Pregenerated sensors for USP9X (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031010Ensembl transcript IDs: ENSMUST00000089302.11, ENSMUST00000133997.4, ENSMUST00000169594.9
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCACAAACAAACAAAAATAACTCTGTTCACCTTCCCTCACTCCTaGTCACAACACAGGCCCACTCTTCCTCAAATGAGGGGAACCATG | + |
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Preference number: 1 (lower is better) Translates to: LHKQTKITLFTFPHS*SQHRPTLPQMRGTM Trigger: CATGGTTCCCCTCATTTGAGGAAGAGTGGGCCTGTGTTGTGACCAGGAGTGAGGGAAGGTGAACAGAGTTATTTTTGTTTGTTTGTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR GCA 90 bp | CAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATaGAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTAC | + |
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Preference number: 1 (lower is better) Translates to: QHFCSDLSHPNPFQI*NTHVDAGPILVGPY Trigger: GTAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR TCA 90 bp | CTCATTAGTGACTTTAAAATGTGGTTCACCTTTCCCCCTTACACCTaGAAGCTTGGAGGACAAGTGCTACATACTTCTGCAAACACAAAA | + |
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Preference number: 1 (lower is better) Translates to: LISDFKMWFTFPPYT*KLGGQVLHTSANTK Trigger: TTTTGTGTTTGCAGAAGTATGTAGCACTTGTCCTCCAAGCTTTCAGGTGTAAGGGGGAAAGGTGAACCACATTTTAAAGTCACTAATGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR GCA 90 bp | TCTGTATTTTATAATCTAGGGTTTAAGAAGGAAAGCTCCGAGCAATaGAGGTGTCATGTCAGGACAACTGCAGTCATTATGGTAATATTT | + |
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Preference number: 1 (lower is better) Translates to: SVFYNLGFKKESSEQ*RCHVRTTAVIMVIF Trigger: AAATATTACCATAATGACTGCAGTTGTCCTGACATGACACCTGCATTGCTCGGAGCTTTCCTTCTTAAACCCTAGATTATAAAATACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR CCA 90 bp | CAGATTCTACTGTCTTCAATAGAGCAATCATGCCATTTAGAAATGTaGGAGTACTTCAAACGAAGACTAGTGATTCTGCAACAAACATTT | + |
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Preference number: 1 (lower is better) Translates to: QILLSSIEQSCHLEM*EYFKRRLVILQQTF Trigger: AAATGTTTGTTGCAGAATCACTAGTCTTCGTTTGAAGTACTCCCACATTTCTAAATGGCATGATTGCTCTATTGAAGACAGTAGAATCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR GCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGACTGTAAGGCCTGGGTaGACAGTCTTGATGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQTVRPG*TVLMEP Trigger: TGGTTCCATCAAGACTGTGCACCCAGGCCTTACAGT...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGCTGGGTGCACAGTCTTaGTGGAACCAGTTAATATGT | + |
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Preference number: 2 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQLGAQS*WNQLIC Trigger: ACATATTAACTGGTTCCATCAAGACTGTGCACCCAG...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAAATATGCAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTAGGACTTCCACAGCACTaGGATCCAGCAGAAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: FSNMQHSCRCRTNSGWALGLPQH*DPAEGR Trigger: CCTTCCTTCTGCTGGATCCCAGTGCTGTGGAAGTCC...TAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR TCA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTAAGACTGTGGGATTCTaGGGACTTCCACAGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLKTVGF*GLPQHW Trigger: CCAGTGCTGTGGAAGTCCTCAGAATCCCACAGTCTT...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CCA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTCAAGGTAGGCAACACTaGCTGCAGAGAGCAGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: EHENSVGGGFRNSSNMVFQGRQH*LQRAVG Trigger: ACCTACTGCTCTCTGCAGCCAGTGTTGCCTACCTTG...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR CAA 90 bp | CTGAGGACTTCCACAGCACTGGGATCCAGCAGAAGGAAGGACAGTTaGAAAAAGAGTCACTTAGTAAGCTCTAGCAAAGAACGAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: LRTSTALGSSRRKDS*KKSHLVSSSKERNK Trigger: CTTGTTTCGTTCTTTGCTAGAGCTTACTAAGTGACTCTTTTTCAAACTGTCCTTCCTTCTGCTGGATCCCAGTGCTGTGGAAGTCCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGCTGCAGATAAGACAATaGATAAACTCTCCACTCCAT | + |
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Preference number: 2 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQLQIRQ*INSPLH Trigger: ATGGAGTGGAGAGTTTATTCATTGTCTTATCTGCAG...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCACCTTCCCTCACTCCTGGTCACAACACAGGCCCACTCTTCCTCAAATGAGAAAATTGACTCCAAGTaGCAAACAATGAACAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: VHLPSLLVTTQAHSSSNEKIDSK*QTMNRK Trigger: TTTCCTGTTCATTGTTTGCCACTTGGAGTCAATTTT...CTCATTTGAGGAAGAGTGGGCCTGTGTTGTGACCAGGAGTGAGGGAAGGTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CCA 90 bp | GTTCACCTTCCCTCACTCCTGGTCACAACACAGGCCCACTCTTCCTCAAATGAGCTAGAAGCAGAACTGTaGAATACTGCAAATAAGATA | + |
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Preference number: 2 (lower is better) Translates to: VHLPSLLVTTQAHSSSNELEAEL*NTANKI Trigger: TATCTTATTTGCAGTATTCCACAGTTCTGCTTCTAG...CTCATTTGAGGAAGAGTGGGCCTGTGTTGTGACCAGGAGTGAGGGAAGGTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR CAA 90 bp | GTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTACCAAGTaGTACACAAAAATACTTAGATCCGACTGGGCAAAGCCCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: VGGGFRNSSNMVFTK*YTKILRSDWAKPQF Trigger: AAACTGGGGCTTTGCCCAGTCGGATCTAAGTATTTTTGTGTACAACTTGGTAAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAAATATGCAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTACCAAGTGGCAAACAATaGACAGGAAACTATTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: FSNMQHSCRCRTNSGWALPSGKQ*TGNYWC Trigger: ACACCAATAGTTTCCTGTTCATTGTTTGCCACTTGG...TAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR GCA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTACTTCCAGTTGGAGTTaGAAACACTGTACTTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLTSSWS*KHCTLL Trigger: GAGCAAAGTACAGTGTTTGCAACTCCAACTGGAAGT...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR GCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAAACTGTAAGGCCTGGGTaGACAGTCTTGATGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKTVRPG*TVLMEP Trigger: TGGTTCCATCAAGACTGTGCACCCAGGCCTTACAGT...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CCA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTATCATCTGGAACTGGTaGGCTTATACACTTAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLIIWNW*AYTLKA Trigger: TGCTTTAAGTGTATAAGCCCACCAGTTCCAGATGAT...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATGCAACCTGGGTGCACAGTCTTaGTGGAACCAGTTAATATGT | + |
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Preference number: 2 (lower is better) Translates to: IQHFCSDLSHPNPFQICNLGAQS*WNQLIC Trigger: ACATATTAACTGGTTCCATCAAGACTGTGCACCCAG...GTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTACTCCAGCCAGCATACTaGCATAGCAAATTTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ILRTADNLYVNLLACKRLLQPAY*HSKFLC Trigger: ACACAAAAATTTGCTATGCCAGTATGCTGGCTGGAG...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAAATATGCAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTAGAAACAGCAGCAATATaGTGTTTACCAAGTTGTACA | + |
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Preference number: 2 (lower is better) Translates to: FSNMQHSCRCRTNSGWALETAAI*CLPSCT Trigger: TGTACAACTTGGTAAACACCATATTGCTGCTGTTTC...TAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR GCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAACAACACTCATGTAGATaGAGGACCAATTCTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKQHSCR*RTNSGW Trigger: CCAACCAGAATTGGTCCTGCATCTACATGAGTGTTG...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATGCAACTTGTATTTCTGCCTCTaGGATGCTGAACATGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: IQHFCSDLSHPNPFQICNLYFCL*DAEHEN Trigger: ATTCTCATGTTCAGCATCGCAGAGGCAGAAATACAA...GTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR TCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAACTGCAGATAAGACAATaGATAAACTCTCCACTCCAT | + |
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Preference number: 2 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKLQIRQ*INSPLH Trigger: ATGGAGTGGAGAGTTTATTCATTGTCTTATCTGCAG...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATGCAACGCTCAATTTTGCTTCTaGTTTGATCAATGCCAACTA | + |
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Preference number: 2 (lower is better) Translates to: IQHFCSDLSHPNPFQICNAQFCF*FDQCQL Trigger: TAGTTGGCATTGATCAAAGCAGAAGCAAAATTGAGC...GTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR GCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAAGCAAACACTGTACTTTaGTCAAACTTCAATTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKANTVL*SNFNSG Trigger: GCCTGAATTGAAGTTTGAGCAAAGTACAGTGTTTGC...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR GCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTAGCGCTTACAATAACATaGATCTTAAAATTTCCGGTT | + |
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Preference number: 2 (lower is better) Translates to: ILRTADNLYVNLLACKRLALTIT*ILKFPV Trigger: AACCGGAAATTTTAAGATGCATGTTATTGTAAGCGC...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR GCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTAAACCCTTTTCAAATATaGAACACTCATGTAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: ILRTADNLYVNLLACKRLNPFQI*NTHVDA Trigger: TGCATCTACATGAGTGTTGCATATTTGAAAAGGGTT...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATGCAACTGTGACATGAATGAATaGGCTGTTTTGTTGATGTTG | + |
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Preference number: 2 (lower is better) Translates to: IQHFCSDLSHPNPFQICNCDMNE*AVLLML Trigger: CAACATCAACAAAACAGCCCATTCATTCATGTCACA...GTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAAACTAGAAATAAAAACTaGGCACTTATCGCAAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKTRNKN*ALIAKR Trigger: CCTTTTTGCGATAAGTGCCCAGTTTTTATTTCTAGT...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CAA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCACCTGGGTGCACAGTCTaGATGGAACCAGTTAATATG | + |
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Preference number: 3 (lower is better) Translates to: VKEVIQLPQGRQHWLQRAPGCTV*MEPVNM Trigger: CATATTAACTGGTTCCATCAAGACTGTGCACCCAGG...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
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| 3UTR-3UTR CAA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTCTGAGAACCGCTTCCTaGCCACAGTTCTCCCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: EHENSVGGGFRNSSNMVFLRTAS*PQFSLS Trigger: ACTGAGGGAGAACTGTGGCAAGGAAGCGGTTCTCAG...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR CCA 72 bp | CAAACAAAAATAACTCTGTTCACCTTCCCTCACTCCTaGTCACAACACAGGCCCACTCTTCCTCAAATGAGG | + |
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Preference number: 3 (lower is better) Translates to: QTKITLFTFPHS*SQHRPTLPQMR Trigger: CCTCATTTGAGGAAGAGTGGGCCTGTGTTGTGACCAGGAGTGAGGGAAGGTGAACAGAGTTATTTTTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CAA 90 bp | TTTTCAAATATGCAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTACCTGGGTGCACAGTCTaGATGGAACCAGTTAATATG | + |
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Preference number: 3 (lower is better) Translates to: FSNMQHSCRCRTNSGWALPGCTV*MEPVNM Trigger: CATATTAACTGGTTCCATCAAGACTGTGCACCCAGG...TAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR GCA 72 bp | AAGCTCCGAGCAATGCAGGTGTCATGTCAGGACAACTaGAGTCATTATGGTAATATTTCTTCACTGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: KLRAMQVSCQDN*SHYGNISSLAT Trigger: TGTAGCCAGTGAAGAAATATTACCATAATGACTGCAGTTGTCCTGACATGACACCTGCATTGCTCGGAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR CCA 72 bp | AATGTGGTTCACCTTTCCCCCTTACACCTGAAAGCTTaGAGGACAAGTGCTACATACTTCTGCAAACACAAA | + |
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Preference number: 3 (lower is better) Translates to: NVVHLSPLHLKA*RTSATYFCKHK Trigger: TTTGTGTTTGCAGAAGTATGTAGCACTTGTCCTCCAAGCTTTCAGGTGTAAGGGGGAAAGGTGAACCACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR GCA 72 bp | TATAATCTAGGGTTTAAGAAGGAAAGCTCCGAGCAATaGAGGTGTCATGTCAGGACAACTGCAGTCATTATG | + |
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Preference number: 3 (lower is better) Translates to: YNLGFKKESSEQ*RCHVRTTAVIM Trigger: CATAATGACTGCAGTTGTCCTGACATGACACCTGCATTGCTCGGAGCTTTCCTTCTTAAACCCTAGATTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATGCAACCAGGACCAATTCTGGTaGGGCCCTACAATGAAACCA | + |
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Preference number: 3 (lower is better) Translates to: IQHFCSDLSHPNPFQICNQDQFW*GPTMKP Trigger: TGGTTTCATTGTAGGGCCCAACCAGAATTGGTCCTG...GTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CAA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAAAATCAGCCAGAGACCTaGGTGCAGAGGTACTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKNQPET*VQRYSK Trigger: TTTGGAGTACCTCTGCACCAAGGTCTCTGGCTGATT...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR GCA 72 bp | CACCTGAAAGCTTGGAGGACAAGTGCTACATACTTCTaGAAACACAAAATAATCGTTAGAAATACAATCGGC | + |
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Preference number: 3 (lower is better) Translates to: HLKAWRTSATYF*KHKIIVRNTIG Trigger: GCCGATTGTATTTCTAACGATTATTTTGTGTTTGCAGAAGTATGTAGCACTTGTCCTCCAAGCTTTCAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR GCA 72 bp | TGTAGTGATTTATCACACCCAAACCCTTTTCAAATATaGAACACTCATGTAGATGCAGGACCAATTCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: CSDLSHPNPFQI*NTHVDAGPILV Trigger: AACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR CCA 72 bp | CTGTCTTCAATAGAGCAATCATGCCATTTAGAAATGTaGGAGTACTTCAAACGAAGACTAGTGATTCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: LSSIEQSCHLEM*EYFKRRLVILQ Trigger: TTGCAGAATCACTAGTCTTCGTTTGAAGTACTCCCACATTTCTAAATGGCATGATTGCTCTATTGAAGACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR CCA 72 bp | TTTACCAAGTTGTACACAAAAATACTTAGATCCGACTaGGCAAAGCCCCAGTTTACACAGTTGCACAATAAA | + |
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Preference number: 3 (lower is better) Translates to: FTKLYTKILRSD*AKPQFTQLHNK Trigger: TTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAAGTATTTTTGTGTACAACTTGGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CAA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTTTGCTCATAGTAAAATaGACTCCAAGTGGCAAACAA | + |
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Preference number: 3 (lower is better) Translates to: LIVRELLQHQHPVLQVFSLLIVK*TPSGKQ Trigger: TTGTTTGCCACTTGGAGTCAATTTTACTATGAGCAA...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CAA 90 bp | TGTCTACACATGCTATGCATAGAAATCAGCTTTCCAGAAATATGCAGTCCTCAAAGAAGGAAGGACAGTTaGAAAAAGAGTCACTTAGTA | + |
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Preference number: 3 (lower is better) Translates to: CLHMLCIEISFPEICSPQRRKDS*KKSHLV Trigger: TACTAAGTGACTCTTTTTCAAACTGTCCTTCCTTCT...TTGAGGACTGCATATTTCTGGAAAGCTGATTTCTATGCATAGCATGTGTAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| 3UTR-3UTR CAA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTAAATTTTGCTTCTGCTTaGATCAATGCCAACTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILRTADNLYVNLLACKRLNFASA*INANYS Trigger: GCTATAGTTGGCATTGATCAAAGCAGAAGCAAAATT...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATGCAACCCCCAGTTTACACAGTaGCACAATAAAATCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IQHFCSDLSHPNPFQICNPQFTQ*HNKISS Trigger: TGAAGAGATTTTATTGTGCAACTGTGTAAACTGGGG...GTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | GTTCACCTTCCCTCACTCCTGGTCACAACACAGGCCCACTCTTCCTCAAATGAGGGAGGAGCATCACCTTaGCCTTGCTCATCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHLPSLLVTTQAHSSSNEGGASP*PCSSGG Trigger: TCCTCCTGATGAGCAAGGTCAAGGTGATGCTCCTCC...CTCATTTGAGGAAGAGTGGGCCTGTGTTGTGACCAGGAGTGAGGGAAGGTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | GTTCACCTTCCCTCACTCCTGGTCACAACACAGGCCCACTCTTCCTCAAATGAGGCTCACCCCAAAGCCTaGACTGTTTCCAAAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPSLLVTTQAHSSSNEAHPKA*TVSKIL Trigger: GAGGATTTTGGAAACAGTTCAGGCTTTGGGGTGAGC...CTCATTTGAGGAAGAGTGGGCCTGTGTTGTGACCAGGAGTGAGGGAAGGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGTGTCCGCCACTTGCTTaGCCACTGTGCACAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQCPPLA*PLCTST Trigger: TGTGCTTGTGCACAGTGGTCAAGCAAGTGGCGGACA...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCACGCACGTTCTTGCTGTaGCGCAGGAGAATACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKEVIQLPQGRQHWLQRARTFLL*RRRIHN Trigger: ATTGTGTATTCTCCTGCGTCACAGCAAGAACGTGCG...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | GTTCACCTTCCCTCACTCCTGGTCACAACACAGGCCCACTCTTCCTCAAATGAGCGAGGTCTGGCTCATTaGCTGCATTGGTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHLPSLLVTTQAHSSSNERGLAH*LHWSSH Trigger: ATGAGAAGACCAATGCAGGCAATGAGCCAGACCTCG...CTCATTTGAGGAAGAGTGGGCCTGTGTTGTGACCAGGAGTGAGGGAAGGTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCATCCAAGCCACTCCACTaGCCAGGTCCATTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKEVIQLPQGRQHWLQRASKPLH*PGPFPF Trigger: AAAAGGAAATGGACCTGGGCAGTGGAGTGGCTTGGA...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGTCAGGGGCTTGGCCCTaGTTGTCATTCCCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQSGAWP*LSFPPT Trigger: AGTTGGAGGGAATGACAACCAGGGCCAAGCCCCTGA...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCATTCATCTTCGAGGTCTaGCTCATTGCCTGCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKEVIQLPQGRQHWLQRAFIFEV*LIACIG Trigger: ACCAATGCAGGCAATGAGCCAGACCTCGAAGATGAA...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGTGCTGGGCCTGTATATaGCTGTCCATGCACATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQCWACI*LSMHMV Trigger: AACCATGTGCATGGACAGCCATATACAGGCCCAGCA...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
||
| CDS-3UTR TCA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCAGAGAAGGATTACCATTaGTCGAAGACTGCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKEVIQLPQGRQHWLQRAEKDYH*SKTAFL Trigger: CAAGAATGCAGTCTTCGATCAATGGTAATCCTTCTC...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
||
| CDS-3UTR CCA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTGTCATTCCCTCCAACTaGAGAGCCACGAGTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLVIPSN*RATSRG Trigger: GCCACGACTCGTGGCTCTCCAGTTGGAGGGAATGAC...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCATATCAGCTGACTTTCTaGGTTGACATTATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKEVIQLPQGRQHWLQRAYQLTF*VDIISL Trigger: GAGGGAGATAATGTCAACCCAGAAAGTCAGCTGATA...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGCCCATCGAGGCCTGTTaGTCATATCATCTAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQPIEAC*SYHLTL Trigger: CAAAGTTAGATGATATGATCAACAGGCCTCGATGGG...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTGGATCACCACCTGATTaGCCTGCAGCCTTGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: EHENSVGGGFRNSSNMVFGSPPD*PAALDQ Trigger: TTGGTCCAAGGCTGCAGGTCAATCAGGTGGTGATCC...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTAGCTTCAGGAGACAGGTaGTCTTGCCCTGGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILRTADNLYVNLLACKRLASGDR*SCPGGG Trigger: CCCTCCTCCAGGGCAAGATCACCTGTCTCCTGAAGC...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTATGACGTCCATGCTCTaGAACCTCCCTCCGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLMTSML*NLPPQE Trigger: CTCTTGCGGAGGGAGGTTTCAGAGCATGGACGTCAT...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCACCATTGATCGAAGACTaGATTCTTGAAGAGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: VKEVIQLPQGRQHWLQRAPLIED*ILEETL Trigger: CAATGTCTCTTCAAGAATGCAGTCTTCGATCAATGG...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
||
| CDS-3UTR CCA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTTGTCCATCAGGGGCTTaGCCCTGGTTGTCATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EHENSVGGGFRNSSNMVFCPSGA*PWLSFP Trigger: AGGGAATGACAACCAGGGCCAAGCCCCTGATGGACA...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGTCATCTGGGGCATCTTaGTCATCTGGTTCTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQSSGAS*SSGSLL Trigger: AAGCAAAGAACCAGATGACCAAGATGCCCCAGATGA...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133997.4 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGTTTTTCTCAGGAGTCTaGAAAGCCAGTAGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQFFSGV*KASSSF Trigger: AAAGGAGCTACTGGCTTTTCAGACTCCTGAGAAAAA...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGATCACCTCATCATCATaGCCTATTGTGTCCATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQITSSS*PIVSIR Trigger: ACGAATGGACACAATAGGTCATGATGATGAGGTGAT...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGTCTACTTGCCTGCCCTaGTTTGGAAATCGAACTATA | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQSTCLP*FGNRTI Trigger: TATAGTTCGATTTCCAAACCAGGGCAGGCAAGTAGA...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCAGCTCATTGCCTGCATTaGTCTTCTCATAAATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKEVIQLPQGRQHWLQRAAHCLH*SSHKFL Trigger: CAAAAATTTATGAGAAGACCAATGCAGGCAATGAGC...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGGGCATCTTGGTCATCTaGTTCTTTGCTTTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQGILVI*FFAFFH Trigger: ATGGAAGAAAGCAAAGAACCAGATGACCAAGATGCC...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133997.4 |
||
| CDS-3UTR TCA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTGATGGCATGACAATCTaGTGGGGCCTTGTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: EHENSVGGGFRNSSNMVFDGMTI*WGLVVI Trigger: TATCACCACAAGGCCCCATCAGATTGTCATGCCATC...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTACACATGCTATGCATAGAAATCAGCTTTCCAGAAATATGCAGTCCTCAACACACAGGAATGGCCTaGTCAGCAGGGAGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLHMLCIEISFPEICSPQHTGMA*SAGSSP Trigger: TGGAGAACTCCCTGCTGAGCAGGCCATTCCTGTGTG...TTGAGGACTGCATATTTCTGGAAAGCTGATTTCTATGCATAGCATGTGTAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTGTAATGTCCGCCACTTaGTTGACCACTGTGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: EHENSVGGGFRNSSNMVFVMSAT*LTTVHK Trigger: CTTGTGCACAGTGGTCAAGCAAGTGGCGGACATTAC...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGCCATTGATCGAAGACTaGATTCTTGAAGAGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQPLIED*ILEETL Trigger: CAATGTCTCTTCAAGAATGCAGTCTTCGATCAATGG...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCAAATATGCAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTATGCTGGGCCTGTATATaGCTGTCCATGCACATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSNMQHSCRCRTNSGWALCWACI*LSMHMV Trigger: AACCATGTGCATGGACAGCCATATACAGGCCCAGCA...TAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | TTTTCAAATATGCAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTAATTAATTGTGGCTGGTaGACCACACACAGGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSNMQHSCRCRTNSGWALINCGW*TTHRNG Trigger: GCCATTCCTGTGTGTGGTTCACCAGCCACAATTAAT...TAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTTTGCTCTCGTTGTCCTaGTTCTCATCCCCAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLLLSLS*FSSPDI Trigger: TATGTCTGGGGATGAGAAGCAGGACAACGAGAGCAA...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| 3UTR CAA 72 bp | AAATGTGGTTCACCTTTCCCCCTTACACCTGAAAGCTaGGAGGACAAGTGCTACATACTTCTGCAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: KCGSPFPLTPES*EDKCYILLQTQ Trigger: TTGTGTTTGCAGAAGTATGTAGCACTTGTCCTCCAAGCTTTCAGGTGTAAGGGGGAAAGGTGAACCACATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | ATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATGCAACTCATGGATCACCACCTaGTTGACCTGCAGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IQHFCSDLSHPNPFQICNSWITT*LTCSLG Trigger: TCCAAGGCTGCAGGTCAATCAGGTGGTGATCCATGA...GTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTTCATCAGAAATCTGCTaGGCAAGGCGAACAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: LIVRELLQHQHPVLQVFSSSEIC*ARRTDT Trigger: CGTGTCTGTTCGCCTTGCTCAGCAGATTTCTGATGA...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTCTTCTTCATTTGGGCTaGATACCAGCTGTAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLLLHLG*IPAVIL Trigger: GAGGATTACAGCTGGTATTCAGCCCAAATGAAGAAG...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTATGTTTCCCTGCCTGTaGTGCCCAGATATTATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLMFPCL*CPDIIK Trigger: CTTGATAATATCTGGGCAGCACAGGCAGGGAAACAT...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTAGGCTTCATGTTTCCCTaGCTGTGCTGCCCAGATATT | + |
|
Preference number: 4 (lower is better) Translates to: ILRTADNLYVNLLACKRLGFMFP*LCCPDI Trigger: AATATCTGGGCAGCACAGGCAGGGAAACATGAAGCC...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTTCCAAGCCACTCCACTaGCCAGGTCCATTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIVRELLQHQHPVLQVFSSKPLH*PGPFPF Trigger: AAAAGGAAATGGACCTGGGCAGTGGAGTGGCTTGGA...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTTCATCTGGGGCATCTTaGTCATCTGGTTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIVRELLQHQHPVLQVFSSSGAS*SSGSSS Trigger: TGAGGAGGAACCAGATGACCAAGATGCCCCAGATGA...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | TTTTCAAATATGCAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTATGGATGCGGGAAAGATaGAGTCGTCGATTAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSNMQHSCRCRTNSGWALWMRER*SRRLIL Trigger: AAGAATTAATCGACGACTTCATCTTTCCCGCATCCA...TAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTAGCTGACTTTCTGGGTTaGCATTATCTCCCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILRTADNLYVNLLACKRLADFLG*HYLPPV Trigger: AACTGGAGGGAGATAATGTCAACCCAGAAAGTCAGC...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | TTTTCAAATATGCAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTAGAGAAGGATTACCATTaGTCGAAGACTGCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSNMQHSCRCRTNSGWALEKDYH*SKTAFL Trigger: CAAGAATGCAGTCTTCGATCAATGGTAATCCTTCTC...TAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TTTTCAAATATGCAACACTCATGTAGATGCAGGACCAATTCTGGTTGGGCCCTAGTCTGGCTCATTGCCTaGATTGGTCTTCTCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSNMQHSCRCRTNSGWALVWLIA*IGLLIN Trigger: ATTTATGAGAAGACCAATGCAGGCAATGAGCCAGAC...TAGGGCCCAACCAGAATTGGTCCTGCATCTACATGAGTGTTGCATATTTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTCAGGAGAATACACAATaGATCATACCAATCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EHENSVGGGFRNSSNMVFQENTQ*IIPITG Trigger: GCCAGTGATTGGTATGATGCATTGTGTATTCTCCTG...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTTTTCCACTTCTGGATTaGGGCCATCACTGTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: EHENSVGGGFRNSSNMVFFPLLD*GHHCND Trigger: ATCATTACAGTGATGGCCCCAATCCAGAAGTGGAAA...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAAGGCATCTTGGTCATCTaGTTCCTCCTCAGGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKGILVI*FLLRTE Trigger: CTCTGTCCTGAGGAGGAACCAGATGACCAAGATGCC...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTAAGCATGCATTCAGATaGTGGGTTAGGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIVRELLQHQHPVLQVFSKHAFR*WVRNAL Trigger: CAGAGCATTCCTAACCCATCATCTGAATGCATGCTT...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTCTTCCAGCCACTCACTaGTTCATCTGTCAGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIVRELLQHQHPVLQVFSLPATH*FICQDF Trigger: AAAATCCTGACAGATGAAGCAGTGAGTGGCTGGAAG...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTGAAGAATTGTTCCTGTaGCACTTGACGAACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLEELFL*HLTNSF Trigger: AAAACTGTTCGTCAAGTGGCACAGGAACAATTCTTC...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTCTGCCACTCCTAAATTaGCATACATTACGAACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EHENSVGGGFRNSSNMVFLPLLN*HTLRTS Trigger: ACTTGTTCGTAATGTATGCCAATTTAGGAGTGGCAG...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAAAGTAAAGTAGTCGCCTaGGTGTTTAGCCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKSKVVA*VFSPLS Trigger: AGAGAGAGGGCTAAACACTCAGGCGACTACTTTACT...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTATTCTCGCTTTCAGACTaGTCATTCTGTTGTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILRTADNLYVNLLACKRLFSLSD*SFCCIS Trigger: GCTGATACAACAGAATGAGCAGTCTGAAAGCGAGAA...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTACACATGCTATGCATAGAAATCAGCTTTCCAGAAATATGCAGTCCTCAACATAGTGATTTCTTCTaGTTCAGGAGACAGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: CLHMLCIEISFPEICSPQHSDFF*FRRQVI Trigger: GATCACCTGTCTCCTGAAGCAGAAGAAATCACTATG...TTGAGGACTGCATATTTCTGGAAAGCTGATTTCTATGCATAGCATGTGTAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTTATTGTCGTACTATCTaGCGGCATAAGTTTCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: EHENSVGGGFRNSSNMVFYCRTI*RHKFHK Trigger: CTTATGAAACTTATGCCGCCAGATAGTACGACAATA...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTACATCATACCAATCACTaGCAGATCCTCGGACTATTT | + |
|
Preference number: 4 (lower is better) Translates to: ILRTADNLYVNLLACKRLHHTNH*QILGLF Trigger: AAATAGTCCGAGGATCTGCCAGTGATTGGTATGATG...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTAATGGTATCATTTGTATaGGACCAAACCTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILRTADNLYVNLLACKRLMVSFV*DQTSKS Trigger: TGACTTGGAGGTTTGGTCTCATACAAATGATACCAT...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTATTCCCACTCAGTAAGTaGTTCACAAGTAGTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILRTADNLYVNLLACKRLFPLSK*FTSSYC Trigger: GCAATAACTACTTGTGAAGCACTTACTGAGTGGGAA...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAACAGGGGAATTTTCATTaGACGAATCAGGCGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKQGNFH*TNQAMK Trigger: CTTCATCGCCTGATTCGTCCAATGAAAATTCCCCTG...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTACACATGCTATGCATAGAAATCAGCTTTCCAGAAATATGCAGTCCTCAATTTCTCTACATACTGTaGTTGATGAAGGCTATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CLHMLCIEISFPEICSPQFLYIL*LMKAIS Trigger: CGAGATAGCCTTCATCAACCACAGTATGTAGAGAAA...TTGAGGACTGCATATTTCTGGAAAGCTGATTTCTATGCATAGCATGTGTAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTTGCCATACATTCTCATaGTTTCCATGTAAGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIVRELLQHQHPVLQVFSCHTFS*FPCKLQ Trigger: TTGCAACTTACATGGAAAGCATGAGAATGTATGGCA...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTACACATGCTATGCATAGAAATCAGCTTTCCAGAAATATGCAGTCCTCAAAGTCTTCATTGTCTCTaGCATACATTCTCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLHMLCIEISFPEICSPQSLHCL*HTFSCF Trigger: AAAGCATGAGAATGTATGGCAGAGACAATGAAGACT...TTGAGGACTGCATATTTCTGGAAAGCTGATTTCTATGCATAGCATGTGTAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR GCA 90 bp | ATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATGCAACCAAGTCTGTATTTTGTaGTTCCTGCTTTCTCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQHFCSDLSHPNPFQICNQVCIL*FLLSRF Trigger: AAAGCGAGAAAGCAGGAAGCACAAAATACAGACTTG...GTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATTCTGTTGTATCAGCTaGCTTTCTGGGTTGACATTA | + |
|
Preference number: 4 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKFCCIS*LSGLTL Trigger: TAATGTCAACCCAGAAAGTCAGCTGATACAACAGAA...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CCA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTGAATCCAGAAGATTTTaGTGGTTTCTAATGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LIVRELLQHQHPVLQVFSESRRF*WFLMST Trigger: TGTAGACATTAGAAACCACCAAAATCTTCTGGATTC...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR TCA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAAGACAATTCACAGCTTTaGAGAATCTCTCAAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKDNSQL*RISQNT Trigger: AGTGTTTTGAGAGATTCTTCAAAGCTGTGAATTGTC...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCAGGGGCTTGGCCCTGGTaGTCATTCCCTCCAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VKEVIQLPQGRQHWLQRAGAWPW*SFPPTG Trigger: TCCAGTTGGAGGGAATGACAACCAGGGCCAAGCCCC...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GTTCACCTTCCCTCACTCCTGGTCACAACACAGGCCCACTCTTCCTCAAATGAGCTGTCCATCAGGGGCTaGGCCCTGGTTGTCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VHLPSLLVTTQAHSSSNELSIRG*ALVVIP Trigger: GGGAATGACAACCAGGGCCAAGCCCCTGATGGACAG...CTCATTTGAGGAAGAGTGGGCCTGTGTTGTGACCAGGAGTGAGGGAAGGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCAATGTCCGCCACTTGCTaGACCACTGTGCACAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKEVIQLPQGRQHWLQRAMSATC*TTVHKH Trigger: GTGCTTGTGCACAGTGGTCAAGCAAGTGGCGGACAT...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GTTCACCTTCCCTCACTCCTGGTCACAACACAGGCCCACTCTTCCTCAAATGAGTTGATCATGAGTTACTaGGTTGACCGATGTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHLPSLLVTTQAHSSSNELIMSY*VDRCHR Trigger: CCTATGACATCGGTCAACCAAGTAACTCATGATCAA...CTCATTTGAGGAAGAGTGGGCCTGTGTTGTGACCAGGAGTGAGGGAAGGTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGTTGTTCCTGTGCCACTaGACGAACAGTTTTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQLFLCH*TNSFAV Trigger: CACAGCAAAACTGTTCGTCAAGTGGCACAGGAACAA...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGCACAAAAGCGAAGCAATTaGACGGTCTCATCAGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VKEVIQLPQGRQHWLQRAQKRSN*TVSSEL Trigger: TAACTCTGATGAGACCGTCAAATTGCTTCGCTTTTG...TGCTCTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGATTCTTGAAGAGACATaGCAACAGCGGATGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQILEET*QQRMSC Trigger: ACAGCTCATCCGCTGTTGCAATGTCTCTTCAAGAAT...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
||
| CDS-3UTR CAA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTCTCATCTGGGGCATCTaGGTCATCTGGTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLLIWGI*VIWFLL Trigger: GAGGAGGAACCAGATGACCAAGATGCCCCAGATGAG...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGCAAAAGCGAAGCAATTaGACGGTCTCATCAGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQQKRSN*TVSSEL Trigger: TAACTCTGATGAGACCGTCAAATTGCTTCGCTTTTG...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
||
| CDS-3UTR CAA 90 bp | TGTCTACACATGCTATGCATAGAAATCAGCTTTCCAGAAATATGCAGTCCTCAATGGAGGAGCATCACCTaGACCTTGCTCATCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLHMLCIEISFPEICSPQWRSIT*TLLIRR Trigger: CCTCCTGATGAGCAAGGTCAAGGTGATGCTCCTCCA...TTGAGGACTGCATATTTCTGGAAAGCTGATTTCTATGCATAGCATGTGTAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTACCACTAGCCAACCTTTaGGTGATCGAGGGTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILRTADNLYVNLLACKRLPLANL*VIEGLE Trigger: CTCCAGACCCTCGATCACCAAAAGGTTGGCTAGTGG...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTAATCCACTGGATCTTTaGGGTGTCCCGGTCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LIVRELLQHQHPVLQVFSNPLDL*GVPVLG Trigger: TCCCAGGACCGGGACACCCAAAAGATCCAGTGGATT...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GAACATGAGAATTCGGTAGGTGGAGGGTTTAGAAACAGCAGCAATATGGTGTTTTCAACATTGCTCTCGTaGTCCTGCTTCTCATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EHENSVGGGFRNSSNMVFSTLLS*SCFSSP Trigger: TGGGGATGAGAAGCAGGACAACGAGAGCAATGTTGA...AAACACCATATTGCTGCTGTTTCTAAACCCTCCACCTACCGAATTCTCATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGAGAGAAGGATTACCATaGATCGAAGACTGCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQREGLP*IEDCIL Trigger: AAGAATGCAGTCTTCGATCAATGGTAATCCTTCTCT...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000133997.4 |
||
| CDS-3UTR CAA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTTTTTACAGTTTCTTCTaGTCCAGGAACCCGCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLFYSFF*SRNPRS Trigger: GCTTCGCGGGTTCCTGGACAAGAAGAAACTGTAAAA...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGTAAAGGAGGTGATCCAACTGCCACAAGGTAGGCAACACTGGCTGCAGTATCAGGCATATATCTaGAAGCCTCATCAGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VFVKEVIQLPQGRQHWLQYQAYI*KPHQKS Trigger: AGATTTCTGATGAGGCTTCAAGATATATGCCTGATA...CTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTCCACAAGTCTGTATTTaGTGCTTCCTGCTTTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLPQVCI*CFLLSR Trigger: GCGAGAAAGCAGGAAGCACAAAATACAGACTTGTGG...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTAGCAGGGGAATTTTCATaGGACGAATCAGGCGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILRTADNLYVNLLACKRLAGEFS*DESGDE Trigger: TTCATCGCCTGATTCGTCCAATGAAAATTCCCCTGC...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | TGTCTACACATGCTATGCATAGAAATCAGCTTTCCAGAAATATGCAGTCCTCAAGGGACTTCGCTGACTTaGACTCAAATTTTGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLHMLCIEISFPEICSPQGTSLT*TQILRC Trigger: GCACCTCAAAATTTGAGTCAAAGTCAGCGAAGTCCC...TTGAGGACTGCATATTTCTGGAAAGCTGATTTCTATGCATAGCATGTGTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATCCCTGGGATCAACATaGCTCTCGTTGTCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKSLGST*LSLSCF Trigger: GAAGCAGGACAACGAGAGCAATGTTGATCCCAGGGA...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | TTAGATCCGACTGGGCAAAGCCCCAGTTTACACAGTTGCACAATAAAATCTCTTTCTGCCACTCCTAAATaGGCATACATTACGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LDPTGQSPSLHSCTIKSLSATPK*AYITNK Trigger: CTTGTTCGTAATGTATGCCAATTTAGGAGTGGCAGA...AAGAGATTTTATTGTGCAACTGTGTAAACTGGGGCTTTGCCCAGTCGGATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTATCCCAGTCTCACAGTTaGTGGGTCATAGTCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ILRTADNLYVNLLACKRLSQSHS*WVIVFI Trigger: AATGAAGACTATGACCCACAAACTGTGAGACTGGGA...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
||
| CDS-3UTR CAA 90 bp | ATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATATGCAACGAGCATCTAAGGCTGTaGGAATCAAGGCGAAACACA | + |
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Preference number: 5 (lower is better) Translates to: IQHFCSDLSHPNPFQICNEHLRL*ESRRNT Trigger: TGTGTTTCGCCTTGATTCCAACAGCCTTAGATGCTC...GTTGCATATTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS-3UTR CAA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTACGACAATTCACAGCTTaGAAGAATCTCTCAAAACAC | + |
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Preference number: 5 (lower is better) Translates to: ILRTADNLYVNLLACKRLRQFTA*KNLSKH Trigger: GTGTTTTGAGAGATTCTTCAAAGCTGTGAATTGTCG...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS-3UTR CAA 90 bp | TTGATTGTTAGGGAACTTTTACAGCATCAACATCCGGTTCTCCAAGTCTTTAGTTGTAGGCTCTTCTTTTaGCTACTAGTTTTCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LIVRELLQHQHPVLQVFSCRLFF*LLVFLL Trigger: GAGAAGGAAAACTAGTAGCAAAAAGAAGAGCCTACA...ACTAAAGACTTGGAGAACCGGATGTTGATGCTGTAAAAGTTCCCTAACAATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS-3UTR CAA 90 bp | ATCTTACGAACTGCGGACAATCTTTATGTCAATCTGTTGGCTTGTAAAAGGCTAAGAGAAGGATTACCATaGATCGAAGACTGCATTCTT | + |
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Preference number: 5 (lower is better) Translates to: ILRTADNLYVNLLACKRLREGLP*IEDCIL Trigger: AAGAATGCAGTCTTCGATCAATGGTAATCCTTCTCT...TAGCCTTTTACAAGCCAACAGATTGACATAAAGATTGTCCGCAGTTCGTAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS-3UTR CAA 90 bp | TGTCTACACATGCTATGCATAGAAATCAGCTTTCCAGAAATATGCAGTCCTCAACATCATCATGACCTATaGTGTCCATTCGTTCATAAA | + |
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Preference number: 5 (lower is better) Translates to: CLHMLCIEISFPEICSPQHHHDL*CPFVHK Trigger: TTTATGAACGAATGGACACAATAGGTCATGATGATG...TTGAGGACTGCATATTTCTGGAAAGCTGATTTCTATGCATAGCATGTGTAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS-3UTR CAA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAATCATATCATCTAACTTaGCCAAGTCAGTGTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKSYHLT*PSQCVE Trigger: TTCCACACACTGACTTGGCAAAGTTAGATGATATGA...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS-3UTR CAA 90 bp | CTTAATACATTCAGCACTTCTGTAGTGATTTATCACACCCAAACCCTTTTCAAACACAATGATAAGCATTaGCTCCTTCTAGTAAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: LNTFSTSVVIYHTQTLFKHNDKH*LLLVSL Trigger: GAGACTTACTAGAAGGAGCAAATGCTTATCATTGTG...TTTGAAAAGGGTTTGGGTGTGATAAATCACTACAGAAGTGCTGAATGTATTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS TCA 72 bp | GGTTCCTCATCTTCAATCTGTGGAGGAGCATCACCTTaGCCTTGCTCATCAGGAGGAGTTGCAGGGGAATTT | + |
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Preference number: 6 (lower is better) Translates to: GSSSSICGGASP*PCSSGGVAGEF Trigger: AAATTCCCCTGCAACTCCTCCTGATGAGCAAGGTCAAGGTGATGCTCCTCCACAGATTGAAGATGAGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000169594.9 |
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| CDS CAA 72 bp | AGGTTCCTCATCTTCAATCTGTGGAGGAGCATCACCTaGACCTTGCTCATCAGGAGGAGTTGCAGGGGAATT | + |
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Preference number: 6 (lower is better) Translates to: RFLIFNLWRSIT*TLLIRRSCRGI Trigger: AATTCCCCTGCAACTCCTCCTGATGAGCAAGGTCAAGGTGATGCTCCTCCACAGATTGAAGATGAGGAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000169594.9 |
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| CDS GCA 72 bp | TTAATTGTGGCTGGTGAACCACACACAGGAATGGCCTaGTCAGCAGGGAGTTCTCCATTTCTCATATACTGC | + |
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Preference number: 6 (lower is better) Translates to: LIVAGEPHTGMA*SAGSSPFLIYC Trigger: GCAGTATATGAGAAATGGAGAACTCCCTGCTGAGCAGGCCATTCCTGTGTGTGGTTCACCAGCCACAATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS TCA 72 bp | CGAACACTTCTTTCAATGGCGGATGGCATGACAATCTaGTGGGGCCTTGTGGTGATAGCAATCTCTGATATG | + |
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Preference number: 6 (lower is better) Translates to: RTLLSMADGMTI*WGLVVIAISDM Trigger: CATATCAGAGATTGCTATCACCACAAGGCCCCATCAGATTGTCATGCCATCCGCCATTGAAAGAAGTGTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS GCA 72 bp | GAAAACTATGAGCTTTGCAAATGCACCTCTCACTTCTaGACTAGGGCATTCCAAAAGGTACTCAGAGAATCG | + |
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Preference number: 6 (lower is better) Translates to: ENYELCKCTSHF*TRAFQKVLRES Trigger: CGATTCTCTGAGTACCTTTTGGAATGCCCTAGTGCAGAAGTGAGAGGTGCATTTGCAAAGCTCATAGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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| CDS TCA 72 bp | TTCATCCTCAGAACTGCCATGCCGATGGGTATAGTATaGCACACTGGAAATCACCTTATTAACCTCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: FILRTAMPMGIV*HTGNHLINLIQ Trigger: CTGAATGAGGTTAATAAGGTGATTTCCAGTGTGTCATACTATACCCATCGGCATGGCAGTTCTGAGGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089302.11 ENSMUST00000169594.9 |
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| CDS TCA 72 bp | GAAAATATTCCAGACTGTACTGCATTCGGTTGTGCATaGACTGAACATTCTGCTTCCGAACACTTCTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: ENIPDCTAFGCA*TEHSASEHFFQ Trigger: TTGAAAGAAGTGTTCGGAAGCAGAATGTTCAGTTCATGCACAACCGAATGCAGTACAGTCTGGAATATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089302.11 |
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