Pregenerated sensors for UST (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047712Ensembl transcript IDs: ENSMUST00000061601.9
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGAGGGTCCTGCAACCAGTCAGCCAACCCCCTCACCCATGGTGTaGCAGTGGCCATGGGTGGCAATTCGAACACACAGCAAGTGCTAT | + |
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Preference number: 1 (lower is better) Translates to: QEGPATSQPTPSPMV*QWPWVAIRTHSKCY Trigger: ATAGCACTTGCTGTGTGTTCGAATTGCCACCCATGGCCACTGTCACACCATGGGTGAGGGGGTTGGCTGACTGGTTGCAGGACCCTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CCA 90 bp | GATACCAGGAGGGTCCTGCAACCAGTCAGCCAACCCCCTCACCCATaGTGTGACAGTGGCCATGGGTGGCAATTCGAACACACAGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: DTRRVLQPVSQPPHP*CDSGHGWQFEHTAS Trigger: ACTTGCTGTGTGTTCGAATTGCCACCCATGGCCACTGTCACACCATGGGTGAGGGGGTTGGCTGACTGGTTGCAGGACCCTCCTGGTATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR TCA 90 bp | CCCCTCTTTGAACAGCTCCCTTATCCACTTCCTGTCCCAGTTCCCTaGGGCAGAAAGGAGGCCCATGAGTGGCCAGTGCTAGACTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: PLFEQLPYPLPVPVP*GRKEAHEWPVLDFS Trigger: AGAGAAGTCTAGCACTGGCCACTCATGGGCCTCCTTTCTGCCTCAGGGAACTGGGACAGGAAGTGGATAAGGGAGCTGTTCAAAGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CCA 90 bp | CCAGTCAGCCAACCCCCTCACCCATGGTGTGACAGTGGCCATGGGTaGCAATTCGAACACACAGCAAGTGCTATGTGCACCTCTAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: PVSQPPHPWCDSGHG*QFEHTASAMCTSRK Trigger: CTTTCTAGAGGTGCACATAGCACTTGCTGTGTGTTCGAATTGCCACCCATGGCCACTGTCACACCATGGGTGAGGGGGTTGGCTGACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR TCA 90 bp | CGTGCAACAATGAGGTCCTTATGTTTGATCTGCCCTGCCAACACGTaGCATAACAAGCTGACGCCTTCCAGGGAATGCCTTCCAAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: RATMRSLCLICPANT*HNKLTPSRECLPSR Trigger: TCTGCTTGGAAGGCATTCCCTGGAAGGCGTCAGCTTGTTATGTCACGTGTTGGCAGGGCAGATCAAACATAAGGACCTCATTGTTGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR GCA 90 bp | CCTGCCACACATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTaGACGTGCAACAATGAGGTCCTTATGTTTGATCTGCCCTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: PATHIKVRSQSVSGT*TCNNEVLMFDLPCQ Trigger: TTGGCAGGGCAGATCAAACATAAGGACCTCATTGTTGCACGTGCAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATGTGTGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR GCA 90 bp | GTAAACCTGAGGCAGACACAAGTTGTCACCAAATGTCCTTCCCACTaGCATCACTGCAGTCTGGCCTCTCTAGTTGCATTCTATCAACCA | + |
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Preference number: 1 (lower is better) Translates to: VNLRQTQVVTKCPSH*HHCSLASLVAFYQP Trigger: TGGTTGATAGAATGCAACTAGAGAGGCCAGACTGCAGTGATGGCAGTGGGAAGGACATTTGGTGACAACTTGTGTCTGCCTCAGGTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR GCA 90 bp | ACACATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGCACGTaGAACAATGAGGTCCTTATGTTTGATCTGCCCTGCCAACACGTG | + |
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Preference number: 1 (lower is better) Translates to: THIKVRSQSVSGTCT*NNEVLMFDLPCQHV Trigger: CACGTGTTGGCAGGGCAGATCAAACATAAGGACCTCATTGTTGCACGTGCAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR GCA 90 bp | CTAGGGCAGGACTTGGAACCCTTAGTTACCAAACACAACAGCTCCTaGAGGTCTAGAAGGAATGAAAAATGCCAAGTTCAGTATAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: LGQDLEPLVTKHNSS*RSRRNEKCQVQYSP Trigger: GGGGCTATACTGAACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGAGCTGTTGTGTTTGGTAACTAAGGGTTCCAAGTCCTGCCCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR GCA 90 bp | AGGCAGACACAAGTTGTCACCAAATGTCCTTCCCACTGCCATCACTaGAGTCTGGCCTCTCTAGTTGCATTCTATCAACCAGTGAGAATA | + |
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Preference number: 1 (lower is better) Translates to: RQTQVVTKCPSHCHH*SLASLVAFYQPVRI Trigger: TATTCTCACTGGTTGATAGAATGCAACTAGAGAGGCCAGACTGCAGTGATGGCAGTGGGAAGGACATTTGGTGACAACTTGTGTCTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR TCA 90 bp | CTTGTCTTCCTTCTACTCCTAGATGCTTCTAGACCCCTTCCTCTCTaGAATGGTTATTTCTGCGAGATACACATCAGGATGTCTTTACCA | + |
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Preference number: 1 (lower is better) Translates to: LVFLLLLDASRPLPL*NGYFCEIHIRMSLP Trigger: TGGTAAAGACATCCTGATGTGTATCTCGCAGAAATAACCATTTCAGAGAGGAAGGGGTCTAGAAGCATCTAGGAGTAGAAGGAAGACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTGCTAGGCCAAGATACCAGGAGGGTCCTGCAACCAGTCAGCCAACCCCCGACAGTGGCCATGGGTaGCAATTCGAACACACAGCA | + |
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Preference number: 2 (lower is better) Translates to: QCARPRYQEGPATSQPTPDSGHG*QFEHTA Trigger: TGCTGTGTGTTCGAATTGCCACCCATGGCCACTGTC...GGGGGTTGGCTGACTGGTTGCAGGACCCTCCTGGTATCTTGGCCTAGCACACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGATTCCTGCCACACATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGACCGACGGGGTGAGGTaGGGTGGGGGTAGAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: KDSCHTYQGQKSVSFWHLTDGVR*GGGRNP Trigger: GGGGTTTCTACCCCCACCCCACCTCACCCCGTCGGT...CAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATGTGTGGCAGGAATCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTGTGCTAGGCCAAGATACCAGGAGGGTCCTGCAACCAGTCAGCCAACCCCCTATTTTCTGAAGAGGTaGCTTGTGGTAGAGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: QCARPRYQEGPATSQPTPYFLKR*LVVEPS Trigger: AGATGGCTCTACCACAAGGCACCTCTTCAGAAAATA...GGGGGTTGGCTGACTGGTTGCAGGACCCTCCTGGTATCTTGGCCTAGCACACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CCA 90 bp | AAGATACCAGGAGGGTCCTGCAACCAGTCAGCCAACCCCCTCACCCATGGTGTGGTCCTCATACTTGTTTaGAGAATGGTAGCAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: KIPGGSCNQSANPLTHGVVLILV*RMVAGV Trigger: AACACCTGCTACCATTCTCCAAACAAGTATGAGGAC...CACACCATGGGTGAGGGGGTTGGCTGACTGGTTGCAGGACCCTCCTGGTATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAAGCGAGCTGATGAAGTACCTTGACTTTTTAGGGTGTAGGGGCAGTGTGAGACCCCTTCCTCTCTaGAATGGTTATTTCTGCGAG | + |
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Preference number: 2 (lower is better) Translates to: GPSELMKYLDFLGCRGSVRPLPL*NGYFCE Trigger: CTCGCAGAAATAACCATTTCAGAGAGGAAGGGGTCT...CACACTGCCCCTACACCCTAAAAAGTCAAGGTACTTCATCAGCTCGCTTGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTTGCAGATGACGGGCTTTAGACCTTGGCCAGTGTCCAGTTTTAGTGAAGGACGTGACATAACAAGCTaGCGCCTTCCAGGGAATGCC | + |
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Preference number: 2 (lower is better) Translates to: VLQMTGFRPWPVSSFSEGRDITS*RLPGNA Trigger: GGCATTCCCTGGAAGGCGTCAGCTTGTTATGTCACG...TCCTTCACTAAAACTGGACACTGGCCAAGGTCTAAAGCCCGTCATCTGCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR TCA 90 bp | TCGGCAAGCTTCCCTAGCTCTGATTTGTTGAGAAGGTGGATGCTGGACACTGACTCTCTCTTCTTTCACTaGAAGTGTCAGGTAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SASFPSSDLLRRWMLDTDSLFFH*KCQVGD Trigger: GTCCCCTACCTGACACTTTCAGTGAAAGAAGAGAGA...GTCAGTGTCCAGCATCCACCTTCTCAACAAATCAGAGCTAGGGAAGCTTGCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR GCA 90 bp | AGCATCATGGGTAGTGGAGAGTTGTCAGGAGTAAGTAGGTGCAAGGACTATTTTAGCCAAGCAGGGTCCTaGCCAGACACTGTGGCATTG | + |
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Preference number: 2 (lower is better) Translates to: SIMGSGELSGVSRCKDYFSQAGS*PDTVAL Trigger: CAATGCCACAGTGTCTGGGCAGGACCCTGCTTGGCT...AAAATAGTCCTTGCACCTACTTACTCCTGACAACTCTCCACTACCCATGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAAGCGAGCTGATGAAGTACCTTGACTTTTTAGGGTGTAGGGGCAGTGTGAAGCAGAGCGATACCTaGGAATGGAAGTTCTCAATG | + |
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Preference number: 2 (lower is better) Translates to: GPSELMKYLDFLGCRGSVKQSDT*EWKFSM Trigger: CATTGAGAACTTCCATTCCCAGGTATCGCTCTGCTT...CACACTGCCCCTACACCCTAAAAAGTCAAGGTACTTCATCAGCTCGCTTGGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CAA 90 bp | TACTGTGCACACAGCTTGATCTCGGCAAGCTTCCCTAGCTCTGATTaGTTGAGAAGGTGGATGCTGGACACTGACTTGTTCTCTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: YCAHSLISASFPSSD*LRRWMLDTDLFSQR Trigger: TCTCTGAGAGAACAAGTCAGTGTCCAGCATCCACCTTCTCAACAAATCAGAGCTAGGGAAGCTTGCCGAGATCAAGCTGTGTGCACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCCAAGCGAGCTGATGAAGTACCTTGACTTTTTAGGGTGTAGGGGCAGTGTGCAAGGACTATTTTGGTaGAAAGGAATTGCCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GPSELMKYLDFLGCRGSVQGLFW*KGIAQC Trigger: ACACTGGGCAATTCCTTTGCACCAAAATAGTCCTTG...CACACTGCCCCTACACCCTAAAAAGTCAAGGTACTTCATCAGCTCGCTTGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAGGGTTATGGGTGCAAACAGGTTCTATAAGAAAATGGTTCTACTGTTGCCCGGGCATCTCCCAATaGCCCCAACATGTAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: WEGLWVQTGSIRKWFYCCPGISQ*PQHVGM Trigger: CATTCCTACATGTTGGGGTCATTGGGAGATGCCCGG...GCAACAGTAGAACCATTTTCTTATAGAACCTGTTTGCACCCATAACCCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR TCA 90 bp | AGCATCATGGGTAGTGGAGAGTTGTCAGGAGTAAGTAGGTGCAAGGACTATTTTCAGACACTGTGGCATTaGGGTCTCTGGCATTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SIMGSGELSGVSRCKDYFQTLWH*GLWHWC Trigger: ACACCAATGCCAGAGACCTCAATGCCACAGTGTCTG...AAAATAGTCCTTGCACCTACTTACTCCTGACAACTCTCCACTACCCATGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CCA 90 bp | CATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGCACGTGCAACAATGAGAAACCCCAGAACCAGTaGATTCCTCCCTCTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: HIKVRSQSVSGTCTCNNEKPQNQ*IPPSCL Trigger: AAGACAAGAGGGAGGAATCCACTGGTTCTGGGGTTT...CTCATTGTTGCACGTGCAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CCA 90 bp | GTTTTGCAGATGACGGGCTTTAGACCTTGGCCAGTGTCCAGTTTTAGTGAAGGAAAGTCAGTCAGTTTCTaGCACTTGCACGTGCAACAA | + |
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Preference number: 2 (lower is better) Translates to: VLQMTGFRPWPVSSFSEGKSVSF*HLHVQQ Trigger: TTGTTGCACGTGCAAGTGCCAGAAACTGACTGACTT...TCCTTCACTAAAACTGGACACTGGCCAAGGTCTAAAGCCCGTCATCTGCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAGGGTTATGGGTGCAAACAGGTTCTATAAGAAAATGGTTCTACTGTTGCGTACTGTGTTCTTGGTaGCAGTGTCCCCATTCTACC | + |
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Preference number: 2 (lower is better) Translates to: WEGLWVQTGSIRKWFYCCVLCSW*QCPHST Trigger: GGTAGAATGGGGACACTGTCACCAAGAACACAGTAC...GCAACAGTAGAACCATTTTCTTATAGAACCTGTTTGCACCCATAACCCTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CAA 90 bp | AACAGGTTCTATAAGAAAATGGTTCTACTGTTGCTAGGGCAGGACTaGGAACCCTTAGTTACCAAACACAACAGCTCCTGCAGGTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: NRFYKKMVLLLLGQD*EPLVTKHNSSCRSR Trigger: TCTAGACCTGCAGGAGCTGTTGTGTTTGGTAACTAAGGGTTCCAAGTCCTGCCCTAGCAACAGTAGAACCATTTTCTTATAGAACCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CCA 90 bp | AGCATCATGGGTAGTGGAGAGTTGTCAGGAGTAAGTAGGTGCAAGGACTATTTTGATTTGTTGAGAAGGTaGATGCTGGACACTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: SIMGSGELSGVSRCKDYFDLLRR*MLDTDL Trigger: CAAGTCAGTGTCCAGCATCCACCTTCTCAACAAATC...AAAATAGTCCTTGCACCTACTTACTCCTGACAACTCTCCACTACCCATGATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CAA 90 bp | TGGAGACGACTTACAAAGCCCTGCAACTGCAGTCCTCATACTTGTTaGGAGAATGGTAGCAGGTGTTTTCTATGTTGCTCTTCAAAATCT | + |
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Preference number: 2 (lower is better) Translates to: WRRLTKPCNCSPHTC*ENGSRCFLCCSSKS Trigger: AGATTTTGAAGAGCAACATAGAAAACACCTGCTACCATTCTCCAAACAAGTATGAGGACTGCAGTTGCAGGGCTTTGTAAGTCGTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAGGGTTATGGGTGCAAACAGGTTCTATAAGAAAATGGTTCTACTGTTGCAGAAGGAATGAAAAATaGCAAGTTCAGTATAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: WEGLWVQTGSIRKWFYCCRRNEK*QVQYSP Trigger: GGGGCTATACTGAACTTGGCATTTTTCATTCCTTCT...GCAACAGTAGAACCATTTTCTTATAGAACCTGTTTGCACCCATAACCCTTCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR TCA 72 bp | CCTGCAACCAGTCAGCCAACCCCCTCACCCATGGTGTaGCAGTGGCCATGGGTGGCAATTCGAACACACAGC | + |
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Preference number: 3 (lower is better) Translates to: PATSQPTPSPMV*QWPWVAIRTHS Trigger: GCTGTGTGTTCGAATTGCCACCCATGGCCACTGTCACACCATGGGTGAGGGGGTTGGCTGACTGGTTGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CCA 72 bp | AGGGTCCTGCAACCAGTCAGCCAACCCCCTCACCCATaGTGTGACAGTGGCCATGGGTGGCAATTCGAACAC | + |
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Preference number: 3 (lower is better) Translates to: RVLQPVSQPPHP*CDSGHGWQFEH Trigger: GTGTTCGAATTGCCACCCATGGCCACTGTCACACCATGGGTGAGGGGGTTGGCTGACTGGTTGCAGGACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CCA 72 bp | CAACCCCCTCACCCATGGTGTGACAGTGGCCATGGGTaGCAATTCGAACACACAGCAAGTGCTATGTGCACC | + |
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Preference number: 3 (lower is better) Translates to: QPPHPWCDSGHG*QFEHTASAMCT Trigger: GGTGCACATAGCACTTGCTGTGTGTTCGAATTGCCACCCATGGCCACTGTCACACCATGGGTGAGGGGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CAA 90 bp | AAGATACCAGGAGGGTCCTGCAACCAGTCAGCCAACCCCCTCACCCATGGTGTGCCTAGCTCTGATTTGTaGAGAAGGTGGATGCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: KIPGGSCNQSANPLTHGVPSSDL*RRWMLD Trigger: GTCCAGCATCCACCTTCTCAACAAATCAGAGCTAGG...CACACCATGGGTGAGGGGGTTGGCTGACTGGTTGCAGGACCCTCCTGGTATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CAA 90 bp | CAGTGTGCTAGGCCAAGATACCAGGAGGGTCCTGCAACCAGTCAGCCAACCCCCTTGCTAGGGCAGGACTaGGAACCCTTAGTTACCAAA | + |
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Preference number: 3 (lower is better) Translates to: QCARPRYQEGPATSQPTPLLGQD*EPLVTK Trigger: TTTGGTAACTAAGGGTTCCAAGTCCTGCCCTAGCAA...GGGGGTTGGCTGACTGGTTGCAGGACCCTCCTGGTATCTTGGCCTAGCACACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR GCA 72 bp | GACACCAATCTACTCTACCCTAGCCAAGCAGGGTCCTaGCCAGACACTGTGGCATTGAGGTCTCTGGCATTG | + |
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Preference number: 3 (lower is better) Translates to: DTNLLYPSQAGS*PDTVALRSLAL Trigger: CAATGCCAGAGACCTCAATGCCACAGTGTCTGGGCAGGACCCTGCTTGGCTAGGGTAGAGTAGATTGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CAA 90 bp | GGCCCAAGCGAGCTGATGAAGTACCTTGACTTTTTAGGGTGTAGGGGCAGTGTGCCAGACACTGTGGCATaGAGGTCTCTGGCATTGGTG | + |
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Preference number: 3 (lower is better) Translates to: GPSELMKYLDFLGCRGSVPDTVA*RSLALV Trigger: CACCAATGCCAGAGACCTCAATGCCACAGTGTCTGG...CACACTGCCCCTACACCCTAAAAAGTCAAGGTACTTCATCAGCTCGCTTGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR GCA 72 bp | GTGGCCAGTGCTAGACTTCTCTACCTCTGTGGTCCCTaGCTTTCCTTTGAGCGGGGACCTGTCTTAATGCAT | + |
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Preference number: 3 (lower is better) Translates to: VASARLLYLCGP*LSFERGPVLMH Trigger: ATGCATTAAGACAGGTCCCCGCTCAAAGGAAAGGCAGGGACCACAGAGGTAGAGAAGTCTAGCACTGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CCA 72 bp | GCCTTCCAGGGAATGCCTTCCAAGCAGAGCGATACCTaGGAATGGAAGTTCTCAATGGAGCTTACTGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: AFQGMPSKQSDT*EWKFSMELTVH Trigger: GTGCACAGTAAGCTCCATTGAGAACTTCCATTCCCAGGTATCGCTCTGCTTGGAAGGCATTCCCTGGAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR TCA 72 bp | ATGAGGTCCTTATGTTTGATCTGCCCTGCCAACACGTaGCATAACAAGCTGACGCCTTCCAGGGAATGCCTT | + |
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Preference number: 3 (lower is better) Translates to: MRSLCLICPANT*HNKLTPSRECL Trigger: AAGGCATTCCCTGGAAGGCGTCAGCTTGTTATGTCACGTGTTGGCAGGGCAGATCAAACATAAGGACCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CCA 72 bp | CTAACTCACTTGGCTGTCTTCTTCAATGGCAGGCTCTaGGGTAAACCTGAGGCAGACACAAGTTGTCACCAA | + |
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Preference number: 3 (lower is better) Translates to: LTHLAVFFNGRL*GKPEADTSCHQ Trigger: TTGGTGACAACTTGTGTCTGCCTCAGGTTTACCCCAGAGCCTGCCATTGAAGAAGACAGCCAAGTGAGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CCA 72 bp | CAGCTAACCATCGCCATCACTGTGTATGGAATACCATaGAGACGACTTACAAAGCCCTGCAACTGCAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: QLTIAITVYGIP*RRLTKPCNCSP Trigger: AGGACTGCAGTTGCAGGGCTTTGTAAGTCGTCTCCATGGTATTCCATACACAGTGATGGCGATGGTTAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR TCA 72 bp | ATGAGTGTGCTTTCAGGATCGCACACGGTGTGCAATTaGGCTAAGGATTCCTGCCACACATATCAAGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: MSVLSGSHTVCN*AKDSCHTYQGQ Trigger: CTGACCTTGATATGTGTGGCAGGAATCCTTAGCTCAATTGCACACCGTGTGCGATCCTGAAAGCACACTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR GCA 72 bp | AAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGCACGTaGAACAATGAGGTCCTTATGTTTGATCTGCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: KVRSQSVSGTCT*NNEVLMFDLPC Trigger: GCAGGGCAGATCAAACATAAGGACCTCATTGTTGCACGTGCAAGTGCCAGAAACTGACTGACTTCTGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR CCA 72 bp | TGCAAAGGAATTGCCCAGTGTTTACTCAGATCATGTTaGGACACCAATCTACTCTACCCTAGCCAAGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: CKGIAQCLLRSC*DTNLLYPSQAG Trigger: CCCTGCTTGGCTAGGGTAGAGTAGATTGGTGTCCCAACATGATCTGAGTAAACACTGGGCAATTCCTTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| 3UTR-3UTR CAA 90 bp | AATTCGAACACACAGCAAGTGCTATGTGCACCTCTAGAAAGCAGGGGACCTTTAAGTCCTCATACTTGTTaGGAGAATGGTAGCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: NSNTQQVLCAPLESRGPLSPHTC*ENGSRC Trigger: ACACCTGCTACCATTCTCCAAACAAGTATGAGGACT...TAAAGGTCCCCTGCTTTCTAGAGGTGCACATAGCACTTGCTGTGTGTTCGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCATCATGGGTAGTGGAGAGTTGTCAGGAGTAAGTAGGTGCAAGGACTATTTTATAAGTACTGTGTTCTaGGTGACAGTGTCCCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: SIMGSGELSGVSRCKDYFISTVF*VTVSPF Trigger: GAATGGGGACACTGTCACCAAGAACACAGTACTTAT...AAAATAGTCCTTGCACCTACTTACTCCTGACAACTCTCCACTACCCATGATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR TCA 72 bp | CTTCTACTCCTAGATGCTTCTAGACCCCTTCCTCTCTaGAATGGTTATTTCTGCGAGATACACATCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LLLLDASRPLPL*NGYFCEIHIRM Trigger: CATCCTGATGTGTATCTCGCAGAAATAACCATTTCAGAGAGGAAGGGGTCTAGAAGCATCTAGGAGTAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR GCA 72 bp | GACTTGGAACCCTTAGTTACCAAACACAACAGCTCCTaGAGGTCTAGAAGGAATGAAAAATGCCAAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLEPLVTKHNSS*RSRRNEKCQVQ Trigger: CTGAACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGAGCTGTTGTGTTTGGTAACTAAGGGTTCCAAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR GCA 72 bp | GATGGTTTCTGTAAAGTACAAAATGTGTGCCTGGTGTaGCAAGCCAGAGTCTTGTTTATCTTAAGTACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DGFCKVQNVCLV*QARVLFILSTS Trigger: AGAAGTACTTAAGATAAACAAGACTCTGGCTTGGCACACCAGGCACACATTTTGTACTTTACAGAAACCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGCTAGGCCAAGATACCAGGAGGGTCCTGCAACCAGTCAGCCAACCCCCGCGGGATCCGGCGCTTaGAGCTGCCCAGGCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCARPRYQEGPATSQPTPAGSGA*SCPGTE Trigger: CTCCGTGCCTGGGCAGCTGCAAGCGCCGGATCCCGC...GGGGGTTGGCTGACTGGTTGCAGGACCCTCCTGGTATCTTGGCCTAGCACACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGCTAGGCCAAGATACCAGGAGGGTCCTGCAACCAGTCAGCCAACCCCCCTCCTCGTCGTCGATTaGCTCCTCCGTCTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QCARPRYQEGPATSQPTPLLVVD*LLRLQG Trigger: CCCCTGGAGACGGAGGAGCCAATCGACGACGAGGAG...GGGGGTTGGCTGACTGGTTGCAGGACCCTCCTGGTATCTTGGCCTAGCACACTG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | CCAGACACTGTGGCATTGAGGTCTCTGGCATTGGTGTCCCTGGGAAGGGTTATGCCAGGGGCGTGGGGATaGAGAACTGTGGTCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PDTVALRSLALVSLGRVMPGAWG*RTVVSR Trigger: CCGTGAGACCACAGTTCTTCATCCCCACGCCCCTGG...CATAACCCTTCCCAGGGACACCAATGCCAGAGACCTCAATGCCACAGTGTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGCAGGTCTAGAAGGAATGAAAAATGCCAAGTTCAGTATAGCCCCATTGGCGGGGCCAGGGATCCGTaGCGCCGCCGGGATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCRSRRNEKCQVQYSPIGGARDP*RRRDAA Trigger: AGCAGCATCCCGGCGGCGGCACGGATCCCTGGCCCC...GCCAATGGGGCTATACTGAACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTTCCAGGGAATGCCTTCCAAGCAGAGCGATACCTGGGAATGGAAGTTCTCGGGGATGAAGAACTGTaGTCTCACGGGAGGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLPGNAFQAERYLGMEVLGDEEL*SHGRSA Trigger: AGCGGACCTCCCGTGAGACCACAGTTCTTCATCCCC...GAGAACTTCCATTCCCAGGTATCGCTCTGCTTGGAAGGCATTCCCTGGAAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | AATTCGAACACACAGCAAGTGCTATGTGCACCTCTAGAAAGCAGGGGACCTTTAGAGGGGGTCCCCCGCTaGGCTGGTAGAAGAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSNTQQVLCAPLESRGPLEGVPR*AGRRGS Trigger: GCTCCCTCTTCTACCAGCTCAGCGGGGGACCCCCTC...TAAAGGTCCCCTGCTTTCTAGAGGTGCACATAGCACTTGCTGTGTGTTCGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | GTTACCAAACACAACAGCTCCTGCAGGTCTAGAAGGAATGAAAAATGCCAAGTTTCCGGCGCTTGCAGCTaGCCAGGCACGGAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VTKHNSSCRSRRNEKCQVSGACS*PGTEGR Trigger: GCGCCCCTCCGTGCCTGGGCAGCTGCAAGCGCCGGA...AACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGAGCTGTTGTGTTTGGTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | TCGGCAAGCTTCCCTAGCTCTGATTTGTTGAGAAGGTGGATGCTGGACACTGACGGGGTGCGGATCATGTaGTTCTGTTCCCCTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SASFPSSDLLRRWMLDTDGVRIM*FCSPLQ Trigger: TTGGAGAGGGGAACAGAATCACATGATCCGCACCCC...GTCAGTGTCCAGCATCCACCTTCTCAACAAATCAGAGCTAGGGAAGCTTGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | GGCCCAAGCGAGCTGATGAAGTACCTTGACTTTTTAGGGTGTAGGGGCAGTGTGGCCTCATGCTGGGGGTaGGGATCATGTGATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPSELMKYLDFLGCRGSVASCWG*GSCDSV Trigger: AACAGAATCACATGATCCGCACCCCCAGCATGAGGC...CACACTGCCCCTACACCCTAAAAAGTCAAGGTACTTCATCAGCTCGCTTGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | CCAGACACTGTGGCATTGAGGTCTCTGGCATTGGTGTCCCTGGGAAGGGTTATGTCCCTACATCTGGGGTaGTGTCCACAGAAATATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDTVALRSLALVSLGRVMSLHLG*CPQKYG Trigger: CCCATATTTCTGTGGACAGCACCCCAGATGTAGGGA...CATAACCCTTCCCAGGGACACCAATGCCAGAGACCTCAATGCCACAGTGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | CATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGCACGTGCAACAATGAGCGTTCACGTTCAGCTTaGCCCGCTCCAGCGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: HIKVRSQSVSGTCTCNNERSRSA*PAPAPT Trigger: AGTGGGCGCTGGAGCGGGCCAAGCTGAACGTGAACG...CTCATTGTTGCACGTGCAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | AGCATCATGGGTAGTGGAGAGTTGTCAGGAGTAAGTAGGTGCAAGGACTATTTTGTGCCGCCGCCGGGATaGTGCTGCTGCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIMGSGELSGVSRCKDYFVPPPG*CCCFFF Trigger: GAAGAAGAAGCAGCAGCAGCATCCCGGCGGCGGCAC...AAAATAGTCCTTGCACCTACTTACTCCTGACAACTCTCCACTACCCATGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | AAGGATTCCTGCCACACATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGGCTCCTCCTGCCTCATaGTGGGGGTGCGGATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KDSCHTYQGQKSVSFWHLAPPAS*WGCGSC Trigger: ACATGATCCGCACCCCCAGCATGAGGCAGGAGGAGC...CAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATGTGTGGCAGGAATCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTTCCAGGGAATGCCTTCCAAGCAGAGCGATACCTGGGAATGGAAGTTCTCGACCTTACTAGGAGGTaGTCCATGGTCATCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLPGNAFQAERYLGMEVLDLTRR*SMVIQV Trigger: TACTTGGATGACCATGGACCACCTCCTAGTAAGGTC...GAGAACTTCCATTCCCAGGTATCGCTCTGCTTGGAAGGCATTCCCTGGAAGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCAAGCGAGCTGATGAAGTACCTTGACTTTTTAGGGTGTAGGGGCAGTGTGAAGTTTCCTGTGCTCTaGGTCCTTGTAGATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPSELMKYLDFLGCRGSVKFPVL*VLVDAQ Trigger: CTGAGCATCTACAAGGACCCAGAGCACAGGAAACTT...CACACTGCCCCTACACCCTAAAAAGTCAAGGTACTTCATCAGCTCGCTTGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR CAA 72 bp | CACAGCTTGATCTCGGCAAGCTTCCCTAGCTCTGATTaGTTGAGAAGGTGGATGCTGGACACTGACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSLISASFPSSD*LRRWMLDTDLF Trigger: GAACAAGTCAGTGTCCAGCATCCACCTTCTCAACAAATCAGAGCTAGGGAAGCTTGCCGAGATCAAGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAGCGAGCTGATGAAGTACCTTGACTTTTTAGGGTGTAGGGGCAGTGTGTGCTCAGCACACCCTTaGAGTAATGAGGTAAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GPSELMKYLDFLGCRGSVCSAHP*SNEVKI Trigger: GATTTTTACCTCATTACTTCAAGGGTGTGCTGAGCA...CACACTGCCCCTACACCCTAAAAAGTCAAGGTACTTCATCAGCTCGCTTGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCAAGCGAGCTGATGAAGTACCTTGACTTTTTAGGGTGTAGGGGCAGTGTGGGTCATCCAAGTAAGTaGAATTTCCCAAATACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPSELMKYLDFLGCRGSVGHPSK*NFPNTA Trigger: GGCAGTATTTGGGAAATTCCACTTACTTGGATGACC...CACACTGCCCCTACACCCTAAAAAGTCAAGGTACTTCATCAGCTCGCTTGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | AGCATCATGGGTAGTGGAGAGTTGTCAGGAGTAAGTAGGTGCAAGGACTATTTTTGTACACCACCTGGCTaGGGAAGGGAAGGACCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SIMGSGELSGVSRCKDYFCTPPG*GREGPY Trigger: GTAAGGTCCTTCCCTTCCCCAGCCAGGTGGTGTACA...AAAATAGTCCTTGCACCTACTTACTCCTGACAACTCTCCACTACCCATGATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | CCAGACACTGTGGCATTGAGGTCTCTGGCATTGGTGTCCCTGGGAAGGGTTATGGAGAAGTTGAGGAAGTaGACATGTCTCGTGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PDTVALRSLALVSLGRVMEKLRK*TCLVNK Trigger: TTTATTCACGAGACATGTCCACTTCCTCAACTTCTC...CATAACCCTTCCCAGGGACACCAATGCCAGAGACCTCAATGCCACAGTGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | ATGCTTCTAGACCCCTTCCTCTCTGAAATGGTTATTTCTGCGAGATACACATCACCTCCTGCCTCATGCTaGGGGTGCGGATCATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MLLDPFLSEMVISARYTSPPASC*GCGSCD Trigger: ATCACATGATCCGCACCCCCAGCATGAGGCAGGAGG...TGATGTGTATCTCGCAGAAATAACCATTTCAGAGAGGAAGGGGTCTAGAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | AGCATCATGGGTAGTGGAGAGTTGTCAGGAGTAAGTAGGTGCAAGGACTATTTTCGGGCTCCCTACATCTaGGGTGCTGTCCACAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIMGSGELSGVSRCKDYFRAPYI*GAVHRN Trigger: ATTTCTGTGGACAGCACCCCAGATGTAGGGAGCCCG...AAAATAGTCCTTGCACCTACTTACTCCTGACAACTCTCCACTACCCATGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR CAA 72 bp | AGCTTGATCTCGGCAAGCTTCCCTAGCTCTGATTTGTaGAGAAGGTGGATGCTGGACACTGACTTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLISASFPSSDL*RRWMLDTDLFS Trigger: AGAGAACAAGTCAGTGTCCAGCATCCACCTTCTCAACAAATCAGAGCTAGGGAAGCTTGCCGAGATCAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR CAA 72 bp | AACAGCCGAGAAAGTCCAGCTAACACAGCTTTATCTTaGATGGTGGGATCTCGGTCAGCTAACCATCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSRESPANTALS*MVGSRSANHRH Trigger: ATGGCGATGGTTAGCTGACCGAGATCCCACCATCAAAGATAAAGCTGTGTTAGCTGGACTTTCTCGGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | TCCTGCAGGTCTAGAAGGAATGAAAAATGCCAAGTTCAGTATAGCCCCATTGGCAGCCGGGTCTTGTTGTaGATGTCTGATGTGACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCRSRRNEKCQVQYSPIGSRVLL*MSDVTK Trigger: TTTGGTCACATCAGACATTCACAACAAGACCCGGCT...GCCAATGGGGCTATACTGAACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTTCTAGACCCCTTCCTCTCTGAAATGGTTATTTCTGCGAGATACACATCACCAGAATGCACTCATTaGTGTCCAGGTAGCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MLLDPFLSEMVISARYTSPECTH*CPGSAP Trigger: AGGAGCGCTACCTGGACATCAATGAGTGCATTCTGG...TGATGTGTATCTCGCAGAAATAACCATTTCAGAGAGGAAGGGGTCTAGAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGCAGGTCTAGAAGGAATGAAAAATGCCAAGTTCAGTATAGCCCCATTGGCTACGACTGCCACACTTaGCAACTCTGTTGTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SCRSRRNEKCQVQYSPIGYDCHT*QLCCTP Trigger: TGGTGTACAACAGAGTTGGCAAGTGTGGCAGTCGTA...GCCAATGGGGCTATACTGAACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | AGCATCATGGGTAGTGGAGAGTTGTCAGGAGTAAGTAGGTGCAAGGACTATTTTCGGTCACAGTCATGTTaGCAAGTTTCCTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIMGSGELSGVSRCKDYFRSQSC*QVSCAL Trigger: CAGAGCACAGGAAACTTGGCAACATGACTGTGACCG...AAAATAGTCCTTGCACCTACTTACTCCTGACAACTCTCCACTACCCATGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR CAA 72 bp | GAAGGAATGAAAAATGCCAAGTTCAGTATAGCCCCATaGGCTATGAGTGTGCTTTCAGGATCGCACACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGMKNAKFSIAP*AMSVLSGSHTV Trigger: CACCGTGTGCGATCCTGAAAGCACACTCATAGCCAATGGGGCTATACTGAACTTGGCATTTTTCATTCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGGGTTATGGGTGCAAACAGGTTCTATAAGAAAATGGTTCTACTGTTGCCAAACCTGGAGAAGTTaGGGAAGTGGACATGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: WEGLWVQTGSIRKWFYCCQTWRS*GSGHVS Trigger: CGAGACATGTCCACTTCCTCAACTTCTCCAGGTTTG...GCAACAGTAGAACCATTTTCTTATAGAACCTGTTTGCACCCATAACCCTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | CATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGCACGTGCAACAATGAGCACAGAAATATGGGATaGTGTAAAACAGCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIKVRSQSVSGTCTCNNEHRNMG*CKTAWG Trigger: ACCCCAGGCTGTTTTACATCATCCCATATTTCTGTG...CTCATTGTTGCACGTGCAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | GTTACCAAACACAACAGCTCCTGCAGGTCTAGAAGGAATGAAAAATGCCAAGTTGAATTTCCCAAATACTaGCGCAGGTCGAGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTKHNSSCRSRRNEKCQVEFPKY*RRSSRK Trigger: CTTCCTGCTCGACCTGCGGCAGTATTTGGGAAATTC...AACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGAGCTGTTGTGTTTGGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | GTTACCAAACACAACAGCTCCTGCAGGTCTAGAAGGAATGAAAAATGCCAAGTTGAAGCCGTGCTTCTCTaGCAAGATTCTCAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTKHNSSCRSRRNEKCQVEAVLL*QDSQKQ Trigger: TTGCTTCTGAGAATCTTGTCAGAGAAGCACGGCTTC...AACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGAGCTGTTGTGTTTGGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGCAGGTCTAGAAGGAATGAAAAATGCCAAGTTCAGTATAGCCCCATTGGCACCAAATTGAAGCCGTaGTTCTCTGACAAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCRSRRNEKCQVQYSPIGTKLKP*FSDKIL Trigger: GAGAATCTTGTCAGAGAAGCACGGCTTCAATTTGGT...GCCAATGGGGCTATACTGAACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR CAA 72 bp | TATAAGAAAATGGTTCTACTGTTGCTAGGGCAGGACTaGGAACCCTTAGTTACCAAACACAACAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YKKMVLLLLGQD*EPLVTKHNSSC Trigger: GCAGGAGCTGTTGTGTTTGGTAACTAAGGGTTCCAAGTCCTGCCCTAGCAACAGTAGAACCATTTTCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR CAA 72 bp | GTAAGTAGGTGCAAGGACTATTTTGGTGCAAAGGAATaGCCCAGTGTTTACTCAGATCATGTTGGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: VSRCKDYFGAKE*PSVYSDHVGTP Trigger: TGGTGTCCCAACATGATCTGAGTAAACACTGGGCAATTCCTTTGCACCAAAATAGTCCTTGCACCTACTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| 3UTR CAA 72 bp | CTTACAAAGCCCTGCAACTGCAGTCCTCATACTTGTTaGGAGAATGGTAGCAGGTGTTTTCTATGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTKPCNCSPHTC*ENGSRCFLCCS Trigger: AGAGCAACATAGAAAACACCTGCTACCATTCTCCAAACAAGTATGAGGACTGCAGTTGCAGGGCTTTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR TCA 90 bp | GTTACCAAACACAACAGCTCCTGCAGGTCTAGAAGGAATGAAAAATGCCAAGTTCTTGTTGTGAATGTCTaGTGTGACCAAATTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTKHNSSCRSRRNEKCQVLVVNV*CDQIEA Trigger: GGCTTCAATTTGGTCACATCAGACATTCACAACAAG...AACTTGGCATTTTTCATTCCTTCTAGACCTGCAGGAGCTGTTGTGTTTGGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGGGTTATGGGTGCAAACAGGTTCTATAAGAAAATGGTTCTACTGTTGCCTGTCCACAGAAATATaGGATGATGTAAAACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WEGLWVQTGSIRKWFYCCLSTEI*DDVKQP Trigger: AGGCTGTTTTACATCATCCCATATTTCTGTGGACAG...GCAACAGTAGAACCATTTTCTTATAGAACCTGTTTGCACCCATAACCCTTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS TCA 90 bp | GCTCCTCGTCGTCGATTGGCTCCTCCGTCTCCAGGGGCGTGGGGATaGAGAACTGTGGTCTCACGGGAGGTCCGCTCACGCGAGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: APRRRLAPPSPGAWG*RTVVSREVRSRETS Trigger: TGAAGTCTCGCGTGAGCGGACCTCCCGTGAGACCACAGTTCTTCATCCCCACGCCCCTGGAGACGGAGGAGCCAATCGACGACGAGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS-3UTR CAA 90 bp | CCAGACACTGTGGCATTGAGGTCTCTGGCATTGGTGTCCCTGGGAAGGGTTATGAGCGGGATCCGGCGCTaGCAGCTGCCCAGGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: PDTVALRSLALVSLGRVMSGIRR*QLPRHG Trigger: TCCGTGCCTGGGCAGCTGCAAGCGCCGGATCCCGCT...CATAACCCTTCCCAGGGACACCAATGCCAGAGACCTCAATGCCACAGTGTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
||
| CDS CCA 90 bp | GTCGATTGGCTCCTCCGTCTCCAGGGGCGTGGGGATGAAGAACTGTaGTCTCACGGGAGGTCCGCTCACGCGAGACTTCAGTCCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VDWLLRLQGRGDEEL*SHGRSAHARLQSKL Trigger: AAGCTTGGACTGAAGTCTCGCGTGAGCGGACCTCCCGTGAGACCACAGTTCTTCATCCCCACGCCCCTGGAGACGGAGGAGCCAATCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS GCA 90 bp | CGTGCTTCTCTGACAAGATTCTCAGAAGCAAGACCACGGTACGACTaGCACACTTGCCAACTCTGTTGTACACCACCTGGCTGGGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: RASLTRFSEARPRYD*HTCQLCCTPPGWGR Trigger: CCTTCCCCAGCCAGGTGGTGTACAACAGAGTTGGCAAGTGTGGCAGTCGTACCGTGGTCTTGCTTCTGAGAATCTTGTCAGAGAAGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS-3UTR CAA 90 bp | GGCCCAAGCGAGCTGATGAAGTACCTTGACTTTTTAGGGTGTAGGGGCAGTGTGCCAAACCTGGAGAAGTaGAGGAAGTGGACATGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GPSELMKYLDFLGCRGSVPNLEK*RKWTCL Trigger: GAGACATGTCCACTTCCTCAACTTCTCCAGGTTTGG...CACACTGCCCCTACACCCTAAAAAGTCAAGGTACTTCATCAGCTCGCTTGGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS-3UTR CAA 90 bp | CATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGCACGTGCAACAATGAGCACTTGCCAACTCTGTaGTACACCACCTGGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: HIKVRSQSVSGTCTCNNEHLPTL*YTTWLG Trigger: CCCCAGCCAGGTGGTGTACAACAGAGTTGGCAAGTG...CTCATTGTTGCACGTGCAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS-3UTR CAA 90 bp | AAGGATTCCTGCCACACATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGGTACGACTGCCACACTaGCCAACTCTGTTGTACACC | + |
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Preference number: 5 (lower is better) Translates to: KDSCHTYQGQKSVSFWHLVRLPH*PTLLYT Trigger: GGTGTACAACAGAGTTGGCAAGTGTGGCAGTCGTAC...CAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATGTGTGGCAGGAATCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS-3UTR CAA 90 bp | GTTTTGCAGATGACGGGCTTTAGACCTTGGCCAGTGTCCAGTTTTAGTGAAGGAACGGTCACAGTCATGTaGCCAAGTTTCCTGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VLQMTGFRPWPVSSFSEGTVTVM*PSFLCS Trigger: AGAGCACAGGAAACTTGGCAACATGACTGTGACCGT...TCCTTCACTAAAACTGGACACTGGCCAAGGTCTAAAGCCCGTCATCTGCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS-3UTR CAA 90 bp | AATTCGAACACACAGCAAGTGCTATGTGCACCTCTAGAAAGCAGGGGACCTTTAAGTCCAAGCTTGCGCTaGAGCAGGTGGAATTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: NSNTQQVLCAPLESRGPLSPSLR*SRWNCS Trigger: AGAACAATTCCACCTGCTCAAGCGCAAGCTTGGACT...TAAAGGTCCCCTGCTTTCTAGAGGTGCACATAGCACTTGCTGTGTGTTCGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS-3UTR CAA 90 bp | AAGGATTCCTGCCACACATATCAAGGTCAGAAGTCAGTCAGTTTCTGGCACTTGTCTGATGTGACCAAATaGAAGCCGTGCTTCTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: KDSCHTYQGQKSVSFWHLSDVTK*KPCFSD Trigger: GTCAGAGAAGCACGGCTTCAATTTGGTCACATCAGA...CAAGTGCCAGAAACTGACTGACTTCTGACCTTGATATGTGTGGCAGGAATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS TCA 90 bp | CAAGTTTCCTGTGCTCTGGGTCCTTGTAGATGCTCAGCACACCCTTaGAGTAATGAGGTAAAAATCTTTCCAGTAAGAGCAGCACATCTT | + |
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Preference number: 5 (lower is better) Translates to: QVSCALGPCRCSAHP*SNEVKIFPVRAAHL Trigger: AAGATGTGCTGCTCTTACTGGAAAGATTTTTACCTCATTACTTCAAGGGTGTGCTGAGCATCTACAAGGACCCAGAGCACAGGAAACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS TCA 72 bp | GCCGCAGGTCGAGCAGGAAGCGAGGGGGTCCCCCGCTaGGCTGGTAGAAGAGGGAGCCCAGGCAGAAGACCA | + |
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Preference number: 6 (lower is better) Translates to: AAGRAGSEGVPR*AGRRGSPGRRP Trigger: TGGTCTTCTGCCTGGGCTCCCTCTTCTACCAGCTCAGCGGGGGACCCCCTCGCTTCCTGCTCGACCTGCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS TCA 72 bp | CGTCGATTGGCTCCTCCGTCTCCAGGGGCGTGGGGATaGAGAACTGTGGTCTCACGGGAGGTCCGCTCACGC | + |
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Preference number: 6 (lower is better) Translates to: RRLAPPSPGAWG*RTVVSREVRSR Trigger: GCGTGAGCGGACCTCCCGTGAGACCACAGTTCTTCATCCCCACGCCCCTGGAGACGGAGGAGCCAATCGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CCA 72 bp | TCCCCACGAGCAGGAAGTTTTCGTTCACGTTCAGCTTaGCCCGCTCCAGCGCCCACTCGCCGGGCTCCCTAC | + |
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Preference number: 6 (lower is better) Translates to: SPRAGSFRSRSA*PAPAPTRRAPY Trigger: GTAGGGAGCCCGGCGAGTGGGCGCTGGAGCGGGCCAAGCTGAACGTGAACGAAAACTTCCTGCTCGTGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CAA 90 bp | TCCTCCAGGATCCCCACGAGCAGGAAGTTTTCGTTCACGTTCAGCTaGGCCCGCTCCAGCGCCCACTCGCCGGGCTCCCTACATCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SSRIPTSRKFSFTFS*ARSSAHSPGSLHLG Trigger: CCCCAGATGTAGGGAGCCCGGCGAGTGGGCGCTGGAGCGGGCCAAGCTGAACGTGAACGAAAACTTCCTGCTCGTGGGGATCCTGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CCA 72 bp | CTCCTCCGTCTCCAGGGGCGTGGGGATGAAGAACTGTaGTCTCACGGGAGGTCCGCTCACGCGAGACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLRLQGRGDEEL*SHGRSAHARLQ Trigger: CTGAAGTCTCGCGTGAGCGGACCTCCCGTGAGACCACAGTTCTTCATCCCCACGCCCCTGGAGACGGAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CAA 72 bp | ATCCCCACGAGCAGGAAGTTTTCGTTCACGTTCAGCTaGGCCCGCTCCAGCGCCCACTCGCCGGGCTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: IPTSRKFSFTFS*ARSSAHSPGSL Trigger: TAGGGAGCCCGGCGAGTGGGCGCTGGAGCGGGCCAAGCTGAACGTGAACGAAAACTTCCTGCTCGTGGGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CAA 90 bp | CTCAGAAGCAAGACCACGGTACGACTGCCACACTTGCCAACTCTGTaGTACACCACCTGGCTGGGGAAGGGAAGGACCTTACTAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LRSKTTVRLPHLPTL*YTTWLGKGRTLLGG Trigger: ACCTCCTAGTAAGGTCCTTCCCTTCCCCAGCCAGGTGGTGTACAACAGAGTTGGCAAGTGTGGCAGTCGTACCGTGGTCTTGCTTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS GCA 72 bp | TTCTCAGAAGCAAGACCACGGTACGACTGCCACACTTaGCAACTCTGTTGTACACCACCTGGCTGGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: FSEARPRYDCHT*QLCCTPPGWGR Trigger: CCTTCCCCAGCCAGGTGGTGTACAACAGAGTTGGCAAGTGTGGCAGTCGTACCGTGGTCTTGCTTCTGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CAA 72 bp | AAGACCACGGTACGACTGCCACACTTGCCAACTCTGTaGTACACCACCTGGCTGGGGAAGGGAAGGACCTTA | + |
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Preference number: 6 (lower is better) Translates to: KTTVRLPHLPTL*YTTWLGKGRTL Trigger: TAAGGTCCTTCCCTTCCCCAGCCAGGTGGTGTACAACAGAGTTGGCAAGTGTGGCAGTCGTACCGTGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CAA 72 bp | ATTCTCAGAAGCAAGACCACGGTACGACTGCCACACTaGCCAACTCTGTTGTACACCACCTGGCTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ILRSKTTVRLPH*PTLLYTTWLGK Trigger: CTTCCCCAGCCAGGTGGTGTACAACAGAGTTGGCAAGTGTGGCAGTCGTACCGTGGTCTTGCTTCTGAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS GCA 72 bp | CTGACAAGATTCTCAGAAGCAAGACCACGGTACGACTaGCACACTTGCCAACTCTGTTGTACACCACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LTRFSEARPRYD*HTCQLCCTPPG Trigger: GCCAGGTGGTGTACAACAGAGTTGGCAAGTGTGGCAGTCGTACCGTGGTCTTGCTTCTGAGAATCTTGTCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CCA 72 bp | CACCTGGCTGGGGAAGGGAAGGACCTTACTAGGAGGTaGTCCATGGTCATCCAAGTAAGTGGAATTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: HLAGEGKDLTRR*SMVIQVSGISQ Trigger: TTGGGAAATTCCACTTACTTGGATGACCATGGACCACCTCCTAGTAAGGTCCTTCCCTTCCCCAGCCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CAA 90 bp | GCTCACGCGAGACTTCAGTCCAAGCTTGCGCTTGAGCAGGTGGAATaGTTCTCTGACGTAGTGGTAGAACTCGTACTCGTATCTCATTCG | + |
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Preference number: 6 (lower is better) Translates to: AHARLQSKLALEQVE*FSDVVVELVLVSHS Trigger: CGAATGAGATACGAGTACGAGTTCTACCACTACGTCAGAGAACAATTCCACCTGCTCAAGCGCAAGCTTGGACTGAAGTCTCGCGTGAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS CAA 72 bp | AGACTTCAGTCCAAGCTTGCGCTTGAGCAGGTGGAATaGTTCTCTGACGTAGTGGTAGAACTCGTACTCGTA | + |
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Preference number: 6 (lower is better) Translates to: RLQSKLALEQVE*FSDVVVELVLV Trigger: TACGAGTACGAGTTCTACCACTACGTCAGAGAACAATTCCACCTGCTCAAGCGCAAGCTTGGACTGAAGTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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| CDS TCA 72 bp | TCCATTTGTTCATTTTTAGTAAGCCGGGTCTTGTTGTaGATGTCTGATGTGACCAAATTGAAGCCGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SICSFLVSRVLL*MSDVTKLKPCF Trigger: GAAGCACGGCTTCAATTTGGTCACATCAGACATTCACAACAAGACCCGGCTTACTAAAAATGAACAAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061601.9 |
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