Pregenerated sensors for USP9Y (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069044

Ensembl transcript IDs: ENSMUST00000091188.7

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGAAATGAAGGATCCTCTTCTTCATGCTGTGGTGGAGCATCACCTTaGCCTTGTTCATATGGAGGAGTTGTTGGAGAAGTCTCATTGGAA	+
Preference number: 5 (lower is better) Translates to: GNEGSSSSCCGGASP*PCSYGGVVGEVSLE Trigger: TTCCAATGAGACTTCTCCAACAACTCCTCCATATGAACAAGGCCAAGGTGATGCTCCACCACAGCATGAAGAAGAGGATCCTTCATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091188.7
CDS CCA 90 bp	GTTCTATCTTGTGGTGCATGTGACACATGTTCATCGAGGGCATCTTaGTCATCAGGGTCCTCTTCTGGATACAGATCACAAGCTTTTGTA	+
Preference number: 5 (lower is better) Translates to: VLSCGACDTCSSRAS*SSGSSSGYRSQAFV Trigger: TACAAAAGCTTGTGATCTGTATCCAGAAGAGGACCCTGATGACCAAGATGCCCTCGATGAACATGTGTCACATGCACCACAAGATAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091188.7
CDS CCA 72 bp	GGATCCTCTTCTTCATGCTGTGGTGGAGCATCACCTTaGCCTTGTTCATATGGAGGAGTTGTTGGAGAAGTC	+
Preference number: 6 (lower is better) Translates to: GSSSSCCGGASP*PCSYGGVVGEV Trigger: GACTTCTCCAACAACTCCTCCATATGAACAAGGCCAAGGTGATGCTCCACCACAGCATGAAGAAGAGGATCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091188.7
CDS GCA 72 bp	AACCTGGTTAATCGGTGTTTTAGGATCTGTGCCATCTaGAACAGGCTGACAAGCTTCTGCTATGGCCTGAAC	+
Preference number: 6 (lower is better) Translates to: NLVNRCFRICAI*NRLTSFCYGLN Trigger: GTTCAGGCCATAGCAGAAGCTTGTCAGCCTGTTGCAGATGGCACAGATCCTAAAACACCGATTAACCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091188.7
CDS CCA 72 bp	TGTGGTGCATGTGACACATGTTCATCGAGGGCATCTTaGTCATCAGGGTCCTCTTCTGGATACAGATCACAA	+
Preference number: 6 (lower is better) Translates to: CGACDTCSSRAS*SSGSSSGYRSQ Trigger: TTGTGATCTGTATCCAGAAGAGGACCCTGATGACCAAGATGCCCTCGATGAACATGTGTCACATGCACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091188.7
CDS CCA 72 bp	CTTGTTCATATGGAGGAGTTGTTGGAGAAGTCTCATTaGAAGAATCAGATGATGAGATCTGGTTCTGTTGGA	+
Preference number: 6 (lower is better) Translates to: LVHMEELLEKSH*KNQMMRSGSVG Trigger: TCCAACAGAACCAGATCTCATCATCTGATTCTTCCAATGAGACTTCTCCAACAACTCCTCCATATGAACAAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091188.7
CDS CCA 72 bp	ATATTCCCATTCACCAACGGCTTCACAAGTAGTTACTaGTGTGCCTATGTAAAACAGTTCAGTCAAACAGTT	+
Preference number: 6 (lower is better) Translates to: IFPFTNGFTSSY*CAYVKQFSQTV Trigger: AACTGTTTGACTGAACTGTTTTACATAGGCACACCAGTAACTACTTGTGAAGCCGTTGGTGAATGGGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091188.7