Pregenerated sensors for USP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022710Ensembl transcript IDs: ENSMUST00000160326.8, ENSMUST00000160405.8, ENSMUST00000161046.9
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAGGCTCTGTATCCGCTTCATCACCTCTCGGAAATGCTCACCCTaGTGTATCCTTAGCAAAAATGGAATTCCAAACGTCCCAAACACC | + |
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Preference number: 1 (lower is better) Translates to: SRLCIRFITSRKCSP*CILSKNGIPNVPNT Trigger: GGTGTTTGGGACGTTTGGAATTCCATTTTTGCTAAGGATACACCAGGGTGAGCATTTCCGAGAGGTGATGAAGCGGATACAGAGCCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR CCA 90 bp | ATTGGTGTACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTaGGAAAGAAGTGTGGCTTGCTCCTTCTATCTGCACTCCAAACTA | + |
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Preference number: 1 (lower is better) Translates to: IGVHCCYRNKQKYWG*ERSVACSFYLHSKL Trigger: TAGTTTGGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTACACCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR TCA 90 bp | GAATTCCAAACGTCCCAAACACCTCTTTGTGGAAATGTGCCACTGTaGTTAGCATCTCGTTTTCCTTATCTATGTCTACCTGGTCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: EFQTSQTPLCGNVPL*LASRFPYLCLPGPK Trigger: CTTTGGACCAGGTAGACATAGATAAGGAAAACGAGATGCTAATCACAGTGGCACATTTCCACAAAGAGGTGTTTGGGACGTTTGGAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACGTCTGGGAGAGGCTCTaGACAAACTCGGCCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PGCLRQPGTSARDSPPRNVWERL*TNSARE Trigger: CTCCCTGGCCGAGTTTGTTCAGAGCCTCTCCCAGAC...GTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGTTTCACACCTTTCTCTaGCTCCTGCAGGCCATGCTC | + |
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Preference number: 2 (lower is better) Translates to: WPGCLRQPGTSARDSPPRFHTFL*LLQAML Trigger: GAGCATGGCCTGCAGGAGGCAGAGAAAGGTGTGAAA...CCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGCTTGTGGAAACCCCATaGTCTGGGAGAGGCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: WPGCLRQPGTSARDSPPRLVETP*SGRGSE Trigger: TTCAGAGCCTCTCCCAGACCATGGGGTTTCCACAAG...CCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCATACTCATCTTCATTaGTGTACTGGTGCCGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: PGCLRQPGTSARDSPPRNHTHLH*CTGAGP Trigger: TGGGCCGGCACCAGTACATCAATGAAGATGAGTATG...GTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR CCA 90 bp | CGCTCGTCCACTCTGTCCTCACAGAAGCCTAGAGTGACTTTTCACCTGCTCAGACAGGACCTGGGCAGGTaGCCAGGCTGCCTGCGCCAA | + |
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Preference number: 2 (lower is better) Translates to: RSSTLSSQKPRVTFHLLRQDLGR*PGCLRQ Trigger: TTGGCGCAGGCAGCCTGGCCACCTGCCCAGGTCCTG...TCTGAGCAGGTGAAAAGTCACTCTAGGCTTCTGTGAGGACAGAGTGGACGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGAGCAAATCCTCTTGCTaGAGACTTCGGGGAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: QGLLPGTHPLGTSSPMLRSKSSC*RLRGEC Trigger: GCACTCTCCCCGAAGTCTCCAGCAAGAGGATTTGCT...CCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGGAGCCCCAGGAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATTGAGACTTCGGGGAGAGTaGACGTGCACCAGAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: GEEPQEGPASDMVRRTLLRLRGE*TCTRGL Trigger: TAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCT...CAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTCCTGGGGCTCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACTGCTACAGTACTAGCTaGCAAAGAGAGACGGTTATT | + |
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Preference number: 2 (lower is better) Translates to: PGCLRQPGTSARDSPPRNCYSTS*QRETVI Trigger: AATAACCGTCTCTCTTTGTCAGCTAGTACTGTAGCA...GTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR GCA 90 bp | CACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACGCACTGTCAGACTTCGGGGAGAGTaGACGTGCACCAGAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: HVHQRSTAVKKGTHPRTVRLRGE*TCTRGL Trigger: TAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCT...GACAGTGCGTGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTGCGGATGGCTGCCTTaGATTGTGGTTACCATAAAA | + |
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Preference number: 2 (lower is better) Translates to: AACANQGLLPGTHPLGTSCGWLP*IVVTIK Trigger: TTTTATGGTAACCACAATGCAAGGCAGCCATCCGCA...AGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR CCA 90 bp | GACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATTGAGCAAATCCTCTTGCTaGAGACTTCGGGGAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: DSPPRNLFSHAADGCLALSKSSC*RLRGEC Trigger: GCACTCTCCCCGAAGTCTCCAGCAAGAGGATTTGCT...CAATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGGGAATAACTTTGGAATaGTGCCCTCTACACAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: QGLLPGTHPLGTSSPMLRGITLE*CPLHRC Trigger: GCACCTGTGTAGAGGGCACCATTCCAAAGTTATTCC...CCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAGCAAATCCTCTTGCTaGAGACTTCGGGGAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: SCWRLRGECTCTRGLRLLSKSSC*RLRGEC Trigger: GCACTCTCCCCGAAGTCTCCAGCAAGAGGATTTGCT...TAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR GCA 90 bp | CACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACGCACTGTCGAAAGAAGTGTGGCTTaGTCCTTCTATCTGCACTCC | + |
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Preference number: 2 (lower is better) Translates to: HVHQRSTAVKKGTHPRTVERSVA*SFYLHS Trigger: GGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTC...GACAGTGCGTGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR CAA 90 bp | GAGCCCCAGGAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATaGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACACA | + |
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Preference number: 2 (lower is better) Translates to: EPQEGPASDMVRRTL*TRAVFSGLPLQMHT Trigger: TGTGTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTCCTGGGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTATGCGGATGGCTGCCTTaGATTGTGGTTACCATAAAA | + |
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Preference number: 2 (lower is better) Translates to: SCWRLRGECTCTRGLRLLCGWLP*IVVTIK Trigger: TTTTATGGTAACCACAATGCAAGGCAGCCATCCGCA...TAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR CCA 90 bp | CACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACGCACTGTCACTGAAGGAAGAAATTaGACGAGCCTACTCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: HVHQRSTAVKKGTHPRTVTEGRN*TSLLIS Trigger: GCTGATGAGTAGGCTCGTCCAATTTCTTCCTTCAGT...GACAGTGCGTGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR CAA 90 bp | ACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTaGCATTGTGGTTACCATAAAAGAACTCTCATTGGCATCCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: THPLGTSSPMLRMAA*HCGYHKRTLIGIQA Trigger: AGCTTGGATGCCAATGAGAGTTCTTTTATGGTAACCACAATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTCTGTCCCTGTTTTCTCTGGTTTaGCTTTACAGATGCACACAG | + |
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Preference number: 2 (lower is better) Translates to: EHAPLLKGSLLCRSSTLSLFSLV*LYRCTQ Trigger: CTGTGTGCATCTGTAAAGGCAAACCAGAGAAAACAG...GGACAGAGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR-3UTR CCA 90 bp | CACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACGCACTGTCCAGTCGTTTTCCTTGTaGAAGAACAAGTGGCTGATT | + |
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Preference number: 2 (lower is better) Translates to: HVHQRSTAVKKGTHPRTVQSFSL*KNKWLI Trigger: AATCAGCCACTTGTTCTTCCACAAGGAAAACGACTG...GACAGTGCGTGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTCTGTATCCGCTTCATCACCTCTCGGAAATGCTCACCCTGGTGTATCCTTGCGGATGGCTGCCTTaGATTGTGGTTACCATAAAA | + |
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Preference number: 2 (lower is better) Translates to: QALYPLHHLSEMLTLVYPCGWLP*IVVTIK Trigger: TTTTATGGTAACCACAATGCAAGGCAGCCATCCGCA...AGGATACACCAGGGTGAGCATTTCCGAGAGGTGATGAAGCGGATACAGAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTCTGTCCGTTTGCCTTTACAGATaGACACAGATCACTGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: EHAPLLKGSLLCRSSTLSVCLYR*TQITES Trigger: ACTTTCAGTGATCTGTGTGCATCTGTAAAGGCAAAC...GGACAGAGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR-3UTR CCA 90 bp | CACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACGCACTGTCAATATACAGGAGAATTaGTGTACACTGCTGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: HVHQRSTAVKKGTHPRTVNIQEN*CTLLLQ Trigger: CTGTAGCAGCAGTGTACACCAATTCTCCTGTATATT...GACAGTGCGTGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR CAA 90 bp | TTTTACAAAGTCAACAGCGTACTAACCATTAGCGAGCATGCGCCCTaGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTCTGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: FYKVNSVLTISEHAP*LKGSLLCRSSTLSS Trigger: TGAGGACAGAGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTCGCTAATGGTTAGTACGCTGTTGACTTTGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTCTGTATCCGCTTCATCACCTCTCGGAAATGCTCACCCTGGTGTATCCTTATAACCTTGAGACTTaGAAAACTGCAGCAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: QALYPLHHLSEMLTLVYPYNLET*KTAAAW Trigger: CCATGCTGCTGCAGTTTTTCAAGTCTCAAGGTTATA...AGGATACACCAGGGTGAGCATTTCCGAGAGGTGATGAAGCGGATACAGAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTCTGTATCCGCTTCATCACCTCTCGGAAATGCTCACCCTGGTGTATCCTGGTAGTCTACGTCTTTaGACTGAATATAGGACACCA | + |
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Preference number: 2 (lower is better) Translates to: QALYPLHHLSEMLTLVYPGSLRL*TEYRTP Trigger: TGGTGTCCTATATTCAGTGCAAAGACGTAGACTACC...AGGATACACCAGGGTGAGCATTTCCGAGAGGTGATGAAGCGGATACAGAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR GCA 90 bp | TATCTGCACTTGCATGTAGAGATGGGCTTCCTGCCGCTCCTTCCGCTTCTGAGCACATATAGGCATTTGTaGAGTGTCGAACAGACAGAT | + |
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Preference number: 2 (lower is better) Translates to: YLHLHVEMGFLPLLPLLSTYRHL*SVEQTD Trigger: ATCTGTCTGTTCGACACTGCACAAATGCCTATATGT...GCTCAGAAGCGGAAGGAGCGGCAGGAAGCCCATCTCTACATGCAAGTGCAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCAACAAAAAGGGAAACAAGGAGAAGACTCAAATAAAGCTACGCAGAGTGTCCGCTCCTTCCGCTTCTaGGCCTCGATCCTTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LQQKGKQGEDSNKATQSVRSFRF*ASILFS Trigger: AGAGAAAAGGATCGAGGCTCAGAAGCGGAAGGAGCG...GACACTCTGCGTAGCTTTATTTGAGTCTTCTCCTTGTTTCCCTTTTTGTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAGCGAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTGTTTGCCTTTACAGATaGACACAGATCACTGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: ISEHAPLLKGSLLCRSSTVCLYR*TQITES Trigger: ACTTTCAGTGATCTGTGTGCATCTGTAAAGGCAAAC...AGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTCGCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCTGTATCCGCTTCATCACCTCTCGGAAATGCTCACCCTGGTGTATCCTAATATACAGGAGAATTaGTGTACACTGCTGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: QALYPLHHLSEMLTLVYPNIQEN*CTLLLQ Trigger: CTGTAGCAGCAGTGTACACCAATTCTCCTGTATATT...AGGATACACCAGGGTGAGCATTTCCGAGAGGTGATGAAGCGGATACAGAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTACTGGGGGTGGGAAAGAAGTGTGGCTTGCTCCTTCTATCTGCACTCCAAATGCTACAGTACTAGCTaGCAAAGAGAGACGGTTATT | + |
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Preference number: 2 (lower is better) Translates to: KYWGWERSVACSFYLHSKCYSTS*QRETVI Trigger: AATAACCGTCTCTCTTTGTCAGCTAGTACTGTAGCA...TTTGGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTACTGGGGGTGGGAAAGAAGTGTGGCTTGCTCCTTCTATCTGCACTCCAAATCCATGGGGAGCATCTaGCTGTACAAAAACTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: KYWGWERSVACSFYLHSKSMGSI*LYKNFK Trigger: TTTGAAGTTTTTGTACAGGCAGATGCTCCCCATGGA...TTTGGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAATTGGTGTACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTGGTATAGGACACCATTTTaGCTCGGAATAACTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: RRIGVHCCYRNKQKYWGWYRTPF*LGITLE Trigger: TTCCAAAGTTATTCCGAGGCAAAATGGTGTCCTATA...CCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTACACCAATTCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCAACAAAAAGGGAAACAAGGAGAAGACTCAAATAAAGCTACGCAGAGTGTCCGAACTTACACCATTTaGCATCCCCTTTGGGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: LQQKGKQGEDSNKATQSVRTYTI*HPLWGL Trigger: TAAACCCCAAAGGGGATGGCAAATGGTGTAAGTTCG...GACACTCTGCGTAGCTTTATTTGAGTCTTCTCCTTGTTTCCCTTTTTGTTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR CAA 90 bp | TGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGACCTGGCCCCAGTCGTTTTCCTaGTGGAAGAACAAGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: WTSLLISLTSCRAGGRTWPQSFS*WKNKWL Trigger: CAGCCACTTGTTCTTCCACAAGGAAAACGACTGGGG...CCAGGTCCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR CAA 90 bp | TCCAAGTCGGCCAGGGTCACTCGCACTCACCCAATAGAAAACGGCCTCCTCCCACTGCGGATGGCTGCCTaGCATTGTGGTTACCATAAA | + |
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Preference number: 3 (lower is better) Translates to: SKSARVTRTHPIENGLLPLRMAA*HCGYHK Trigger: TTTATGGTAACCACAATGCAAGGCAGCCATCCGCAG...TGGGAGGAGGCCGTTTTCTATTGGGTGAGTGCGAGTGACCCTGGCCGACTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGGAGCCCCAGGAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATTGCTGCGGATGGCTGCCTaGCATTGTGGTTACCATAAA | + |
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Preference number: 3 (lower is better) Translates to: GEEPQEGPASDMVRRTLLLRMAA*HCGYHK Trigger: TTTATGGTAACCACAATGCAAGGCAGCCATCCGCAG...CAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTCCTGGGGCTCCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| 3UTR-3UTR CAA 90 bp | CCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTCTGTCCTCACAGAAGAGCCAGTATGCTTCTTaGAGTCCCACGCAACTCCAT | + |
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Preference number: 3 (lower is better) Translates to: PLLKGSLLCRSSTLSSQKSQYAS*SPTQLH Trigger: ATGGAGTTGCGTGGGACTCAAAGAAGCATACTGGCT...CTTCTGTGAGGACAGAGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAGCGAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTGTCCCAAACACCTCTTaGTGGAAATGTGCCACTGTG | + |
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Preference number: 3 (lower is better) Translates to: ISEHAPLLKGSLLCRSSTVPNTS*WKCATV Trigger: CACAGTGGCACATTTCCACAAAGAGGTGTTTGGGAC...AGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTCGCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| 3UTR-3UTR CAA 90 bp | GAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTCTGTCCTCCTCCCAGGGCAAATaGTACAGGTTTCATTCATTA | + |
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Preference number: 3 (lower is better) Translates to: EHAPLLKGSLLCRSSTLSSSQGK*YRFHSL Trigger: TAATGAATGAAACCTGTACAATTTGCCCTGGGAGGA...GGACAGAGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTATATTCATGTAACACGTaGCTCCCTGATTCTTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SCWRLRGECTCTRGLRLLYSCNT*LPDSLS Trigger: GCTTAAAGAATCAGGGAGCAACGTGTTACATGAATA...TAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR GCA 72 bp | AAACAGAAGTACTGGGGGTGGGAAAGAAGTGTGGCTTaGTCCTTCTATCTGCACTCCAAACTAGACACGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KQKYWGWERSVA*SFYLHSKLDTQ Trigger: CTGCGTGTCTAGTTTGGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTTCTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
||
| 3UTR CCA 72 bp | CACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTaGGAAAGAAGTGTGGCTTGCTCCTTCTATCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HCCYRNKQKYWG*ERSVACSFYLH Trigger: GTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTCTGTCCGTAAAGTTTCTTAGGTaGTCTTGGCTTGAAGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: EHAPLLKGSLLCRSSTLSVKFLR*SWLEEL Trigger: CAATTCTTCAAGCCAAGACAACCTAAGAAACTTTAC...GGACAGAGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR TCA 72 bp | GTCGCTCGTCCACTCTGTCCTCACAGAAGCCTAGAGTaGCTTTTCACCTGCTCAGATCATTACATTTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VARPLCPHRSLE*LFTCSDHYICQ Trigger: TTGGCAAATGTAATGATCTGAGCAGGTGAAAAGTCACTCTAGGCTTCTGTGAGGACAGAGTGGACGAGCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGCTCTGTATCCGCTTCATCACCTCTCGGAAATGCTCACCCTGGTGTATCCTTAGGTTGTCTTGGCTaGAAGAATTGTAGAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: AGSVSASSPLGNAHPGVSLGCLG*KNCRRS Trigger: AGATCTTCTACAATTCTTCAAGCCAAGACAACCTAA...GGATACACCAGGGTGAGCATTTCCGAGAGGTGATGAAGCGGATACAGAGCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR CCA 72 bp | GCCATGAAATTAGAGAATCCCCAGTCGTTTTCCTTGTaGAAGAACAAGTGGCTGATTCGCCGGCTGAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: AMKLENPQSFSL*KNKWLIRRLND Trigger: ATCATTCAGCCGGCGAATCAGCCACTTGTTCTTCCACAAGGAAAACGACTGGGGATTCTCTAATTTCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAAATGGAATTCCAAACGTCCCAAACACCTCTTTGTGGAAATGTGCCACTGTCGAACTTACACCATTaGCCATCCCCTTTGGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: AKMEFQTSQTPLCGNVPLSNLHH*PSPLGF Trigger: AAACCCCAAAGGGGATGGCAAATGGTGTAAGTTCGA...CAGTGGCACATTTCCACAAAGAGGTGTTTGGGACGTTTGGAATTCCATTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAAATGGAATTCCAAACGTCCCAAACACCTCTTTGTGGAAATGTGCCACTGGCCGTCCCTATAACCTaGAGACTTGAAAAACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AKMEFQTSQTPLCGNVPLAVPIT*RLEKLQ Trigger: CTGCAGTTTTTCAAGTCTCAAGGTTATAGGGACGGC...CAGTGGCACATTTCCACAAAGAGGTGTTTGGGACGTTTGGAATTCCATTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR CCA 72 bp | TGTATCCGCTTCATCACCTCTCGGAAATGCTCACCCTaGTGTATCCTTAGCAAAAATGGAATTCCAAACGTC | + |
|
Preference number: 3 (lower is better) Translates to: CIRFITSRKCSP*CILSKNGIPNV Trigger: GACGTTTGGAATTCCATTTTTGCTAAGGATACACCAGGGTGAGCATTTCCGAGAGGTGATGAAGCGGATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR-3UTR CAA 90 bp | TACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTGGGAAAGAAGTGTGGAACTCAAACCTGTCATaGATCTTGATGTTTTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: YTAATETNRSTGGGKEVWNSNLS*ILMFWS Trigger: GGACCAAAACATCAAGATCAATGACAGGTTTGAGTT...CCACACTTCTTTCCCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR TCA 72 bp | ACGTCCCAAACACCTCTTTGTGGAAATGTGCCACTGTaGTTAGCATCTCGTTTTCCTTATCTATGTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: TSQTPLCGNVPL*LASRFPYLCLP Trigger: AGGTAGACATAGATAAGGAAAACGAGATGCTAATCACAGTGGCACATTTCCACAAAGAGGTGTTTGGGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR GCA 72 bp | TTTTTACATTCTTCTAACAGGTCCCGGACACAGCCATaGTTGTCTGGGTATAGTGTTATTTCCTCTTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: FLHSSNRSRTQP*LSGYSVISSSL Trigger: TAGGGAAGAGGAAATAACACTATACCCAGACAAGCATGGCTGTGTCCGGGACCTGTTAGAAGAATGTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR GCA 72 bp | AATCTTCTCTCCTATCAGAACGGTAGTCTACGTCTTTaGACTGAATATAGGACACCATTTTGCCTCGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: NLLSYQNGSLRL*TEYRTPFCLGI Trigger: TATTCCGAGGCAAAATGGTGTCCTATATTCAGTGCAAAGACGTAGACTACCGTTCTGATAGGAGAGAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR CCA 72 bp | AAAAATGGAATTCCAAACGTCCCAAACACCTCTTTGTaGAAATGTGCCACTGTGATTAGCATCTCGTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KNGIPNVPNTSL*KCATVISISFS Trigger: GGAAAACGAGATGCTAATCACAGTGGCACATTTCCACAAAGAGGTGTTTGGGACGTTTGGAATTCCATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAACAAAAAGGGAAACAAGGAGAAGACTCAAATAAAGCTACGCAGAGTGTCACTTCAAAGGTGACTTaGTCATCATCGATGAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LQQKGKQGEDSNKATQSVTSKVT*SSSMNP Trigger: AGGATTCATCGATGATGACAAAGTCACCTTTGAAGT...GACACTCTGCGTAGCTTTATTTGAGTCTTCTCCTTGTTTCCCTTTTTGTTGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR CCA 72 bp | GTGATTAGCATCTCGTTTTCCTTATCTATGTCTACCTaGTCCAAAGGTATTTCCTCTATTCTAAAAGTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: VISISFSLSMST*SKGISSILKVR Trigger: TCGGACTTTTAGAATAGAGGAAATACCTTTGGACCAGGTAGACATAGATAAGGAAAACGAGATGCTAATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGGTCTGGGAGAGGCTCTaGACAAACTCGGCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WPGCLRQPGTSARDSPPRVWERL*TNSARE Trigger: CTCCCTGGCCGAGTTTGTTCAGAGCCTCTCCCAGAC...CCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGCCTCGGAGCGCCAACTaGTGTCATCCTCCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPGCLRQPGTSARDSPPRPRSAN*CHPPCP Trigger: AGGACATGGAGGATGACACCAGTTGGCGCTCCGAGG...CCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCCTTCAGCACTGCTTGTaGGTGGCAGGACCACGACGT | + |
|
Preference number: 4 (lower is better) Translates to: QAACANQGLLPGTHPLGTLQHCL*VAGPRR Trigger: ACGTCGTGGTCCTGCCACGCACAAGCAGTGCTGAAG...GGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGGGCAGGACCACGACGTaGAGTCAGATTCAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: WPGCLRQPGTSARDSPPRGRTTT*SQIQHC Trigger: GCAATGCTGAATCTGACTCCACGTCGTGGTCCTGCC...CCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTGGCTCGCTCAGCTGCTaGTCGCCCGCTTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLETSGRVHVHQRSTAVGSLSC*SPAFCC Trigger: GCAGCAGAAAGCGGGCGAGCAGCAGCTGAGCGAGCC...AACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | GACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATTGGGCTCGCTCAGCTGCTaGTCGCCCGCTTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSPPRNLFSHAADGCLALGSLSC*SPAFCC Trigger: GCAGCAGAAAGCGGGCGAGCAGCAGCTGAGCGAGCC...CAATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTGCCAGTATGCTTCTTTaGGTCCCACGCAACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AACANQGLLPGTHPLGTSASMLL*VPRNSM Trigger: CATGGAGTTGCGTGGGACTCAAAGAAGCATACTGGC...AGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGCGCTCCTTCCGCTTCTaGGCCTCGATCCTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGLLPGTHPLGTSSPMLRRSFRF*ASILFS Trigger: AGAGAAAAGGATCGAGGCTCAGAAGCGGAAGGAGCG...CCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | CAGGACCTGGGCAGGTGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGGAAATGTGCCACTGTaGTTAGCATCTCGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QDLGRWPGCLRQPGTSARGNVPL*LASRFP Trigger: AGGAAAACGAGATGCTAATCACAGTGGCACATTTCC...CCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCACCTGCCCAGGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CAGGACCTGGGCAGGTGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGATCCTGGATAAATCCTaGTCTGTCACACATAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: QDLGRWPGCLRQPGTSARILDKS*SVTHNR Trigger: CCGGTTATGTGTGACAGAGCAGGATTTATCCAGGAT...CCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCACCTGCCCAGGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | GGGACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATCCTCGGAGCGCCAACTaGTGTCATCCTCCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTHPLGTSSPMLRMAALHPRSAN*CHPPCP Trigger: AGGACATGGAGGATGACACCAGTTGGCGCTCCGAGG...ATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | GCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTCTTCTTTGGGGCTTTGTTaGAGTGGTCAAGCCCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ACANQGLLPGTHPLGTSSSLGLC*SGQALA Trigger: GGCTAGGGCTTGACCACTTCAACAAAGCCCCAAAGA...AGAAGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTCTTCAGCACTGCTTGTaGGTGGCAGGACCACGACGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLETSGRVHVHQRSTAVLQHCL*VAGPRR Trigger: ACGTCGTGGTCCTGCCACGCACAAGCAGTGCTGAAG...AACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CAGGACCTGGGCAGGTGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGTCCATGGGGAGCATCTaGCTGTACAAAAACTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QDLGRWPGCLRQPGTSARSMGSI*LYKNFK Trigger: TTTGAAGTTTTTGTACAGGCAGATGCTCCCCATGGA...CCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCACCTGCCCAGGTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | TGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGACCTGGTTTCACACCTTTCTCTaGCTCCTGCAGGCCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WTSLLISLTSCRAGGRTWFHTFL*LLQAML Trigger: GAGCATGGCCTGCAGGAGGCAGAGAAAGGTGTGAAA...CCAGGTCCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CAGGACCTGGGCAGGTGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGACAAAACTGGTCCTCTaGAACTATCTGCACTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDLGRWPGCLRQPGTSARTKLVL*NYLHLH Trigger: ATGCAAGTGCAGATAGTTGCAGAGGACCAGTTTTGT...CCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCACCTGCCCAGGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | GGGACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATGCTTTCTGCTGCTGCTaGTGCTGCTGTTGGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTHPLGTSSPMLRMAALHAFCCC*CCCWWF Trigger: GAACCACCAACAGCAGCAGCAGCAGCAGCAGAAAGC...ATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTCCTCGGAGCGCCAACTaGTGTCATCCTCCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLETSGRVHVHQRSTAVPRSAN*CHPPCP Trigger: AGGACATGGAGGATGACACCAGTTGGCGCTCCGAGG...AACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAGCACTGCTTGTGCGTaGCAGGACCACGACGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCWRLRGECTCTRGLRLLSTACA*QDHDVE Trigger: CTCCACGTCGTGGTCCTGCCACGCACAAGCAGTGCT...TAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCGGAATAACTTTGGAATaGTGCCCTCTACACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAACANQGLLPGTHPLGTGITLE*CPLHRC Trigger: GCACCTGTGTAGAGGGCACCATTCCAAAGTTATTCC...GGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGGTGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCAAATCCAGGGTCATTaGGGATCGTTTTGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WAGGQAACANQGLLPGTHQIQGH*GSFCHR Trigger: TCTGTGACAAAACGATCCCCAATGACCCTGGATTTG...GTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCACCTGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCGAATATCATGGTCGGTaGCAGCTTGTAACACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAACANQGLLPGTHPLGTEYHGR*QLVTLH Trigger: GTGAAGTGTTACAAGCTGTCACCGACCATGATATTC...GGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | TGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGACCTGGCATACTCATCTTCATTaGTGTACTGGTGCCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WTSLLISLTSCRAGGRTWHTHLH*CTGAGP Trigger: TGGGCCGGCACCAGTACATCAATGAAGATGAGTATG...CCAGGTCCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGAGCCCCAGGAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATTGTGTCCTCTTCTGCGTTaGTGTGCCCATCACTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEEPQEGPASDMVRRTLLCPLLR*CAHHSG Trigger: CCCTGAGTGATGGGCACAGCAACGCAGAAGAGGACA...CAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTCCTGGGGCTCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | GACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATTGGGCAGGACCACGACGTaGAGTCAGATTCAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSPPRNLFSHAADGCLALGRTTT*SQIQHC Trigger: GCAATGCTGAATCTGACTCCACGTCGTGGTCCTGCC...CAATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGCAGTCGTTTTCCTTGTaGAAGAACAAGTGGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: WPGCLRQPGTSARDSPPRQSFSL*KNKWLI Trigger: AATCAGCCACTTGTTCTTCCACAAGGAAAACGACTG...CCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAGCCCCAGGAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATTGGGGGCTTTGTTGAAGTaGTCAAGCCCTAGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEEPQEGPASDMVRRTLLGALLK*SSPSQG Trigger: GCCTTGGCTAGGGCTTGACCACTTCAACAAAGCCCC...CAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTCCTGGGGCTCCTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTGAATATCATGGTCGGTaGCAGCTTGTAACACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AACANQGLLPGTHPLGTSEYHGR*QLVTLH Trigger: GTGAAGTGTTACAAGCTGTCACCGACCATGATATTC...AGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTTCTTTGGGGCTTTGTTaGAGTGGTCAAGCCCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLETSGRVHVHQRSTAVSLGLC*SGQALA Trigger: GGCTAGGGCTTGACCACTTCAACAAAGCCCCAAAGA...AACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | GACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATTGCTCCATGTCCTCTTCTaGGTTGCTGTGCCCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: DSPPRNLFSHAADGCLALLHVLF*VAVPIT Trigger: AGTGATGGGCACAGCAACGCAGAAGAGGACATGGAG...CAATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGAGCCCCAGGAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATTGCTCCATGTCCTCTTCTaGGTTGCTGTGCCCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: GEEPQEGPASDMVRRTLLLHVLF*VAVPIT Trigger: AGTGATGGGCACAGCAACGCAGAAGAGGACATGGAG...CAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTCCTGGGGCTCCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGCGAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTAGCACTGCTTGTGCGTaGCAGGACCACGACGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISEHAPLLKGSLLCRSSTSTACA*QDHDVE Trigger: CTCCACGTCGTGGTCCTGCCACGCACAAGCAGTGCT...AGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTCGCTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCACAGCCTTTCGTAACTaGTTTGTGAAAAACAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAACANQGLLPGTHPLGTTAFRN*FVKNKV Trigger: GACCTTGTTTTTCACAAATCAGTTACGAAAGGCTGT...GGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | TGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGTTAGCTTTGATTCCCTaGTGTACACTAACATATAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPGCLRQPGTSARDSPPRLALIP*CTLTYR Trigger: CCTATATGTTAGTGTACATCAGGGAATCAAAGCTAA...CCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTAGTTCTTCAGAACCTTaGACACAGTGTACCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: AACANQGLLPGTHPLGTSSSSEP*TQCTSL Trigger: AAGTGAGGTACACTGTGTTCAAGGTTCTGAAGAACT...AGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACATGTCCTCTTCTGCGTTaGTGTGCCCATCACTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGRVHVHQRSTAVKKGTCPLLR*CAHHSG Trigger: CCCTGAGTGATGGGCACAGCAACGCAGAAGAGGACA...TGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACGCACTGTCTTTCACACCTTTCTCTaGCTCCTGCAGGCCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVHQRSTAVKKGTHPRTVFHTFL*LLQAML Trigger: GAGCATGGCCTGCAGGAGGCAGAGAAAGGTGTGAAA...GACAGTGCGTGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | TGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGACCTGGCGAACTTACACCATTTaGCATCCCCTTTGGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WTSLLISLTSCRAGGRTWRTYTI*HPLWGL Trigger: TAAACCCCAAAGGGGATGGCAAATGGTGTAAGTTCG...CCAGGTCCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | GACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATTGTCCCGGACACAGCCATaGTTGTCTGGGTATAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DSPPRNLFSHAADGCLALSRTQP*LSGYSV Trigger: AACACTATACCCAGACAAGCATGGCTGTGTCCGGGA...CAATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | GGGACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATGGAATAACTTTGGAATaGTGCCCTCTACACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTHPLGTSSPMLRMAALHGITLE*CPLHRC Trigger: GCACCTGTGTAGAGGGCACCATTCCAAAGTTATTCC...ATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | AGAAATTGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGCTTGTGGAAACCCCATaGTCTGGGAGAGGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNWTSLLISLTSCRAGGRLVETP*SGRGSE Trigger: TTCAGAGCCTCTCCCAGACCATGGGGTTTCCACAAG...CCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCAATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGGTGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACTTATCTATGTCTACCTaGTCCAAAGGTATTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WAGGQAACANQGLLPGTHLSMST*SKGISS Trigger: AGAGGAAATACCTTTGGACCAGGTAGACATAGATAA...GTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCACCTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTGGCCATAATCGAATCTaGTCTTGTGGAAACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLETSGRVHVHQRSTAVGHNRI*SCGNPM Trigger: CATGGGGTTTCCACAAGATCAGATTCGATTATGGCC...AACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | GCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTCTTATAACCTTGAGACTTaGAAAACTGCAGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ACANQGLLPGTHPLGTSSYNLET*KTAAAW Trigger: CCATGCTGCTGCAGTTTTTCAAGTCTCAAGGTTATA...AGAAGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | TCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTACATACTCATCTTCATTaGTGTACTGGTGCCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCWRLRGECTCTRGLRLLHTHLH*CTGAGP Trigger: TGGGCCGGCACCAGTACATCAATGAAGATGAGTATG...TAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTTATTATCTTCAGCACTaGTTGTGCGTGGCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLETSGRVHVHQRSTAVYYLQH*LCVAGP Trigger: TGGTCCTGCCACGCACAAGCAGTGCTGAAGATAATA...AACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTGTGCAACTGTCTTTaGAACCTGAAAATAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGCLRQPGTSARDSPPRNLCNCL*NLKIVH Trigger: ATGAACTATTTTCAGGTTGCAAAGACAGTTGCACAG...GTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGTCATTGGGGATCGTTTTGTCACAGAAGATGACGTCGACCCGGTGGTAGCTTTCTGCTGCTGCTaGTGCTGCTGTTGGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRVIGDRFVTEDDVDPVVAFCCC*CCCWWF Trigger: GAACCACCAACAGCAGCAGCAGCAGCAGCAGAAAGC...TACCACCGGGTCGACGTCATCTTCTGTGACAAAACGATCCCCAATGACCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
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| CDS-3UTR CCA 90 bp | TGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGACCTGGCAGTCGTTTTCCTTGTaGAAGAACAAGTGGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: WTSLLISLTSCRAGGRTWQSFSL*KNKWLI Trigger: AATCAGCCACTTGTTCTTCCACAAGGAAAACGACTG...CCAGGTCCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACTTGTGGAAACCCCATaGTCTGGGAGAGGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSGRVHVHQRSTAVKKGTLVETP*SGRGSE Trigger: TTCAGAGCCTCTCCCAGACCATGGGGTTTCCACAAG...TGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTATCAAACTCCTTCTCCTaGATGTCCAGCAGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCWRLRGECTCTRGLRLLSNSFS*MSSRLC Trigger: ACAGAGCCTGCTGGACATCCAGGAGAAGGAGTTTGA...TAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CCA 90 bp | AGAAATTGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGTCAAACTCCTTCTCCTaGATGTCCAGCAGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RNWTSLLISLTSCRAGGRSNSFS*MSSRLC Trigger: ACAGAGCCTGCTGGACATCCAGGAGAAGGAGTTTGA...CCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCAATTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR TCA 90 bp | CGCTCGTCCACTCTGTCCTCACAGAAGCCTAGAGTGACTTTTCACCTGCTCAGAGCCAGTATGCTTCTTTaGGTCCCACGCAACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSSTLSSQKPRVTFHLLRASMLL*VPRNSM Trigger: CATGGAGTTGCGTGGGACTCAAAGAAGCATACTGGC...TCTGAGCAGGTGAAAAGTCACTCTAGGCTTCTGTGAGGACAGAGTGGACGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGTTCGTAACTGATTTGTaGAAAACAAGGTCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGLLPGTHPLGTSSPMLRFVTDL*KTRSAA Trigger: TGCTGCAGACCTTGTTTTTCACAAATCAGTTACGAA...CCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGAATTGGTGTACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTGGGTCTGGGAGAGGCTCTaGACAAACTCGGCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRIGVHCCYRNKQKYWGWVWERL*TNSARE Trigger: CTCCCTGGCCGAGTTTGTTCAGAGCCTCTCCCAGAC...CCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTACACCAATTCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR TCA 90 bp | GAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTCTGTCCGGCCATAATCGAATCTaGTCTTGTGGAAACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EHAPLLKGSLLCRSSTLSGHNRI*SCGNPM Trigger: CATGGGGTTTCCACAAGATCAGATTCGATTATGGCC...GGACAGAGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR TCA 90 bp | TGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGACCTGGTCCTATTTGATAATGTaGCCACAAATCCAGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WTSLLISLTSCRAGGRTWSYLIM*PQIQGH Trigger: ATGACCCTGGATTTGTGGTCACATTATCAAATAGGA...CCAGGTCCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTTATCTATGTCTACCTaGTCCAAAGGTATTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AACANQGLLPGTHPLGTSLSMST*SKGISS Trigger: AGAGGAAATACCTTTGGACCAGGTAGACATAGATAA...AGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | TCGTCCACTCTGTCCTCACAGAAGCCTAGAGTGACTTTTCACCTGCTCAGATCAAGCACTGCTTGTGCGTaGCAGGACCACGACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTLSSQKPRVTFHLLRSSTACA*QDHDSV Trigger: GACTGAGTCGTGGTCCTGCCACGCACAAGCAGTGCT...TGATCTGAGCAGGTGAAAAGTCACTCTAGGCTTCTGTGAGGACAGAGTGGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| 3UTR CAA 72 bp | GTCAACAGCGTACTAACCATTAGCGAGCATGCGCCCTaGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VNSVLTISEHAP*LKGSLLCRSST Trigger: AGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTCGCTAATGGTTAGTACGCTGTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
||
| CDS-3UTR TCA 90 bp | GGGACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATACAGCCTTTCGTAACTaGTTTGTGAAAAACAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTHPLGTSSPMLRMAALHTAFRN*FVKNKV Trigger: GACCTTGTTTTTCACAAATCAGTTACGAAAGGCTGT...ATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTTCCATGGGGAGCATCTaGCTGTACAAAAACTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLETSGRVHVHQRSTAVSMGSI*LYKNFK Trigger: TTTGAAGTTTTTGTACAGGCAGATGCTCCCCATGGA...AACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | TCCAAGTCGGCCAGGGTCACTCGCACTCACCCAATAGAAAACGGCCTCCTCCCAGGTAGTCTACGTCTTTaGACTGAATATAGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SKSARVTRTHPIENGLLPGSLRL*TEYRTP Trigger: TGGTGTCCTATATTCAGTGCAAAGACGTAGACTACC...TGGGAGGAGGCCGTTTTCTATTGGGTGAGTGCGAGTGACCCTGGCCGACTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAATCCTGGATAAATCCTaGTCTGTCACACATAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SCWRLRGECTCTRGLRLLILDKS*SVTHNR Trigger: CCGGTTATGTGTGACAGAGCAGGATTTATCCAGGAT...TAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR TCA 90 bp | TACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTGGGAAAGAAGTGTGGCGCTCCTTCCGCTTCTaGGCCTCGATCCTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTAATETNRSTGGGKEVWRSFRF*ASILFS Trigger: AGAGAAAAGGATCGAGGCTCAGAAGCGGAAGGAGCG...CCACACTTCTTTCCCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR TCA 90 bp | ACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACAGGAAATGTGCCACTGTaGTTAGCATCTCGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSGRVHVHQRSTAVKKGTGNVPL*LASRFP Trigger: AGGAAAACGAGATGCTAATCACAGTGGCACATTTCC...TGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACGAACTTACACCATTTaGCATCCCCTTTGGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TSGRVHVHQRSTAVKKGTRTYTI*HPLWGL Trigger: TAAACCCCAAAGGGGATGGCAAATGGTGTAAGTTCG...TGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAGCCCCAGGAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATTGACTGTTATCGTTTTCTaGGTCATCCTTCTGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GEEPQEGPASDMVRRTLLTVIVF*VILLKH Trigger: GTGTTTCAGAAGGATGACCCAGAAAACGATAACAGT...CAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTCCTGGGGCTCCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACAAATCCAGGGTCATTaGGGATCGTTTTGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGRVHVHQRSTAVKKGTQIQGH*GSFCHR Trigger: TCTGTGACAAAACGATCCCCAATGACCCTGGATTTG...TGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | GACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATTGCATGTTACCAGGTTGTaGCTCAAAGTCCTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: DSPPRNLFSHAADGCLALHVTRL*LKVLQI Trigger: AATTTGAAGGACTTTGAGCCACAACCTGGTAACATG...CAATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAACATATAGGCATTTGTaGAGTGTCGAACAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCWRLRGECTCTRGLRLLTYRHL*SVEQTD Trigger: ATCTGTCTGTTCGACACTGCACAAATGCCTATATGT...TAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | CACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACGCACTGTCACTGTTATCGTTTTCTaGGTCATCCTTCTGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: HVHQRSTAVKKGTHPRTVTVIVF*VILLKH Trigger: GTGTTTCAGAAGGATGACCCAGAAAACGATAACAGT...GACAGTGCGTGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACCAAACACCTCTTTGTaGAAATGTGCCACTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TSGRVHVHQRSTAVKKGTPNTSL*KCATVI Trigger: AATCACAGTGGCACATTTCCACAAAGAGGTGTTTGG...TGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| 3UTR CAA 72 bp | GAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATaGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: EGPASDMVRRTL*TRAVFSGLPLQ Trigger: CTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| 3UTR CAA 72 bp | TTAAAAAGGGCACACACCCACGCACTGTCCCTCGCCTaGGACACGGGAAGGAAGTCAGTTGTGGATTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKRAHTHALSLA*DTGRKSVVDFN Trigger: ATTAAAATCCACAACTGACTTCCTTCCCGTGTCCAAGGCGAGGGACAGTGCGTGGGTGTGTGCCCTTTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| CDS-3UTR GCA 90 bp | TCGTCCACTCTGTCCTCACAGAAGCCTAGAGTGACTTTTCACCTGCTCAGATCATATTATCTTCAGCACTaGTTGTGCGTGGCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTLSSQKPRVTFHLLRSYYLQH*LCVAGP Trigger: TGGTCCTGCCACGCACAAGCAGTGCTGAAGATAATA...TGATCTGAGCAGGTGAAAAGTCACTCTAGGCTTCTGTGAGGACAGAGTGGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGAATTGGTGTACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTGGTCCCGGACACAGCCATaGTTGTCTGGGTATAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRIGVHCCYRNKQKYWGWSRTQP*LSGYSV Trigger: AACACTATACCCAGACAAGCATGGCTGTGTCCGGGA...CCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTACACCAATTCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR GCA 90 bp | CTCCAACAAAAAGGGAAACAAGGAGAAGACTCAAATAAAGCTACGCAGAGTGTCTGTCCTCTTCTGCGTTaGTGTGCCCATCACTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQQKGKQGEDSNKATQSVCPLLR*CAHHSG Trigger: CCCTGAGTGATGGGCACAGCAACGCAGAAGAGGACA...GACACTCTGCGTAGCTTTATTTGAGTCTTCTCCTTGTTTCCCTTTTTGTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACATATAGGACACCATTTTaGCTCGGAATAACTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSGRVHVHQRSTAVKKGTYRTPF*LGITLE Trigger: TTCCAAAGTTATTCCGAGGCAAAATGGTGTCCTATA...TGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | ATTAGCGAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTACATATAGGCATTTGTaGAGTGTCGAACAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISEHAPLLKGSLLCRSSTTYRHL*SVEQTD Trigger: ATCTGTCTGTTCGACACTGCACAAATGCCTATATGT...AGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTCGCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTCTGTCCTCACAGAAGTTAGCTTTGATTCCCTaGTGTACACTAACATATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLKGSLLCRSSTLSSQKLALIP*CTLTYR Trigger: CCTATATGTTAGTGTACATCAGGGAATCAAAGCTAA...CTTCTGTGAGGACAGAGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR TCA 90 bp | AAGTACTGGGGGTGGGAAAGAAGTGTGGCTTGCTCCTTCTATCTGCACTCCAAATATAACCTTGAGACTTaGAAAACTGCAGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KYWGWERSVACSFYLHSKYNLET*KTAAAW Trigger: CCATGCTGCTGCAGTTTTTCAAGTCTCAAGGTTATA...TTTGGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR TCA 90 bp | AAGTACTGGGGGTGGGAAAGAAGTGTGGCTTGCTCCTTCTATCTGCACTCCAAATCCTATTTGATAATGTaGCCACAAATCCAGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KYWGWERSVACSFYLHSKSYLIM*PQIQGH Trigger: ATGACCCTGGATTTGTGGTCACATTATCAAATAGGA...TTTGGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR GCA 90 bp | TACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTGGGAAAGAAGTGTGGACAAAACTGGTCCTCTaGAACTATCTGCACTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YTAATETNRSTGGGKEVWTKLVL*NYLHLH Trigger: ATGCAAGTGCAGATAGTTGCAGAGGACCAGTTTTGT...CCACACTTCTTTCCCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| 3UTR CAA 72 bp | ATCCTATTTGATAATGTGACCACAAATCCAGGGTCATaGGGGATCGTTTTGTCACAGAAGATGACGTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: ILFDNVTTNPGS*GIVLSQKMTST Trigger: GGTCGACGTCATCTTCTGTGACAAAACGATCCCCAATGACCCTGGATTTGTGGTCACATTATCAAATAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGAACACTATTGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACAGTTCTTCAGAACCTTaGACACAGTGTACCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RRTLLTRAVFSGLPLQMHSSSEP*TQCTSL Trigger: AAGTGAGGTACACTGTGTTCAAGGTTCTGAAGAACT...GTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAGTGTTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CTATTGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACACAGATCACGGTAGTCTACGTCTTTaGACTGAATATAGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLTRAVFSGLPLQMHTDHGSLRL*TEYRTP Trigger: TGGTGTCCTATATTCAGTGCAAAGACGTAGACTACC...GTGATCTGTGTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CCA 90 bp | CTATTGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACACAGATCACCCAAACACCTCTTTGTaGAAATGTGCCACTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLTRAVFSGLPLQMHTDHPNTSL*KCATVI Trigger: AATCACAGTGGCACATTTCCACAAAGAGGTGTTTGG...GTGATCTGTGTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| 3UTR CAA 72 bp | AAAACAAGGTCTGCAGCAAGCTATTCATGTAACACGTaGCTCCCTGATTCTTTAAGCCGACATAGCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KTRSAASYSCNT*LPDSLSRHSQY Trigger: ATACTGGCTATGTCGGCTTAAAGAATCAGGGAGCAACGTGTTACATGAATAGCTTGCTGCAGACCTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAACACTATTGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACCATGTTACCAGGTTGTaGCTCAAAGTCCTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: RRTLLTRAVFSGLPLQMHHVTRL*LKVLQI Trigger: AATTTGAAGGACTTTGAGCCACAACCTGGTAACATG...GTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAGTGTTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| 3UTR CAA 72 bp | AGCAAAAATGGAATTCCAAACGTCCCAAACACCTCTTaGTGGAAATGTGCCACTGTGATTAGCATCTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKNGIPNVPNTS*WKCATVISISF Trigger: AAACGAGATGCTAATCACAGTGGCACATTTCCACAAAGAGGTGTTTGGGACGTTTGGAATTCCATTTTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGAACACTATTGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACCTGTGCAACTGTCTTTaGAACCTGAAAATAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRTLLTRAVFSGLPLQMHLCNCL*NLKIVH Trigger: ATGAACTATTTTCAGGTTGCAAAGACAGTTGCACAG...GTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAGTGTTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR GCA 90 bp | CTCCAACAAAAAGGGAAACAAGGAGAAGACTCAAATAAAGCTACGCAGAGTGTCTATAGGACACCATTTTaGCTCGGAATAACTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQQKGKQGEDSNKATQSVYRTPF*LGITLE Trigger: TTCCAAAGTTATTCCGAGGCAAAATGGTGTCCTATA...GACACTCTGCGTAGCTTTATTTGAGTCTTCTCCTTGTTTCCCTTTTTGTTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| 3UTR CAA 72 bp | CCTAGAGTGACTTTTCACCTGCTCAGATCATTACATTaGCCAATGGGCAACAGAGTAAACCTTAATTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: PRVTFHLLRSLH*PMGNRVNLNCI Trigger: GATACAATTAAGGTTTACTCTGTTGCCCATTGGCAAATGTAATGATCTGAGCAGGTGAAAAGTCACTCTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
||
| 3UTR CAA 72 bp | CAACATTTTCCAGCAAAAAGGCAATATACAGGAGAATaGGTGTACACTGCTGCTACAGAAACAAACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHFPAKRQYTGE*VYTAATETNRS Trigger: ACTTCTGTTTGTTTCTGTAGCAGCAGTGTACACCAATTCTCCTGTATATTGCCTTTTTGCTGGAAAATGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
||
| CDS-3UTR CAA 90 bp | CAGGACCTGGGCAGGTGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGCCCCAGTCGTTTTCCTaGTGGAAGAACAAGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDLGRWPGCLRQPGTSARPQSFS*WKNKWL Trigger: CAGCCACTTGTTCTTCCACAAGGAAAACGACTGGGG...CCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCACCTGCCCAGGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | TGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGCTCTTTGGGGCTTTGTaGAAGTGGTCAAGCCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: WPGCLRQPGTSARDSPPRLFGAL*KWSSPS Trigger: GCTAGGGCTTGACCACTTCAACAAAGCCCCAAAGAG...CCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | CAGGACCTGGGCAGGTGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGTGCAACTATCTGCACTaGCATGTAGAGATGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QDLGRWPGCLRQPGTSARCNYLH*HVEMGF Trigger: GAAGCCCATCTCTACATGCAAGTGCAGATAGTTGCA...CCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCACCTGCCCAGGTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACACAAATCCAGGGTCATaGGGGATCGTTTTGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PGCLRQPGTSARDSPPRNTNPGS*GIVLSQ Trigger: CTGTGACAAAACGATCCCCAATGACCCTGGATTTGT...GTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | TCCAAGTCGGCCAGGGTCACTCGCACTCACCCAATAGAAAACGGCCTCCTCCCATATCTTCAGCACTGCTaGTGCGTGGCAGGACCACGA | + |
|
Preference number: 5 (lower is better) Translates to: SKSARVTRTHPIENGLLPYLQHC*CVAGPR Trigger: TCGTGGTCCTGCCACGCACAAGCAGTGCTGAAGATA...TGGGAGGAGGCCGTTTTCTATTGGGTGAGTGCGAGTGACCCTGGCCGACTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTTATCTTCAGCACTGCTaGTGCGTGGCAGGACCACGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLETSGRVHVHQRSTAVYLQHC*CVAGPR Trigger: TCGTGGTCCTGCCACGCACAAGCAGTGCTGAAGATA...AACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTCGAACTTACACCATTaGCCATCCCCTTTGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AACANQGLLPGTHPLGTSSNLHH*PSPLGF Trigger: AAACCCCAAAGGGGATGGCAAATGGTGTAAGTTCGA...AGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCAAGTCTCCCTGATGCTTaGTCACCGAGCTCCACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRVHVHQRSTAVKKGTHPSLPDA*SPSSTA Trigger: AGCCGTGGAGCTCGGTGACAAAGCATCAGGGAGACT...TGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | TGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGACCTGGGTCCCAAACACCTCTTaGTGGAAATGTGCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WTSLLISLTSCRAGGRTWVPNTS*WKCATV Trigger: CACAGTGGCACATTTCCACAAAGAGGTGTTTGGGAC...CCAGGTCCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | TGGACGAGCCTACTCATCAGCCTGACTAGCTGCAGGGCTGGTGGCAGGACCTGGGCCGTCCCTATAACCTaGAGACTTGAAAAACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WTSLLISLTSCRAGGRTWAVPIT*RLEKLQ Trigger: CTGCAGTTTTTCAAGTCTCAAGGTTATAGGGACGGC...CCAGGTCCTGCCACCAGCCCTGCAGCTAGTCAGGCTGATGAGTAGGCTCGTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTCTGTATCCGCTTCATCACCTCTCGGAAATGCTCACCCTGGTGTATCCATGTCCTCTTCTGCGTaGCTGTGCCCATCACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSVSASSPLGNAHPGVSMSSSA*LCPSLR Trigger: CCTGAGTGATGGGCACAGCAACGCAGAAGAGGACAT...GGATACACCAGGGTGAGCATTTCCGAGAGGTGATGAAGCGGATACAGAGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160326.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACCCCAGTCGTTTTCCTaGTGGAAGAACAAGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRVHVHQRSTAVKKGTHPPQSFS*WKNKWL Trigger: CAGCCACTTGTTCTTCCACAAGGAAAACGACTGGGG...TGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACACTTCAAAGGTGACTTaGTCATCATCGATGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGCLRQPGTSARDSPPRNTSKVT*SSSMNP Trigger: AGGATTCATCGATGATGACAAAGTCACCTTTGAAGT...GTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGAGCCCCAGGAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATTGAGCCAGTATGCTTCTTaGAGTCCCACGCAACTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GEEPQEGPASDMVRRTLLSQYAS*SPTQLH Trigger: ATGGAGTTGCGTGGGACTCAAAGAAGCATACTGGCT...CAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTCCTGGGGCTCCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | TGGCCAGGCTGCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGGTAAAGTTTCTTAGGTaGTCTTGGCTTGAAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: WPGCLRQPGTSARDSPPRVKFLR*SWLEEL Trigger: CAATTCTTCAAGCCAAGACAACCTAAGAAACTTTAC...CCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGCAGCCTGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTGCTGGAGACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTACAAATCCAGGGTCATaGGGGATCGTTTTGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLETSGRVHVHQRSTAVTNPGS*GIVLSQ Trigger: CTGTGACAAAACGATCCCCAATGACCCTGGATTTGT...AACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGTCTCCAGCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | GACTCACCCCCTAGGAACCTCTTCTCCCATGCTGCGGATGGCTGCCTTGCATTGGAATCCTACGCTTTTTaGGTGTGGTCTGTCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: DSPPRNLFSHAADGCLALESYAF*VWSVWI Trigger: TATCCAGACAGACCACACCAAAAAAGCGTAGGATTC...CAATGCAAGGCAGCCATCCGCAGCATGGGAGAAGAGGTTCCTAGGGGGTGAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | GAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTCTGTCCTCGAACTTACACCATTaGCCATCCCCTTTGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EHAPLLKGSLLCRSSTLSSNLHH*PSPLGF Trigger: AAACCCCAAAGGGGATGGCAAATGGTGTAAGTTCGA...GGACAGAGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR CAA 90 bp | CACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACGCACTGTCTGCAACTATCTGCACTaGCATGTAGAGATGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HVHQRSTAVKKGTHPRTVCNYLH*HVEMGF Trigger: GAAGCCCATCTCTACATGCAAGTGCAGATAGTTGCA...GACAGTGCGTGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
||
| CDS-3UTR CAA 90 bp | CGCTCGTCCACTCTGTCCTCACAGAAGCCTAGAGTGACTTTTCACCTGCTCAGACTCTTTGGGGCTTTGTaGAAGTGGTCAAGCCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSTLSSQKPRVTFHLLRLFGAL*KWSSPS Trigger: GCTAGGGCTTGACCACTTCAACAAAGCCCCAAAGAG...TCTGAGCAGGTGAAAAGTCACTCTAGGCTTCTGTGAGGACAGAGTGGACGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
||
| CDS-3UTR CAA 90 bp | AAGTACTGGGGGTGGGAAAGAAGTGTGGCTTGCTCCTTCTATCTGCACTCCAAAATGTCCTCTTCTGCGTaGCTGTGCCCATCACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KYWGWERSVACSFYLHSKMSSSA*LCPSLR Trigger: CCTGAGTGATGGGCACAGCAACGCAGAAGAGGACAT...TTTGGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | GCCTGCGCCAACCAGGGACTTCTGCCAGGGACTCACCCCCTAGGAACCTCTTCTTTAGGTTGTCTTGGCTaGAAGAATTGTAGAAGATCT | + |
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Preference number: 5 (lower is better) Translates to: ACANQGLLPGTHPLGTSSLGCLG*KNCRRS Trigger: AGATCTTCTACAATTCTTCAAGCCAAGACAACCTAA...AGAAGAGGTTCCTAGGGGGTGAGTCCCTGGCAGAAGTCCCTGGTTGGCGCAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CAA 90 bp | AGGAGAATTGGTGTACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTGGAGTCTCCCTGATGCTTaGTCACCGAGCTCCACGGCT | + |
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Preference number: 5 (lower is better) Translates to: RRIGVHCCYRNKQKYWGWSLPDA*SPSSTA Trigger: AGCCGTGGAGCTCGGTGACAAAGCATCAGGGAGACT...CCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTACACCAATTCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | ATTAGCGAGCATGCGCCCTTGCTAAAAGGCTCTCTCCTTTGTCGCTCGTCCACTTCATACTCATCTTCATaGATGTACTGGTGCCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: ISEHAPLLKGSLLCRSSTSYSSS*MYWCRP Trigger: GGGCCGGCACCAGTACATCAATGAAGATGAGTATGA...AGTGGACGAGCGACAAAGGAGAGAGCCTTTTAGCAAGGGCGCATGCTCGCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGGAGCCCCAGGAAGGGCCAGCATCGGACATGGTGAGGAGAACACTATTGTCTGTGCAACTGTCTTaGCAACCTGAAAATAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: GEEPQEGPASDMVRRTLLSVQLS*QPENSS Trigger: TGAACTATTTTCAGGTTGCAAAGACAGTTGCACAGA...CAATAGTGTTCTCCTCACCATGTCCGATGCTGGCCCTTCCTGGGGCTCCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CAA 90 bp | GGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCATATTCATGTAACACGTaGCTCCCTGATTCTTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: GRVHVHQRSTAVKKGTHPYSCNT*LPDSLS Trigger: GCTTAAAGAATCAGGGAGCAACGTGTTACATGAATA...TGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CAA 90 bp | CACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACACACCCACGCACTGTCAACTCAAACCTGTCATaGATCTTGATGTTTTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: HVHQRSTAVKKGTHPRTVNSNLS*ILMFWS Trigger: GGACCAAAACATCAAGATCAATGACAGGTTTGAGTT...GACAGTGCGTGGGTGTGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CAA 90 bp | TCCAAGTCGGCCAGGGTCACTCGCACTCACCCAATAGAAAACGGCCTCCTCCCATTAGGTTGTCTTGGCTaGAAGAATTGTAGAAGATCT | + |
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Preference number: 5 (lower is better) Translates to: SKSARVTRTHPIENGLLPLGCLG*KNCRRS Trigger: AGATCTTCTACAATTCTTCAAGCCAAGACAACCTAA...TGGGAGGAGGCCGTTTTCTATTGGGTGAGTGCGAGTGACCCTGGCCGACTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | CTATTGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACACAGATCACATGTCCTCTTCTGCGTaGCTGTGCCCATCACTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLTRAVFSGLPLQMHTDHMSSSA*LCPSLR Trigger: CCTGAGTGATGGGCACAGCAACGCAGAAGAGGACAT...GTGATCTGTGTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CAA 90 bp | ACTTCGGGGAGAGTGCACGTGCACCAGAGGTCTACGGCTGTTAAAAAGGGCACATCTGTGCAACTGTCTTaGCAACCTGAAAATAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: TSGRVHVHQRSTAVKKGTSVQLS*QPENSS Trigger: TGAACTATTTTCAGGTTGCAAAGACAGTTGCACAGA...TGTGCCCTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCCCGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CAA 90 bp | TACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTGGGAAAGAAGTGTGGGTCCCAAACACCTCTTaGTGGAAATGTGCCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: YTAATETNRSTGGGKEVWVPNTS*WKCATV Trigger: CACAGTGGCACATTTCCACAAAGAGGTGTTTGGGAC...CCACACTTCTTTCCCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | CCCATGCTGCGGATGGCTGCCTTGCATTGTGGTTACCATAAAAGAACTCTCATTCGGACACAGCCATGCTaGTCTGGGTATAGTGTTATT | + |
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Preference number: 5 (lower is better) Translates to: PMLRMAALHCGYHKRTLIRTQPC*SGYSVI Trigger: AATAACACTATACCCAGACAAGCATGGCTGTGTCCG...AATGAGAGTTCTTTTATGGTAACCACAATGCAAGGCAGCCATCCGCAGCATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CAA 90 bp | TACACTGCTGCTACAGAAACAAACAGAAGTACTGGGGGTGGGAAAGAAGTGTGGGAATCCTACGCTTTTTaGGTGTGGTCTGTCTGGATA | + |
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Preference number: 5 (lower is better) Translates to: YTAATETNRSTGGGKEVWESYAF*VWSVWI Trigger: TATCCAGACAGACCACACCAAAAAAGCGTAGGATTC...CCACACTTCTTTCCCACCCCCAGTACTTCTGTTTGTTTCTGTAGCAGCAGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | CTATTGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACACAGATCACAGCCAGTATGCTTCTTaGAGTCCCACGCAACTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LLTRAVFSGLPLQMHTDHSQYAS*SPTQLH Trigger: ATGGAGTTGCGTGGGACTCAAAGAAGCATACTGGCT...GTGATCTGTGTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CAA 90 bp | CAAACTAGACACGCAGCTGGCATTAGCTCCAACAAAAAGGGAAACAAGGAGAAGCGGACACAGCCATGCTaGTCTGGGTATAGTGTTATT | + |
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Preference number: 5 (lower is better) Translates to: QTRHAAGISSNKKGNKEKRTQPC*SGYSVI Trigger: AATAACACTATACCCAGACAAGCATGGCTGTGTCCG...CTTCTCCTTGTTTCCCTTTTTGTTGGAGCTAATGCCAGCTGCGTGTCTAGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | AGGAGAACACTATTGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACTCATACTCATCTTCATaGATGTACTGGTGCCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RRTLLTRAVFSGLPLQMHSYSSS*MYWCRP Trigger: GGGCCGGCACCAGTACATCAATGAAGATGAGTATGA...GTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAGTGTTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS-3UTR CAA 90 bp | AAGTACTGGGGGTGGGAAAGAAGTGTGGCTTGCTCCTTCTATCTGCACTCCAAAACTTCAAAGGTGACTTaGTCATCATCGATGAATCCT | + |
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Preference number: 5 (lower is better) Translates to: KYWGWERSVACSFYLHSKTSKVT*SSSMNP Trigger: AGGATTCATCGATGATGACAAAGTCACCTTTGAAGT...TTTGGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | AAGTACTGGGGGTGGGAAAGAAGTGTGGCTTGCTCCTTCTATCTGCACTCCAAATATTCATGTAACACGTaGCTCCCTGATTCTTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: KYWGWERSVACSFYLHSKYSCNT*LPDSLS Trigger: GCTTAAAGAATCAGGGAGCAACGTGTTACATGAATA...TTTGGAGTGCAGATAGAAGGAGCAAGCCACACTTCTTTCCCACCCCCAGTACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | CCCATGCTGCGGATGGCTGCCTTGCATTGTGGTTACCATAAAAGAACTCTCATTGTAAAGTTTCTTAGGTaGTCTTGGCTTGAAGAATTG | + |
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Preference number: 5 (lower is better) Translates to: PMLRMAALHCGYHKRTLIVKFLR*SWLEEL Trigger: CAATTCTTCAAGCCAAGACAACCTAAGAAACTTTAC...AATGAGAGTTCTTTTATGGTAACCACAATGCAAGGCAGCCATCCGCAGCATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS TCA 90 bp | CTTCTGGAGGAGTGTACCTCAGGTACCAGGGAAGCAACTCTGAGATaGTATTACTTTGAGGAAAATAGATTGTATCCTGAGTCAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: LLEECTSGTREATLR*YYFEENRLYPESKS Trigger: GGATTTTGACTCAGGATACAATCTATTTTCCTCAAAGTAATATCATCTCAGAGTTGCTTCCCTGGTACCTGAGGTACACTCCTCCAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS-3UTR CAA 90 bp | CTATTGACTAGGGCTGTTTTCTCTGGTTTGCCTTTACAGATGCACACAGATCACAACTCAAACCTGTCATaGATCTTGATGTTTTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLTRAVFSGLPLQMHTDHNSNLS*ILMFWS Trigger: GGACCAAAACATCAAGATCAATGACAGGTTTGAGTT...GTGATCTGTGTGCATCTGTAAAGGCAAACCAGAGAAAACAGCCCTAGTCAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS GCA 72 bp | CCAGCTTCCATCTCCATGTCCTCGGGCTCGCTCAGCTaGTGCTCGCCCGCTTTCTGCTGCTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PASISMSSGSLS*CSPAFCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGAAAGCGGGCGAGCAGCAGCTGAGCGAGCCCGAGGACATGGAGATGGAAGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000161046.9 |
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| CDS GCA 72 bp | GCTTCCATCTCCATGTCCTCGGGCTCGCTCAGCTGCTaGTCGCCCGCTTTCTGCTGCTGCTGCTGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ASISMSSGSLSC*SPAFCCCCCCC Trigger: ACAGCAGCAGCAGCAGCAGCAGAAAGCGGGCGAGCAGCAGCTGAGCGAGCCCGAGGACATGGAGATGGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160326.8 ENSMUST00000161046.9 |
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| CDS GCA 72 bp | GGAGCGCCAACTGGTGTCATCCTCCATGTCCTCTTCTaGGTTGCTGTGCCCATCACTCAGGGTTACATTCCC | + |
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Preference number: 6 (lower is better) Translates to: GAPTGVILHVLF*VAVPITQGYIP Trigger: GGGAATGTAACCCTGAGTGATGGGCACAGCAACGCAGAAGAGGACATGGAGGATGACACCAGTTGGCGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160326.8 ENSMUST00000160405.8 ENSMUST00000161046.9 |
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| CDS CAA 90 bp | TGGTATTCGATGCCTTCATTCCAAGGACAGTTAACCAGTATAAACTaGGTTATGACGCTGGTGCTGGGGACTTCTGGAGGAGTGTACCTC | + |
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Preference number: 6 (lower is better) Translates to: WYSMPSFQGQLTSIN*VMTLVLGTSGGVYL Trigger: GAGGTACACTCCTCCAGAAGTCCCCAGCACCAGCGTCATAACCAAGTTTATACTGGTTAACTGTCCTTGGAATGAAGGCATCGAATACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS CAA 72 bp | ATGCCTTCATTCCAAGGACAGTTAACCAGTATAAACTaGGTTATGACGCTGGTGCTGGGGACTTCTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: MPSFQGQLTSIN*VMTLVLGTSGG Trigger: TCCTCCAGAAGTCCCCAGCACCAGCGTCATAACCAAGTTTATACTGGTTAACTGTCCTTGGAATGAAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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| CDS TCA 72 bp | GAGTGTACCTCAGGTACCAGGGAAGCAACTCTGAGATaGTATTACTTTGAGGAAAATAGATTGTATCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ECTSGTREATLR*YYFEENRLYPE Trigger: CTCAGGATACAATCTATTTTCCTCAAAGTAATATCATCTCAGAGTTGCTTCCCTGGTACCTGAGGTACACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160405.8 |
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