGCCCTGGGAGTCTCGGAGTTTGTCCTTaGGGAACTTGTAGCGACGGCGGCACTGAGCGGGCGTGCGCCGAA | + |
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Preference number: 5 (lower is better) Translates to: RRVRTAGPGSLGVCP*GTCSDGGTERACAE Trigger: TTCGGCGCACGCCCGCTCAGTGCCGCCGTCGCTACAAGTTCCTCAAGGACAAACTCCGAGACTCCCAGGGCCAGCCGTCCGGACCCTTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 90 bp | AGAGTCTGCCTGCGGTCCAGCAGTAGTGAGCGCCACATGGCCGGCTaGAGCAGCGTGCCCAGAAGTAGCTCCGTCTCTCGGGCACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RVCLRSSSSERHMAG*SSVPRSSSVSRALQ Trigger: CTGGAGTGCCCGAGAGACGGAGCTACTTCTGGGCACGCTGCTGCAGCCGGCCATGTGGCGCTCACTACTGCTGGACCGCAGGCAGACTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 90 bp | CTCGGCGGCCCATCGTCCCCCAATAGCCCCATGAGTTGGCGGATCTaGTTATCGAAGGGTCCGGACGGCTGGCCCTGGGAGTCTCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LGGPSSPNSPMSWRI*LSKGPDGWPWESRS Trigger: ACTCCGAGACTCCCAGGGCCAGCCGTCCGGACCCTTCGATAACCAGATCCGCCAACTCATGGGGCTATTGGGGGACGATGGGCCGCCGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 90 bp | TCGCCCAAGTGCGTCAAGGTCTGCAGCAACGCGGTATTCAACGACTaGGGAGCAACCTGCGGGGAAGAAGCACGGCCCTGGGAAAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SPKCVKVCSNAVFND*GATCGEEARPWERP Trigger: TGGCCTTTCCCAGGGCCGTGCTTCTTCCCCGCAGGTTGCTCCCCAGTCGTTGAATACCGCGTTGCTGCAGACCTTGACGCACTTGGGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 90 bp | GTCAAGGTCTGCAGCAACGCGGTATTCAACGACTGGGGAGCAACCTaGGGGGAAGAAGCACGGCCCTGGGAAAGGCCAGGAGGCTCATTC | + |
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Preference number: 5 (lower is better) Translates to: VKVCSNAVFNDWGAT*GEEARPWERPGGSF Trigger: GAATGAGCCTCCTGGCCTTTCCCAGGGCCGTGCTTCTTCCCCGCAGGTTGCTCCCCAGTCGTTGAATACCGCGTTGCTGCAGACCTTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 90 bp | AACCCCACCGCCAGAGAAACGGTTTGGTCGAAGGAACCTCGTAGATaGTCCACGTGCTGGTTCAGGGTCGACAGCTGGTCGCGCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: NPTARETVWSKEPRR*STCWFRVDSWSRRG Trigger: CCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGCACGTGGAGCATCTACGAGGTTCCTTCGACCAAACCGTTTCTCTGGCGGTGGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS TCA 90 bp | CTGGTTCAGGGTCGACAGCTGGTCGCGCAGAGGGCCCAGAACTGTTaGGATGTCGCCCAAGTGCGTCAAGGTCTGCAGCAACGCGGTATT | + |
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Preference number: 5 (lower is better) Translates to: LVQGRQLVAQRAQNC*DVAQVRQGLQQRGI Trigger: AATACCGCGTTGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAGTTCTGGGCCCTCTGCGCGACCAGCTGTCGACCCTGAACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 90 bp | AGCTGGTCGCGCAGAGGGCCCAGAACTGTTGAGATGTCGCCCAAGTaGGTCAAGGTCTGCAGCAACGCGGTATTCAACGACTGGGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: SWSRRGPRTVEMSPK*VKVCSNAVFNDWGA Trigger: TGCTCCCCAGTCGTTGAATACCGCGTTGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAGTTCTGGGCCCTCTGCGCGACCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 90 bp | GCCAGAGAAACGGTTTGGTCGAAGGAACCTCGTAGATGCTCCACGTaGTGGTTCAGGGTCGACAGCTGGTCGCGCAGAGGGCCCAGAACT | + |
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Preference number: 5 (lower is better) Translates to: ARETVWSKEPRRCST*WFRVDSWSRRGPRT Trigger: AGTTCTGGGCCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGCACGTGGAGCATCTACGAGGTTCCTTCGACCAAACCGTTTCTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 90 bp | AAGGAACCTCGTAGATGCTCCACGTGCTGGTTCAGGGTCGACAGCTaGTCGCGCAGAGGGCCCAGAACTGTTGAGATGTCGCCCAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: KEPRRCSTCWFRVDS*SRRGPRTVEMSPKC Trigger: GCACTTGGGCGACATCTCAACAGTTCTGGGCCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGCACGTGGAGCATCTACGAGGTTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 90 bp | AGAGGGCCCAGAACTGTTGAGATGTCGCCCAAGTGCGTCAAGGTCTaGAGCAACGCGGTATTCAACGACTGGGGAGCAACCTGCGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: RGPRTVEMSPKCVKV*SNAVFNDWGATCGE Trigger: TTCCCCGCAGGTTGCTCCCCAGTCGTTGAATACCGCGTTGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAGTTCTGGGCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 90 bp | GAGGCTGCACTGCCCAGAATGAACCCCACCGCCAGAGAAACGGTTTaGTCGAAGGAACCTCGTAGATGCTCCACGTGCTGGTTCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: EAALPRMNPTARETV*SKEPRRCSTCWFRV Trigger: GACCCTGAACCAGCACGTGGAGCATCTACGAGGTTCCTTCGACCAAACCGTTTCTCTGGCGGTGGGGTTCATTCTGGGCAGTGCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 90 bp | AGAGAAACGGTTTGGTCGAAGGAACCTCGTAGATGCTCCACGTGCTaGTTCAGGGTCGACAGCTGGTCGCGCAGAGGGCCCAGAACTGTT | + |
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Preference number: 5 (lower is better) Translates to: RETVWSKEPRRCSTC*FRVDSWSRRGPRTV Trigger: AACAGTTCTGGGCCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGCACGTGGAGCATCTACGAGGTTCCTTCGACCAAACCGTTTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 72 bp | GGTGCTAACGCGGAGAGGGACGAGCGGCCGCGGCGCTaGGGACGTCCAGGGCCAGTAGAGCGGCGGCGAACC | + |
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Preference number: 6 (lower is better) Translates to: GANAERDERPRR*GRPGPVERRRT Trigger: GGTTCGCCGCCGCTCTACTGGCCCTGGACGTCCCCAGCGCCGCGGCCGCTCGTCCCTCTCCGCGTTAGCACC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CAA 72 bp | GTAGCGACGGCGGCACTGAGCGGGCGTGCGCCGAACTaGCTGACGGGCCAGTGCGGCGGACACGCGGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: VATAALSGRAPN*LTGQCGGHAAV Trigger: TACCGCCGCGTGTCCGCCGCACTGGCCCGTCAGCAAGTTCGGCGCACGCCCGCTCAGTGCCGCCGTCGCTAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 72 bp | AGTAGCTCCGTCTCTCGGGCACTCCAGGGCGTGCGCTaGGCCGAGTCCGGGGACACGGGAGCCTTGGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSVSRALQGVR*AESGDTGALGE Trigger: CTCGCCCAAGGCTCCCGTGTCCCCGGACTCGGCGCAGCGCACGCCCTGGAGTGCCCGAGAGACGGAGCTACT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CAA 90 bp | GAGGAACTTGTAGCGACGGCGGCACTGAGCGGGCGTGCGCCGAACTaGCTGACGGGCCAGTGCGGCGGACACGCGGCGGTAAGTAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: EELVATAALSGRAPN*LTGQCGGHAAVSRQ Trigger: CTGCCTACTTACCGCCGCGTGTCCGCCGCACTGGCCCGTCAGCAAGTTCGGCGCACGCCCGCTCAGTGCCGCCGTCGCTACAAGTTCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 72 bp | CTGAGCGGGCGTGCGCCGAACTTGCTGACGGGCCAGTaGGGCGGACACGCGGCGGTAAGTAGGCAGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LSGRAPNLLTGQ*GGHAAVSRQSL Trigger: CAGACTCTGCCTACTTACCGCCGCGTGTCCGCCGCACTGGCCCGTCAGCAAGTTCGGCGCACGCCCGCTCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS TCA 72 bp | CGGACGGCTGGCCCTGGGAGTCTCGGAGTTTGTCCTTaGGGAACTTGTAGCGACGGCGGCACTGAGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RTAGPGSLGVCP*GTCSDGGTERA Trigger: CGCCCGCTCAGTGCCGCCGTCGCTACAAGTTCCTCAAGGACAAACTCCGAGACTCCCAGGGCCAGCCGTCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 72 bp | GCAGTAGTGAGCGCCACATGGCCGGCTGCAGCAGCGTaGCCAGAAGTAGCTCCGTCTCTCGGGCACTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AVVSATWPAAAA*PEVAPSLGHSR Trigger: CCTGGAGTGCCCGAGAGACGGAGCTACTTCTGGGCACGCTGCTGCAGCCGGCCATGTGGCGCTCACTACTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 72 bp | CTGCGGTCCAGCAGTAGTGAGCGCCACATGGCCGGCTaGAGCAGCGTGCCCAGAAGTAGCTCCGTCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LRSSSSERHMAG*SSVPRSSSVSR Trigger: CCGAGAGACGGAGCTACTTCTGGGCACGCTGCTGCAGCCGGCCATGTGGCGCTCACTACTGCTGGACCGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 72 bp | GAGTCTGCCTGCGGTCCAGCAGTAGTGAGCGCCACATaGCCGGCTGCAGCAGCGTGCCCAGAAGTAGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ESACGPAVVSAT*PAAAACPEVAP Trigger: CGGAGCTACTTCTGGGCACGCTGCTGCAGCCGGCCATGTGGCGCTCACTACTGCTGGACCGCAGGCAGACTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 72 bp | CTCGGCGGCCCATCGTCCCCCAATAGCCCCATGAGTTaGCGGATCTGGTTATCGAAGGGTCCGGACGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LGGPSSPNSPMS*RIWLSKGPDGW Trigger: CCAGCCGTCCGGACCCTTCGATAACCAGATCCGCCAACTCATGGGGCTATTGGGGGACGATGGGCCGCCGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 72 bp | CCATCGTCCCCCAATAGCCCCATGAGTTGGCGGATCTaGTTATCGAAGGGTCCGGACGGCTGGCCCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSSPNSPMSWRI*LSKGPDGWPWE Trigger: CTCCCAGGGCCAGCCGTCCGGACCCTTCGATAACCAGATCCGCCAACTCATGGGGCTATTGGGGGACGATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS TCA 72 bp | CAAGGATGCCCCGCTCGGAGGCTGCACTGCCCAGAATaGACCCCACCGCCAGAGAAACGGTTTGGTCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: QGCPARRLHCPE*TPPPEKRFGRR Trigger: CCTTCGACCAAACCGTTTCTCTGGCGGTGGGGTTCATTCTGGGCAGTGCAGCCTCCGAGCGGGGCATCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 72 bp | TGCGTCAAGGTCTGCAGCAACGCGGTATTCAACGACTaGGGAGCAACCTGCGGGGAAGAAGCACGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: CVKVCSNAVFND*GATCGEEARPW Trigger: CCAGGGCCGTGCTTCTTCCCCGCAGGTTGCTCCCCAGTCGTTGAATACCGCGTTGCTGCAGACCTTGACGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 72 bp | GTTTGGTCGAAGGAACCTCGTAGATGCTCCACGTGCTaGTTCAGGGTCGACAGCTGGTCGCGCAGAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VWSKEPRRCSTC*FRVDSWSRRGP Trigger: GGGCCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGCACGTGGAGCATCTACGAGGTTCCTTCGACCAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CAA 72 bp | GGGTCGACAGCTGGTCGCGCAGAGGGCCCAGAACTGTaGAGATGTCGCCCAAGTGCGTCAAGGTCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSTAGRAEGPEL*RCRPSASRSAA Trigger: TGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAGTTCTGGGCCCTCTGCGCGACCAGCTGTCGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CAA 90 bp | GCTGGTTCAGGGTCGACAGCTGGTCGCGCAGAGGGCCCAGAACTGTaGAGATGTCGCCCAAGTGCGTCAAGGTCTGCAGCAACGCGGTAT | + |
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Preference number: 6 (lower is better) Translates to: AGSGSTAGRAEGPEL*RCRPSASRSAATRY Trigger: ATACCGCGTTGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAGTTCTGGGCCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS TCA 72 bp | GGTCGACAGCTGGTCGCGCAGAGGGCCCAGAACTGTTaGGATGTCGCCCAAGTGCGTCAAGGTCTGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GRQLVAQRAQNC*DVAQVRQGLQQ Trigger: TTGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAGTTCTGGGCCCTCTGCGCGACCAGCTGTCGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 72 bp | ACGGTTTGGTCGAAGGAACCTCGTAGATGCTCCACGTaGTGGTTCAGGGTCGACAGCTGGTCGCGCAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: TVWSKEPRRCST*WFRVDSWSRRG Trigger: CCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGCACGTGGAGCATCTACGAGGTTCCTTCGACCAAACCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 72 bp | CGTAGATGCTCCACGTGCTGGTTCAGGGTCGACAGCTaGTCGCGCAGAGGGCCCAGAACTGTTGAGATGTCG | + |
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Preference number: 6 (lower is better) Translates to: RRCSTCWFRVDS*SRRGPRTVEMS Trigger: CGACATCTCAACAGTTCTGGGCCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGCACGTGGAGCATCTACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 72 bp | CGCAGAGGGCCCAGAACTGTTGAGATGTCGCCCAAGTaGGTCAAGGTCTGCAGCAACGCGGTATTCAACGAC | + |
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Preference number: 6 (lower is better) Translates to: RRGPRTVEMSPK*VKVCSNAVFND Trigger: GTCGTTGAATACCGCGTTGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAGTTCTGGGCCCTCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 72 bp | GCCAGAGAAACGGTTTGGTCGAAGGAACCTCGTAGATaGTCCACGTGCTGGTTCAGGGTCGACAGCTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: ARETVWSKEPRR*STCWFRVDSWS Trigger: CGACCAGCTGTCGACCCTGAACCAGCACGTGGAGCATCTACGAGGTTCCTTCGACCAAACCGTTTCTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS CCA 72 bp | CTGCCCAGAATGAACCCCACCGCCAGAGAAACGGTTTaGTCGAAGGAACCTCGTAGATGCTCCACGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPRMNPTARETV*SKEPRRCSTCW Trigger: CCAGCACGTGGAGCATCTACGAGGTTCCTTCGACCAAACCGTTTCTCTGGCGGTGGGGTTCATTCTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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| CDS GCA 72 bp | AGAACTGTTGAGATGTCGCCCAAGTGCGTCAAGGTCTaGAGCAACGCGGTATTCAACGACTGGGGAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: RTVEMSPKCVKV*SNAVFNDWGAT Trigger: GGTTGCTCCCCAGTCGTTGAATACCGCGTTGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168457.3 |
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