Pregenerated sensors for USP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038429Ensembl transcript IDs: ENSMUST00000047510.10, ENSMUST00000122110.8, ENSMUST00000142058.8, ENSMUST00000153306.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGACCCCACATCAGGGGTTaGGCCATCACAGAGAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ISLRASSAPPQGSKHLRGPHIRG*AITEKQ Trigger: CTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGG...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGAGCTCCTTCCCACTGCTaGGGACAAAAACAAAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: ISLRASSAPPQGSKHLRGAPSHC*GQKQKG Trigger: CCCTTTTTGTTTTTGTCCCCAGCAGTGGGAAGGAGC...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCGCTCCTTCCCACTGCTaGGGACAAAAACAAAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PPLERCIKPHPHTHTGKSAPSHC*GQKQKG Trigger: CCCTTTTTGTTTTTGTCCCCAGCAGTGGGAAGGAGC...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGAGTACCCCTCCTCTTaGTTTGGCCATTCTCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: EATRSHCGQAVGPSCPIPEYPSS*FGHSPM Trigger: CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTC...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGAGTACCCCTCCTCTTaGTTTGGCCATTCTCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: TQVRARPTSGVGPSQRSREYPSS*FGHSPM Trigger: CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTC...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTATTTTGGCATTTTTCCAGAGGACCATAAAGACAGACCGGAGGCTGAGGCAGACTGTGGACAGGCAGTaGGCCCCTCCTGTCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: CILAFFQRTIKTDRRLRQTVDRQ*APPVPS Trigger: GGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGT...CTGCCTCAGCCTCCGGTCTGTCTTTATGGTCCTCTGGAAAAATGCCAAAATACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCACCCGGTCTCCCGCCTTaGGGACACGGATCGTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QVRARPTSGVGPSQRSRAPGLPP*GHGSSV Trigger: TACCGACGATCCGTGTCCCCAAGGCGGGAGACCGGG...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCTGGCCACCTGGGTGCTaGAGTCTTGGGTGGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGWPPGC*SLGWGP Trigger: CGGACCCCACCCAAGACTTCAGCACCCAGGTGGCCA...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTTGGGCTCATCCGGAGTaGCCAGGGGTGGGGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPWAHPE*PGVGQC Trigger: ACATTGCCCCACCCCTGGTCACTCCGGATGAGCCCA...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCGGTTGTTGCCCCCACTaGCATCGAAGTAGCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCGCCPH*HRSSAV Trigger: GACGGCGCTACTTCGATGGCAGTGGGGGCAACAACC...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGACCCGGTCTCCCGCCTTaGGGACACGGATCGTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRPGLPP*GHGSSV Trigger: TACCGACGATCCGTGTCCCCAAGGCGGGAGACCGGG...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCGGGCTTCTTCCGAGGTaGGTCTCCAGTGCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCGLLPR*VSSACT Trigger: AGTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCC...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCCCCAGCTTGGCCACCTaGGTGCTGAAGTCTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCPSLAT*VLKSWV Trigger: CACCCAAGACTTCAGCACCCAGGTGGCCAAGCTGGG...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCGGAGTGACCAGGGGTaGGGCAATGTCAGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCRSDQG*GNVRQL Trigger: GAGCTGCCTGACATTGCCCCACCCCTGGTCACTCCG...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCGAAAGTCAGGGATGCTaGAGAGCACCTGGACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCESQGC*RAPGPR Trigger: CCGTGGTCCAGGTGCTCTTCAGCATCCCTGACTTTC...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCACCGGCTGTAGCCCTGTaGCCCTCAGCTGGGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QVRARPTSGVGPSQRSRAPAVAL*PSAGRY Trigger: ATATCTCCCAGCTGAGGGGCACAGGGCTACAGCCGG...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCGCACTCGTCTTTATaGACCCGGTCTCCCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPAHSSL*TRSPAL Trigger: CAAGGCGGGAGACCGGGTCCATAAAGACGAGTGCGC...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGACAATGGCCAGCCGGGTaGGCTTCTTCCGAGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRQWPAG*ASSEVG Trigger: ACCCACCTCGGAAGAAGCCCACCCGGCTGGCCATTG...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCCAATGGCCAGCCGGGTaGGCTTCTTCCGAGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGQWPAG*ASSEVG Trigger: ACCCACCTCGGAAGAAGCCCACCCGGCTGGCCATTG...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCACGCGCATGTCGCACTTaGAGCACTTCCAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVRARPTSGVGPSQRSRARACRT*STSSHR Trigger: CCTGTGGCTGGAAGTGCTCCAAGTGCGACATGCGCG...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCCGGAGTGACCAGGGGTaGGGCAATGTCAGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGRSDQG*GNVRQL Trigger: GAGCTGCCTGACATTGCCCCACCCCTGGTCACTCCG...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTTGGTCACCCGATCTCTaGCAATGTCAGGAAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCWSPDL*QCQEAP Trigger: GGGGGCTTCCTGACATTGTCAGAGATCGGGTGACCA...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCAGCATGCTTGGACACCTaGCGGACTTCCCCATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVRARPTSGVGPSQRSRAACLDT*RTSPSQ Trigger: TTGGGATGGGGAAGTCCGTCAGGTGTCCAAGCATGC...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCATGCTTGGACACCTaGCGGACTTCCCCATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPACLDT*RTSPSQ Trigger: TTGGGATGGGGAAGTCCGTCAGGTGTCCAAGCATGC...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGAGCCGTCTGTCAGGTTaGGCCACAGGTTCTCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQSRLSG*ATGSRA Trigger: TGCGCGAGAACCTGTGGCTCAACCTGACAGACGGCT...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCTTGAGTGGCACGCCTaGCTCCTGGATCAACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCLEWHA*LLDQLP Trigger: TGGGAGTTGATCCAGGAGTCAGGCGTGCCACTCAAG...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTCTGCTCCCCATCACCTaGCTCCAGTGCTGGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPLLPIT*LQCWLR Trigger: TCTAAGCCAGCACTGGAGTCAGGTGATGGGGAGCAG...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTCTTCCAGGCAGGAGCTaGAGGGCACCTGGGCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGLPGRS*RAPGPE Trigger: TTCGGGCCCAGGTGCCCTTCAGCTCCTGCCTGGAAG...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTTACCCAGGTTCCGGATaGCCGTGTAACCAGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCYPGSG*PCNQAQ Trigger: TTGGGCCTGGTTACACGGGCATCCGGAACCTGGGTA...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGCCGGCTGTAGCCCTGTaGCCCTCAGCTGGGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQPAVAL*PSAGRY Trigger: ATATCTCCCAGCTGAGGGGCACAGGGCTACAGCCGG...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGACCCAGTTCATGGCTaGTTCGGCCCCGCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRDPVHG*FGPAVS Trigger: GGAAACAGCGGGGCCGAAGCAGCCATGAACTGGGTC...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCGACCCAGTTCATGGCTaGTTCGGCCCCGCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGDPVHG*FGPAVS Trigger: GGAAACAGCGGGGCCGAAGCAGCCATGAACTGGGTC...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGCGCGCATGTCGCACTTaGAGCACTTCCAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQRACRT*STSSHR Trigger: CCTGTGGCTGGAAGTGCTCCAAGTGCGACATGCGCG...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGCCCAGCTTGGCCACCTaGGTGCTGAAGTCTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQPSLAT*VLKSWV Trigger: CACCCAAGACTTCAGCACCCAGGTGGCCAAGCTGGG...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGGCCCGAACCAGTTCTaGCAGTGGCACTTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPGPNQF*QWHFLL Trigger: GAGGAGAAAGTGCCACTGCCAGAACTGGTTCGGGCC...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTTCAGGGCCTGGTCCCTaGAGAAGCCCATGGAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPSGPGP*RSPWRL Trigger: TAGTCTCCATGGGCTTCTCCAGGGACCAGGCCCTGA...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTACCCAGGTTCCGGATaGCCGTGTAACCAGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQYPGSG*PCNQAQ Trigger: TTGGGCCTGGTTACACGGGCATCCGGAACCTGGGTA...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCTGGGCATCCTGCTaGCGATTAGTGGAGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLSWASC*RLVENS Trigger: TGAGTTCTCCACTAATCGGCAGCAGGATGCCCAGGA...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCTCCTGGGCATCCTGCTaGCGATTAGTGGAGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCSWASC*RLVENS Trigger: TGAGTTCTCCACTAATCGGCAGCAGGATGCCCAGGA...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGACTCCTTCAACACCAATaGCCAGCCGGGTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRLLQHQ*PAGWAS Trigger: AGAAGCCCACCCGGCTGGCCATTGGTGTTGAAGGAG...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTTGGGTGGGGTCCGTTaGGGCATTCTGGAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLLGGVR*GILEDL Trigger: AAGATCTTCCAGAATGCCCCAACGGACCCCACCCAA...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCCCATGGAGACTATGGTaGTCACACAGTCCTCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGPWRLW*SHSPPA Trigger: CGCCGGAGGACTGTGTGACCACCATAGTCTCCATGG...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCTGGAGAAGCCCATaGAGACTATGGTGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCPWRSP*RLWWSH Trigger: GTGTGACCACCATAGTCTCCATGGGCTTCTCCAGGG...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGCAAACTTGTCCTCGGTaGGGTCAAACCCTCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLQTCPR*GQTLLQ Trigger: TTGAAGGAGGGTTTGACCTCACCGAGGACAAGTTTG...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTATGTCGATGCCAAAGTaGGACAAGTGCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCMSMPK*DKCSAR Trigger: CCTGGCAGAGCACTTGTCTCACTTTGGCATCGACAT...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCAATGTCGATGCCAAAGTaGGACAAGTGCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVRARPTSGVGPSQRSRAMSMPK*DKCSAR Trigger: CCTGGCAGAGCACTTGTCTCACTTTGGCATCGACAT...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCCCTGGACCACGGAGTTaGGATAGCAGCTGTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGPGPRS*DSSCYP Trigger: TGGGTAACAGCTGCTATCTCAACTCCGTGGTCCAGG...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCTGGATCATCCATGTGTaGCATGACCCAGTTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCWIIHV*HDPVHG Trigger: GCCATGAACTGGGTCATGTCACACATGGATGATCCA...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTGGATCATCCATGTGTaGCATGACCCAGTTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLWIIHV*HDPVHG Trigger: GCCATGAACTGGGTCATGTCACACATGGATGATCCA...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTGCAGGGTTGTCCAACTaGTTGAGGTTGAAGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCAGLSN*LRLKAC Trigger: GCATGCCTTCAACCTCAAGCAGTTGGACAACCCTGC...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGACCACAGCATGGTTGTTaGCCCCACTGCCATCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRPQHGC*PHCHRS Trigger: ACTTCGATGGCAGTGGGGGCAACAACCATGCTGTGG...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGCTCCAGTGCCTGCACTaGTGTCCTCTTCTTTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQLQCLH*CPLLSV Trigger: GACCGAAAGAAGAGGACACCAGTGCAGGCACTGGAG...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGAGGGCTTCTTCCGAGGTaGGTCTCCAGTGCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ISLRASSAPPQGSKHLRGGLLPR*VSSACT Trigger: AGTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCC...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCGGCACGCCTGACTCCTaGATCAACTCCCATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGGTPDS*INSHSP Trigger: TGGTGAATGGGAGTTGATCCAGGAGTCAGGCGTGCC...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGGGCACGCCTGACTCCTaGATCAACTCCCATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQGTPDS*INSHSP Trigger: TGGTGAATGGGAGTTGATCCAGGAGTCAGGCGTGCC...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCCCTCTGGCATCTCAATaGACACATCCAGCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCPLASQ*THPASW Trigger: CCAAGAAGCTGGATGTGTCCATTGAGATGCCAGAGG...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCACATACTTCCTCTaGAAGTCAGGGATGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLSTYFL*KSGMLK Trigger: CTTCAGCATCCCTGACTTTCAGAGGAAGTATGTGGA...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGGGGGCAATGCCATCTTaGACTTCCTTTTGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLGAMPS*TSFCSG Trigger: ACCAGAACAAAAGGAAGTTCAAGATGGCATTGCCCC...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTGTACAGGCAACTGCATaGTGTAGTCAACTCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCVQATA*CSQLAE Trigger: CTCAGCGAGTTGACTACATCATGCAGTTGCCTGTAC...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGCTTCCAGGCAGGAGCTaGAGGGCACCTGGGCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPESNEYPSSLFGHSPMLPGRS*RAPGPE Trigger: TTCGGGCCCAGGTGCCCTTCAGCTCCTGCCTGGAAG...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCTGGGCTCATCCGGAGTaGCCAGGGGTGGGGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLERCIKPHPHTHTGKSWAHPE*PGVGQC Trigger: ACATTGCCCCACCCCTGGTCACTCCGGATGAGCCCA...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTCATCCATGTGTGACATaGCCCAGTTCATGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPHPCVT*PSSWLL Trigger: AAGCAGCCATGAACTGGGTCATGTCACACATGGATG...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTGTCTCTCCACATACTaGTTCCCGAATCCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLCLSTY*FPNPRN Trigger: ATTCCTGGGATTCGGGAAGCAGTATGTGGAGAGACA...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTGAGGTGGGTCTCCAGTaGCTGCACTGGTGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGEVGLQ*LHWCPL Trigger: AAGAGGACACCAGTGCAGGCACTGGAGACCCACCTC...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGACTCCTTCAACACCAATaGCCAGCCGGGTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLRASSAPPQGSKHLRGLLQHQ*PAGWAS Trigger: AGAAGCCCACCCGGCTGGCCATTGGTGTTGAAGGAG...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTTCCCCATCCCAAGCCTaGACCTCCTGCTTTCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGSPSQA*TSCFRE Trigger: CTCTCGAAAGCAGGAGGTCCAGGCTTGGGATGGGGA...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGGTGGGGTCCGTTaGGGCATTCTGGAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQLGGVR*GILEDL Trigger: AAGATCTTCCAGAATGCCCCAACGGACCCCACCCAA...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGAACTTCCTTTTGTTCTaGTACCTGCTCCCCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLNFLLF*YLLPIT Trigger: GGTGATGGGGAGCAGGTACCAGAACAAAAGGAAGTT...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCTGTAGGAAGAATTCCTaGGCATCCTGCTGCCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCCRKNS*ASCCRL Trigger: TAATCGGCAGCAGGATGCCCAGGAATTCTTCCTACA...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTCCTGTGCCCCTCAGCTaGGAGATATCGAGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGPVPLS*EISSSS Trigger: AGAGGAGCTCGATATCTCCCAGCTGAGGGGCACAGG...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGACCTGTGCCCCTCAGCTaGGAGATATCGAGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLRASSAPPQGSKHLRGPVPLS*EISSSS Trigger: AGAGGAGCTCGATATCTCCCAGCTGAGGGGCACAGG...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTTCAGGGCCTGGTCCCTaGAGAAGCCCATGGAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGSGPGP*RSPWRL Trigger: TAGTCTCCATGGGCTTCTCCAGGGACCAGGCCCTGA...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCAGCCGTCTGTCAGGTTaGGCCACAGGTTCTCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLERCIKPHPHTHTGKSSRLSG*ATGSRA Trigger: TGCGCGAGAACCTGTGGCTCAACCTGACAGACGGCT...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGACATCCATGTGTGACATaGCCCAGTTCATGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRHPCVT*PSSWLL Trigger: AAGCAGCCATGAACTGGGTCATGTCACACATGGATG...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTATGAAGGCAAAGAGCTaGTACTTTCCAGGACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPMKAKS*YFPGPS Trigger: GGATGGTCCTGGAAAGTATCAGCTCTTTGCCTTCAT...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCATGTCTCTCCACATACTaGTTCCCGAATCCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVRARPTSGVGPSQRSRACLSTY*FPNPRN Trigger: ATTCCTGGGATTCGGGAAGCAGTATGTGGAGAGACA...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCAGTCTTGTCCGTCTTCTaGATCTTCAGCATGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: QVRARPTSGVGPSQRSRAVLSVF*IFSMSM Trigger: CATCGACATGCTGAAGATGCAGAAGACGGACAAGAC...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTCTCTTTGTTAAGGGCTaGATCCATGGGTACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPLFVKG*IHGYRQ Trigger: TTGCCTGTACCCATGGATGCAGCCCTTAACAAAGAG...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGGTCCATAGCAGCTTCTaGGTCCAGGTCATCAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQVHSSF*VQVINV Trigger: CACATTGATGACCTGGACGCAGAAGCTGCTATGGAC...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCTGGGTGCTGAAGTCTTaGGTGGGGTCCGTTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLERCIKPHPHTHTGKSWVLKS*VGSVGA Trigger: TGCCCCAACGGACCCCACCCAAGACTTCAGCACCCA...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTAACTTCCTTTTGTTCTaGTACCTGCTCCCCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPNFLLF*YLLPIT Trigger: GGTGATGGGGAGCAGGTACCAGAACAAAAGGAAGTT...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAAACCAGTTCTGGCAGTaGCACTTTCTCCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRNQFWQ*HFLLFS Trigger: GCTGAAGAGGAGAAAGTGCCACTGCCAGAACTGGTT...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGACACATCCAGCTTCTTaGGCACCCAGTCTAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQTHPAS*APSLSQ Trigger: TTGGCTTAGACTGGGTGCCCAAGAAGCTGGATGTGT...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGATATCGAGCTCCTCTaGCATCTCAATGGACACATC | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPDIELL*HLNGHI Trigger: GATGTGTCCATTGAGATGCCAGAGGAGCTCGATATC...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGACCCTGGAGAAGCCCATaGAGACTATGGTGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ISLRASSAPPQGSKHLRGPWRSP*RLWWSH Trigger: GTGTGACCACCATAGTCTCCATGGGCTTCTCCAGGG...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCCTTGAGTGGCACGCCTaGCTCCTGGATCAACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLERCIKPHPHTHTGKSLEWHA*LLDQLP Trigger: TGGGAGTTGATCCAGGAGTCAGGCGTGCCACTCAAG...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGATCCACATACTTCCTCTaGAAGTCAGGGATGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRSTYFL*KSGMLK Trigger: CTTCAGCATCCCTGACTTTCAGAGGAAGTATGTGGA...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAATGAAGGCAAAGAGCTaGTACTTTCCAGGACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRMKAKS*YFPGPS Trigger: GGATGGTCCTGGAAAGTATCAGCTCTTTGCCTTCAT...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGGGTTGTTGCCCCCACTaGCATCGAAGTAGCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPESNEYPSSLFGHSPMGCCPH*HRSSAV Trigger: GACGGCGCTACTTCGATGGCAGTGGGGGCAACAACC...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCGTGAGACAAGTGCTCTaGCAGGCTGGGGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPLERCIKPHPHTHTGKSVRQVL*QAGVQN Trigger: GTTCTGGACCCCAGCCTGGCAGAGCACTTGTCTCAC...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGTCTTGTCCGTCTTCTaGATCTTCAGCATGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQVRARPTSGVGPSQRSRVLSVF*IFSMSM Trigger: CATCGACATGCTGAAGATGCAGAAGACGGACAAGAC...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGCTCTTTGTTAAGGGCTaGATCCATGGGTACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQLFVKG*IHGYRQ Trigger: TTGCCTGTACCCATGGATGCAGCCCTTAACAAAGAG...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTCAGGATGAGGGGGTTTaGAAAATCTGGATCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EATRSHCGQAVGPSCPIPQDEGV*KIWIIH Trigger: ATGGATGATCCAGATTTTGCAAACCCCCTCATCCTG...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGGCGCACTCGTCTTTATaGACCCGGTCTCCCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPESNEYPSSLFGHSPMAHSSL*TRSPAL Trigger: CAAGGCGGGAGACCGGGTCCATAAAGACGAGTGCGC...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCCATTCACCAATCCGCTaGTTCATGTCTATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGHSPIR*FMSISS Trigger: GCTGGAGATAGACATGAACCAGCGGATTGGTGAATG...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCGGCCCGAACCAGTTCTaGCAGTGGCACTTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPLERCIKPHPHTHTGKSGPNQF*QWHFLL Trigger: GAGGAGAAAGTGCCACTGCCAGAACTGGTTCGGGCC...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCCCATGGAGACTATGGTaGTCACACAGTCCTCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPLERCIKPHPHTHTGKSPWRLW*SHSPPA Trigger: CGCCGGAGGACTGTGTGACCACCATAGTCTCCATGG...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTTCCAGGTCATCAATGTaGCTGAAGATCCAGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCSRSSM*LKIQST Trigger: TGTAGACTGGATCTTCAGCCACATTGATGACCTGGA...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCATCCAGGTCATCAATGTaGCTGAAGATCCAGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: QVRARPTSGVGPSQRSRASRSSM*LKIQST Trigger: TGTAGACTGGATCTTCAGCCACATTGATGACCTGGA...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTGACTTTAGGTCCCACTaGCACAGACTCGGAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGDFRSH*HRLGDG Trigger: TCCATCTCCGAGTCTGTGCCAGTGGGACCTAAAGTC...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTGCTGGCCTGTCTTGTTaGAGTGTCTCTCCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGAGLSC*SVSPHT Trigger: AGTATGTGGAGAGACACTTCAACAAGACAGGCCAGC...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGGTGAGACAAGTGCTCTaGCAGGCTGGGGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPESNEYPSSLFGHSPMVRQVL*QAGVQN Trigger: GTTCTGGACCCCAGCCTGGCAGAGCACTTGTCTCAC...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTACATTCGAGGGGCAATaGCATCTTGAACTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGKEATRSHCGQAVGPSCTFEGQ*HLELPF Trigger: AAAAGGAAGTTCAAGATGGCATTGCCCCTCGAATGT...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCAACATTCGAGGGGCAATaGCATCTTGAACTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVRARPTSGVGPSQRSRATFEGQ*HLELPF Trigger: AAAAGGAAGTTCAAGATGGCATTGCCCCTCGAATGT...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCTTCTCCTCTTCAGCTTaGCGCTTCTTCTCTTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGFSSSA*RFFSSY Trigger: GTATGAAGAGAAGAAGCGGCAAGCTGAAGAGGAGAA...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTCTCCTCTTCAGCTTaGCGCTTCTTCTCTTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQFSSSA*RFFSSY Trigger: GTATGAAGAGAAGAAGCGGCAAGCTGAAGAGGAGAA...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTCTTCGTCTTCGTTaGCATAGAAACCAAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGSLRLR*HRNQGY Trigger: GTAGCCTTGGTTTCTATGGCAACGAAGACGAAGACT...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047510.10 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTGTCCATAGCAGCTTCTaGGTCCAGGTCATCAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGVHSSF*VQVINV Trigger: CACATTGATGACCTGGACGCAGAAGCTGCTATGGAC...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | TGTATTTTGGCATTTTTCCAGAGGACCATAAAGACAGACCGGAGGCTGAGGCAGTGGGTGCTGAAGTCTTaGGTGGGGTCCGTTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CILAFFQRTIKTDRRLRQWVLKS*VGSVGA Trigger: TGCCCCAACGGACCCCACCCAAGACTTCAGCACCCA...CTGCCTCAGCCTCCGGTCTGTCTTTATGGTCCTCTGGAAAAATGCCAAAATACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTAACCAGTTCTGGCAGTaGCACTTTCTCCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGNQFWQ*HFLLFS Trigger: GCTGAAGAGGAGAAAGTGCCACTGCCAGAACTGGTT...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTACACATCCAGCTTCTTaGGCACCCAGTCTAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGTHPAS*APSLSQ Trigger: TTGGCTTAGACTGGGTGCCCAAGAAGCTGGATGTGT...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGACCTCTGGCATCTCAATaGACACATCCAGCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLRASSAPPQGSKHLRGPLASQ*THPASW Trigger: CCAAGAAGCTGGATGTGTCCATTGAGATGCCAGAGG...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGCCTGGACCACGGAGTTaGGATAGCAGCTGTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPESNEYPSSLFGHSPMPGPRS*DSSCYP Trigger: TGGGTAACAGCTGCTATCTCAACTCCGTGGTCCAGG...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | TGTATTTTGGCATTTTTCCAGAGGACCATAAAGACAGACCGGAGGCTGAGGCAGGAAAGTCAGGGATGCTaGAGAGCACCTGGACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CILAFFQRTIKTDRRLRQESQGC*RAPGPR Trigger: CCGTGGTCCAGGTGCTCTTCAGCATCCCTGACTTTC...CTGCCTCAGCCTCCGGTCTGTCTTTATGGTCCTCTGGAAAAATGCCAAAATACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | TGTATTTTGGCATTTTTCCAGAGGACCATAAAGACAGACCGGAGGCTGAGGCAGCTGCTCCCCATCACCTaGCTCCAGTGCTGGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CILAFFQRTIKTDRRLRQLLPIT*LQCWLR Trigger: TCTAAGCCAGCACTGGAGTCAGGTGATGGGGAGCAG...CTGCCTCAGCCTCCGGTCTGTCTTTATGGTCCTCTGGAAAAATGCCAAAATACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTCCAGGAATGTGTTCATaGAGATATAGAGGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGPGMCS*RYRGHP Trigger: AGGGTGGCCTCTATATCTGCATGAACACATTCCTGG...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGCCACAGCATGGTTGTTaGCCCCACTGCCATCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPESNEYPSSLFGHSPMPQHGC*PHCHRS Trigger: ACTTCGATGGCAGTGGGGGCAACAACCATGCTGTGG...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | TGTATTTTGGCATTTTTCCAGAGGACCATAAAGACAGACCGGAGGCTGAGGCAGTCCCCATCCCAAGCCTaGACCTCCTGCTTTCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CILAFFQRTIKTDRRLRQSPSQA*TSCFRE Trigger: CTCTCGAAAGCAGGAGGTCCAGGCTTGGGATGGGGA...CTGCCTCAGCCTCCGGTCTGTCTTTATGGTCCTCTGGAAAAATGCCAAAATACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTCATTCACCAATCCGCTaGTTCATGTCTATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGHSPIR*FMSISS Trigger: GCTGGAGATAGACATGAACCAGCGGATTGGTGAATG...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCTCCGTTGGGGCATTCTaGAAGATCTTCTCCAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LWIQGAGEGSNKVPLWTGSVGAF*KIFSNL Trigger: TAAATTGGAGAAGATCTTCCAGAATGCCCCAACGGA...GCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTCCGTTGGGGCATTCTaGAAGATCTTCTCCAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQSVGAF*KIFSNL Trigger: TAAATTGGAGAAGATCTTCCAGAATGCCCCAACGGA...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGTAGGAAGAATTCCTaGGCATCCTGCTGCCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGCRKNS*ASCCRL Trigger: TAATCGGCAGCAGGATGCCCAGGAATTCTTCCTACA...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCCAAACTTGTCCTCGGTaGGGTCAAACCCTCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPLERCIKPHPHTHTGKSQTCPR*GQTLLQ Trigger: TTGAAGGAGGGTTTGACCTCACCGAGGACAAGTTTG...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTTCTTCAGCATGTCGATaGCAAAGTGAGACAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGSSACR*QSETSA Trigger: AGCACTTGTCTCACTTTGGCATCGACATGCTGAAGA...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGACAGGATGAGGGGGTTTaGAAAATCTGGATCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISLRASSAPPQGSKHLRGQDEGV*KIWIIH Trigger: ATGGATGATCCAGATTTTGCAAACCCCCTCATCCTG...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGGACTTTAGGTCCCACTaGCACAGACTCGGAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPESNEYPSSLFGHSPMDFRSH*HRLGDG Trigger: TCCATCTCCGAGTCTGTGCCAGTGGGACCTAAAGTC...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCGGGGCAATGCCATCTTaGACTTCCTTTTGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLERCIKPHPHTHTGKSGAMPS*TSFCSG Trigger: ACCAGAACAAAAGGAAGTTCAAGATGGCATTGCCCC...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | TGTATTTTGGCATTTTTCCAGAGGACCATAAAGACAGACCGGAGGCTGAGGCAGGCAGGGTTGTCCAACTaGTTGAGGTTGAAGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: CILAFFQRTIKTDRRLRQAGLSN*LRLKAC Trigger: GCATGCCTTCAACCTCAAGCAGTTGGACAACCCTGC...CTGCCTCAGCCTCCGGTCTGTCTTTATGGTCCTCTGGAAAAATGCCAAAATACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | TGTATTTTGGCATTTTTCCAGAGGACCATAAAGACAGACCGGAGGCTGAGGCAGGCTGGCCTGTCTTGTTaGAGTGTCTCTCCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: CILAFFQRTIKTDRRLRQAGLSC*SVSPHT Trigger: AGTATGTGGAGAGACACTTCAACAAGACAGGCCAGC...CTGCCTCAGCCTCCGGTCTGTCTTTATGGTCCTCTGGAAAAATGCCAAAATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR TCA 90 bp | TGTATTTTGGCATTTTTCCAGAGGACCATAAAGACAGACCGGAGGCTGAGGCAGGTACAGGCAACTGCATaGTGTAGTCAACTCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CILAFFQRTIKTDRRLRQVQATA*CSQLAE Trigger: CTCAGCGAGTTGACTACATCATGCAGTTGCCTGTAC...CTGCCTCAGCCTCCGGTCTGTCTTTATGGTCCTCTGGAAAAATGCCAAAATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGCCAGGAATGTGTTCATaGAGATATAGAGGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPESNEYPSSLFGHSPMPGMCS*RYRGHP Trigger: AGGGTGGCCTCTATATCTGCATGAACACATTCCTGG...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR GCA 90 bp | TGTATTTTGGCATTTTTCCAGAGGACCATAAAGACAGACCGGAGGCTGAGGCAGTCTTCAGCATGTCGATaGCAAAGTGAGACAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CILAFFQRTIKTDRRLRQSSACR*QSETSA Trigger: AGCACTTGTCTCACTTTGGCATCGACATGCTGAAGA...CTGCCTCAGCCTCCGGTCTGTCTTTATGGTCCTCTGGAAAAATGCCAAAATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS GCA 90 bp | AATGGCCAGCCGGGTGGGCTTCTTCCGAGGTGGGTCTCCAGTGCCTaGACTGGTGTCCTCTTCTTTCGGTCGCCGGGTCCTCCGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NGQPGGLLPRWVSSA*TGVLFFRSPGPPEV Trigger: CACCTCCGGAGGACCCGGCGACCGAAAGAAGAGGACACCAGTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCCACCCGGCTGGCCATT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS GCA 90 bp | CACCAATGGCCAGCCGGGTGGGCTTCTTCCGAGGTGGGTCTCCAGTaGCTGCACTGGTGTCCTCTTCTTTCGGTCGCCGGGTCCTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: HQWPAGWASSEVGLQ*LHWCPLLSVAGSSG Trigger: TCCGGAGGACCCGGCGACCGAAAGAAGAGGACACCAGTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCCACCCGGCTGGCCATTGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS-3UTR CAA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCCTGGGTGCTGAAGTCTaGGGTGGGGTCCGTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCLGAEV*GGVRWG Trigger: GCCCCAACGGACCCCACCCAAGACTTCAGCACCCAG...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CCA 90 bp | CCCTCCTTCAACACCAATGGCCAGCCGGGTGGGCTTCTTCCGAGGTaGGTCTCCAGTGCCTGCACTGGTGTCCTCTTCTTTCGGTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSFNTNGQPGGLLPR*VSSACTGVLFFRSP Trigger: CGGCGACCGAAAGAAGAGGACACCAGTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCCACCCGGCTGGCCATTGGTGTTGAAGGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAACCCGGTCTCCCGCCTaGGGGACACGGATCGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TQVRARPTSGVGPSQRSRTRSPA*GTRIVG Trigger: ACCGACGATCCGTGTCCCCAAGGCGGGAGACCGGGT...TCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCGAGCCGTCTGTCAGGTaGAGCCACAGGTTCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCEPSVR*SHRFSR Trigger: GCGCGAGAACCTGTGGCTCAACCTGACAGACGGCTC...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS GCA 90 bp | GTGGGGCAATGTCAGGCAGCTCCTCCTCTCCCGGCTGTAGCCCTGTaGCCCTCAGCTGGGAGATATCGAGCTCCTCTGGCATCTCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: VGQCQAAPPLPAVAL*PSAGRYRAPLASQW Trigger: CCATTGAGATGCCAGAGGAGCTCGATATCTCCCAGCTGAGGGGCACAGGGCTACAGCCGGGAGAGGAGGAGCTGCCTGACATTGCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCTCGCGCATGTCGCACTaGGAGCACTTCCAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCSRMSH*EHFQPQ Trigger: CTGTGGCTGGAAGTGCTCCAAGTGCGACATGCGCGA...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCAGAGCCGTCTGTCAGGTaGAGCCACAGGTTCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QVRARPTSGVGPSQRSRAEPSVR*SHRFSR Trigger: GCGCGAGAACCTGTGGCTCAACCTGACAGACGGCTC...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTGGCCCAAACAGAGGCTaGAGTGGCACGCCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGKEATRSHCGQAVGPSCGPNRG*SGTPDS Trigger: GGAGTCAGGCGTGCCACTCAAGCCTCTGTTTGGGCC...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTACCCGGTCTCCCGCCTaGGGGACACGGATCGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGTRSPA*GTRIVG Trigger: ACCGACGATCCGTGTCCCCAAGGCGGGAGACCGGGT...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | AGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTGCGGGATCCGAGCAGGGTaGTCCAACTGCTTGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SNKVPLWTGSWPLLSHPCGIRAG*SNCLRL Trigger: CAACCTCAAGCAGTTGGACAACCCTGCTCGGATCCC...GCAGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTTGCTCCACAGCATGGTaGTTGCCCCCACTGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: QGKEATRSHCGQAVGPSCCSTAW*LPPLPS Trigger: CGATGGCAGTGGGGGCAACAACCATGCTGTGGAGCA...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGAACTCAGGGTGGCCCTaGCCAATGAGGGCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLNSGWP*PMRALN Trigger: GTTCAAGGCCCTCATTGGCAAGGGCCACCCTGAGTT...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS TCA 90 bp | CTTCGTTGCCATAGAAACCAAGGCTACCTTTGGGCTCATCCGGAGTaGCCAGGGGTGGGGCAATGTCAGGCAGCTCCTCCTCTCCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRCHRNQGYLWAHPE*PGVGQCQAAPPLPA Trigger: AGCCGGGAGAGGAGGAGCTGCCTGACATTGCCCCACCCCTGGTCACTCCGGATGAGCCCAAAGGTAGCCTTGGTTTCTATGGCAACGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047510.10 |
||
| CDS GCA 90 bp | AGCCAGTCTCCCTGTAGTGCTCCACAGCATGGTTGTTGCCCCCACTaGCATCGAAGTAGCGCCGTCCACAGAGGATGGAGCCGTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSPCSAPQHGCCPH*HRSSAVHRGWSRLS Trigger: TGACAGACGGCTCCATCCTCTGTGGACGGCGCTACTTCGATGGCAGTGGGGGCAACAACCATGCTGTGGAGCACTACAGGGAGACTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS GCA 90 bp | CTAAGGGGTAGCCAGTCTCCCTGTAGTGCTCCACAGCATGGTTGTTaGCCCCACTGCCATCGAAGTAGCGCCGTCCACAGAGGATGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRGSQSPCSAPQHGC*PHCHRSSAVHRGWS Trigger: GCTCCATCCTCTGTGGACGGCGCTACTTCGATGGCAGTGGGGGCAACAACCATGCTGTGGAGCACTACAGGGAGACTGGCTACCCCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS CCA 90 bp | CCCTCAGACTCCGGCGTGTCGAAAGAGAAAGCGCACTCGTCTTTATaGACCCGGTCTCCCGCCTTGGGGACACGGATCGTCGGTAACACT | + |
|
Preference number: 5 (lower is better) Translates to: PSDSGVSKEKAHSSL*TRSPALGTRIVGNT Trigger: AGTGTTACCGACGATCCGTGTCCCCAAGGCGGGAGACCGGGTCCATAAAGACGAGTGCGCTTTCTCTTTCGACACGCCGGAGTCTGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS CCA 90 bp | CTAAGCTATTGTTCGTGGCCCGCAGAGCTTTCAGGGCCTGGTCCCTaGAGAAGCCCATGGAGACTATGGTGGTCACACAGTCCTCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSYCSWPAELSGPGP*RSPWRLWWSHSPPA Trigger: CGCCGGAGGACTGTGTGACCACCATAGTCTCCATGGGCTTCTCCAGGGACCAGGCCCTGAAAGCTCTGCGGGCCACGAACAATAGCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CCA 90 bp | GCCCGCTCTAAGCTATTGTTCGTGGCCCGCAGAGCTTTCAGGGCCTaGTCCCTGGAGAAGCCCATGGAGACTATGGTGGTCACACAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSKLLFVARRAFRA*SLEKPMETMVVTQS Trigger: GGACTGTGTGACCACCATAGTCTCCATGGGCTTCTCCAGGGACCAGGCCCTGAAAGCTCTGCGGGCCACGAACAATAGCTTAGAGCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCAGGGATCCGAGCAGGGTaGTCCAACTGCTTGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVRARPTSGVGPSQRSRAGIRAG*SNCLRL Trigger: CAACCTCAAGCAGTTGGACAACCCTGCTCGGATCCC...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTTCCACAGCATGGTTGTaGCCCCCACTGCCATCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EATRSHCGQAVGPSCPIPSTAWL*PPLPSK Trigger: CTTCGATGGCAGTGGGGGCAACAACCATGCTGTGGA...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTGCTCCACAGCATGGTaGTTGCCCCCACTGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQCSTAW*LPPLPS Trigger: CGATGGCAGTGGGGGCAACAACCATGCTGTGGAGCA...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGGACACATCCAGCTTCTaGGGCACCCAGTCTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLDTSSF*GTQSKP Trigger: TGGCTTAGACTGGGTGCCCAAGAAGCTGGATGTGTC...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGAGGCCCAAACAGAGGCTaGAGTGGCACGCCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISLRASSAPPQGSKHLRGGPNRG*SGTPDS Trigger: GGAGTCAGGCGTGCCACTCAAGCCTCTGTTTGGGCC...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGAACTCAGGGTGGCCCTaGCCAATGAGGGCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQNSGWP*PMRALN Trigger: GTTCAAGGCCCTCATTGGCAAGGGCCACCCTGAGTT...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTAAACCAAGGCTACCTTaGGGCTCATCCGGAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QGKEATRSHCGQAVGPSCKPRLP*GSSGVT Trigger: GGTCACTCCGGATGAGCCCAAAGGTAGCCTTGGTTT...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047510.10 |
||
| CDS TCA 90 bp | GCCGGGTCCTCCGGAGGTGCAGGTAGACACGCTGGCCTGTCTTGTTaGAGTGTCTCTCCACATACTGCTTCCCGAATCCCAGGAATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGSSGGAGRHAGLSC*SVSPHTASRIPGMC Trigger: ACACATTCCTGGGATTCGGGAAGCAGTATGTGGAGAGACACTTCAACAAGACAGGCCAGCGTGTCTACCTGCACCTCCGGAGGACCCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS TCA 90 bp | GCAGGGTTGTCCAACTGCTTGAGGTTGAAGGCATGCTTGGACACCTaGCGGACTTCCCCATCCCAAGCCTGGACCTCCCGATCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: AGLSNCLRLKACLDT*RTSPSQAWTSRSLT Trigger: TGTCAGAGATCGGGAGGTCCAGGCTTGGGATGGGGAAGTCCGTCAGGTGTCCAAGCATGCCTTCAACCTCAAGCAGTTGGACAACCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142058.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTCCCATCCCTTCCAACTGCTTGAGGTaGAAGGCATGCTTGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: EATRSHCGQAVGPSCPIPSNCLR*KACLDT Trigger: GGTGTCCAAGCATGCCTTCAACCTCAAGCAGTTGGA...AGGGATGGGACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGGACACATCCAGCTTCTaGGGCACCCAGTCTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQDTSSF*GTQSKP Trigger: TGGCTTAGACTGGGTGCCCAAGAAGCTGGATGTGTC...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTTCCAGCATGGGTGCTTaGGGCTCATCCGGAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGSSMGA*GSSGVT Trigger: GGTCACTCCGGATGAGCCCAAAGCACCCATGCTGGA...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGCTGGGTGCTGAAGTCTaGGGTGGGGTCCGTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSPESNEYPSSLFGHSPMLGAEV*GGVRWG Trigger: GCCCCAACGGACCCCACCCAAGACTTCAGCACCCAG...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGCCAATGAGGGCCTaGAACATTCGAGGGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQLPMRA*NIRGAM Trigger: CATTGCCCCTCGAATGTTCAAGGCCCTCATTGGCAA...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCAAGCGGAACACTTCATTaGGATTTTCAGAACTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QVRARPTSGVGPSQRSRASGTLH*DFQNSG Trigger: GCCGGAGTTCTGAAAATCCAAATGAAGTGTTCCGCT...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTTTCTCCTCTTCAGCTaGCCGCTTCTTCTCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: AGEGSNKVPLWTGSWPLLFLLFS*PLLLFI Trigger: TATGAAGAGAAGAAGCGGCAAGCTGAAGAGGAGAAA...CAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS TCA 90 bp | GCCCATTTCCACCAACTGTATGATGACGGATTCGTCCAGCATGGGTaGTGTCGGAGAGGAGAAGTGAGGGGAGCAGAAGGAGTCTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: AHFHQLYDDGFVQHG*CRRGEVRGAEGVFV Trigger: GACGAAGACTCCTTCTGCTCCCCTCACTTCTCCTCTCCGACATCACCCATGCTGGACGAATCCGTCATCATACAGTTGGTGGAAATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047510.10 |
||
| CDS-3UTR CAA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGACGCTGGCCTGTCTTGTaGAAGTGTCTCTCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: ISLRASSAPPQGSKHLRGRWPVL*KCLSTY Trigger: GTATGTGGAGAGACACTTCAACAAGACAGGCCAGCG...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGAGGGTTGTCCAACTGCTaGAGGTTGAAGGCATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISLRASSAPPQGSKHLRGGLSNC*RLKACL Trigger: CAAGCATGCCTTCAACCTCAAGCAGTTGGACAACCC...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCTCCACAGCATGGTTGTaGCCCCCACTGCCATCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PPLERCIKPHPHTHTGKSSTAWL*PPLPSK Trigger: CTTCGATGGCAGTGGGGGCAACAACCATGCTGTGGA...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCCCTCAGAGCCTCCTCTGCCCCACCACAAGGGAGCAAACACTTAAGGGGATTGCCAATGAGGGCCTaGAACATTCGAGGGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ISLRASSAPPQGSKHLRGLPMRA*NIRGAM Trigger: CATTGCCCCTCGAATGTTCAAGGCCCTCATTGGCAA...TCCCCTTAAGTGTTTGCTCCCTTGTGGTGGGGCAGAGGAGGCTCTGAGGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCATCTGTGGCCAGGCATTaGATCTTTTCTTCCACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QVRARPTSGVGPSQRSRASVARH*IFSSTK Trigger: TTTGGTGGAAGAAAAGATCAAATGCCTGGCCACAGA...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTTCTAAAAGCTCCTCTTaGTTAAGGGCTGCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QGKEATRSHCGQAVGPSCSKSSS*LRAASM Trigger: CATGGATGCAGCCCTTAACAAAGAGGAGCTTTTAGA...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTAAGAGCCCGCCCCACATCAGGGGTTGGGCCATCACAGAGAAGCAGAGCATTTCTCCTCTTCAGCTaGCCGCTTCTTCTCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: QVRARPTSGVGPSQRSRAFLLFS*PLLLFI Trigger: TATGAAGAGAAGAAGCGGCAAGCTGAAGAGGAGAAA...TGCTCTGCTTCTCTGTGATGGCCCAACCCCTGATGTGGGGCGGGCTCTTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CCA 90 bp | AGTGGCACGCCTGACTCCTGGATCAACTCCCATTCACCAATCCGCTaGTTCATGTCTATCTCCAGCTCAGTCATCGTCTTGTCCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGTPDSWINSHSPIR*FMSISSSVIVLSVF Trigger: GAAGACGGACAAGACGATGACTGAGCTGGAGATAGACATGAACCAGCGGATTGGTGAATGGGAGTTGATCCAGGAGTCAGGCGTGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTCTGTGGCCAGGCATTaGATCTTTTCTTCCACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQSVARH*IFSSTK Trigger: TTTGGTGGAAGAAAAGATCAAATGCCTGGCCACAGA...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS GCA 90 bp | AGTGTCTCTCCACATACTGCTTCCCGAATCCCAGGAATGTGTTCATaGAGATATAGAGGCCACCCTCAGACTCCGGCGTGTCGAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVSPHTASRIPGMCS*RYRGHPQTPACRKR Trigger: TCTCTTTCGACACGCCGGAGTCTGAGGGTGGCCTCTATATCTGCATGAACACATTCCTGGGATTCGGGAAGCAGTATGTGGAGAGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS CCA 90 bp | TCTTCAGCATGTCGATGCCAAAGTGAGACAAGTGCTCTGCCAGGCTaGGGTCCAGAACCATGTCATCCTCGTCGTAAGAATACACGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSACRCQSETSALPG*GPEPCHPRRKNTRQ Trigger: CTGACGTGTATTCTTACGACGAGGATGACATGGTTCTGGACCCCAGCCTGGCAGAGCACTTGTCTCACTTTGGCATCGACATGCTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCCGCTGGCCTGTCTTGTaGAAGTGTCTCTCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: PPLERCIKPHPHTHTGKSRWPVL*KCLSTY Trigger: GTATGTGGAGAGACACTTCAACAAGACAGGCCAGCG...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCCACATCCACACACACACACAGGTAAGAGCCCGCCCCACATCAGGGGTATCTTGAACTTCCTTTaGTTCTGGTACCTGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IKPHPHTHTGKSPPHIRGILNFL*FWYLLP Trigger: GGGGAGCAGGTACCAGAACAAAAGGAAGTTCAAGAT...ACCCCTGATGTGGGGCGGGCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTGGCCCCTCCTGTTTCCTCTCCACCATGTaGATAAGATGTAGGAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QGKEATRSHCGQAVGPSCFLSTM*IRCRKN Trigger: ATTCTTCCTACATCTTATCAACATGGTGGAGAGGAA...ACAGGAGGGGCCAACTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS GCA 90 bp | CTTCTGCATCTTCAGCATGTCGATGCCAAAGTGAGACAAGTGCTCTaGCAGGCTGGGGTCCAGAACCATGTCATCCTCGTCGTAAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LLHLQHVDAKVRQVL*QAGVQNHVILVVRI Trigger: TATTCTTACGACGAGGATGACATGGTTCTGGACCCCAGCCTGGCAGAGCACTTGTCTCACTTTGGCATCGACATGCTGAAGATGCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATTCAAGGGGCAGGGGAAGGAAGCAACAAGGTCCCACTGTGGACAGGCAGTTCCTCTCCACCATGTaGATAAGATGTAGGAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VDSRGRGRKQQGPTVDRQFLSTM*IRCRKN Trigger: ATTCTTCCTACATCTTATCAACATGGTGGAGAGGAA...CTGCCTGTCCACAGTGGGACCTTGTTGCTTCCTTCCCCTGCCCCTTGAATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS GCA 90 bp | TGGGCCCGAACCAGTTCTGGCAGTGGCACTTTCTCCTCTTCAGCTTaGCGCTTCTTCTCTTCATACTCTAAAAGCTCCTCTTTGTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WARTSSGSGTFSSSA*RFFSSYSKSSSLLR Trigger: CCTTAACAAAGAGGAGCTTTTAGAGTATGAAGAGAAGAAGCGGCAAGCTGAAGAGGAGAAAGTGCCACTGCCAGAACTGGTTCGGGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCAGCGGAACACTTCATTaGGATTTTCAGAACTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPLERCIKPHPHTHTGKSSGTLH*DFQNSG Trigger: GCCGGAGTTCTGAAAATCCAAATGAAGTGTTCCGCT...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCAGAGTCTAATGAGTACCCCTCCTCTTTGTTTGGCCATTCTCCTATGATCTTGAACTTCCTTTaGTTCTGGTACCTGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSPESNEYPSSLFGHSPMILNFL*FWYLLP Trigger: GGGGAGCAGGTACCAGAACAAAAGGAAGTTCAAGAT...CATAGGAGAATGGCCAAACAAAGAGGAGGGGTACTCATTAGACTCTGGGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCCCTGGAAAGATGCATAAAGCCACATCCACACACACACACAGGTAAGAGCTCTAAAAGCTCCTCTTaGTTAAGGGCTGCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PPLERCIKPHPHTHTGKSSKSSS*LRAASM Trigger: CATGGATGCAGCCCTTAACAAAGAGGAGCTTTTAGA...GCTCTTACCTGTGTGTGTGTGTGGATGTGGCTTTATGCATCTTTCCAGGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS GCA 72 bp | CCAGCCGGGTGGGCTTCTTCCGAGGTGGGTCTCCAGTaGCTGCACTGGTGTCCTCTTCTTTCGGTCGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAGWASSEVGLQ*LHWCPLLSVAG Trigger: CCCGGCGACCGAAAGAAGAGGACACCAGTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCCACCCGGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS GCA 72 bp | CCGGGTGGGCTTCTTCCGAGGTGGGTCTCCAGTGCCTaGACTGGTGTCCTCTTCTTTCGGTCGCCGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGGLLPRWVSSA*TGVLFFRSPGP Trigger: AGGACCCGGCGACCGAAAGAAGAGGACACCAGTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCCACCCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS CCA 72 bp | TGGGCTTCTTCCGAGGTGGGTCTCCAGTGCCTGCACTaGTGTCCTCTTCTTTCGGTCGCCGGGTCCTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: WASSEVGLQCLH*CPLLSVAGSSG Trigger: TCCGGAGGACCCGGCGACCGAAAGAAGAGGACACCAGTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS CCA 72 bp | GCAGAGCTTTCAGGGCCTGGTCCCTGGAGAAGCCCATaGAGACTATGGTGGTCACACAGTCCTCCGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AELSGPGPWRSP*RLWWSHSPPAG Trigger: CCCCGCCGGAGGACTGTGTGACCACCATAGTCTCCATGGGCTTCTCCAGGGACCAGGCCCTGAAAGCTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CCA 72 bp | GGTCAAACCCTCCTTCAACACCAATGGCCAGCCGGGTaGGCTTCTTCCGAGGTGGGTCTCCAGTGCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GQTLLQHQWPAG*ASSEVGLQCLH Trigger: GTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCCACCCGGCTGGCCATTGGTGTTGAAGGAGGGTTTGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS TCA 72 bp | ATTCGTCCAGCATGGGTGCTTTGGGCTCATCCGGAGTaGCCAGGGGTGGGGCAATGTCAGGCAGCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IRPAWVLWAHPE*PGVGQCQAAPP Trigger: AGGAGGAGCTGCCTGACATTGCCCCACCCCTGGTCACTCCGGATGAGCCCAAAGCACCCATGCTGGACGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122110.8 |
||
| CDS GCA 72 bp | CCCTGTAGTGCTCCACAGCATGGTTGTTGCCCCCACTaGCATCGAAGTAGCGCCGTCCACAGAGGATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PCSAPQHGCCPH*HRSSAVHRGWS Trigger: GCTCCATCCTCTGTGGACGGCGCTACTTCGATGGCAGTGGGGGCAACAACCATGCTGTGGAGCACTACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS CCA 72 bp | AAGCGCACTCGTCTTTATGGACCCGGTCTCCCGCCTTaGGGACACGGATCGTCGGTAACACTGACAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: KRTRLYGPGLPP*GHGSSVTLTAA Trigger: CGCTGCTGTCAGTGTTACCGACGATCCGTGTCCCCAAGGCGGGAGACCGGGTCCATAAAGACGAGTGCGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS CCA 72 bp | TCCGGCGTGTCGAAAGAGAAAGCGCACTCGTCTTTATaGACCCGGTCTCCCGCCTTGGGGACACGGATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGVSKEKAHSSL*TRSPALGTRIV Trigger: GACGATCCGTGTCCCCAAGGCGGGAGACCGGGTCCATAAAGACGAGTGCGCTTTCTCTTTCGACACGCCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS CAA 72 bp | GTCAGGTTGAGCCACAGGTTCTCGCGCATGTCGCACTaGGAGCACTTCCAGCCACAGGGAGGGATCCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VRLSHRFSRMSH*EHFQPQGGIRA Trigger: TGCTCGGATCCCTCCCTGTGGCTGGAAGTGCTCCAAGTGCGACATGCGCGAGAACCTGTGGCTCAACCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS GCA 72 bp | AGCCAGTCTCCCTGTAGTGCTCCACAGCATGGTTGTTaGCCCCACTGCCATCGAAGTAGCGCCGTCCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SQSPCSAPQHGC*PHCHRSSAVHR Trigger: TCTGTGGACGGCGCTACTTCGATGGCAGTGGGGGCAACAACCATGCTGTGGAGCACTACAGGGAGACTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS CCA 72 bp | AACACCAATGGCCAGCCGGGTGGGCTTCTTCCGAGGTaGGTCTCCAGTGCCTGCACTGGTGTCCTCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NTNGQPGGLLPR*VSSACTGVLFF Trigger: AAAGAAGAGGACACCAGTGCAGGCACTGGAGACCCACCTCGGAAGAAGCCCACCCGGCTGGCCATTGGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS CCA 72 bp | GCTGAAGGGCACCTGGGCCCGAACCAGTTCTGGCAGTaGCACTTTCTCCTCTTCAGCTTGCCGCTTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AEGHLGPNQFWQ*HFLLFSLPLLL Trigger: GAGAAGAAGCGGCAAGCTGAAGAGGAGAAAGTGCCACTGCCAGAACTGGTTCGGGCCCAGGTGCCCTTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CAA 72 bp | AAAGCGCACTCGTCTTTATGGACCCGGTCTCCCGCCTaGGGGACACGGATCGTCGGTAACACTGACAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KAHSSLWTRSPA*GTRIVGNTDSS Trigger: GCTGCTGTCAGTGTTACCGACGATCCGTGTCCCCAAGGCGGGAGACCGGGTCCATAAAGACGAGTGCGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS CAA 90 bp | TCGAAAGAGAAAGCGCACTCGTCTTTATGGACCCGGTCTCCCGCCTaGGGGACACGGATCGTCGGTAACACTGACAGCAGCGCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SKEKAHSSLWTRSPA*GTRIVGNTDSSASS Trigger: TGAAGAGGCGCTGCTGTCAGTGTTACCGACGATCCGTGTCCCCAAGGCGGGAGACCGGGTCCATAAAGACGAGTGCGCTTTCTCTTTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS TCA 72 bp | CATAGAAACCAAGGCTACCTTTGGGCTCATCCGGAGTaGCCAGGGGTGGGGCAATGTCAGGCAGCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HRNQGYLWAHPE*PGVGQCQAAPP Trigger: AGGAGGAGCTGCCTGACATTGCCCCACCCCTGGTCACTCCGGATGAGCCCAAAGGTAGCCTTGGTTTCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047510.10 |
||
| CDS TCA 72 bp | TCCAACTGCTTGAGGTTGAAGGCATGCTTGGACACCTaGCGGACTTCCCCATCCCAAGCCTGGACCTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SNCLRLKACLDT*RTSPSQAWTSR Trigger: TCGGGAGGTCCAGGCTTGGGATGGGGAAGTCCGTCAGGTGTCCAAGCATGCCTTCAACCTCAAGCAGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142058.8 |
||
| CDS CCA 72 bp | TGGGCATCCTGCTGCCGATTAGTGGAGAACTCAGGGTaGCCCTTGCCAATGAGGGCCTTGAACATTCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WASCCRLVENSG*PLPMRALNIRG Trigger: CCCTCGAATGTTCAAGGCCCTCATTGGCAAGGGCCACCCTGAGTTCTCCACTAATCGGCAGCAGGATGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CCA 72 bp | CCCTGTGCCCCTCAGCTGGGAGATATCGAGCTCCTCTaGCATCTCAATGGACACATCCAGCTTCTTGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PCAPQLGDIELL*HLNGHIQLLGH Trigger: GTGCCCAAGAAGCTGGATGTGTCCATTGAGATGCCAGAGGAGCTCGATATCTCCCAGCTGAGGGGCACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CCA 72 bp | AAGCTATTGTTCGTGGCCCGCAGAGCTTTCAGGGCCTaGTCCCTGGAGAAGCCCATGGAGACTATGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KLLFVARRAFRA*SLEKPMETMVV Trigger: GACCACCATAGTCTCCATGGGCTTCTCCAGGGACCAGGCCCTGAAAGCTCTGCGGGCCACGAACAATAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CCA 72 bp | GGCCCAAACAGAGGCTTGAGTGGCACGCCTGACTCCTaGATCAACTCCCATTCACCAATCCGCTGGTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GPNRGLSGTPDS*INSHSPIRWFM Trigger: CATGAACCAGCGGATTGGTGAATGGGAGTTGATCCAGGAGTCAGGCGTGCCACTCAAGCCTCTGTTTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CAA 72 bp | TCCTGCTGCCGATTAGTGGAGAACTCAGGGTGGCCCTaGCCAATGAGGGCCTTGAACATTCGAGGGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SCCRLVENSGWP*PMRALNIRGAM Trigger: CATTGCCCCTCGAATGTTCAAGGCCCTCATTGGCAAGGGCCACCCTGAGTTCTCCACTAATCGGCAGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS TCA 72 bp | TCCGGAGGTGCAGGTAGACACGCTGGCCTGTCTTGTTaGAGTGTCTCTCCACATACTGCTTCCCGAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGGAGRHAGLSC*SVSPHTASRIP Trigger: TGGGATTCGGGAAGCAGTATGTGGAGAGACACTTCAACAAGACAGGCCAGCGTGTCTACCTGCACCTCCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS GCA 72 bp | CTTCAGCATGTCGATGCCAAAGTGAGACAAGTGCTCTaGCAGGCTGGGGTCCAGAACCATGTCATCCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQHVDAKVRQVL*QAGVQNHVILV Trigger: GACGAGGATGACATGGTTCTGGACCCCAGCCTGGCAGAGCACTTGTCTCACTTTGGCATCGACATGCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS CCA 72 bp | GGCCACCTGGGTGCTGAAGTCTTGGGTGGGGTCCGTTaGGGCATTCTGGAAGATCTTCTCCAATTTATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GHLGAEVLGGVR*GILEDLLQFIH Trigger: GTGGATAAATTGGAGAAGATCTTCCAGAATGCCCCAACGGACCCCACCCAAGACTTCAGCACCCAGGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS TCA 72 bp | CACCAACTGTATGATGACGGATTCGTCCAGCATGGGTaGTGTCGGAGAGGAGAAGTGAGGGGAGCAGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HQLYDDGFVQHG*CRRGEVRGAEG Trigger: TCCTTCTGCTCCCCTCACTTCTCCTCTCCGACATCACCCATGCTGGACGAATCCGTCATCATACAGTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047510.10 |
||
| CDS CCA 72 bp | TGTCGATGCCAAAGTGAGACAAGTGCTCTGCCAGGCTaGGGTCCAGAACCATGTCATCCTCGTCGTAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CRCQSETSALPG*GPEPCHPRRKN Trigger: ATTCTTACGACGAGGATGACATGGTTCTGGACCCCAGCCTGGCAGAGCACTTGTCTCACTTTGGCATCGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS CCA 72 bp | CCTGACTCCTGGATCAACTCCCATTCACCAATCCGCTaGTTCATGTCTATCTCCAGCTCAGTCATCGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PDSWINSHSPIR*FMSISSSVIVL Trigger: CAAGACGATGACTGAGCTGGAGATAGACATGAACCAGCGGATTGGTGAATGGGAGTTGATCCAGGAGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS CCA 72 bp | ATGTCCATAGCAGCTTCTGCGTCCAGGTCATCAATGTaGCTGAAGATCCAGTCTACAGCCCGCTCTAAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: MSIAASASRSSM*LKIQSTARSKL Trigger: TAGCTTAGAGCGGGCTGTAGACTGGATCTTCAGCCACATTGATGACCTGGACGCAGAAGCTGCTATGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS TCA 72 bp | TCTTCACATCCTCGTCAAATTCAAACTTGTCCTCGGTaGGGTCAAACCCTCCTTCAACACCAATGGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSHPRQIQTCPR*GQTLLQHQWPA Trigger: GGCTGGCCATTGGTGTTGAAGGAGGGTTTGACCTCACCGAGGACAAGTTTGAATTTGACGAGGATGTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||
| CDS TCA 72 bp | AACTTCCTTTTGTTCTGGTACCTGCTCCCCATCACCTaGCTCCAGTGCTGGCTTAGAGTATTCTCCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NFLLFWYLLPIT*LQCWLRVFSRE Trigger: CTCTCTGGAGAATACTCTAAGCCAGCACTGGAGTCAGGTGATGGGGAGCAGGTACCAGAACAAAAGGAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS GCA 72 bp | CGCTGGCCTGTCTTGTTGAAGTGTCTCTCCACATACTaGTTCCCGAATCCCAGGAATGTGTTCATGCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: RWPVLLKCLSTY*FPNPRNVFMQI Trigger: TATCTGCATGAACACATTCCTGGGATTCGGGAAGCAGTATGTGGAGAGACACTTCAACAAGACAGGCCAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 |
||
| CDS GCA 72 bp | ACCAGTTCTGGCAGTGGCACTTTCTCCTCTTCAGCTTaGCGCTTCTTCTCTTCATACTCTAAAAGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSGSGTFSSSA*RFFSSYSKSSS Trigger: AGAGGAGCTTTTAGAGTATGAAGAGAAGAAGCGGCAAGCTGAAGAGGAGAAAGTGCCACTGCCAGAACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 |
||
| CDS CAA 72 bp | AAAATGACAATCTTCACATCCTCGTCAAATTCAAACTaGTCCTCGGTGAGGTCAAACCCTCCTTCAACACCA | + |
|
Preference number: 6 (lower is better) Translates to: KMTIFTSSSNSN*SSVRSNPPSTP Trigger: TGGTGTTGAAGGAGGGTTTGACCTCACCGAGGACAAGTTTGAATTTGACGAGGATGTGAAGATTGTCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047510.10 ENSMUST00000122110.8 ENSMUST00000142058.8 ENSMUST00000153306.2 |
||