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Pregenerated sensors for USP51 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000067215

Ensembl transcript IDs: ENSMUST00000095755.4

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TCCGTGTTTGGGGTCTGGGTCCAGGCCTGGATCTACGTCTGGAATTaGGCCAGGCCACCGACCGCTGCTTGGGCAGGGGTGGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: SVFGVWVQAWIYVWN*ARPPTAAWAGVEVA
Trigger: CGCCACCTCCACCCCTGCCCAAGCAGCGGTCGGTGGCCTGGCGCAATTCCAGACGTAGATCCAGGCCTGGACCCAGACCCCAAACACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CCA 90 bp CATAGCTGCCACTGCCCCTACTTGTTAAGTTCTCCGACGTGGGCTTaGGCTCCGGCCACAGCTCCGGCTTCATCTCCTGGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: HSCHCPYLLSSPTWA*APATAPASSPGLPV
Trigger: CACAGGGAGCCCAGGAGATGAAGCCGGAGCTGTGGCCGGAGCCCAAGCCCACGTCGGAGAACTTAACAAGTAGGGGCAGTGGCAGCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CCA 90 bp CCTTCTCATAGCTGCCACTGCCCCTACTTGTTAAGTTCTCCGACGTaGGCTTGGGCTCCGGCCACAGCTCCGGCTTCATCTCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: PSHSCHCPYLLSSPT*AWAPATAPASSPGL
Trigger: GAGCCCAGGAGATGAAGCCGGAGCTGTGGCCGGAGCCCAAGCCCACGTCGGAGAACTTAACAAGTAGGGGCAGTGGCAGCTATGAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS TCA 90 bp ACCCAGGTCTTCGGGCCTTGTAAACCACTTCAGGCAATCTGTAAGTaGGATGACTCGTGGCTTCTGGCCATCCCTACTCGATGTGCTACT +
Preference number: 5 (lower is better)
Translates to: TQVFGPCKPLQAICK*DDSWLLAIPTRCAT
Trigger: AGTAGCACATCGAGTAGGGATGGCCAGAAGCCACGAGTCATCTCACTTACAGATTGCCTGAAGTGGTTTACAAGGCCCGAAGACCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS TCA 90 bp CGCAGGTTTCTCTGCCAGTTTTTAGCTACTTTAAAGCTCTCTACATaGCAGCAGCCTGTGGGACCCTTATTAGACCCTACCTCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: RRFLCQFLATLKLST*QQPVGPLLDPTSSK
Trigger: TTTACTGGAGGTAGGGTCTAATAAGGGTCCCACAGGCTGCTGTCATGTAGAGAGCTTTAAAGTAGCTAAAAACTGGCAGAGAAACCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CCA 90 bp AACAAAGAATACTTATTCTCACTGGGTACACACTCTGTTAATGGCTaGCCTTTCATTATGCTTTCTTTAGTAGAAGCCAAGAACGGGGTC +
Preference number: 5 (lower is better)
Translates to: NKEYLFSLGTHSVNG*PFIMLSLVEAKNGV
Trigger: GACCCCGTTCTTGGCTTCTACTAAAGAAAGCATAATGAAAGGCCAGCCATTAACAGAGTGTGTACCCAGTGAGAATAAGTATTCTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS GCA 72 bp GGGGTCTGGGTCCAGGCCTGGATCTACGTCTGGAATTaGGCCAGGCCACCGACCGCTGCTTGGGCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: GVWVQAWIYVWN*ARPPTAAWAGV
Trigger: CACCCCTGCCCAAGCAGCGGTCGGTGGCCTGGCGCAATTCCAGACGTAGATCCAGGCCTGGACCCAGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CAA 72 bp TGGGGTCTGGGTCCAGGCCTGGATCTACGTCTGGAATaGCGCCAGGCCACCGACCGCTGCTTGGGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: WGLGPGLDLRLE*RQATDRCLGRG
Trigger: ACCCCTGCCCAAGCAGCGGTCGGTGGCCTGGCGCAATTCCAGACGTAGATCCAGGCCTGGACCCAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CAA 90 bp TTCCGTGTTTGGGGTCTGGGTCCAGGCCTGGATCTACGTCTGGAATaGCGCCAGGCCACCGACCGCTGCTTGGGCAGGGGTGGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: FRVWGLGPGLDLRLE*RQATDRCLGRGGGG
Trigger: GCCACCTCCACCCCTGCCCAAGCAGCGGTCGGTGGCCTGGCGCAATTCCAGACGTAGATCCAGGCCTGGACCCAGACCCCAAACACGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS TCA 72 bp GGCTTGCGGCGCGGGCAAACCGAGCTGGAGCTGGTGTaGCAAGCAGCCGGGATAGAAGGGAGCACCTTCTCA +
Preference number: 6 (lower is better)
Translates to: GLRRGQTELELV*QAAGIEGSTFS
Trigger: TGAGAAGGTGCTCCCTTCTATCCCGGCTGCTTGTCACACCAGCTCCAGCTCGGTTTGCCCGCGCCGCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CCA 72 bp CACTGCCCCTACTTGTTAAGTTCTCCGACGTGGGCTTaGGCTCCGGCCACAGCTCCGGCTTCATCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: HCPYLLSSPTWA*APATAPASSPG
Trigger: CCCAGGAGATGAAGCCGGAGCTGTGGCCGGAGCCCAAGCCCACGTCGGAGAACTTAACAAGTAGGGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CAA 72 bp CCACTGCCCCTACTTGTTAAGTTCTCCGACGTGGGCTaGGGCTCCGGCCACAGCTCCGGCTTCATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PLPLLVKFSDVG*GSGHSSGFISW
Trigger: CCAGGAGATGAAGCCGGAGCTGTGGCCGGAGCCCAAGCCCACGTCGGAGAACTTAACAAGTAGGGGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CCA 72 bp AGTAGCTTTTCCGTGTTTGGGGTCTGGGTCCAGGCCTaGATCTACGTCTGGAATTGCGCCAGGCCACCGACC +
Preference number: 6 (lower is better)
Translates to: SSFSVFGVWVQA*IYVWNCARPPT
Trigger: GGTCGGTGGCCTGGCGCAATTCCAGACGTAGATCCAGGCCTGGACCCAGACCCCAAACACGGAAAAGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CAA 72 bp AAGGGAGCACCTTCTCATAGCTGCCACTGCCCCTACTaGTTAAGTTCTCCGACGTGGGCTTGGGCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: KGAPSHSCHCPY*LSSPTWAWAPA
Trigger: GGCCGGAGCCCAAGCCCACGTCGGAGAACTTAACAAGTAGGGGCAGTGGCAGCTATGAGAAGGTGCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CCA 72 bp GCCATCCCTACTCGATGTGCTACTACTAGCCCTCCCTaGAGTATAAGGCCCAGGCAAATCCAAGCTAATGTC +
Preference number: 6 (lower is better)
Translates to: AIPTRCATTSPP*SIRPRQIQANV
Trigger: GACATTAGCTTGGATTTGCCTGGGCCTTATACTCCAGGGAGGGCTAGTAGTAGCACATCGAGTAGGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS TCA 72 bp TTCGGGCCTTGTAAACCACTTCAGGCAATCTGTAAGTaGGATGACTCGTGGCTTCTGGCCATCCCTACTCGA +
Preference number: 6 (lower is better)
Translates to: FGPCKPLQAICK*DDSWLLAIPTR
Trigger: TCGAGTAGGGATGGCCAGAAGCCACGAGTCATCTCACTTACAGATTGCCTGAAGTGGTTTACAAGGCCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CCA 72 bp TTCAGGCAATCTGTAAGTGAGATGACTCGTGGCTTCTaGCCATCCCTACTCGATGTGCTACTACTAGCCCTC +
Preference number: 6 (lower is better)
Translates to: FRQSVSEMTRGF*PSLLDVLLLAL
Trigger: GAGGGCTAGTAGTAGCACATCGAGTAGGGATGGCCAGAAGCCACGAGTCATCTCACTTACAGATTGCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS TCA 72 bp TCTGTTCTTGTGAGTACTACATATTTGACAGATGCATaGCTTTGCCTTACGTTTCCTAGTCTCCGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: SVLVSTTYLTDA*LCLTFPSLRGS
Trigger: GGAACCCCGGAGACTAGGAAACGTAAGGCAAAGTCATGCATCTGTCAAATATGTAGTACTCACAAGAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4
CDS CCA 72 bp GAAAAAGTAAAGACATCTCGCAGACTAAACACAAGCTaGGGCTTGTCATCATACATTTGTGCTTATTTGAAA +
Preference number: 6 (lower is better)
Translates to: EKVKTSRRLNTS*GLSSYICAYLK
Trigger: TTTCAAATAAGCACAAATGTATGATGACAAGCCCCAGCTTGTGTTTAGTCTGCGAGATGTCTTTACTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095755.4