Pregenerated sensors for USP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027363Ensembl transcript IDs: ENSMUST00000028841.14, ENSMUST00000110416.3
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCGGAAAATGGAGGTTATaGTGGTTTGGTACCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LEHSECTELGLEMRRGWSGKWRL*WFGTKR Trigger: TCTCTTGGTACCAAACCATCATAACCTCCATTTTCC...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| 3UTR-3UTR TCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCGGAAAATGGAGGTTATaGTGGTTTGGTACCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VILEHSECTELGLEMRRGGKWRL*WFGTKR Trigger: TCTCTTGGTACCAAACCATCATAACCTCCATTTTCC...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCAGCTGCTTGTGCTTCTaGCAGGCGTGCTCGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSSCLCF*QACSAA Trigger: GGCGGCCGAGCACGCCTGGCAGAAGCACAAGCAGCT...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGAAGCTGCTTGTGCTTCTaGCAGGCGTGCTCGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGSCLCF*QACSAA Trigger: GGCGGCCGAGCACGCCTGGCAGAAGCACAAGCAGCT...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGAACCTCCTGCGGCAGGTaGGGCACTGCACTGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGTSCGR*GTALWT Trigger: AGTCCACAGTGCAGTGCCTCACCTGCCGCAGGAGGT...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCACCTCCTGCGGCAGGTaGGGCACTGCACTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGTSCGR*GTALWT Trigger: AGTCCACAGTGCAGTGCCTCACCTGCCGCAGGAGGT...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCGACCATCGGGGTCACTaGCGGCCTCCTCTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGDHRGH*RPPLLL Trigger: GAGGAGAAGAGGAGGCCGGCAGTGACCCCGATGGTC...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGCGTGCTCGGCCGCCTaGAGGTCATCCAGGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCACSAA*RSSRCS Trigger: CGAGCACCTGGATGACCTGCAGGCGGCCGAGCACGC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGCGTGCTCGGCCGCCTaGAGGTCATCCAGGTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSACSAA*RSSRCS Trigger: CGAGCACCTGGATGACCTGCAGGCGGCCGAGCACGC...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGAGTGAGGCTTCAGCTCTaGGAGCCGCACCAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGVRLQL*EPHQVQ Trigger: CTGGACCTGGTGCGGCTCCCAGAGCTGAAGCCTCAC...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCACTGTGGACTTGAACTaGCCCTGGAACAGGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSTVDLN*PWNRAT Trigger: CGTGGCCCTGTTCCAGGGCCAGTTCAAGTCCACAGT...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCGTAGCAGGCGCTGGCTaGATTATGGGTGAGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSVAGAG*IMGEAS Trigger: TGAAGCCTCACCCATAATTCAGCCAGCGCCTGCTAC...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTCAGGGACCTGGGGCTTaGCTTTGTGAGTGGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSQGPGA*LCEWAG Trigger: CCCCGCCCACTCACAAAGTCAAGCCCCAGGTCCCTG...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTCAGGGACCTGGGGCTTaGCTTTGTGAGTGGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCQGPGA*LCEWAG Trigger: CCCCGCCCACTCACAAAGTCAAGCCCCAGGTCCCTG...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGATCTGCTGGCCTCTTCTaGGCCTCTGACGTGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGSAGLF*ASDVGH Trigger: GTGTCCCACGTCAGAGGCGCAGAAGAGGCCAGCAGA...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGCAGGGGACACATCTaGTGGCCTCTTCTGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGCRGHI*WPLLRL Trigger: GAGGCGCAGAAGAGGCCAGCAGATGTGTCCCCTGCA...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGATGCAGGGGACACATCTaGTGGCCTCTTCTGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGCRGHI*WPLLRL Trigger: GAGGCGCAGAAGAGGCCAGCAGATGTGTCCCCTGCA...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCATGGACTCGTTGAGCTaGTTGTGCTTCTGCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSMDSLS*LCFCQA Trigger: CGCCTGGCAGAAGCACAAGCAGCTCAACGAGTCCAT...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCTGCCTTTTCTGTTGCTaGAGCTGCTCTTCCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSCLFCC*SCSSSR Trigger: ACGGGAGGAAGAGCAGCTGCAGCAACAGAAAAGGCA...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCTCCTGCCTTTTCTGTTaGTGCAGCTGCTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSSCLFC*CSCSSS Trigger: GGAGGAAGAGCAGCTGCAGCAACAGAAAAGGCAGGA...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGACCATCGGGGTCACTaGCGGCCTCCTCTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCDHRGH*RPPLLL Trigger: GAGGAGAAGAGGAGGCCGGCAGTGACCCCGATGGTC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGTGAGGCTTCAGCTCTaGGAGCCGCACCAGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSVRLQL*EPHQVQ Trigger: CTGGACCTGGTGCGGCTCCCAGAGCTGAAGCCTCAC...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGAGTCTTTGTGTTCCTGTaGCTTCCTGGGCCCCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGVFVFL*LPGPRL Trigger: CAGACGGGGCCCAGGAAGCCACAGGAACACAAAGAC...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGCGCTTCAGTTTCGATaGCTCCCTGTCCCGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSALQFR*LPVPLG Trigger: GCCGAGCGGGACAGGGAGCCATCGAAACTGAAGCGC...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGGCGCTTCAGTTTCGATaGCTCCCTGTCCCGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVALQFR*LPVPLG Trigger: GCCGAGCGGGACAGGGAGCCATCGAAACTGAAGCGC...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGAGTCAAAGGTTCTCGCTaGGCCTTGCCTGCATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGVKGSR*ALPAFS Trigger: GCTGAATGCAGGCAAGGCTCAGCGAGAACCTTTGAC...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGTTCCTGTGGCTTCCTaGGCCCCGTCTGCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSVPVAS*APSAES Trigger: GCTTTCAGCAGACGGGGCCCAGGAAGCCACAGGAAC...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGTTCCTGTGGCTTCCTaGGCCCCGTCTGCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCVPVAS*APSAES Trigger: GCTTTCAGCAGACGGGGCCCAGGAAGCCACAGGAAC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCTTGGATCAAGAAACTTaGCCCAGCCCAAAGGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSLDQET*PSPKAV Trigger: GACTGCCTTTGGGCTGGGCCAAGTTTCTTGATCCAA...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCTCCTTTGCTTTGTGCTaGTTCTCAGTGGAGTCACGT | + |
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Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSSFALC*FSVESR Trigger: ACGTGACTCCACTGAGAATCAGCACAAAGCAAAGGA...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGACTGAGTGATATCTGGTaGGGAGTAGGAGCGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGLSDIW*GVGALQ Trigger: CTGAAGCGCTCCTACTCCTCACCAGATATCACTCAG...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGATCCTGCCTTTTCTGTTaGTGCAGCTGCTCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGSCLFC*CSCSSS Trigger: GGAGGAAGAGCAGCTGCAGCAACAGAAAAGGCAGGA...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTCTCTCCCCATCTCCTaGCTTTTCTGTTGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGSLPIS*LFCCCS Trigger: GCTGCAGCAACAGAAAAGGCAGGAGATGGGGAGAGA...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTTCGTTGAGCTGCTTGTaGTTCTGCCAGGCGTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSSLSCL*FCQACS Trigger: CGAGCACGCCTGGCAGAAGCACAAGCAGCTCAACGA...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCGTTGAGCTGCTTGTaGTTCTGCCAGGCGTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCSLSCL*FCQACS Trigger: CGAGCACGCCTGGCAGAAGCACAAGCAGCTCAACGA...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCTGGCTACATCAGTTATaGGTGGTCCCAGGGAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSWLHQL*VVPGKY Trigger: ATACTTCCCTGGGACCACGCATAACTGATGTAGCCA...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGGTCTTTGTGTTCCTGTaGCTTCCTGGGCCCCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVVFVFL*LPGPRL Trigger: CAGACGGGGCCCAGGAAGCCACAGGAACACAAAGAC...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGACTGTGGACTTGAACTaGCCCTGGAACAGGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVTVDLN*PWNRAT Trigger: CGTGGCCCTGTTCCAGGGCCAGTTCAAGTCCACAGT...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTGGCTGAATTATGGGTaGGGCTTCAGCTCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCWLNYG*GFSSGS Trigger: GCTCCCAGAGCTGAAGCCTCACCCATAATTCAGCCA...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGGCTGAATTATGGGTaGGGCTTCAGCTCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVWLNYG*GFSSGS Trigger: GCTCCCAGAGCTGAAGCCTCACCCATAATTCAGCCA...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGGTAGCAGGCGCTGGCTaGATTATGGGTGAGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVVAGAG*IMGEAS Trigger: TGAAGCCTCACCCATAATTCAGCCAGCGCCTGCTAC...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR TCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGGTCAAAGGTTCTCGCTaGGCCTTGCCTGCATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVVKGSR*ALPAFS Trigger: GCTGAATGCAGGCAAGGCTCAGCGAGAACCTTTGAC...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGAGTGTCTTTCCAGCTTTaGGCTCTTGTTCCTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGVSFQL*ALVPPF Trigger: GAAGGGAGGAACAAGAGCGCAAAGCTGGAAAGACAC...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR GCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGAGGAGTCACGTTCATCTaGATCCTGTGTCTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGGVTFI*ILCLSS Trigger: GCTGGAAAGACACAGGATGCAGATGAACGTGACTCC...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGTTCTCGCTGAGCCTTaGCTGCATTCAGCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCVLAEP*LHSALL Trigger: CAGGAGAGCTGAATGCAGGCAAGGCTCAGCGAGAAC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGTTCTCGCTGAGCCTTaGCTGCATTCAGCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSVLAEP*LHSALL Trigger: CAGGAGAGCTGAATGCAGGCAAGGCTCAGCGAGAAC...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTATGGACTCGTTGAGCTaGTTGTGCTTCTGCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSMDSLS*LCFCQA Trigger: CGCCTGGCAGAAGCACAAGCAGCTCAACGAGTCCAT...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTTCTGCTCCGAGGGGGTaGAGTGACCTTAGCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSSAPRG*SDLSIG Trigger: ACCAATGCTAAGGTCACTCCACCCCCTCGGAGCAGA...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTCTGCTCCGAGGGGGTaGAGTGACCTTAGCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVSAPRG*SDLSIG Trigger: ACCAATGCTAAGGTCACTCCACCCCCTCGGAGCAGA...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCAGCTTTAGGGTAACATaGTGGCTTGTTTTCCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSSFRVT*WLVFPV Trigger: AACCGGGAAAACAAGCCACCATGTTACCCTAAAGCT...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCGTGAATCCTGTTGGCTaGAGCCTGCAAACTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGVNPVG*SLQTGH Trigger: ATGACCAGTTTGCAGGCTCCAGCCAACAGGATTCAC...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTCTTGTGAATCCTGTTaGCTGGAGCCTGCAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGSCESC*LEPANW Trigger: CCAGTTTGCAGGCTCCAGCCAACAGGATTCACAAGA...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCATTCTTCTGCTGTCTTaGAGATCTTCTGCGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGILLLS*RSSARC Trigger: ACAGCGCGCAGAAGATCTTCAAGACAGCAGAAGAAT...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTCCTTTGCTTTGTGCTaGTTCTCAGTGGAGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGSFALC*FSVESR Trigger: ACGTGACTCCACTGAGAATCAGCACAAAGCAAAGGA...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTCTGAGTGATATCTGGTaGGGAGTAGGAGCGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCLSDIW*GVGALQ Trigger: CTGAAGCGCTCCTACTCCTCACCAGATATCACTCAG...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTCATGCAGGCCATCCATaGGGAACAGAAGCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCHAGHP*GTEAAL Trigger: AAGAGCTGCTTCTGTTCCTCATGGATGGCCTGCATG...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGCATGCAGGCCATCCATaGGGAACAGAAGCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVHAGHP*GTEAAL Trigger: AAGAGCTGCTTCTGTTCCTCATGGATGGCCTGCATG...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGCCTTTTCTGTTGCTaGAGCTGCTCTTCCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVCLFCC*SCSSSR Trigger: ACGGGAGGAAGAGCAGCTGCAGCAACAGAAAAGGCA...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCCTCTTGTCCATCCTTTaGTTTGTGCTGATTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSLLSIL*FVLILS Trigger: ACTGAGAATCAGCACAAAGCAAAGGATGGACAAGAG...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTTGTTCTCTTCCTTGTaGCTCTTCCGATTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGLFSSL*LFRLSA Trigger: GGCTGACAATCGGAAGAGGCACAAGGAAGAGAACAA...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGATTGTTCTCTTCCTTGTaGCTCTTCCGATTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGLFSSL*LFRLSA Trigger: GGCTGACAATCGGAAGAGGCACAAGGAAGAGAACAA...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCGAGCTCGGCAATGGCTaGAGTAAAATCTGTTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSELGNG*SKICCY Trigger: ATAACAACAGATTTTACTGCAGCCATTGCCGAGCTC...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCTGCAGGTCCAAGTATTaGAAGATAATAATCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEHSECTELGLEMRRGWSCRSKY*KIIILL Trigger: CAGCAGGATTATTATCTTTCAATACTTGGACCTGCA...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTCTTTCTGTTCCTTCTaGTGCTTGTCCCAAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGSFCSF*CLSQSS Trigger: GGAACTTTGGGACAAGCAGCAGAAGGAACAGAAAGA...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGTGTCTTTCCAGCTTTaGGCTCTTGTTCCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCVSFQL*ALVPPF Trigger: GAAGGGAGGAACAAGAGCGCAAAGCTGGAAAGACAC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGGAGTCACGTTCATCTaGATCCTGTGTCTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCGVTFI*ILCLSS Trigger: GCTGGAAAGACACAGGATGCAGATGAACGTGACTCC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGATTATTCAGATCCTCATaGAGGCCATCCATGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGLFRSS*RPSMRN Trigger: GTTCCTCATGGATGGCCTGCATGAGGATCTGAATAA...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGATTCTATAGGAGGAGGTaGCATCTGGGTAGGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGFYRRR*HLGRKF Trigger: AAACTTCCTACCCAGATGCCACCTCCTCCTATAGAA...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTTGGATCAAGAAACTTaGCCCAGCCCAAAGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCLDQET*PSPKAV Trigger: GACTGCCTTTGGGCTGGGCCAAGTTTCTTGATCCAA...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGTGAATCCTGTTGGCTaGAGCCTGCAAACTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCVNPVG*SLQTGH Trigger: ATGACCAGTTTGCAGGCTCCAGCCAACAGGATTCAC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTTGTGAATCCTGTTaGCTGGAGCCTGCAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCSCESC*LEPANW Trigger: CCAGTTTGCAGGCTCCAGCCAACAGGATTCACAAGA...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTATTCTTCTGCTGTCTTaGAGATCTTCTGCGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCILLLS*RSSARC Trigger: ACAGCGCGCAGAAGATCTTCAAGACAGCAGAAGAAT...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGACCCGCCGTAGTGGTTTaGAACAGAAAACAAGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGPAVVV*NRKQVI Trigger: TATAACTTGTTTTCTGTTTCAAACCACTACGGCGGG...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGCTCAGCTTTTCATCTTaGTCAGTTACCAACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVLSFSS*SVTNSA Trigger: GGCACTGTTGGTAACTGATCAAGATGAAAAGCTGAG...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTCTCAGCTTTTCATCTTaGTCAGTTACCAACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSLSFSS*SVTNSA Trigger: GGCACTGTTGGTAACTGATCAAGATGAAAAGCTGAG...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTTCAGGTGGATACATATaGACTGTGTTTGTGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSSGGYI*TVFVGE Trigger: TTCCCCCACAAACACAGTTCATATGTATCCACCTGA...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTCAGGTGGATACATATaGACTGTGTTTGTGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVSGGYI*TVFVGE Trigger: TTCCCCCACAAACACAGTTCATATGTATCCACCTGA...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGAACCAATAACGTACTGTaGCAGGTCAAGATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGTNNVL*QVKIFQ Trigger: TTGGAAAATCTTGACCTGTCACAGTACGTTATTGGT...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTCTTTCTGTTCCTTCTaGTGCTTGTCCCAAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVSFCSF*CLSQSS Trigger: GGAACTTTGGGACAAGCAGCAGAAGGAACAGAAAGA...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTTATTCAGATCCTCATaGAGGCCATCCATGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCLFRSS*RPSMRN Trigger: GTTCCTCATGGATGGCCTGCATGAGGATCTGAATAA...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTTCTATAGGAGGAGGTaGCATCTGGGTAGGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCFYRRR*HLGRKF Trigger: AAACTTCCTACCCAGATGCCACCTCCTCCTATAGAA...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCCTTCATCTGTTAACATaGTGGTTGGAGAGGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: VILEHSECTELGLEMRRGLHLLT*WLEREI Trigger: TATTTCCCTCTCCAACCACCATGTTAACAGATGAAG...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGAGCTTTAGGGTAACATaGTGGCTTGTTTTCCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVSFRVT*WLVFPV Trigger: AACCGGGAAAACAAGCCACCATGTTACCCTAAAGCT...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGCCCGCCGTAGTGGTTTaGAACAGAAAACAAGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVPAVVV*NRKQVI Trigger: TATAACTTGTTTTCTGTTTCAAACCACTACGGCGGG...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTCTCTTGTCCATCCTTTaGTTTGTGCTGATTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCLLSIL*FVLILS Trigger: ACTGAGAATCAGCACAAAGCAAAGGATGGACAAGAG...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR GCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGAGCTCGGCAATGGCTaGAGTAAAATCTGTTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSELGNG*SKICCY Trigger: ATAACAACAGATTTTACTGCAGCCATTGCCGAGCTC...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCGCCGTTAATCCTTTaGGTTTTGGTTTTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCSPLIL*VLVLES Trigger: GGATTCCAAAACCAAAACCCAAAGGATTAACGGCGA...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTTCGCCGTTAATCCTTTaGGTTTTGGTTTTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: INSTGLNYMVLVAQPQCSSPLIL*VLVLES Trigger: GGATTCCAAAACCAAAACCCAAAGGATTAACGGCGA...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGCAGGTCCAAGTATTaGAAGATAATAATCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVCRSKY*KIIILL Trigger: CAGCAGGATTATTATCTTTCAATACTTGGACCTGCA...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTATAAGTAAAATCCAATaGGACAGACACCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCISKIQ*DRHLFS Trigger: GCTGAAGAGGTGTCTGTCTCATTGGATTTTACTTAT...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR TCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGACCAATAACGTACTGTaGCAGGTCAAGATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVTNNVL*QVKIFQ Trigger: TTGGAAAATCTTGACCTGTCACAGTACGTTATTGGT...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGCTTCATCTGTTAACATaGTGGTTGGAGAGGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: FDKQHWPELYGASSTAPVLHLLT*WLEREI Trigger: TATTTCCCTCTCCAACCACCATGTTAACAGATGAAG...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CCA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTGTGTATATAATTCTTaGTGCTGGTTTTCTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LINSTGLNYMVLVAQPQCCVYNS*CWFSQV Trigger: AACCTGAGAAAACCAGCACCAAGAATTATATACACA...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028841.14 |
||
| CDS GCA 90 bp | TGGAACAGGGCCACGATGATGGACTCGTTGAGCTGCTTGTGCTTCTaGCAGGCGTGCTCGGCCGCCTGCAGGTCATCCAGGTGCTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WNRATMMDSLSCLCF*QACSAACRSSRCSL Trigger: CAACGAGCACCTGGATGACCTGCAGGCGGCCGAGCACGCCTGGCAGAAGCACAAGCAGCTCAACGAGTCCATCATCGTGGCCCTGTTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS TCA 90 bp | TCTCGTCAAAGGTTCTCGCTGAGCCTTGCCTGCATTCAGCTCTCCTaGCACGGATGCAGGGGACACATCTGCTGGCCTCTTCTGCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRQRFSLSLACIQLS*HGCRGHICWPLLRL Trigger: GAGGCGCAGAAGAGGCCAGCAGATGTGTCCCCTGCATCCGTGTCAGGAGAGCTGAATGCAGGCAAGGCTCAGCGAGAACCTTTGACGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCATCTGGGTAGGAAGTTaGGAAGGAACTGGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LEHSECTELGLEMRRGWSIWVGS*EGTGSS Trigger: GGAAGAACCAGTTCCTTCCAAACTTCCTACCCAGAT...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCTCGTTGTTCTCTTCCTaGTGCCTCTTCCGATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEHSECTELGLEMRRGWSSLFSS*CLFRLS Trigger: TGACAATCGGAAGAGGCACAAGGAAGAGAACAACGA...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGATCATCCAGGTGCTCGTaGTTCTCTTCCTTGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGSSRCS*FSSLCL Trigger: GAGGCACAAGGAAGAGAACAACGAGCACCTGGATGA...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCTCTCTTGTCCATCCTTaGCTTTGTGCTGATTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LEHSECTELGLEMRRGWSSLVHP*LCADSQ Trigger: CTGAGAATCAGCACAAAGCAAAGGATGGACAAGAGA...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCACTCTTACTTTGTCTTaGTGTTCCTGTGGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEHSECTELGLEMRRGWSTLTLS*CSCGFL Trigger: CAGGAAGCCACAGGAACACAAAGACAAAGTAAGAGT...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCATGCTCACTCTTACTTaGTCTTTGTGTTCCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEHSECTELGLEMRRGWSMLTLT*SLCSCG Trigger: GCCACAGGAACACAAAGACAAAGTAAGAGTGAGCAT...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGAATTGGATCAAGAAACTaGGCCCAGCCCAAAGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGIGSRN*AQPKGS Trigger: ACTGCCTTTGGGCTGGGCCAAGTTTCTTGATCCAAT...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS GCA 90 bp | TCCATCCTTTGCTTTGTGCTGATTCTCAGTGGAGTCACGTTCATCTaGATCCTGTGTCTTTCCAGCTTTGCGCTCTTGTTCCTCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SILCFVLILSGVTFI*ILCLSSFALLFLPS Trigger: AGAAGGGAGGAACAAGAGCGCAAAGCTGGAAAGACACAGGATGCAGATGAACGTGACTCCACTGAGAATCAGCACAAAGCAAAGGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCATCTGGGTAGGAAGTTaGGAAGGAACTGGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VILEHSECTELGLEMRRGIWVGS*EGTGSS Trigger: GGAAGAACCAGTTCCTTCCAAACTTCCTACCCAGAT...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | CTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTGGAGCTCTCAGCTTTTCATCTaGATCAGTTACCAACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LEHSECTELGLEMRRGWSSQLFI*ISYQQC Trigger: GCACTGTTGGTAACTGATCAAGATGAAAAGCTGAGA...GCTCCAGCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGACTGTTAACATGGTGGTaGGAGAGGGAAATACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGLLTWW*EREILA Trigger: AGCCAGTATTTCCCTCTCCAACCACCATGTTAACAG...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCCTGTTAACATGGTGGTaGGAGAGGGAAATACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VILEHSECTELGLEMRRGLLTWW*EREILA Trigger: AGCCAGTATTTCCCTCTCCAACCACCATGTTAACAG...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCCAGCTTTGCGCTCTaGTTCCTCCCTTCTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LINSTGLNYMVLVAQPQCSSFAL*FLPSQL Trigger: AAGCTGAGAAGGGAGGAACAAGAGCGCAAAGCTGGA...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTTCCAGCTTTGCGCTCTaGTTCCTCCCTTCTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: INSTGLNYMVLVAQPQCSSSFAL*FLPSQL Trigger: AAGCTGAGAAGGGAGGAACAAGAGCGCAAAGCTGGA...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGATCGTTGTTCTCTTCCTaGTGCCTCTTCCGATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGSLFSS*CLFRLS Trigger: TGACAATCGGAAGAGGCACAAGGAAGAGAACAACGA...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTTCATCCAGGTGCTCGTaGTTCTCTTCCTTGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: INSTGLNYMVLVAQPQCSSSRCS*FSSLCL Trigger: GAGGCACAAGGAAGAGAACAACGAGCACCTGGATGA...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGCATTCTTCTGCTGTCTaGAAGATCTTCTGCGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FDKQHWPELYGASSTAPVHSSAV*KIFCAL Trigger: CAGCGCGCAGAAGATCTTCAAGACAGCAGAAGAATG...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTCATTCTTCTGCTGTCTaGAAGATCTTCTGCGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: INSTGLNYMVLVAQPQCSHSSAV*KIFCAL Trigger: CAGCGCGCAGAAGATCTTCAAGACAGCAGAAGAATG...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTTGTTCCTTCTGCTGCTaGTCCCAAAGTTCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: INSTGLNYMVLVAQPQCSCSFCC*SQSSFS Trigger: GGAGAAGGAACTTTGGGACAAGCAGCAGAAGGAACA...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGATCTCTTGTCCATCCTTaGCTTTGTGCTGATTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGSLVHP*LCADSQ Trigger: CTGAGAATCAGCACAAAGCAAAGGATGGACAAGAGA...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTATTGGATCAAGAAACTaGGCCCAGCCCAAAGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LINSTGLNYMVLVAQPQCIGSRN*AQPKGS Trigger: ACTGCCTTTGGGCTGGGCCAAGTTTCTTGATCCAAT...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCTCTCAGCTTTTCATCTaGATCAGTTACCAACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VILEHSECTELGLEMRRGSQLFI*ISYQQC Trigger: GCACTGTTGGTAACTGATCAAGATGAAAAGCTGAGA...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCAAGAAGGGCAGTTTCTaGATGAATACGAGCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VILEHSECTELGLEMRRGKKGSF*MNTSLF Trigger: GAAAAGGCTCGTATTCATCAAGAAACTGCCCTTCTT...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCACATATGAACTGTGTTaGTGGGGGAATGGTAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: VILEHSECTELGLEMRRGTYELC*WGNGSN Trigger: GTTACTACCATTCCCCCACAAACACAGTTCATATGT...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS TCA 90 bp | AGGCCCTTTCCTCATCACGATCTAGTCTGCATTCTTCTGCTGTCTTaGAGATCTTCTGCGCGCTGTGTATATAATTCTTGGTGCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPFPHHDLVCILLLS*RSSARCVYNSWCWF Trigger: AAACCAGCACCAAGAATTATATACACAGCGCGCAGAAGATCTTCAAGACAGCAGAAGAATGCAGACTAGATCGTGATGAGGAAAGGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028841.14 |
||
| CDS-3UTR CAA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGTCCTTTTCTTCAAGTaGTTTCCGAACTTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LINSTGLNYMVLVAQPQCVLFFK*FPNFSL Trigger: GAGGCTGAAGTTCGGAAACAACTTGAAGAAAAGGAC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTCTCGCCGTTAATCCTTaGGGTTTTGGTTTTGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: LINSTGLNYMVLVAQPQCLAVNP*GFGFGI Trigger: GATTCCAAAACCAAAACCCAAAGGATTAACGGCGAG...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTCTCGCCGTTAATCCTTaGGGTTTTGGTTTTGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: INSTGLNYMVLVAQPQCSLAVNP*GFGFGI Trigger: GATTCCAAAACCAAAACCCAAAGGATTAACGGCGAG...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGACTCTTACTTTGTCTTaGTGTTCCTGTGGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FDKQHWPELYGASSTAPVTLTLS*CSCGFL Trigger: CAGGAAGCCACAGGAACACAAAGACAAAGTAAGAGT...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTATGCTCACTCTTACTTaGTCTTTGTGTTCCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: INSTGLNYMVLVAQPQCSMLTLT*SLCSCG Trigger: GCCACAGGAACACAAAGACAAAGTAAGAGTGAGCAT...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | TTTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGGTAGAGTACATTTACTaGTGGATGCTAGCGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FDKQHWPELYGASSTAPVVEYIY*WMLAAK Trigger: CTTTGCCGCTAGCATCCACAAGTAAATGTACTCTAC...CACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGTAGAGTACATTTACTaGTGGATGCTAGCGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LINSTGLNYMVLVAQPQCVEYIY*WMLAAK Trigger: CTTTGCCGCTAGCATCCACAAGTAAATGTACTCTAC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGCCCGCCGTAGTGGTTaGAAACAGAAAACAAGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: INSTGLNYMVLVAQPQCSARRSG*KQKTSY Trigger: ATAACTTGTTTTCTGTTTCAAACCACTACGGCGGGC...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTGCCCGCCGTAGTGGTTaGAAACAGAAAACAAGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LINSTGLNYMVLVAQPQCARRSG*KQKTSY Trigger: ATAACTTGTTTTCTGTTTCAAACCACTACGGCGGGC...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
||
| CDS TCA 90 bp | AGGCCCTTTCCTCATCACGATCTAGTCTGCATTCTTCTGCTGTCTTaGAGATCTTCTGCGCGCTGTGTATATAACTTAGAAACGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RPFPHHDLVCILLLS*RSSARCVYNLETKR Trigger: TCTCTTCGTTTCTAAGTTATATACACAGCGCGCAGAAGATCTTCAAGACAGCAGAAGAATGCAGACTAGATCGTGATGAGGAAAGGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110416.3 |
||
| CDS-3UTR CAA 90 bp | AACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTGGACTTTGGGTTTTGGTTTaGGAATCCAGTAAATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSTGLNYMVLVAQPQCSGLWVLV*ESSKFS Trigger: GGAAAATTTACTGGATTCCAAAACCAAAACCCAAAG...TCCAGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CAA 90 bp | ATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTTCTAAGAAGGGCAGTTTCTaGATGAATACGAGCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: INSTGLNYMVLVAQPQCSKKGSF*MNTSLF Trigger: GAAAAGGCTCGTATTCATCAAGAAACTGCCCTTCTT...AGAACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CAA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTACATATGAACTGTGTTaGTGGGGGAATGGTAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: LINSTGLNYMVLVAQPQCTYELC*WGNGSN Trigger: GTTACTACCATTCCCCCACAAACACAGTTCATATGT...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS-3UTR CAA 90 bp | GTCATTCTAGAGCATTCAGAGTGCACTGAGCTGGGGCTAGAAATGAGAAGAGGCGAGAATTTACAAAACTaGGTATTCTTGGTGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: VILEHSECTELGLEMRRGENLQN*VFLVLV Trigger: AACCAGCACCAAGAATACCAAGTTTTGTAAATTCTC...GCCTCTTCTCATTTCTAGCCCCAGCTCAGTGCACTCTGAATGCTCTAGAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110416.3 |
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| CDS-3UTR CAA 90 bp | TTGATAAACAGCACTGGCCTGAATTATATGGTGCTAGTAGCACAGCCCCAGTGTCTTTGGGTTTTGGTTTaGGAATCCAGTAAATTTTCC | + |
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Preference number: 5 (lower is better) Translates to: LINSTGLNYMVLVAQPQCLWVLV*ESSKFS Trigger: GGAAAATTTACTGGATTCCAAAACCAAAACCCAAAG...ACACTGGGGCTGTGCTACTAGCACCATATAATTCAGGCCAGTGCTGTTTATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS GCA 72 bp | TCGAAGGTGCGCGACCTCCTGCGGCAGGTGAGGCACTaGACTGTGGACTTGAACTGGCCCTGGAACAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SKVRDLLRQVRH*TVDLNWPWNRA Trigger: GGCCCTGTTCCAGGGCCAGTTCAAGTCCACAGTGCAGTGCCTCACCTGCCGCAGGAGGTCGCGCACCTTCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS GCA 72 bp | GCCACGATGATGGACTCGTTGAGCTGCTTGTGCTTCTaGCAGGCGTGCTCGGCCGCCTGCAGGTCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATMMDSLSCLCF*QACSAACRSSR Trigger: CCTGGATGACCTGCAGGCGGCCGAGCACGCCTGGCAGAAGCACAAGCAGCTCAACGAGTCCATCATCGTGGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS CCA 72 bp | CAGGCGCTGGCTGAATTATGGGTGAGGCTTCAGCTCTaGGAGCCGCACCAGGTCCAGCTAGAGCTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QALAELWVRLQL*EPHQVQLELAG Trigger: CCCAGCCAGCTCTAGCTGGACCTGGTGCGGCTCCCAGAGCTGAAGCCTCACCCATAATTCAGCCAGCGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS TCA 72 bp | AACACTCTTTGTAGCAGGCGCTGGCTGAATTATGGGTaGGGCTTCAGCTCTGGGAGCCGCACCAGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: NTLCSRRWLNYG*GFSSGSRTRSS Trigger: GCTGGACCTGGTGCGGCTCCCAGAGCTGAAGCCTCACCCATAATTCAGCCAGCGCCTGCTACAAAGAGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS TCA 72 bp | AGGTTCTCGCTGAGCCTTGCCTGCATTCAGCTCTCCTaGCACGGATGCAGGGGACACATCTGCTGGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RFSLSLACIQLS*HGCRGHICWPL Trigger: AAGAGGCCAGCAGATGTGTCCCCTGCATCCGTGTCAGGAGAGCTGAATGCAGGCAAGGCTCAGCGAGAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS GCA 72 bp | GACACGGATGCAGGGGACACATCTGCTGGCCTCTTCTaGGCCTCTGACGTGGGACACCTTTTACCTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: DTDAGDTSAGLF*ASDVGHLLPST Trigger: TGTGGAAGGTAAAAGGTGTCCCACGTCAGAGGCGCAGAAGAGGCCAGCAGATGTGTCCCCTGCATCCGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS TCA 72 bp | CTTCTCCTCCTCCTGCAGGGCCTGAGTGATATCTGGTaGGGAGTAGGAGCGCTTCAGTTTCGATGGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LLLLLQGLSDIW*GVGALQFRWLP Trigger: AGGGAGCCATCGAAACTGAAGCGCTCCTACTCCTCACCAGATATCACTCAGGCCCTGCAGGAGGAGGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS TCA 72 bp | TCAACCTGTGGAACACTCTTTGTAGCAGGCGCTGGCTaGATTATGGGTGAGGCTTCAGCTCTGGGAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: STCGTLFVAGAG*IMGEASALGAA Trigger: TGCGGCTCCCAGAGCTGAAGCCTCACCCATAATTCAGCCAGCGCCTGCTACAAAGAGTGTTCCACAGGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS CAA 90 bp | CTTCAGCTCTGGGAGCCGCACCAGGTCCAGCTAGAGCTGGCTGGGTaGACAGTCTCAGCTTTTCATCTTGATCAGTTACCAACAGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LQLWEPHQVQLELAG*TVSAFHLDQLPTVP Trigger: AGGCACTGTTGGTAACTGATCAAGATGAAAAGCTGAGACTGTCAACCCAGCCAGCTCTAGCTGGACCTGGTGCGGCTCCCAGAGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS TCA 72 bp | TCTTTGTGTTCCTGTGGCTTCCTGGGCCCCGTCTGCTaGAAGCTCTCTGTCTTCCGTCTTGGTCTGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SLCSCGFLGPVC*KLSVFRLGLFA Trigger: AGCAAACAGACCAAGACGGAAGACAGAGAGCTTTCAGCAGACGGGGCCCAGGAAGCCACAGGAACACAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS CAA 72 bp | TGGGAGCCGCACCAGGTCCAGCTAGAGCTGGCTGGGTaGACAGTCTCAGCTTTTCATCTTGATCAGTTACCA | + |
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Preference number: 6 (lower is better) Translates to: WEPHQVQLELAG*TVSAFHLDQLP Trigger: TGGTAACTGATCAAGATGAAAAGCTGAGACTGTCAACCCAGCCAGCTCTAGCTGGACCTGGTGCGGCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS CCA 72 bp | TCACTCTTACTTTGTCTTTGTGTTCCTGTGGCTTCCTaGGCCCCGTCTGCTGAAAGCTCTCTGTCTTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: SLLLCLCVPVAS*APSAESSLSSV Trigger: GACGGAAGACAGAGAGCTTTCAGCAGACGGGGCCCAGGAAGCCACAGGAACACAAAGACAAAGTAAGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS CAA 72 bp | AGGTGCTCGTTGTTCTCTTCCTTGTGCCTCTTCCGATaGTCAGCCTTATTCAGATCCTCATGCAGGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: RCSLFSSLCLFR*SALFRSSCRPS Trigger: GGATGGCCTGCATGAGGATCTGAATAAGGCTGACAATCGGAAGAGGCACAAGGAAGAGAACAACGAGCACCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS GCA 72 bp | TGCAGGTCATCCAGGTGCTCGTTGTTCTCTTCCTTGTaGCTCTTCCGATTGTCAGCCTTATTCAGATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: CRSSRCSLFSSL*LFRLSALFRSS Trigger: TGAGGATCTGAATAAGGCTGACAATCGGAAGAGGCACAAGGAAGAGAACAACGAGCACCTGGATGACCTGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS GCA 72 bp | AGTCACGTTCATCTGCATCCTGTGTCTTTCCAGCTTTaGGCTCTTGTTCCTCCCTTCTCAGCTTCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SHVHLHPVSFQL*ALVPPFSASLS Trigger: AGAAAGAGAAGCTGAGAAGGGAGGAACAAGAGCGCAAAGCTGGAAAGACACAGGATGCAGATGAACGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS GCA 72 bp | TGCTTTGTGCTGATTCTCAGTGGAGTCACGTTCATCTaGATCCTGTGTCTTTCCAGCTTTGCGCTCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: CFVLILSGVTFI*ILCLSSFALLF Trigger: GAACAAGAGCGCAAAGCTGGAAAGACACAGGATGCAGATGAACGTGACTCCACTGAGAATCAGCACAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS GCA 72 bp | GGAAATCCACGGATGTTTGCAGCTTCTGCTTCCACCTaGCGTCATAGGAAAATCGTTTCAGGTGCACTAACA | + |
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Preference number: 6 (lower is better) Translates to: GNPRMFAASAST*RHRKIVSGALT Trigger: TGTTAGTGCACCTGAAACGATTTTCCTATGACGGCAGGTGGAAGCAGAAGCTGCAAACATCCGTGGATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS CCA 72 bp | CAACAGTGCCTTTTCATTTGTTTCTATAGGAGGAGGTaGCATCTGGGTAGGAAGTTTGGAAGGAACTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: QQCLFICFYRRR*HLGRKFGRNWF Trigger: GAACCAGTTCCTTCCAAACTTCCTACCCAGATGCCACCTCCTCCTATAGAAACAAATGAAAAGGCACTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS TCA 72 bp | CCTCATCACGATCTAGTCTGCATTCTTCTGCTGTCTTaGAGATCTTCTGCGCGCTGTGTATATAATTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PHHDLVCILLLS*RSSARCVYNSW Trigger: CCAAGAATTATATACACAGCGCGCAGAAGATCTTCAAGACAGCAGAAGAATGCAGACTAGATCGTGATGAGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028841.14 |
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| CDS TCA 72 bp | AGAGCTGGCTGGGTTGACAGTCTCAGCTTTTCATCTTaGTCAGTTACCAACAGTGCCTTTTCATTTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RAGWVDSLSFSS*SVTNSAFSFVS Trigger: AGAAACAAATGAAAAGGCACTGTTGGTAACTGATCAAGATGAAAAGCTGAGACTGTCAACCCAGCCAGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028841.14 ENSMUST00000110416.3 |
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| CDS TCA 72 bp | CCTCATCACGATCTAGTCTGCATTCTTCTGCTGTCTTaGAGATCTTCTGCGCGCTGTGTATATAACTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: PHHDLVCILLLS*RSSARCVYNLE Trigger: TTCTAAGTTATATACACAGCGCGCAGAAGATCTTCAAGACAGCAGAAGAATGCAGACTAGATCGTGATGAGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110416.3 |
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