Pregenerated sensors for USP48 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043411Ensembl transcript IDs: ENSMUST00000055131.13, ENSMUST00000105837.2, ENSMUST00000105838.8, ENSMUST00000105839.8, ENSMUST00000105840.8, ENSMUST00000128065.2, ENSMUST00000131755.2, ENSMUST00000141426.8, ENSMUST00000141628.8, ENSMUST00000151807.8, ENSMUST00000153100.8, ENSMUST00000153869.2, ENSMUST00000157012.3
Found 454 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTaGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: GAGPGPRHSTGNLSQ*PHACNPSTWEEEVG Trigger: TCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR GCA 90 bp | GCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATaGCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCAGA | + |
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Preference number: 1 (lower is better) Translates to: ARASAQHRKPVTVAT*LQSQHLGGGSRKIR Trigger: TCTGATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR GCA 90 bp | GGTAGAGCTGGGGATGTGGGTCAGTATGCAGAATTTTCTCTAGTGTaGACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAAACCT | + |
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Preference number: 1 (lower is better) Translates to: GRAGDVGQYAEFSLV*TRRWARASAQHRKP Trigger: AGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAATTCTGCATACTGACCCACATCCCCAGCTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR TCA 90 bp | GTGAGGCTTGGTCCCATTTCTGTGGTGCTCGGTAAAGGACAGATCTaGAAGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAAAGGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: VRLGPISVVLGKGQI*KPGSRESLCPQRQE Trigger: CTCCTGCCTTTGGGGACACAGGGACTCACGGGACCCTGGCTTTCAGATCTGTCCTTTACCGAGCACCACAGAAATGGGACCAAGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR TCA 90 bp | GTGAGGTCCGAGGAAGGCAGAACTGGAGAGCGGGAGGGCTGTCTATaGAAACCCGTGCTATCCTACGGAGCTCCGGTTCGGCTTTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: VRSEEGRTGEREGCL*KPVLSYGAPVRLFK Trigger: TTTGAAAAGCCGAACCGGAGCTCCGTAGGATAGCACGGGTTTTCATAGACAGCCCTCCCGCTCTCCAGTTCTGCCTTCCTCGGACCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR GCA 90 bp | AGGAAGGCAGAACTGGAGAGCGGGAGGGCTGTCTATGAAAACCCGTaGTATCCTACGGAGCTCCGGTTCGGCTTTTCAAACGTTCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: RKAELESGRAVYENP*YPTELRFGFSNVQG Trigger: TCCCTGAACGTTTGAAAAGCCGAACCGGAGCTCCGTAGGATAGCACGGGTTTTCATAGACAGCCCTCCCGCTCTCCAGTTCTGCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR TCA 90 bp | AACAGCTGCTTCTTGCCACCTAGCCCCACCACCTTTCAGGGGTGCTaGGGCCCTGCCAATGCTTTGTTACAAAGCCACAAACTCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: NSCFLPPSPTTFQGC*GPANALLQSHKLWV Trigger: AACCCAGAGTTTGTGGCTTTGTAACAAAGCATTGGCAGGGCCTCAGCACCCCTGAAAGGTGGTGGGGCTAGGTGGCAAGAAGCAGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR GCA 90 bp | AGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCTaGCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCA | + |
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Preference number: 1 (lower is better) Translates to: RSQSSRKVGVQLSWL*PALLTISEHSFFIA Trigger: TGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR TCA 90 bp | GGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGTaGGTGAGGCTTGGTCCCATTTCTGTGGTGCTCGGTAAAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: GDFQMSWPWERVGSW*VRLGPISVVLGKGQ Trigger: CTGTCCTTTACCGAGCACCACAGAAATGGGACCAAGCCTCACTCACCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR GCA 90 bp | CACTCCCTCAGTGTAAACATGATTCACTCCTACTCTTGCTCTGCCTaGTCAGTCCTCGCTCGCCCTCTCCCTCCCACCTTAAATAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: HSLSVNMIHSYSCSA*SVLARPLPPTLNRK Trigger: TTTTCTATTTAAGGTGGGAGGGAGAGGGCGAGCGAGGACTGAGCAGGCAGAGCAAGAGTAGGAGTGAATCATGTTTACACTGAGGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR CCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTaGGAGGAGGAAGTAGGAAGATCAGAAGTTAAGGTTATCCTGGTT | + |
|
Preference number: 1 (lower is better) Translates to: TGNLSQWPHACNPST*EEEVGRSEVKVILV Trigger: AACCAGGATAACCTTAACTTCTGATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR TCA 90 bp | ACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGTGAGTaGGGCTTGGTCCCATTTCTGTGGTGCTCGGTAAAGGACAGATCT | + |
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Preference number: 1 (lower is better) Translates to: TFKCLGLGKEWALGE*GLVPFLWCSVKDRS Trigger: AGATCTGTCCTTTACCGAGCACCACAGAAATGGGACCAAGCCTCACTCACCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR TCA 90 bp | AGAGAGGAAAATGGGGATGAGAAGGAAGATAAGGACTCGTGGGCTTaGGTTGTACTTGACGACTGTACTGGAGCGACAGTCCTGTACCAC | + |
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Preference number: 1 (lower is better) Translates to: REENGDEKEDKDSWA*VVLDDCTGATVLYH Trigger: GTGGTACAGGACTGTCGCTCCAGTACAGTCGTCAAGTACAACTCAAGCCCACGAGTCCTTATCTTCCTTCTCATCCCCATTTTCCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131755.2 |
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| 3UTR CCA 90 bp | TACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTaGGAAAGAAAAAGGAAACATAAAGAAGCCTGGAGATTCATAATC | + |
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Preference number: 1 (lower is better) Translates to: YIVSPRPAWVTGNPA*ERKRKHKEAWRFII Trigger: GATTATGAATCTCCAGGCTTCTTTATGTTTCCTTTTTCTTTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR TCA 90 bp | GGGTTTCTTTCTAAGGACAGTAAAGACCATTTGTCAAATATCTGGTaGCTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: GFLSKDSKDHLSNIW*LSNVLALGKSGLLV Trigger: CACCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTGACAAATGGTCTTTACTGTCCTTAGAAAGAAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR GCA 90 bp | GCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATaGCATGTTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGA | + |
|
Preference number: 1 (lower is better) Translates to: ASHHLRTLFLHCKHK*HVGSSTQQQKATKR Trigger: TCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAACATGGCATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR TCA 90 bp | ACACGTCCTTCAAGTCTGATGCCCATCAGTGCAATCTGCTTTATTTaGCATAAGGCAAGTGGGACAGTCTCTTTTGAATGGATTTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: TRPSSLMPISAICFI*HKASGTVSFEWIFV Trigger: GACAAAAATCCATTCAAAAGAGACTGTCCCACTTGCCTTATGTCAAATAAAGCAGATTGCACTGATGGGCATCAGACTTGAAGGACGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR CCA 90 bp | TGGGAAAGAAAAAGGAAACATAAAGAAGCCTGGAGATTCATAATCTaGTTTAATGTGGTTCCTGAATGTAGCTTTAGAACCCAGCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: WERKRKHKEAWRFII*FNVVPECSFRTQQN Trigger: ATTCTGCTGGGTTCTAAAGCTACATTCAGGAACCACATTAAACCAGATTATGAATCTCCAGGCTTCTTTATGTTTCCTTTTTCTTTCCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCAGAGGTGGCAGGGCTGTaGCTGCCCTGCAGGCGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GPGLGTAQETCHSGHMPAEVAGL*LPCRRG Trigger: ACCACGCCTGCAGGGCAGCCACAGCCCTGCCACCTC...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCAGGCATCTGTGTGGACTaGCCAGGGCTTCACTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GPGLGTAQETCHSGHMPAGICVD*PGLHSL Trigger: GAGGGAGTGAAGCCCTGGTCAGTCCACACAGATGCC...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCAGAGTGGGCTCTTGGTaGGTGAGGCTTGGTCCCATT | + |
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Preference number: 2 (lower is better) Translates to: GPGPRHSTGNLSQWPHACRVGSW*VRLGPI Trigger: AATGGGACCAAGCCTCACTCACCAAGAGCCCACTCT...GCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTTCTTGCCACCTAGCCCCACCACCTTTCAGGGGTGCTGAGGCCCTGCCAGGTAAAGGACAGATCTaGAAGCCAGGGTCCCGTGAG | + |
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Preference number: 2 (lower is better) Translates to: AASCHLAPPPFRGAEALPGKGQI*KPGSRE Trigger: CTCACGGGACCCTGGCTTTCAGATCTGTCCTTTACC...TGGCAGGGCCTCAGCACCCCTGAAAGGTGGTGGGGCTAGGTGGCAAGAAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAAGGCGGGCACCGGCTGTaGGGCGGAAGCAGCACACTT | + |
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Preference number: 2 (lower is better) Translates to: GYIVSPRPAWVTGNPAWEGGHRL*GGSSTL Trigger: AAGTGTGCTGCTTCCGCCTCACAGCCGGTGCCCGCC...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR CAA 90 bp | AGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAAAGGCAGGAGCTCCTaGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SQGPVSPCVPKGRSS*RSQSSRKVGVQLSW Trigger: CCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGACTCACGGGACCCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTGGGCTGTGGCTGCCCTaGAGGCGTGGTGCTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SLCPQRQELLEKSVFQEGGLWLP*RRGALK Trigger: CTTCAGAGCACCACGCCTGCAGGGCAGCCACAGCCC...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAAGGGCTGTGGCTGCCCTaGAGGCGTGGTGCTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GYIVSPRPAWVTGNPAWEGLWLP*RRGALK Trigger: CTTCAGAGCACCACGCCTGCAGGGCAGCCACAGCCC...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCGACTTTCAAATGTCTTaGCCTTGGGAAAGAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GPGPRHSTGNLSQWPHACDFQMS*PWERVG Trigger: GCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTC...GCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCACCTATCCCTCTGAGATaGTGGAGGAAAACTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: GPGLGTAQETCHSGHMPAPIPLR*WRKTET Trigger: TGTCTCAGTTTTCCTCCATCATCTCAGAGGGATAGG...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGCTGTGAGGAAGCCGCAGCCCAGGGATCCCAAGCTTTTCGGGAGTGGCCTGGTAAAGGACAGATCTaGAAGCCAGGGTCCCGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSCEEAAAQGSQAFREWPGKGQI*KPGSRE Trigger: CTCACGGGACCCTGGCTTTCAGATCTGTCCTTTACC...AGGCCACTCCCGAAAAGCTTGGGATCCCTGGGCTGCGGCTTCCTCACAGCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGCTCCTACTCTTGCTCTaGCTGCTCAGTCCTCGCTCG | + |
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Preference number: 2 (lower is better) Translates to: TGNLSQWPHACNPSTWEELLLLL*LLSPRS Trigger: CGAGCGAGGACTGAGCAGGCAGAGCAAGAGTAGGAG...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCGGTTACAGGAAACCCTaGCTGGGAAAGAAAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GPGPRHSTGNLSQWPHACGYRKP*LGKKKE Trigger: TTCCTTTTTCTTTCCCAGGCAGGGTTTCCTGTAACC...GCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCAAGACACGTTCCTCGTTaGCAAGTCCTTCACGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: GPGLGTAQETCHSGHMPARHVPR*QVLHVH Trigger: ATGAACGTGAAGGACTTGCCAACGAGGAACGTGTCT...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR CAA 90 bp | CCTGTTCCCTCAGGGCCAGCAGCAGTGTTCCTCATCTACTCAGTGTaGCCTGTCTTGTACACACAGCTGTCACTGCAGGAGGAGCCCCGT | + |
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Preference number: 2 (lower is better) Translates to: PVPSGPAAVFLIYSV*PVLYTQLSLQEEPR Trigger: ACGGGGCTCCTCCTGCAGTGACAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTGCTGCTGGCCCTGAGGGAACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
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| 3UTR CAA 90 bp | CCTCCAGGGAGCACAGTGACACTCCCAGGCTGGAGAGTTTTCTATTaGGGAAAGAGGCACCTGTTCCCTCAGGGCCAGCAGCAGTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: PPGSTVTLPGWRVFY*GKRHLFPQGQQQCS Trigger: GGAACACTGCTGCTGGCCCTGAGGGAACAGGTGCCTCTTTCCCAAATAGAAAACTCTCCAGCCTGGGAGTGTCACTGTGCTCCCTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAACTGCCCCACTGTATTTaGCTGACAGGAGTTAATGGC | + |
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Preference number: 2 (lower is better) Translates to: IFSSVHEALGPGLGTAQELPHCI*LTGVNG Trigger: GCCATTAACTCCTGTCAGGCAAATACAGTGGGGCAG...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR CAA 90 bp | ACCAGGGCTTCACTCCCTCAGTGTAAACATGATTCACTCCTACTCTaGCTCTGCCTGCTCAGTCCTCGCTCGCCCTCTCCCTCCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: TRASLPQCKHDSLLL*LCLLSPRSPSPSHL Trigger: AAGGTGGGAGGGAGAGGGCGAGCGAGGACTGAGCAGGCAGAGCAAGAGTAGGAGTGAATCATGTTTACACTGAGGGAGTGAAGCCCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGAAGGCAGGAGCTCCTTaGGAAGTCAGTCTTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TGNLSQWPHACNPSTWEEKAGAP*EVSLPG Trigger: TCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTT...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCAGAGTGGGCTCTTGGTaGGTGAGGCTTGGTCCCATT | + |
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Preference number: 2 (lower is better) Translates to: TVATCLQSQHLGGGSRKIRVGSW*VRLGPI Trigger: AATGGGACCAAGCCTCACTCACCAAGAGCCCACTCT...GATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAACCTACTACTCAGCACTaGCAGACAGTGAGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GYIVSPRPAWVTGNPAWEPTTQH*QTVSRE Trigger: CTCCCTGCTCACTGTCTGTCAGTGCTGAGTAGTAGG...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTATTTGGGAAAGAGGCACCTGTTCCCTCAGGGCCAGCAGCAGTGTTCCTCACACACAGCTGTCACTaGAGGAGGAGCCCCGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: FLFGKEAPVPSGPAAVFLTHSCH*RRSPVQ Trigger: CTGAACGGGGCTCCTCCTGCAGTGACAGCTGTGTGT...GAGGAACACTGCTGCTGGCCCTGAGGGAACAGGTGCCTCTTTCCCAAATAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGTTGGTGAGTGAGGCTTaGTCCCATTTCTGTGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: TGNLSQWPHACNPSTWEELVSEA*SHFCGA Trigger: AGCACCACAGAAATGGGACCAAGCCTCACTCACCAA...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATGAGGTGGCAGGGCTGTaGCTGCCCTGCAGGCGTGGT | + |
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Preference number: 2 (lower is better) Translates to: CPALLTISEHSFFIANINEVAGL*LPCRRG Trigger: ACCACGCCTGCAGGGCAGCCACAGCCCTGCCACCTC...ATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCCAAATGTCTTGGCCTTaGGAAAGAGTGGGCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: TVATCLQSQHLGGGSRKIQMSWP*ERVGSW Trigger: CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTG...GATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCTGTGAGGAAGCCGCAGCCCAGGGATCCCAAGCTTTTCGGGAGTGGCCTATCTGTATCAGCAACTaGGCCACAAACATACCAACA | + |
|
Preference number: 2 (lower is better) Translates to: SSCEEAAAQGSQAFREWPICISN*ATNIPT Trigger: TGTTGGTATGTTTGTGGCCCAGTTGCTGATACAGAT...AGGCCACTCCCGAAAAGCTTGGGATCCCTGGGCTGCGGCTTCCTCACAGCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCATGGAGATTCATAATCTaGTTTAATGTGGTTCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GPGLGTAQETCHSGHMPAWRFII*FNVVPE Trigger: TTCAGGAACCACATTAAACCAGATTATGAATCTCCA...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR TCA 90 bp | CCATGTTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGCCTACTACTCAGCACTaGCAGACAGTGAGCAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: PCWEFYPAAESYQKMLPMPTTQH*QTVSRE Trigger: CTCCCTGCTCACTGTCTGTCAGTGCTGAGTAGTAGG...CATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAATTGGTCCCATTTCTGTaGTGCTCGGTAAAGGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: GYIVSPRPAWVTGNPAWELVPFL*CSVKDR Trigger: TCTGTCCTTTACCGAGCACCACAGAAATGGGACCAA...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGCATTGCAAACATAAATaGCATGTTGGGAGTTCTACC | + |
|
Preference number: 2 (lower is better) Translates to: TGNLSQWPHACNPSTWEEHCKHK*HVGSST Trigger: GGTAGAACTCCCAACATGGCATTTATGTTTGCAATG...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCAAAGGAAACAAAGGATaGCTATGCAACCAACCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: TVATCLQSQHLGGGSRKIKGNKG*LCNQPH Trigger: GTGAGGTTGGTTGCATAGGCATCCTTTGTTTCCTTT...GATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGATGCTGCCAATGTTaGGATCAGCATGTATACATC | + |
|
Preference number: 2 (lower is better) Translates to: SLCPQRQELLEKSVFQEGRCCQC*DQHVYI Trigger: GATGTATACATGCTGATCTCAACATTGGCAGCATCT...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAAAGATGCTGCCAATGTTaGGATCAGCATGTATACATC | + |
|
Preference number: 2 (lower is better) Translates to: GYIVSPRPAWVTGNPAWERCCQC*DQHVYI Trigger: GATGTATACATGCTGATCTCAACATTGGCAGCATCT...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTAACATTTCGTAAAGGAAACAAAGGATGCCTATGCAACCAACCTCACAGTCAGCTCTCCTGGCTCTaGCCCGCGCTTCTCACCATC | + |
|
Preference number: 2 (lower is better) Translates to: LLTFRKGNKGCLCNQPHSQLSWL*PALLTI Trigger: GATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTG...ACTGTGAGGTTGGTTGCATAGGCATCCTTTGTTTCCTTTACGAAATGTTAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGCGGTCACTTGGAGTTTaGAGCAGGATGCTAGCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LGVLPSSRKLPKDAANVERSLGV*SRMLAH Trigger: ATGGGCTAGCATCCTGCTCCAAACTCCAAGTGACCG...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCATCTGTATCAGCAACTaGGCCACAAACATACCAACA | + |
|
Preference number: 2 (lower is better) Translates to: SSLRSQSSRKVGVQLSWLICISN*ATNIPT Trigger: TGTTGGTATGTTTGTGGCCCAGTTGCTGATACAGAT...GAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGCACGTCCTTCAAGTCTaGTGCCCATCAGTGCAATCT | + |
|
Preference number: 2 (lower is better) Translates to: LGVLPSSRKLPKDAANVEHVLQV*CPSVQS Trigger: AGATTGCACTGATGGGCATCAGACTTGAAGGACGTG...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGATTCACTCCTACTCTTaGTCTGCCTGCTCAGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LGVLPSSRKLPKDAANVEIHSYS*SACSVL Trigger: GAGGACTGAGCAGGCAGAGCAAGAGTAGGAGTGAAT...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTCATTGCAAACATAAATaGCATGTTGGGAGTTCTACC | + |
|
Preference number: 2 (lower is better) Translates to: SLCPQRQELLEKSVFQEGHCKHK*HVGSST Trigger: GGTAGAACTCCCAACATGGCATTTATGTTTGCAATG...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAAAGGTTAAATAAAGGCTaGGTTAGCAGATCTTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GYIVSPRPAWVTGNPAWERLNKG*VSRSCL Trigger: GAGACAAGATCTGCTAACCCAGCCTTTATTTAACCT...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTAACATTTCGTAAAGGAAACAAAGGATGCCTATGCAACCAACCTCACAGTCGAGGAAGGCAGAACTaGAGAGCGGGAGGGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LLTFRKGNKGCLCNQPHSRGRQN*RAGGLS Trigger: AGACAGCCCTCCCGCTCTCCAGTTCTGCCTTCCTCG...ACTGTGAGGTTGGTTGCATAGGCATCCTTTGTTTCCTTTACGAAATGTTAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGTTTCGTCTTCCTTTCTaGTCACTCCTTGGCAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LGVLPSSRKLPKDAANVEFRLPF*SLLGSQ Trigger: CTGACTGCCAAGGAGTGACCAGAAAGGAAGACGAAA...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATCCTATCCCTCTGAGATaGTGGAGGAAAACTGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: CPALLTISEHSFFIANINPIPLR*WRKTET Trigger: TGTCTCAGTTTTCCTCCATCATCTCAGAGGGATAGG...ATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATTTTCGTCTTCCTTTCTaGTCACTCCTTGGCAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: CPALLTISEHSFFIANINFRLPF*SLLGSQ Trigger: CTGACTGCCAAGGAGTGACCAGAAAGGAAGACGAAA...ATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CAA 90 bp | ACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATGCCATGTaGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: TISEHSFFIANINAM*GVLPSSRKLPKDAA Trigger: GGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAACATGGCATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTAACATTTCGTAAAGGAAACAAAGGATGCCTATGCAACCAACCTCACAGTCACGTCCTTCAAGTCTaGTGCCCATCAGTGCAATCT | + |
|
Preference number: 2 (lower is better) Translates to: LLTFRKGNKGCLCNQPHSHVLQV*CPSVQS Trigger: AGATTGCACTGATGGGCATCAGACTTGAAGGACGTG...ACTGTGAGGTTGGTTGCATAGGCATCCTTTGTTTCCTTTACGAAATGTTAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTAACATTTCGTAAAGGAAACAAAGGATGCCTATGCAACCAACCTCACAGTATTCACTCCTACTCTTaGTCTGCCTGCTCAGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLTFRKGNKGCLCNQPHSIHSYS*SACSVL Trigger: GAGGACTGAGCAGGCAGAGCAAGAGTAGGAGTGAAT...ACTGTGAGGTTGGTTGCATAGGCATCCTTTGTTTCCTTTACGAAATGTTAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATGTTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTGGATTTTTGTCTTTTaGAAGAGCCAGGTAAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PCWEFYPAAESYQKMLPMWIFVF*KSQVRV Trigger: AACTCTTACCTGGCTCTTCCAAAAGACAAAAATCCA...CATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAACATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CCA 72 bp | CCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTaGCCACATGCCTGCAATCCCAGCACCTGGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PGPRHSTGNLSQ*PHACNPSTWEE Trigger: CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | GAGGAAGGCAGAACTGGAGAGCGGGAGGGCTGTCTATaGAAACCCGTGCTATCCTACGGAGCTCCGGTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: EEGRTGEREGCL*KPVLSYGAPVR Trigger: CCGAACCGGAGCTCCGTAGGATAGCACGGGTTTTCATAGACAGCCCTCCCGCTCTCCAGTTCTGCCTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR GCA 72 bp | TCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATaGCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SAQHRKPVTVAT*LQSQHLGGGSR Trigger: CCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCACGGTCACTTGGAGTTaGGAGCAGGATGCTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TVATCLQSQHLGGGSRKITVTWS*EQDASP Trigger: TGGGCTAGCATCCTGCTCCAAACTCCAAGTGACCGT...GATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | GGTCCCATTTCTGTGGTGCTCGGTAAAGGACAGATCTaGAAGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GPISVVLGKGQI*KPGSRESLCPQ Trigger: TTGGGGACACAGGGACTCACGGGACCCTGGCTTTCAGATCTGTCCTTTACCGAGCACCACAGAAATGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR GCA 72 bp | CCTCAGTGTAAACATGATTCACTCCTACTCTTGCTCTaGCTGCTCAGTCCTCGCTCGCCCTCTCCCTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PQCKHDSLLLLL*LLSPRSPSPSH Trigger: GTGGGAGGGAGAGGGCGAGCGAGGACTGAGCAGGCAGAGCAAGAGTAGGAGTGAATCATGTTTACACTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTGATTCACTCCTACTCTaGCTCTGCCTGCTCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CAALLALPRASHHLRTLFDSLLL*LCLLSP Trigger: AGGACTGAGCAGGCAGAGCAAGAGTAGGAGTGAATC...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | TGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGTGAGTaGGGCTTGGTCCCATTTCTGTGGTGCTCGGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CLGLGKEWALGE*GLVPFLWCSVK Trigger: CTTTACCGAGCACCACAGAAATGGGACCAAGCCTCACTCACCAAGAGCCCACTCTTTCCCAAGGCCAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | CAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGTaGGTGAGGCTTGGTCCCATTTCTGTGGTGCTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: QMSWPWERVGSW*VRLGPISVVLG Trigger: ACCGAGCACCACAGAAATGGGACCAAGCCTCACTCACCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | TTCTTGCCACCTAGCCCCACCACCTTTCAGGGGTGCTaGGGCCCTGCCAATGCTTTGTTACAAAGCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: FLPPSPTTFQGC*GPANALLQSHK Trigger: TTTGTGGCTTTGTAACAAAGCATTGGCAGGGCCTCAGCACCCCTGAAAGGTGGTGGGGCTAGGTGGCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR GCA 72 bp | CCTCACAGTGCTAACTTCTGGCTTGTGCACAGCCAATaGCAAGAGAAAGGGGGAGGAACAGCTGCTTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PHSANFWLVHSQ*QEKGGGTAASC Trigger: GCAAGAAGCAGCTGTTCCTCCCCCTTTCTCTTGGCATTGGCTGTGCACAAGCCAGAAGTTAGCACTGTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAACCAAATGCAGACTCTTaGAAATATGTCTGCTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IFSSVHEALGPGLGTAQEPNADS*KYVCFK Trigger: CTTGAAGCAGACATATTTCAAAGAGTCTGCATTTGG...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CCA 72 bp | TTAGCAGATCTTGTCTCTAGACGGTCACTTGGAGTTTaGAGCAGGATGCTAGCCCATGTCCTGGGACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LADLVSRRSLGV*SRMLAHVLGHR Trigger: TCTGTGTCCCAGGACATGGGCTAGCATCCTGCTCCAAACTCCAAGTGACCGTCTAGAGACAAGATCTGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CCA 72 bp | GGTTATCCTGGTTACATAGTGAGTCCAAGGCCAGCCTaGGTTACAGGAAACCCTGCCTGGGAAAGAAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GYPGYIVSPRPA*VTGNPAWERKR Trigger: CCTTTTTCTTTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACCAGGATAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGGATTCACTCCTACTCTaGCTCTGCCTGCTCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGVLPSSRKLPKDAANVEDSLLL*LCLLSP Trigger: AGGACTGAGCAGGCAGAGCAAGAGTAGGAGTGAATC...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | AATGCAGACTCTTTGAAATATGTCTGCTTCAAGCTGTaGGGAAGCCGCAGCCCAGGGATCCCAAGCTTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: NADSLKYVCFKL*GSRSPGIPSFS Trigger: CGAAAAGCTTGGGATCCCTGGGCTGCGGCTTCCTCACAGCTTGAAGCAGACATATTTCAAAGAGTCTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | AATGGGGATGAGAAGGAAGATAAGGACTCGTGGGCTTaGGTTGTACTTGACGACTGTACTGGAGCGACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: NGDEKEDKDSWA*VVLDDCTGATV Trigger: GACTGTCGCTCCAGTACAGTCGTCAAGTACAACTCAAGCCCACGAGTCCTTATCTTCCTTCTCATCCCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131755.2 |
||
| 3UTR GCA 72 bp | TTCAGCTCGCTGGAACTGGGTCTGCCCCACTGTATTTaGCTGACAGGAGTTAATGGCTATTACCTTGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FSSLELGLPHCI*LTGVNGYYLAN Trigger: GTTAGCAAGGTAATAGCCATTAACTCCTGTCAGGCAAATACAGTGGGGCAGACCCAGTTCCAGCGAGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAAATGGATTTTTGTCTTTaGGAAGAGCCAGGTAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GYIVSPRPAWVTGNPAWEMDFCL*EEPGKS Trigger: ACTCTTACCTGGCTCTTCCAAAAGACAAAAATCCAT...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | TTGCTGCCACCGAACACTGAACATTTCCTATCCCTCTaGGATGATGGAGGAAAACTGAGACAGTCACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLPPNTEHFLSL*DDGGKLRQSLA Trigger: AGCCAGTGACTGTCTCAGTTTTCCTCCATCATCTCAGAGGGATAGGAAATGTTCAGTGTTCGGTGGCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATGGATTTTTGTCTTTaGGAAGAGCCAGGTAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: WLCPALLTISEHSFFIANMDFCL*EEPGKS Trigger: ACTCTTACCTGGCTCTTCCAAAAGACAAAAATCCAT...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | GGACTCAACAAGTGGCTGAGGCTGACTAAGAACTTGTaGCTCTCCTGCCTATGCTTCAGTGTGCATCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GLNKWLRLTKNL*LSCLCFSVHLL Trigger: TAAAAGATGCACACTGAAGCATAGGCAGGAGAGTCACAAGTTCTTAGTCAGCCTCAGCCACTTGTTGAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131755.2 |
||
| 3UTR GCA 72 bp | CGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTaGAAACATAAATGCCATGTTGGGAGTTCTACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RASHHLRTLFLH*KHKCHVGSSTQ Trigger: CTGGGTAGAACTCCCAACATGGCATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGACGGTCACTTGGAGTTaGGAGCAGGATGCTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLHVHALLKDEYRLNKGWTVTWS*EQDASP Trigger: TGGGCTAGCATCCTGCTCCAAACTCCAAGTGACCGT...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR GCA 72 bp | TTAGTGAGCAGGAACATGGCAGCTGGTAAGTCCAAATaGAGACTCTTTGAAATATGTCTGCTTCAAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVSRNMAAGKSK*RLFEICLLQAV Trigger: CACAGCTTGAAGCAGACATATTTCAAAGAGTCTGCATTTGGACTTACCAGCTGCCATGTTCCTGCTCACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CCA 72 bp | AACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTaGCAGTCAGCGAGTAGTCAAAGATTAATGTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: NMSISSSFLVTP*QSASSQRLMSE Trigger: CTCGGACATTAATCTTTGACTACTCGCTGACTGCCAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157012.3 |
||
| 3UTR GCA 72 bp | CATCTCAGAACACTCTTTCTTCATTGCAAACATAAATaGCATGTTGGGAGTTCTACCCAGCAGCAGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLRTLFLHCKHK*HVGSSTQQQKA Trigger: AGCTTTCTGCTGCTGGGTAGAACTCCCAACATGGCATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR TCA 72 bp | ATAGGAGACTCTACACATTTGCTTGGGTTTAAAGAATaGCTAGAAATATACACGGGTAGAGCTGGGGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: IGDSTHLLGFKE*LEIYTGRAGDV Trigger: CACATCCCCAGCTCTACCCGTGTATATTTCTAGTCATTCTTTAAACCCAAGCAAATGTGTAGAGTCTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATGTGGGACAGTCTCTTTaGAATGGATTTTTGTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CPALLTISEHSFFIANINVGQSL*NGFLSF Trigger: AAAAGACAAAAATCCATTCAAAAGAGACTGTCCCAC...ATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAAGTCTCGATGTGCTCCTaGGACACCTCCTCGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IFSSVHEALGPGLGTAQEVSMCS*DTSSGR Trigger: GCGGCCCGAGGAGGTGTCGCAGGAGCACATCGAGAC...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCGCTGCAAGTTCAGAGTaGAAGGGAGGCTCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGPRHSTGNLSQWPHACAASSE*KGGSEA Trigger: GGCTTCTGAGCCTCCCTTGCACTCTGAACTTGCAGC...GCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCTTGCCACCTAGCCCCACCACCTTTCAGGGGTGCTGAGGCCCTGCCAAAGGCTCCAGCCAGATaGGGTAGGCGGTCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AASCHLAPPPFRGAEALPKAPAR*GRRSRC Trigger: ACATCGAGACCGCCTACCGCATCTGGCTGGAGCCTT...TGGCAGGGCCTCAGCACCCCTGAAAGGTGGTGGGGCTAGGTGGCAAGAAGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCAGCTGCAAGTTCAGAGTaGAAGGGAGGCTCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGLGTAQETCHSGHMPAAASSE*KGGSEA Trigger: GGCTTCTGAGCCTCCCTTGCACTCTGAACTTGCAGC...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCTTTGGGAAGTACTGCTaGAGCTTGCTCCAAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGPRHSTGNLSQWPHACFGKYC*SLLQAS Trigger: GGAGGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAA...GCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCAGGCAGACACCAACAGTaGCTTCTCTCCCCGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPGLGTAQETCHSGHMPAGRHQQ*LLSPNL Trigger: AAGGTTCGGGGAGAGAAGGCACTGTTGGTGTCTGCC...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTGTCTCGATGTGCTCCTaGGACACCTCCTCGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CAALLALPRASHHLRTLFVSMCS*DTSSGR Trigger: GCGGCCCGAGGAGGTGTCGCAGGAGCACATCGAGAC...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAACGAAGGTCCCTCTGCTaGTGGCACAGCAGACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IFSSVHEALGPGLGTAQERRSLC*WHSRPS Trigger: AGAAGGTCTGCTGTGCCAGCAGCAGAGGGACCTTCG...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAACGGTTTGGTGGGTGTTaGCTCGTCCAACCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFSSVHEALGPGLGTAQERFGGC*LVQPLL Trigger: CAGAAGTGGTTGGACGAGTCAACACCCACCAAACCG...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCGAACAAGTTTGGAAGTaGGGTCTTCTGCTCGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPGPRHSTGNLSQWPHACEQVWK*GLLLVC Trigger: GCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTC...GCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCATCGTCCAACCACTTCTaGAGCCATTCAAGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GPGLGTAQETCHSGHMPASSNHF*SHSRET Trigger: TGTCTCTCTTGAATGGCTGCAGAAGTGGTTGGACGA...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGCTGTGAGGAAGCCGCAGCCCAGGGATCCCAAGCTTTTCGGGAGTGGCCTGCCTTTGGGAAGTACTaGTGCAGCTTGCTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSCEEAAAQGSQAFREWPAFGKY*CSLLQA Trigger: GGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAAGGC...AGGCCACTCCCGAAAAGCTTGGGATCCCTGGGCTGCGGCTTCCTCACAGCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAAGCACTCTCTGTAACTTaGGAACTCGGGAGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFSSVHEALGPGLGTAQEALSVT*ELGSLW Trigger: CCAAAGGCTCCCGAGTTCCCAAGTTACAGAGAGTGC...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGCGGTTTGGTGGGTGTTaGCTCGTCCAACCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGNLSQWPHACNPSTWEERFGGC*LVQPLL Trigger: CAGAAGTGGTTGGACGAGTCAACACCCACCAAACCG...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCGAAATATACTGTGTTTaGGAAGGATTCACGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGPRHSTGNLSQWPHACEIYCV*EGFTSP Trigger: GGGAGACGTGAATCCTTCTCAAACACAGTATATTTC...GCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAACCACAGAACTGCTGCTaGACAACATTCCGAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: IFSSVHEALGPGLGTAQEPQNCC*TTFRTS Trigger: GGATGTTCGGAATGTTGTGCAGCAGCAGTTCTGTGG...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGATCTGAAAGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAAAGGCAGGGGCAGACACCAACAGTaGCTTCTCTCCCCGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDRSESQGPVSPCVPKGRGRHQQ*LLSPNL Trigger: AAGGTTCGGGGAGAGAAGGCACTGTTGGTGTCTGCC...CCTGCCTTTGGGGACACAGGGACTCACGGGACCCTGGCTTTCAGATCTGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCAGGTCCCTCTGCTGCTaGCACAGCAGACCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVATCLQSQHLGGGSRKIRSLCC*HSRPSL Trigger: CAGAGAAGGTCTGCTGTGCCAGCAGCAGAGGGACCT...GATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCTTGCCACCTAGCCCCACCACCTTTCAGGGGTGCTGAGGCCCTGCCACCTTGTGGACATAGATaGTGGCTTGGGTATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AASCHLAPPPFRGAEALPPCGHR*WLGYTL Trigger: GAGAGTATACCCAAGCCACCATCTATGTCCACAAGG...TGGCAGGGCCTCAGCACCCCTGAAAGGTGGTGGGGCTAGGTGGCAAGAAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCGCCGAAGCTCCAAGTTaGGGAACCACACCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVATCLQSQHLGGGSRKIAEAPS*GTTPGE Trigger: TTCTCCAGGTGTGGTTCCTCAACTTGGAGCTTCGGC...GATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGATCTGAAAGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAAAGGCAGGCATAAGTACAGCGCCTaGCGAAGCTCCAAGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KDRSESQGPVSPCVPKGRHKYSA*RSSKLR Trigger: CCTCAACTTGGAGCTTCGGCAGGCGCTGTACTTATG...CCTGCCTTTGGGGACACAGGGACTCACGGGACCCTGGCTTTCAGATCTGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGCTGTGAGGAAGCCGCAGCCCAGGGATCCCAAGCTTTTCGGGAGTGGCCTAGTACTGCTGCAGCTTaGTCCAAGCCTCCTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSCEEAAAQGSQAFREWPSTAAA*SKPPEK Trigger: TTTCTCAGGAGGCTTGGAGCAAGCTGCAGCAGTACT...AGGCCACTCCCGAAAAGCTTGGGATCCCTGGGCTGCGGCTTCCTCACAGCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAATTCCTTTGCCACACTTaGGTTTACGGGTCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: IFSSVHEALGPGLGTAQEFLCHT*VYGSGI Trigger: AATCCCAGACCCGTAAACCCAAGTGTGGCAAAGGAA...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTGCATTTCGGGAGCAGTaGGTTCCTTTGCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CAALLALPRASHHLRTLFAFREQ*VPLPHL Trigger: CAAGTGTGGCAAAGGAACTCACTGCTCCCGAAATGC...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGCCTTCGTGTAATCACTaGAGGTGCTGGGGCATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGNLSQWPHACNPSTWEEPSCNH*RCWGIS Trigger: ACTTATGCCCCAGCACCTGCAGTGATTACACGAAGG...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCTTGCCACCTAGCCCCACCACCTTTCAGGGGTGCTGAGGCCCTGCCATCAGGAACTCTGAGATaGAGTCTGTTAACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AASCHLAPPPFRGAEALPSGTLR*SLLTAC Trigger: ACAAGCAGTTAACAGACTGCATCTCAGAGTTCCTGA...TGGCAGGGCCTCAGCACCCCTGAAAGGTGGTGGGGCTAGGTGGCAAGAAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAAGCCTTTGGGAAGTACTaGTGCAGCTTGCTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYIVSPRPAWVTGNPAWEAFGKY*CSLLQA Trigger: GGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAAGGC...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGCTGTGAGGAAGCCGCAGCCCAGGGATCCCAAGCTTTTCGGGAGTGGCCTTATCAATCGGTTTGGTaGGTGTTGACTCGTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SSCEEAAAQGSQAFREWPYQSVW*VLTRPT Trigger: GGTTGGACGAGTCAACACCCACCAAACCGATTGATA...AGGCCACTCCCGAAAAGCTTGGGATCCCTGGGCTGCGGCTTCCTCACAGCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTAGCATCCGTGTCCTCTaGCCAGTTACTGAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: CAALLALPRASHHLRTLFSIRVL*PVTETW Trigger: CCATGTCTCAGTAACTGGCCAGAGGACACGGATGCT...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAATTGGGTTTACGGGTCTaGGATTTAGAAGGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFSSVHEALGPGLGTAQELGLRV*DLEGSA Trigger: AGCAGAACCTTCTAAATCCCAGACCCGTAAACCCAA...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105840.8 |
||
| 3UTR CAA 72 bp | GCAGCAGTGTTCCTCATCTACTCAGTGTTGCCTGTCTaGTACACACAGCTGTCACTGCAGGAGGAGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AAVFLIYSVLPV*YTQLSLQEEPR Trigger: ACGGGGCTCCTCCTGCAGTGACAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| 3UTR CAA 72 bp | AGCACAGTGACACTCCCAGGCTGGAGAGTTTTCTATTaGGGAAAGAGGCACCTGTTCCCTCAGGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STVTLPGWRVFY*GKRHLFPQGQQ Trigger: CTGCTGGCCCTGAGGGAACAGGTGCCTCTTTCCCAAATAGAAAACTCTCCAGCCTGGGAGTGTCACTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAACAAGTTTGGAAGTaGGGTCTTCTGCTCGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGNLSQWPHACNPSTWEEEQVWK*GLLLVC Trigger: GCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTC...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGATCTGAAAGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAAAGGCAGGTCTCCACAGAACTGCTaGTGCACAACATTCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDRSESQGPVSPCVPKGRSPQNC*CTTFRT Trigger: TGTTCGGAATGTTGTGCAGCAGCAGTTCTGTGGAGA...CCTGCCTTTGGGGACACAGGGACTCACGGGACCCTGGCTTTCAGATCTGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCAGTACTGCTGCAGCTTaGTCCAAGCCTCCTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVATCLQSQHLGGGSRKISTAAA*SKPPEK Trigger: TTTCTCAGGAGGCTTGGAGCAAGCTGCAGCAGTACT...GATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAATCCGGCATACAAACTTaGATGACATCATCCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFSSVHEALGPGLGTAQESGIQT*MTSSIA Trigger: TGCAATGGATGATGTCATGCAAGTTTGTATGCCGGA...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGCTGTGAGGAAGCCGCAGCCCAGGGATCCCAAGCTTTTCGGGAGTGGCCTCTCTTGAAGAAAGGCTaGGACTTGAACCATTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSCEEAAAQGSQAFREWPLLKKG*DLNHCV Trigger: CACACAATGGTTCAAGTCCCAGCCTTTCTTCAAGAG...AGGCCACTCCCGAAAAGCTTGGGATCCCTGGGCTGCGGCTTCCTCACAGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTGAACTCGGGAGCCTTTaGGAAGTACTGCTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCPQRQELLEKSVFQEGELGSL*EVLLQL Trigger: AAGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTC...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CAA 72 bp | TCAGGGCCAGCAGCAGTGTTCCTCATCTACTCAGTGTaGCCTGTCTTGTACACACAGCTGTCACTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGPAAVFLIYSV*PVLYTQLSLQE Trigger: CTCCTGCAGTGACAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTGCTGCTGGCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTCCACAGAACTGCTGCTaGACAACATTCCGAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCPQRQELLEKSVFQEGPQNCC*TTFRTS Trigger: GGATGTTCGGAATGTTGTGCAGCAGCAGTTCTGTGG...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTAGGGTCTTTCACGTGTaGGATGTAGTGGCCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: CAALLALPRASHHLRTLFRVFHV*DVVARI Trigger: TATTCTGGCCACTACATCGCACACGTGAAAGACCCT...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGATCTGAAAGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAAAGGCAGGCTAGCTGTAGCTTCTTaGCCTCCATCTTCTCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: KDRSESQGPVSPCVPKGRLAVAS*PPSSLC Trigger: ACATAGAGAAGATGGAGGGCAAGAAGCTACAGCTAG...CCTGCCTTTGGGGACACAGGGACTCACGGGACCCTGGCTTTCAGATCTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCAGCAGTGAGTTCCTTTaGCACACTTGGGTTTACGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLRSQSSRKVGVQLSWLSSEFL*HTWVYG Trigger: CCCGTAAACCCAAGTGTGGCAAAGGAACTCACTGCT...GAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCATTTGCTATCATCTTATaGAAGGCTTCGTTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGLGTAQETCHSGHMPAFAIIL*KASFSS Trigger: TGAAGAAAACGAAGCCTTGCATAAGATGATAGCAAA...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGCATTGCAGCGTAGTCTaGAATTGGTTCATCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGNLSQWPHACNPSTWEEHCSVV*NWFISL Trigger: AAGGCTGATGAACCAATTGCAGACTACGCTGCAATG...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTAGAAAGGCTGGGACTTaGACCATTGTGTGGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CAALLALPRASHHLRTLFRKAGT*TIVWFF Trigger: AAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCT...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCCCTCTGGCCAGTTACTaGGACATGGTCTGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLRSQSSRKVGVQLSWLPLASY*DMVCFC Trigger: ACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGG...GAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGATCTGAAAGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAAAGGCAGGATGCAGTCTGTTAACTaGTTGTGGCCTTGGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KDRSESQGPVSPCVPKGRMQSVN*LWPWMF Trigger: AAACATCCAAGGCCACAAGCAGTTAACAGACTGCAT...CCTGCCTTTGGGGACACAGGGACTCACGGGACCCTGGCTTTCAGATCTGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTTCCGCCTCACCATCTTaGTCATCTAGTTGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CAALLALPRASHHLRTLFSASPS*SSSCSR Trigger: TCTTGAACAACTAGATGAGCAAGATGGTGAGGCGGA...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATCTTCCCGTTGCTTTaGTCCGCCTCACCATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLCPALLTISEHSFFIANIFPLL*SASPSC Trigger: GCAAGATGGTGAGGCGGAGCAAAGCAACGGGAAGAT...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTGGTCTTCTGCTCGTTTaGTATCATCTTATGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CAALLALPRASHHLRTLFGLLLV*YHLMQG Trigger: GCCTTGCATAAGATGATAGCAAACGAGCAGAAGACC...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCCTCATCTACTCAGTGTTGCCTGTCTTGTACACACAGCTGTCACTGCGGCAGACACCAACAGTaGCTTCTCTCCCCGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QCSSSTQCCLSCTHSCHCGRHQQ*LLSPNL Trigger: AAGGTTCGGGGAGAGAAGGCACTGTTGGTGTCTGCC...GCAGTGACAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGAACTGCTTGTGGCCTTaGATGTTTAACTCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGNLSQWPHACNPSTWEENCLWP*MFNSSS Trigger: TGAACTGGAGTTAAACATCCAAGGCCACAAGCAGTT...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGTTGGGTTTACGGGTCTaGGATTTAGAAGGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGNLSQWPHACNPSTWEELGLRV*DLEGSR Trigger: TCTAGAACCTTCTAAATCCCAGACCCGTAAACCCAA...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055131.13 |
||
| CDS-3UTR CCA 90 bp | CCATGTTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGCCAGCAGGCAACCTTTaGTACAGCTCCTTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCWEFYPAAESYQKMLPMPAGNL*YSSFTS Trigger: GGAGGTGAAGGAGCTGTACCAAAGGTTGCCTGCTGG...CATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTCCTCGCTCGCCCTCTCCCTCCCACCTTAAATAGAAAATCTGAAACACGTTGTTCAAGAGCCAGCTaGCGCCAGCTACGCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLARPLPPTLNRKSETRCSRAS*RQLRKE Trigger: TTCCTTGCGTAGCTGGCGCCAGCTGGCTCTTGAACA...ACGTGTTTCAGATTTTCTATTTAAGGTGGGAGGGAGAGGGCGAGCGAGGACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTCCTCGCTCGCCCTCTCCCTCCCACCTTAAATAGAAAATCTGAAACACGTGCATTTCGGGAGCAGTaGGTTCCTTTGCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLARPLPPTLNRKSETRAFREQ*VPLPHL Trigger: CAAGTGTGGCAAAGGAACTCACTGCTCCCGAAATGC...ACGTGTTTCAGATTTTCTATTTAAGGTGGGAGGGAGAGGGCGAGCGAGGACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCGATATTTTATCAGGATaGAGCTTGTCGTGGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TVATCLQSQHLGGGSRKIDILSG*SLSWEH Trigger: GTGTTCCCACGACAAGCTTCATCCTGATAAAATATC...GATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGTACTTCCATTGCTTTaGTTAAAGTCAGGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGNLSQWPHACNPSTWEEVLPLL*LKSGSF Trigger: GAAGGATCCTGACTTTAATCAAAGCAATGGAAGTAC...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTGCATACAAACTTGCATaGCATCATCCATTGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCPQRQELLEKSVFQEGAYKLA*HHPLQR Trigger: ACGCTGCAATGGATGATGTCATGCAAGTTTGTATGC...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | CAAATATCTGGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGCGAAGGTCCCTCTGCTaGTGGCACAGCAGACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QISGDFQMSWPWERVGSWRRSLC*WHSRPS Trigger: AGAAGGTCTGCTGTGCCAGCAGCAGAGGGACCTTCG...CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGTAGGAAGATCTCCGGCATACAAACTTaGATGACATCATCCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVATCLQSQHLGGGSRKISGIQT*MTSSIA Trigger: TGCAATGGATGATGTCATGCAAGTTTGTATGCCGGA...GATCTTCCTACTTCCTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTATTTGGGAAAGAGGCACCTGTTCCCTCAGGGCCAGCAGCAGTGTTCCTCCTTTTAACGTCTGGTTaGCAGACACCAACAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLFGKEAPVPSGPAAVFLLLTSG*QTPTVP Trigger: AGGCACTGTTGGTGTCTGCCAACCAGACGTTAAAAG...GAGGAACACTGCTGCTGGCCCTGAGGGAACAGGTGCCTCTTTCCCAAATAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGAATTCTTTTAACGTCTaGTTGGCAGACACCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGNLSQWPHACNPSTWEENSFNV*LADTNS Trigger: ACTGTTGGTGTCTGCCAACCAGACGTTAAAAGAATT...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAATCAATTGACAAATTCTaGTCAAATGGAGCAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IFSSVHEALGPGLGTAQESIDKF*SNGATE Trigger: TTCAGTTGCTCCATTTGACCAGAATTTGTCAATTGA...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CAA 72 bp | CCCTGCAGGCGTGGTGCTCTGAAGACACGTTCCTCGTaGGCAAGTCCTTCACGTTCATGCTTTATTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCRRGALKTRSS*ASPSRSCFIER Trigger: TCTTTCAATAAAGCATGAACGTGAAGGACTTGCCAACGAGGAACGTGTCTTCAGAGCACCACGCCTGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CAA 72 bp | CTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTaGGTGAGTGAGGCTTGGTCCCATTTCTGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSNVLALGKSGL*VSEAWSHFCGA Trigger: AGCACCACAGAAATGGGACCAAGCCTCACTCACCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CAA 72 bp | GGGATGAGAAGGAAGATAAGGACTCGTGGGCTTGAGTaGTACTTGACGACTGTACTGGAGCGACAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMRRKIRTRGLE*YLTTVLERQSC Trigger: ACAGGACTGTCGCTCCAGTACAGTCGTCAAGTACAACTCAAGCCCACGAGTCCTTATCTTCCTTCTCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131755.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACTCTCCTAACCAAATGTaGTCGCCAATGCCAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLCPALLTISEHSFFIANSPNQM*SPMPTK Trigger: CTTGGTTGGCATTGGCGAGCACATTTGGTTAGGAGA...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACTCTCCACAGAACTGCTaGTGCACAACATTCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: WLCPALLTISEHSFFIANSPQNC*CTTFRT Trigger: TGTTCGGAATGTTGTGCAGCAGCAGTTCTGTGGAGA...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTATGCAGTCTGTTAACTaGTTGTGGCCTTGGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCPQRQELLEKSVFQEGMQSVN*LWPWMF Trigger: AAACATCCAAGGCCACAAGCAGTTAACAGACTGCAT...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATGCTTCACGAGGCAGACACCAACAGTaGCTTCTCTCCCCGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRVKDSLTASKSMSNASRGRHQQ*LLSPNL Trigger: AAGGTTCGGGGAGAGAAGGCACTGTTGGTGTCTGCC...TCGTGAAGCATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTTCCTCATCTACTCAGTGTTGCCTGTCTTGTACACACAGCTGTCACTGTATGTGGCAGAGCACTaGTCTCTTCCCCGAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: AVFLIYSVLPVLYTQLSLYVAEH*SLPRNT Trigger: TGTGTTTCGGGGAAGAGAGCAGTGCTCTGCCACATA...CAGTGACAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGCCAGCAGGCAACCTTTaGTACAGCTCCTTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRPAGNL*YSSFTS Trigger: GGAGGTGAAGGAGCTGTACCAAAGGTTGCCTGCTGG...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGGCACTCTCTGTAACTTaGGAACTCGGGAGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVLPSSRKLPKDAANVEALSVT*ELGSLW Trigger: CCAAAGGCTCCCGAGTTCCCAAGTTACAGAGAGTGC...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTGGTCTGTTTTTGTCCTaGAACAAGTTTGGAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCPQRQELLEKSVFQEGGLFLS*NKFGSE Trigger: CTCACTTCCAAACTTGTTCCAGGACAAAAACAGACC...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | GGGATGAGAAGGAAGATAAGGACTCGTGGGCTTGAGTTGTACTTGACGACTGTAAGCATCCGTGTCCTCTaGCCAGTTACTGAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: GMRRKIRTRGLELYLTTVSIRVL*PVTETW Trigger: CCATGTCTCAGTAACTGGCCAGAGGACACGGATGCT...TACAGTCGTCAAGTACAACTCAAGCCCACGAGTCCTTATCTTCCTTCTCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131755.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGATCCTTCTCCCCATCTaGCTTAGCCTCCTCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLPSSRKLPKDAANVEILLPI*LSLLLV Trigger: GACAAGGAGGAGGCTAAGCCAGATGGGGAGAAGGAT...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| 3UTR CAA 72 bp | CCGGTTCGGCTTTTCAAACGTTCAGGGATACTCTCTTaGCTGCCACCGAACACTGAACATTTCCTATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVRLFKRSGILS*LPPNTEHFLSL Trigger: GAGGGATAGGAAATGTTCAGTGTTCGGTGGCAGCAAAGAGAGTATCCCTGAACGTTTGAAAAGCCGAACCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGCAGTGTTCCTCATCTACTCAGTGTTGCCTGTCTTGTACACACAGCTGGTCAAATGGAGCAACTaGAAATGCGTGCATGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAAVFLIYSVLPVLYTQLVKWSN*KCVHDL Trigger: CAGATCATGCACGCATTTTCAGTTGCTCCATTTGAC...CAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTGCTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR CCA 90 bp | CAAATATCTGGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGGAACTCGGGAGCCTTTaGGAAGTACTGCTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QISGDFQMSWPWERVGSWELGSL*EVLLQL Trigger: AAGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTC...CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | CCATGTTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGCCTTGTGGACATAGATaGTGGCTTGGGTATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCWEFYPAAESYQKMLPMPCGHR*WLGYTL Trigger: GAGAGTATACCCAAGCCACCATCTATGTCCACAAGG...CATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTTCCTCATCTACTCAGTGTTGCCTGTCTTGTACACACAGCTGTCACTGATGGCATACTGTATGTaGCAGAGCACTGCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVFLIYSVLPVLYTQLSLMAYCM*QSTALF Trigger: GAAGAGAGCAGTGCTCTGCCACATACAGTATGCCAT...CAGTGACAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR TCA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAAAAAGCAAACAAGTACTaGAGATGCTCACAAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GYIVSPRPAWVTGNPAWEKANKY*RCSQIV Trigger: GACAATTTGTGAGCATCTTCAGTACTTGTTTGCTTT...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCTTGATTCATCTTTATTaGAGGTGCTCCCGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLRSQSSRKVGVQLSWLLIHLY*RCSRLS Trigger: AGATAAACGGGAGCACCTTCAATAAAGATGAATCAA...GAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTCTGAAAATGCGTGCATaGTCTGAATCTTCAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCPQRQELLEKSVFQEGLKMRA*SESSIL Trigger: AAGAATTGAAGATTCAGATCATGCACGCATTTTCAG...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTGTTCCTCATCTACTCAGTGTTGCCTGTCTTGTACACACAGCTGTCACTTGCATGGAAAGATGTaGAGTAGCCATACTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQCSSSTQCCLSCTHSCHLHGKM*SSHTEG Trigger: CCCTTCAGTATGGCTACTTCACATCTTTCCATGCAA...GTGACAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGAAATGTGCTCGCCAATaGCAACCAAGCAATTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVLPSSRKLPKDAANVEKCARQ*QPSNSG Trigger: ACCCGAATTGCTTGGTTGGCATTGGCGAGCACATTT...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGACGAAACGCATCAGCTaGAAGTTCAGAGTGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRTKRIS*KFRVQG Trigger: CCCTTGCACTCTGAACTTGCAGCTGATGCGTTTCGT...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGTGTCCACACTCTGCTTaGGCATCTCGGCCATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRCPHSA*ASRPFL Trigger: TAGAAATGGCCGAGATGCGCAAGCAGAGTGTGGACA...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGCAGTGTTCCTCATCTACTCAGTGTTGCCTGTCTTGTACACACAGCTGCCCCGAAACACATCTTaGATGGAAAGATGTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PAAVFLIYSVLPVLYTQLPRNTS*MERCEV Trigger: TACTTCACATCTTTCCATGCAAGATGTGTTTCGGGG...CAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTGCTGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR CCA 90 bp | CCATGTTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTGTGGACATAGATGGTaGCTTGGGTATACTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCWEFYPAAESYQKMLPMCGHRW*LGYTLE Trigger: TTCGAGAGTATACCCAAGCCACCATCTATGTCCACA...CATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATATCCTTCTCCCCATCTaGCTTAGCCTCCTCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CPALLTISEHSFFIANINILLPI*LSLLLV Trigger: GACAAGGAGGAGGCTAAGCCAGATGGGGAGAAGGAT...ATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATTCGCTGGGCCATATaGGAGCTATATTATTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLCPALLTISEHSFFIANIRWAI*ELYYYV Trigger: CACATAATAATATAGCTCTCATATGGCCCAGCGAAT...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055131.13 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCTGGTCACTCCTTGGCAGTCAGCGAGTAGTCAAAGATTAATGTCCGAGTGTCAAATGCTTGCATaGCATCATCCATTGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLVTPWQSASSQRLMSECQMLA*HHPLQR Trigger: ACGCTGCAATGGATGATGTCATGCAAGCATTTGACA...CTCGGACATTAATCTTTGACTACTCGCTGACTGCCAAGGAGTGACCAGAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157012.3 |
||
| CDS-3UTR GCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGAATTCGGGTTTCCTCTaGAGTTTCTTCTGCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRNSGFL*SFFCTR Trigger: GCGTGTGCAGAAGAAACTGCAGAGGAAACCCGAATT...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTCCTCGCTCGCCCTCTCCCTCCCACCTTAAATAGAAAATCTGAAACACGTTCAGGAACTCTGAGATaGAGTCTGTTAACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLARPLPPTLNRKSETRSGTLR*SLLTAC Trigger: ACAAGCAGTTAACAGACTGCATCTCAGAGTTCCTGA...ACGTGTTTCAGATTTTCTATTTAAGGTGGGAGGGAGAGGGCGAGCGAGGACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATACGAAACGCATCAGCTaGAAGTTCAGAGTGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPALLTISEHSFFIANINTKRIS*KFRVQG Trigger: CCCTTGCACTCTGAACTTGCAGCTGATGCGTTTCGT...ATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGAGGGTCTTTCACGTGTaGGATGTAGTGGCCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRRVFHV*DVVARI Trigger: TATTCTGGCCACTACATCGCACACGTGAAAGACCCT...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | CAAATATCTGGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGTCGTCCAACCACTTCTaGAGCCATTCAAGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QISGDFQMSWPWERVGSWSSNHF*SHSRET Trigger: TGTCTCTCTTGAATGGCTGCAGAAGTGGTTGGACGA...CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | CAAATATCTGGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGTATCAATCGGTTTGGTaGGTGTTGACTCGTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: QISGDFQMSWPWERVGSWYQSVW*VLTRPT Trigger: GGTTGGACGAGTCAACACCCACCAAACCGATTGATA...CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTATTTGGGAAAGAGGCACCTGTTCCCTCAGGGCCAGCAGCAGTGTTCCTAATTCTTTTAACGTCTaGTTGGCAGACACCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSIWERGTCSLRASSSVPNSFNV*LADTNS Trigger: ACTGTTGGTGTCTGCCAACCAGACGTTAAAAGAATT...AGGAACACTGCTGCTGGCCCTGAGGGAACAGGTGCCTCTTTCCCAAATAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGGCCGAAGCTCCAAGTTaGGGAACCACACCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLMPKHVNFVFLSGHSLAEAPS*GTTPGE Trigger: TTCTCCAGGTGTGGTTCCTCAACTTGGAGCTTCGGC...CAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGGGCTTTAACAAATCCTaGAGGATCGATGTATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVLPSSRKLPKDAANVEGFNKS*RIDVSS Trigger: AGACGATACATCGATCCTTCAGGATTTGTTAAAGCC...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGAGAAAGGCTGGGACTTaGACCATTGTGTGGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRRKAGT*TIVWFF Trigger: AAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCT...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACTTGATTCATCTTTATTaGAGGTGCTCCCGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: WLCPALLTISEHSFFIANLIHLY*RCSRLS Trigger: AGATAAACGGGAGCACCTTCAATAAAGATGAATCAA...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGGAAATATACTGTGTTTaGGAAGGATTCACGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLPSSRKLPKDAANVEEIYCV*EGFTSP Trigger: GGGAGACGTGAATCCTTCTCAAACACAGTATATTTC...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACCTGAAAATGCGTGCATaGTCTGAATCTTCAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLCPALLTISEHSFFIANLKMRA*SESSIL Trigger: AAGAATTGAAGATTCAGATCATGCACGCATTTTCAG...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTATTTGGGAAAGAGGCACCTGTTCCCTCAGGGCCAGCAGCAGTGTTCCTCTGAAAATGCGTGCATaGTCTGAATCTTCAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSIWERGTCSLRASSSVPLKMRA*SESSIL Trigger: AAGAATTGAAGATTCAGATCATGCACGCATTTTCAG...AGGAACACTGCTGCTGGCCCTGAGGGAACAGGTGCCTCTTTCCCAAATAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGGCATACAAACTTGCATaGCATCATCCATTGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRAYKLA*HHPLQR Trigger: ACGCTGCAATGGATGATGTCATGCAAGTTTGTATGC...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACCATAAGTACAGCGCCTaGCGAAGCTCCAAGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTFSLMPKHVNFVFLSGHHKYSA*RSSKLR Trigger: CCTCAACTTGGAGCTTCGGCAGGCGCTGTACTTATG...GTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTGTGCATCCTGCTGCTaGCCAGTATCTAAGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTFSLMPKHVNFVFLSGHCASCC*PVSKPK Trigger: CTTGGGCTTAGATACTGGGCAGCAGCAGGATGCACA...GTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGTATTCTCCACAGAACTaGTGCTGCACAACATTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRYSPQN*CCTTFR Trigger: TCGGAATGTTGTGCAGCAGCAGTTCTGTGGAGAATA...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | CAAATATCTGGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGTATTCTCCACAGAACTaGTGCTGCACAACATTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QISGDFQMSWPWERVGSWYSPQN*CCTTFR Trigger: TCGGAATGTTGTGCAGCAGCAGTTCTGTGGAGAATA...CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTAACATTTCGTAAAGGAAACAAAGGATGCCTATGCAACCAACCTCACAGTTTTGGGAAGTACTGCTaGAGCTTGCTCCAAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTFRKGNKGCLCNQPHSFGKYC*SLLQAS Trigger: GGAGGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAA...ACTGTGAGGTTGGTTGCATAGGCATCCTTTGTTTCCTTTACGAAATGTTAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGCATGACATCATCCATTaGAGCGTAGTCTGCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRHDIIH*SVVCNW Trigger: CCAATTGCAGACTACGCTGCAATGGATGATGTCATG...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATGCTTCACGACATGACATCATCCATTaGAGCGTAGTCTGCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRVKDSLTASKSMSNASRHDIIH*SVVCNW Trigger: CCAATTGCAGACTACGCTGCAATGGATGATGTCATG...TCGTGAAGCATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR GCA 90 bp | CTACACAAGCTCTCTAGTGACTCAGTTCTATCACCAGCTCTTAGACATACTGCTTTACTTATTATGTGCTaGAGTGGGCCAGCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHKLSSDSVLSPALRHTALLIMC*SGPASF Trigger: GAAGGAGGCTGGCCCACTGCAGCACATAATAAGTAA...AGCAGTATGTCTAAGAGCTGGTGATAGAACTGAGTCACTAGAGAGCTTGTGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131755.2 |
||
| CDS-3UTR CCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCATGTTCAAGAGCCAGCTaGCGCCAGCTACGCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSCSRAS*RQLRKE Trigger: TTCCTTGCGTAGCTGGCGCCAGCTGGCTCTTGAACA...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | GTGACTCAGTTCTATCACCAGCTCTTAGACATACTGCTCCTAAGTGTCACTAATTATTATGTGCTGCAGTaGGCCAGCCTCCTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTQFYHQLLDILLLSVTNYYVLQ*ASLLLF Trigger: GAAGAGAAGGAGGCTGGCCCACTGCAGCACATAATA...ATTAGTGACACTTAGGAGCAGTATGTCTAAGAGCTGGTGATAGAACTGAGTCAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131755.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGTACCATTCTCCAGACTaGGGGTCTTTCACGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FSLMPKHVNFVFLSGHSLYHSPD*GSFTCA Trigger: CGCACACGTGAAAGACCCTCAGTCTGGAGAATGGTA...CAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGGTACTTCCATTGCTTTaGTTAAAGTCAGGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLPSSRKLPKDAANVEVLPLL*LKSGSF Trigger: GAAGGATCCTGACTTTAATCAAAGCAATGGAAGTAC...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTAAGGCTCCAGCCAGATaGGGTAGGCGGTCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSKAPAR*GRRSRC Trigger: ACATCGAGACCGCCTACCGCATCTGGCTGGAGCCTT...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTAACATTTCGTAAAGGAAACAAAGGATGCCTATGCAACCAACCTCACAGTAGCAGTGAGTTCCTTTaGCACACTTGGGTTTACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTFRKGNKGCLCNQPHSSSEFL*HTWVYG Trigger: CCCGTAAACCCAAGTGTGGCAAAGGAACTCACTGCT...ACTGTGAGGTTGGTTGCATAGGCATCCTTTGTTTCCTTTACGAAATGTTAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | CAAATATCTGGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGATAAACCAGCATGTATaGATTTCGGGAGCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QISGDFQMSWPWERVGSWINQHV*ISGAVS Trigger: ACTCACTGCTCCCGAAATGCATACATGCTGGTTTAT...CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTGTCCACACTCTGCTTaGGCATCTCGGCCATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TTFSLMPKHVNFVFLSGHCPHSA*ASRPFL Trigger: TAGAAATGGCCGAGATGCGCAAGCAGAGTGTGGACA...GTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | CAAATATCTGGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGTCTGTTAACTGCTTGTaGCCTTGGATGTTTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QISGDFQMSWPWERVGSWSVNCL*PWMFNS Trigger: GGAGTTAAACATCCAAGGCCACAAGCAGTTAACAGA...CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGCCAGTTACTGAGACATaGTCTGTTTTTGTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRPVTET*SVFVLE Trigger: TTCCAGGACAAAAACAGACCATGTCTCAGTAACTGG...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCAAGCATCCGTGTCCTCTaGCCAGTTACTGAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSSIRVL*PVTETW Trigger: CCATGTCTCAGTAACTGGCCAGAGGACACGGATGCT...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTAGGTCCCTCTGCTGCTaGCACAGCAGACCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSRSLCC*HSRPSL Trigger: CAGAGAAGGTCTGCTGTGCCAGCAGCAGAGGGACCT...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATGCTTCACTTTTAACGTCTGGTTaGCAGACACCAACAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSRVKDSLTASKSMSNASLLTSG*QTPTVP Trigger: AGGCACTGTTGGTGTCTGCCAACCAGACGTTAAAAG...TGAAGCATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGAATTCTTTTAACGTCTaGTTGGCAGACACCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVLPSSRKLPKDAANVENSFNV*LADTNS Trigger: ACTGTTGGTGTCTGCCAACCAGACGTTAAAAGAATT...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGAATTCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATCCTTTGAACCTTGCATaGCATCATCCATTGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EKNSRVKDSLTASKSMSNPLNLA*HHPLQR Trigger: ACGCTGCAATGGATGATGTCATGCAAGGTTCAAAGG...ATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGAATTCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR TCA 90 bp | AATTCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATGCTTCATGGAATGGATCCCTTTaGACCTTGCATGACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: NSRVKDSLTASKSMSNASWNGSL*TLHDII Trigger: GATGATGTCATGCAAGGTTCAAAGGGATCCATTCCA...TGAAGCATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTCCTTCGTGTAATCACTaGAGGTGCTGGGGCATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFFNAQTCQFRLPFWSLLPSCNH*RCWGIS Trigger: ACTTATGCCCCAGCACCTGCAGTGATTACACGAAGG...AAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AATTCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATGCTTCACATTGCAGCGTAGTCTaGAATTGGTTCATCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSRVKDSLTASKSMSNASHCSVV*NWFISL Trigger: AAGGCTGATGAACCAATTGCAGACTACGCTGCAATG...TGAAGCATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGTATTATGTGCTGCAGTaGGCCAGCCTCCTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSLMPKHVNFVFLSGHSLYYVLQ*ASLLLF Trigger: GAAGAGAAGGAGGCTGGCCCACTGCAGCACATAATA...CAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055131.13 |
||
| CDS-3UTR CCA 90 bp | TTGCTAACATTTCGTAAAGGAAACAAAGGATGCCTATGCAACCAACCTCACAGTCTTTTAACGTCTGGTTaGCAGACACCAACAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTFRKGNKGCLCNQPHSLLTSG*QTPTVP Trigger: AGGCACTGTTGGTGTCTGCCAACCAGACGTTAAAAG...ACTGTGAGGTTGGTTGCATAGGCATCCTTTGTTTCCTTTACGAAATGTTAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTCCTCGCTCGCCCTCTCCCTCCCACCTTAAATAGAAAATCTGAAACACGTTCAATTGACAAATTCTaGTCAAATGGAGCAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLARPLPPTLNRKSETRSIDKF*SNGATE Trigger: TTCAGTTGCTCCATTTGACCAGAATTTGTCAATTGA...ACGTGTTTCAGATTTTCTATTTAAGGTGGGAGGGAGAGGGCGAGCGAGGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCCTCATCTACTCAGTGTTGCCTGTCTTGTACACACAGCTGTCACTGCTCAATTGACAAATTCTaGTCAAATGGAGCAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QCSSSTQCCLSCTHSCHCSIDKF*SNGATE Trigger: TTCAGTTGCTCCATTTGACCAGAATTTGTCAATTGA...GCAGTGACAGCTGTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS-3UTR TCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTTACCATTCTCCAGACTaGGGGTCTTTCACGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSYHSPD*GSFTCA Trigger: CGCACACGTGAAAGACCCTCAGTCTGGAGAATGGTA...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATGCTTCACGACTGAAAATGCGTGCATaGTCTGAATCTTCAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRVKDSLTASKSMSNASRLKMRA*SESSIL Trigger: AAGAATTGAAGATTCAGATCATGCACGCATTTTCAG...TCGTGAAGCATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGAATTCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATGTCAAATGGAGCAACTaGAAATGCGTGCATGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKNSRVKDSLTASKSMSNVKWSN*KCVHDL Trigger: CAGATCATGCACGCATTTTCAGTTGCTCCATTTGAC...ATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGAATTCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR GCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCAAAATGTGCTCGCCAATaGCAACCAAGCAATTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSKCARQ*QPSNSG Trigger: ACCCGAATTGCTTGGTTGGCATTGGCGAGCACATTT...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGTCTCCTAACCAAATGTaGTCGCCAATGCCAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLMPKHVNFVFLSGHSLSPNQM*SPMPTK Trigger: CTTGGTTGGCATTGGCGAGCACATTTGGTTAGGAGA...CAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTTGTGCATCCTGCTGCTaGCCAGTATCTAAGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSCASCC*PVSKPK Trigger: CTTGGGCTTAGATACTGGGCAGCAGCAGGATGCACA...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTATCTTCCCGTTGCTTTaGTCCGCCTCACCATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSIFPLL*SASPSC Trigger: GCAAGATGGTGAGGCGGAGCAAAGCAACGGGAAGAT...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGCTTTTAACGTCTGGTTaGCAGACACCAACAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLMPKHVNFVFLSGHSLLLTSG*QTPTVP Trigger: AGGCACTGTTGGTGTCTGCCAACCAGACGTTAAAAG...CAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTGGTCACTCCTTGGCAGTCAGCGAGTAGTCAAAGATTAATGTCCGAGTCAATTGACAAATTCTaGTCAAATGGAGCAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFLVTPWQSASSQRLMSESIDKF*SNGATE Trigger: TTCAGTTGCTCCATTTGACCAGAATTTGTCAATTGA...CTCGGACATTAATCTTTGACTACTCGCTGACTGCCAAGGAGTGACCAGAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157012.3 |
||
| 3UTR CAA 72 bp | GAACACTCTTTCTTCATTGCAAACATAAATGCCATGTaGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EHSFFIANINAM*GVLPSSRKLPK Trigger: TTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAACATGGCATTTATGTTTGCAATGAAGAAAGAGTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTAGCTGTAGCTTCTTaGCCTCCATCTTCTCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSLAVAS*PPSSLC Trigger: ACATAGAGAAGATGGAGGGCAAGAAGCTACAGCTAG...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCATCCGCCTCACCATCTTaGTCATCTAGTTGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSSASPS*SSSCSR Trigger: TCTTGAACAACTAGATGAGCAAGATGGTGAGGCGGA...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCAGGTCTTCTGCTCGTTTaGTATCATCTTATGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSGLLLV*YHLMQG Trigger: GCCTTGCATAAGATGATAGCAAACGAGCAGAAGACC...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGCATTGCAGCGTAGTCTaGAATTGGTTCATCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSLMPKHVNFVFLSGHSLHCSVV*NWFISL Trigger: AAGGCTGATGAACCAATTGCAGACTACGCTGCAATG...CAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000157012.3 |
||
| CDS-3UTR GCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACATTGCAGCGTAGTCTaGAATTGGTTCATCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSHCSVV*NWFISL Trigger: AAGGCTGATGAACCAATTGCAGACTACGCTGCAATG...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000157012.3 |
||
| CDS-3UTR GCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACATGACATCATCCATTaGAGCGTAGTCTGCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSHDIIH*SVVCNW Trigger: CCAATTGCAGACTACGCTGCAATGGATGATGTCATG...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000157012.3 |
||
| CDS-3UTR GCA 90 bp | ACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCCCCAAAATCCATCACTaGCCTTCATTGTCGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFSLMPKHVNFVFLSGHSPKIHH*PSLSIS Trigger: TGAAATCGACAATGAAGGGCAGTGATGGATTTTGGG...GGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGTTCCTTTGCCACACTTaGGTTTACGGGTCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VLHVHALLKDEYRLNKGWFLCHT*VYGSGI Trigger: AATCCCAGACCCGTAAACCCAAGTGTGGCAAAGGAA...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCTTGAAGAAAGGCTaGGACTTGAACCATTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSLLKKG*DLNHCV Trigger: CACACAATGGTTCAAGTCCCAGCCTTTCTTCAAGAG...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | ACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCGGTCTGTTTTTGTCCTaGAACAAGTTTGGAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TFSLMPKHVNFVFLSGHSGLFLS*NKFGSE Trigger: CTCACTTCCAAACTTGTTCCAGGACAAAAACAGACC...GGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATGCTTCAAATTCTTTTAACGTCTaGTTGGCAGACACCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSRVKDSLTASKSMSNASNSFNV*LADTNS Trigger: ACTGTTGGTGTCTGCCAACCAGACGTTAAAAGAATT...TGAAGCATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR TCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTCCTCTGGCCAGTTACTaGGACATGGTCTGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSPLASY*DMVCFC Trigger: ACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGG...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGGTCAAATGGAGCAACTaGAAATGCGTGCATGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLHVHALLKDEYRLNKGWVKWSN*KCVHDL Trigger: CAGATCATGCACGCATTTTCAGTTGCTCCATTTGAC...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGCATGACATCATCCATTaGAGCGTAGTCTGCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLHVHALLKDEYRLNKGWHDIIH*SVVCNW Trigger: CCAATTGCAGACTACGCTGCAATGGATGATGTCATG...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | ACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCCAAGAGCATGTCAAATaGTTGCATGACATCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TFSLMPKHVNFVFLSGHSQEHVK*LHDIIH Trigger: ATGGATGATGTCATGCAAGCATTTGACATGCTCTTG...GGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157012.3 |
||
| CDS-3UTR CCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCATCCTCCTCTCACAGTTaGGATCATCAATGCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSSSSHS*DHQCYE Trigger: TTCATAGCATTGATGATCCCAACTGTGAGAGGAGGA...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGTCCTCCTCTCACAGTTaGGATCATCAATGCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLMPKHVNFVFLSGHSLSSSHS*DHQCYE Trigger: TTCATAGCATTGATGATCCCAACTGTGAGAGGAGGA...CAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGAACTGCTTGTGGCCTTaGATGTTTAACTCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLMPKHVNFVFLSGHSLNCLWP*MFNSSS Trigger: TGAACTGGAGTTAAACATCCAAGGCCACAAGCAGTT...CAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR TCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGTCAAATGGAGCAACTaGAAATGCGTGCATGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSVKWSN*KCVHDL Trigger: CAGATCATGCACGCATTTTCAGTTGCTCCATTTGAC...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTAGCATGTCAAATGCTTaGATGACATCATCCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFFNAQTCQFRLPFWSLLSMSNA*MTSSIA Trigger: TGCAATGGATGATGTCATGCAAGCATTTGACATGCT...AAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157012.3 |
||
| CDS-3UTR CCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTTGTGGACATAGATGGTaGCTTGGGTATACTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSCGHRW*LGYTLE Trigger: TTCGAGAGTATACCCAAGCCACCATCTATGTCCACA...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CCA 90 bp | CAGAAAGAAAAGAATTCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAATTGACAAATTCTaGTCAAATGGAGCAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKEKNSRVKDSLTASKSMSIDKF*SNGATE Trigger: TTCAGTTGCTCCATTTGACCAGAATTTGTCAATTGA...CATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGAATTCTTTTCTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTATAAACCAGCATGTATaGATTTCGGGAGCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSINQHV*ISGAVS Trigger: ACTCACTGCTCCCGAAATGCATACATGCTGGTTTAT...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR GCA 90 bp | GTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTTTCCGGCATACAAACTaGAGAAAGAAAAGAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFFNAQTCQFRLPFWSLLFRHTN*RKKRIP Trigger: TGGAATTCTTTTCTTTCTGCAGTTTGTATGCCGGAA...AAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000157012.3 |
||
| CDS-3UTR CCA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTCCAGTTACTGAGACATaGTCTGTTTTTGTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSPVTET*SVFVLE Trigger: TTCCAGGACAAAAACAGACCATGTCTCAGTAACTGG...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR TCA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGAAAGCAAACAAGTACTaGAGATGCTCACAAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLHVHALLKDEYRLNKGWKANKY*RCSQIV Trigger: GACAATTTGTGAGCATCTTCAGTACTTGTTTGCTTT...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR GCA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCATTTGCTATCATCTTATaGAAGGCTTCGTTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSFAIIL*KASFSS Trigger: TGAAGAAAACGAAGCCTTGCATAAGATGATAGCAAA...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS CCA 90 bp | CCGCGGAGCCATAGCCTTGACCGAGGTAGCACTCGCCGAGCCCGGTaGCCTCCGGCGCCGCCTCCGTCTCCGCCCGAATGGGCACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRSHSLDRGSTRRAR*PPAPPPSPPEWARA Trigger: GGCCCGTGCCCATTCGGGCGGAGACGGAGGCGGCGCCGGAGGCCACCGGGCTCGGCGAGTGCTACCTCGGTCAAGGCTATGGCTCCGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153100.8 |
||
| CDS GCA 90 bp | TGCAGTTTCTTCTGCACACGCCTCGGATACAAGGCTCCAGCCAGATaGGGTAGGCGGTCTCGATGTGCTCCTGCGACACCTCCTCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSFFCTRLGYKAPAR*GRRSRCAPATPPRA Trigger: GGCCCGAGGAGGTGTCGCAGGAGCACATCGAGACCGCCTACCGCATCTGGCTGGAGCCTTGTATCCGAGGCGTGTGCAGAAGAAACTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
||
| CDS TCA 90 bp | GTGCCTTCTCTCCCCGAACCTTCCTGTGCCTCGTGCTCCTCCGGATaGCCTGCTTCTGGTAGGCCACATAGCCCTGTTGGGATGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPSLPEPSCASCSSG*PASGRPHSPVGMSS Trigger: AGAAGACATCCCAACAGGGCTATGTGGCCTACCAGAAGCAGGTCATCCGGAGGAGCACGAGGCACAGGAAGGTTCGGGGAGAGAAGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141426.8 ENSMUST00000141628.8 ENSMUST00000151807.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCAGTTCTTTTCCTGGGCTaGCAGCCTATAAACCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GPGLGTAQETCHSGHMPAVLFLG*QPINQH Trigger: ATGCTGGTTTATAGGCTGCAAGCCCAGGAAAAGAAC...TGCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | TCAAGCTGTGAGGAAGCCGCAGCCCAGGGATCCCAAGCTTTTCGGGAGTGGCCTTCCAGCAGGCAACCTTaGGTACAGCTCCTTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSCEEAAAQGSQAFREWPSSRQP*VQLLHL Trigger: GAGGTGAAGGAGCTGTACCAAAGGTTGCCTGCTGGA...AGGCCACTCCCGAAAAGCTTGGGATCCCTGGGCTGCGGCTTCCTCACAGCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAATATCTTCCCGTTGCTTaGCTCCGCCTCACCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFSSVHEALGPGLGTAQEYLPVA*LRLTIL Trigger: CAAGATGGTGAGGCGGAGCAAAGCAACGGGAAGATA...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | GCTGCTTCTTGCCACCTAGCCCCACCACCTTTCAGGGGTGCTGAGGCCCTGCCATGTCCTGGAACAAGTTaGGAAGTGAGGTCTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AASCHLAPPPFRGAEALPCPGTS*EVRSSA Trigger: AGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACA...TGGCAGGGCCTCAGCACCCCTGAAAGGTGGTGGGGCTAGGTGGCAAGAAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | GGGCCCGGGCCTCGGCACAGCACAGGAAACCTGTCACAGTGGCCACATGCCTGCAGTTTCGAGTCTTCTTaGGTGAGGGAAGGAAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: GPGPRHSTGNLSQWPHACSFESS*VREGNV Trigger: TACATTTCCTTCCCTCACCAAAGAAGACTCGAAACT...GCAGGCATGTGGCCACTGTGACAGGTTTCCTGTGCTGTGCCGAGGCCCGGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS CCA 90 bp | GCACTGCGAGCAGCACTCTCTGTAACTTGGGAACTCGGGAGCCTTTaGGAAGTACTGCTGCAGCTTGCTCCAAGCCTCCTGAGAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALRAALSVTWELGSL*EVLLQLAPSLLRNQ Trigger: CTGGTTTCTCAGGAGGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCCCAAGTTACAGAGAGTGCTGCTCGCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
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| CDS-3UTR CAA 90 bp | AAGGACAGATCTGAAAGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAAAGGCAGGGTTCCTTTGCCACACTaGGGTTTACGGGTCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KDRSESQGPVSPCVPKGRVPLPH*GLRVWD Trigger: ATCCCAGACCCGTAAACCCAAGTGTGGCAAAGGAAC...CCTGCCTTTGGGGACACAGGGACTCACGGGACCCTGGCTTTCAGATCTGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | GCTGCTTCTTGCCACCTAGCCCCACCACCTTTCAGGGGTGCTGAGGCCCTGCCAGAGCTTTTGAATCATTaGCCATTCGCTGGGCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: AASCHLAPPPFRGAEALPELLNH*PFAGPY Trigger: ATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTC...TGGCAGGGCCTCAGCACCCCTGAAAGGTGGTGGGGCTAGGTGGCAAGAAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAATGCCGAAGCTCCAAGTaGAGGAACCACACCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GYIVSPRPAWVTGNPAWECRSSK*RNHTWR Trigger: TCTCCAGGTGTGGTTCCTCAACTTGGAGCTTCGGCA...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | AGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCTGCCGAAGCTCCAAGTaGAGGAACCACACCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLRSQSSRKVGVQLSWLCRSSK*RNHTWR Trigger: TCTCCAGGTGTGGTTCCTCAACTTGGAGCTTCGGCA...GAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | AGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCGAGCTTGGAAAACTCTaGTGCATCCTGCTGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLRSQSSRKVGVQLSWLELGKL*CILLLP Trigger: GGGCAGCAGCAGGATGCACAAGAGTTTTCCAAGCTC...GAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGACGATCTACCAGCTCTaGAAGAAAGGCTGGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGNLSQWPHACNPSTWEETIYQL*KKGWDL Trigger: CAAGTCCCAGCCTTTCTTCAAGAGCTGGTAGATCGT...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTTATCTTCCCGTTGCTTaGCTCCGCCTCACCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CAALLALPRASHHLRTLFYLPVA*LRLTIL Trigger: CAAGATGGTGAGGCGGAGCAAAGCAACGGGAAGATA...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | GCTGCTTCTTGCCACCTAGCCCCACCACCTTTCAGGGGTGCTGAGGCCCTGCCAAGACATGGTCTGTTTTaGTCCTGGAACAAGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AASCHLAPPPFRGAEALPRHGLF*SWNKFG Trigger: TCCAAACTTGTTCCAGGACAAAAACAGACCATGTCT...TGGCAGGGCCTCAGCACCCCTGAAAGGTGGTGGGGCTAGGTGGCAAGAAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGTCTTTTAACGTCTGGTaGGCAGACACCAACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGNLSQWPHACNPSTWEESFNVW*ADTNSA Trigger: GGCACTGTTGGTGTCTGCCAACCAGACGTTAAAAGA...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | AAGGACAGATCTGAAAGCCAGGGTCCCGTGAGTCCCTGTGTCCCCAAAGGCAGGCTTTCACAGTTAGTCTaGGACCTCCTCCATATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: KDRSESQGPVSPCVPKGRLSQLV*DLLHID Trigger: GTCGATATGGAGGAGGTCCAAGACTAACTGTGAAAG...CCTGCCTTTGGGGACACAGGGACTCACGGGACCCTGGCTTTCAGATCTGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS GCA 90 bp | AGCTCCTTCACCTCCTCGTGCTTCGCTTTGCCTTTGTCCACACTCTaGTTGCGCATCTCGGCCATTTCTACACACCACTCCTCGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFTSSCFALPLSTL*LRISAISTHHSSNL Trigger: CAAATTCGAGGAGTGGTGTGTAGAAATGGCCGAGATGCGCAAGCAGAGTGTGGACAAAGGCAAAGCGAAGCACGAGGAGGTGAAGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAACTGGGACTTGAACCATaGTGTGGTTCTTTTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GYIVSPRPAWVTGNPAWELGLEP*CGSFPG Trigger: CCCAGGAAAAGAACCACACAATGGTTCAAGTCCCAG...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | TCCCTGTGTCCCCAAAGGCAGGAGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTACGATCTACCAGCTCTaGAAGAAAGGCTGGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLCPQRQELLEKSVFQEGTIYQL*KKGWDL Trigger: CAAGTCCCAGCCTTTCTTCAAGAGCTGGTAGATCGT...ACCTTCCTGGAAGACTGACTTCTCAAGGAGCTCCTGCCTTTGGGGACACAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | TGTGCAGCTCTCCTGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTTGTCCTGGAACAAGTTaGGAAGTGAGGTCTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CAALLALPRASHHLRTLFCPGTS*EVRSSA Trigger: AGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACA...AAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCAGGAGAGCTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | ATTTTCTCTAGTGTGCACGAGGCGCTGGGCCCGGGCCTCGGCACAGCACAGGAACACAACAAAGAGCTTTaGAATCATTTGCCATTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: IFSSVHEALGPGLGTAQEHNKEL*NHLPFA Trigger: AGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTG...TTCCTGTGCTGTGCCGAGGCCCGGGCCCAGCGCCTCGTGCACACTAGAGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS GCA 90 bp | CCTTCACCTCCTCGTGCTTCGCTTTGCCTTTGTCCACACTCTGCTTaGGCATCTCGGCCATTTCTACACACCACTCCTCGAATTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSPPRASLCLCPHSA*ASRPFLHTTPRIWN Trigger: ATTCCAAATTCGAGGAGTGGTGTGTAGAAATGGCCGAGATGCGCAAGCAGAGTGTGGACAAAGGCAAAGCGAAGCACGAGGAGGTGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | GGTTACATAGTGAGTCCAAGGCCAGCCTGGGTTACAGGAAACCCTGCCTGGGAAGCATTGAGCTTCTTCTaGTGTCCAGTTTGCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GYIVSPRPAWVTGNPAWEALSFF*CPVCLS Trigger: TGACAGGCAAACTGGACACAAGAAGAAGCTCAATGC...TTCCCAGGCAGGGTTTCCTGTAACCCAGGCTGGCCTTGGACTCACTATGTAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACGTTCCTTTGCCACACTaGGGTTTACGGGTCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: WLCPALLTISEHSFFIANVPLPH*GLRVWD Trigger: ATCCCAGACCCGTAAACCCAAGTGTGGCAAAGGAAC...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCCAGCAGCAGTGTTCCTCATCTACTCAGTGTTGCCTGTCTTGTACACACTCTTTTAACGTCTGGTaGGCAGACACCAACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGQQQCSSSTQCCLSCTHSFNVW*ADTNSA Trigger: GGCACTGTTGGTGTCTGCCAACCAGACGTTAAAAGA...GTGTGTACAAGACAGGCAACACTGAGTAGATGAGGAACACTGCTGCTGGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
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| CDS GCA 90 bp | GTCATTGAACTTGTACCATTCTCCAGACTGAGGGTCTTTCACGTGTaGGATGTAGTGGCCAGAATAGGCGCTGACTCCTCTGTGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VIELVPFSRLRVFHV*DVVARIGADSSVDE Trigger: CTCATCCACAGAGGAGTCAGCGCCTATTCTGGCCACTACATCGCACACGTGAAAGACCCTCAGTCTGGAGAATGGTACAAGTTCAATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGAAACCTGTCACAGTGGCCACATGCCTGCAATCCCAGCACCTGGGAGGAGGAAGATGCTCACAAATaGTCTGAGGCTCATAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGNLSQWPHACNPSTWEEEDAHK*SEAHNL Trigger: AAGATTATGAGCCTCAGACAATTTGTGAGCATCTTC...CTCCTCCCAGGTGCTGGGATTGCAGGCATGTGGCCACTGTGACAGGTTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACCTGGGACTTGAACCATaGTGTGGTTCTTTTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WLCPALLTISEHSFFIANLGLEP*CGSFPG Trigger: CCCAGGAAAAGAACCACACAATGGTTCAAGTCCCAG...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS GCA 90 bp | TTCTTCTTGTGTCCAGTTTGCCTGTCAAACACGAAACGCATCAGCTaGAAGTTCAGAGTGCAAGGGAGGCTCAGAAGCCGGATTTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: FFLCPVCLSNTKRIS*KFRVQGRLRSRIFR Trigger: ACGGAAAATCCGGCTTCTGAGCCTCCCTTGCACTCTGAACTTGCAGCTGATGCGTTTCGTGTTTGACAGGCAAACTGGACACAAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CCA 90 bp | CCTTCATCACCTTTTTGTTATCCACAACCTTGTGGACATAGATGGTaGCTTGGGTATACTCTCGAAGGTCCCTCTGCTGCTGGCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSPFCYPQPCGHRW*LGYTLEGPSAAGTA Trigger: TGCTGTGCCAGCAGCAGAGGGACCTTCGAGAGTATACCCAAGCCACCATCTATGTCCACAAGGTTGTGGATAACAAAAAGGTGATGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141628.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCTCCTTCATCACCTTTTaGTTATCCACAACCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLRSQSSRKVGVQLSWLSFITF*LSTTLW Trigger: CCACAAGGTTGTGGATAACAAAAAGGTGATGAAGGA...GAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS TCA 90 bp | CTAGCTGTAGCTTCTTGCCCTCCATCTTCTCTATGTCCTCGTCATTaGACTTGTACCATTCTCCAGACTGAGGGTCTTTCACGTGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LAVASCPPSSLCPRH*TCTILQTEGLSRVR Trigger: TCGCACACGTGAAAGACCCTCAGTCTGGAGAATGGTACAAGTTCAATGACGAGGACATAGAGAAGATGGAGGGCAAGAAGCTACAGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS TCA 90 bp | TCGGGAGCCTTTGGGAAGTACTGCTGCAGCTTGCTCCAAGCCTCCTaGGAAACCAGCCTTCTTTCATTTTCAGATATGCTTAACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGAFGKYCCSLLQAS*ETSLLSFSDMLNSP Trigger: TGGAGAGTTAAGCATATCTGAAAATGAAAGAAGGCTGGTTTCTCAGGAGGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAAGGCTCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS GCA 90 bp | TGTGTGGTTCTTTTCCTGGGCTTGCAGCCTATAAACCAGCATGTATaGATTTCGGGAGCAGTGAGTTCCTTTGCCACACTTGGGTTTACG | + |
|
Preference number: 5 (lower is better) Translates to: CVVLFLGLQPINQHV*ISGAVSSFATLGFT Trigger: CGTAAACCCAAGTGTGGCAAAGGAACTCACTGCTCCCGAAATGCATACATGCTGGTTTATAGGCTGCAAGCCCAGGAAAAGAACCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS GCA 90 bp | TGTAACTTGGGAACTCGGGAGCCTTTGGGAAGTACTGCTGCAGCTTaGTCCAAGCCTCCTGAGAAACCAGCCTTCTTTCATTTTCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: CNLGTREPLGSTAAA*SKPPEKPAFFHFQI Trigger: TATCTGAAAATGAAAGAAGGCTGGTTTCTCAGGAGGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCCCAAGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS GCA 90 bp | TCTTATGCAAGGCTTCGTTTTCTTCACCTTCTCGTTCTAGTATCTTaGACTGCGAGCAGCACTCTCTGTAACTTGGGAACTCGGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SYARLRFLHLLVLVS*TASSTLCNLGTREP Trigger: AGGCTCCCGAGTTCCCAAGTTACAGAGAGTGCTGCTCGCAGTGCAAGATACTAGAACGAGAAGGTGAAGAAAACGAAGCCTTGCATAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS CCA 90 bp | GCTTGTCGTGGGAACACAGGCAAGCATTATTATCAATCGGTTTGGTaGGTGTTGACTCGTCCAACCACTTCTGCAGCCATTCAAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ACRGNTGKHYYQSVW*VLTRPTTSAAIQER Trigger: TCTCTCTTGAATGGCTGCAGAAGTGGTTGGACGAGTCAACACCCACCAAACCGATTGATAATAATGCTTGCCTGTGTTCCCACGACAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CCA 90 bp | GAAGCTTGTCGTGGGAACACAGGCAAGCATTATTATCAATCGGTTTaGTGGGTGTTGACTCGTCCAACCACTTCTGCAGCCATTCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EACRGNTGKHYYQSV*WVLTRPTTSAAIQE Trigger: CTCTTGAATGGCTGCAGAAGTGGTTGGACGAGTCAACACCCACCAAACCGATTGATAATAATGCTTGCCTGTGTTCCCACGACAAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CCA 90 bp | AGTCCTTCATCACCTTTTTGTTATCCACAACCTTGTGGACATAGATaGTGGCTTGGGTATACTCTCGAAGGTCCCTCTGCTGCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPSSPFCYPQPCGHR*WLGYTLEGPSAAGT Trigger: TGTGCCAGCAGCAGAGGGACCTTCGAGAGTATACCCAAGCCACCATCTATGTCCACAAGGTTGTGGATAACAAAAAGGTGATGAAGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141628.8 |
||
| CDS CCA 90 bp | GCCCTGTTGGGATGTCTTCTGTCGCTTGGTACTTCCATTGCTCTCTaGCCAGTTACTGAGACATGGTCTGTTTTTGTCCTGGAACAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALLGCLLSLGTSIAL*PVTETWSVFVLEQV Trigger: AACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGAGCAATGGAAGTACCAAGCGACAGAAGACATCCCAACAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141426.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACGAGCTTTTGAATCATTaGCCATTCGCTGGGCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: WLCPALLTISEHSFFIANELLNH*PFAGPY Trigger: ATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTC...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCGGTACTTCCATTGCTTaGATTAAAGTCAGGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLRSQSSRKVGVQLSWLGTSIA*IKVRIL Trigger: AAGGATCCTGACTTTAATCAAAGCAATGGAAGTACC...GAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS TCA 90 bp | GTGGGAACACAGGCAAGCATTATTATCAATCGGTTTGGTGGGTGTTaGCTCGTCCAACCACTTCTGCAGCCATTCAAGAGAGACAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: VGTQASIIINRFGGC*LVQPLLQPFKRDKL Trigger: GAGTTTGTCTCTCTTGAATGGCTGCAGAAGTGGTTGGACGAGTCAACACCCACCAAACCGATTGATAATAATGCTTGCCTGTGTTCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS TCA 90 bp | AGTGCGACACAATATAGAGAGCATCCGTGTCCTCTGGCCAGTTACTaGGACATGGTCTGTTTTTGTCCTGGAACAAGTTTGGAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SATQYREHPCPLASY*DMVCFCPGTSLEVR Trigger: CCTCACTTCCAAACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGGACACGGATGCTCTCTATATTGTGTCGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS CCA 90 bp | TCTGCTTGCGCATCTCGGCCATTTCTACACACCACTCCTCGAATTTaGAATTATCACGATCTACCAGCTCTTGAAGAAAGGCTGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: SACASRPFLHTTPRI*NYHDLPALEERLGL Trigger: AAGTCCCAGCCTTTCTTCAAGAGCTGGTAGATCGTGATAATTCCAAATTCGAGGAGTGGTGTGTAGAAATGGCCGAGATGCGCAAGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CCA 90 bp | TCCGTGTCCTCTGGCCAGTTACTGAGACATGGTCTGTTTTTGTCCTaGAACAAGTTTGGAAGTGAGGTCTTCTGCTCGTTTGCTATCATC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSGQLLRHGLFLS*NKFGSEVFCSFAII Trigger: GATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGGACACGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTCGCTCGCCCTCTCCCTCCCACCTTAAATAGAAAATCTGAAACACGTAGCGACATAAAGAGCTaGGAAAACTCTTGTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SVLARPLPPTLNRKSETRSDIKS*ENSCAS Trigger: GGATGCACAAGAGTTTTCCAAGCTCTTTATGTCGCT...ACGTGTTTCAGATTTTCTATTTAAGGTGGGAGGGAGAGGGCGAGCGAGGACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTCGCTCGCCCTCTCCCTCCCACCTTAAATAGAAAATCTGAAACACGTCAGTCTGTTAACTGCTaGTGGCCTTGGATGTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVLARPLPPTLNRKSETRQSVNC*WPWMFN Trigger: GTTAAACATCCAAGGCCACAAGCAGTTAACAGACTG...ACGTGTTTCAGATTTTCTATTTAAGGTGGGAGGGAGAGGGCGAGCGAGGACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | CCATGTTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGCACCACTCCTCGAATTaGGAATTATCACGATCTACC | + |
|
Preference number: 5 (lower is better) Translates to: PCWEFYPAAESYQKMLPMHHSSN*ELSRST Trigger: GGTAGATCGTGATAATTCCAAATTCGAGGAGTGGTG...CATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTTGAGAAGTCAGTCTTCCAGGAAGGTAGGTGTGCAGCTCTCCTGGCTCTTTGATTCATCTTTATaGAAGGTGCTCCCGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: SSLRSQSSRKVGVQLSWLFDSSL*KVLPFI Trigger: GATAAACGGGAGCACCTTCAATAAAGATGAATCAAA...GAGCCAGGAGAGCTGCACACCTACCTTCCTGGAAGACTGACTTCTCAAGGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | ACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACGGAACTCGGGAGCCTTaGGGAAGTACTGCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TTFSLMPKHVNFVFLSGHGTREP*GSTAAA Trigger: AGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCC...GTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGGACATAGATGGTGGCTaGGGTATACTCTCGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRDIDGG*GILSKV Trigger: GACCTTCGAGAGTATACCCAAGCCACCATCTATGTC...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATGCTTCACGATCTTTTAACGTCTGGTaGGCAGACACCAACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRVKDSLTASKSMSNASRSFNVW*ADTNSA Trigger: GGCACTGTTGGTGTCTGCCAACCAGACGTTAAAAGA...TCGTGAAGCATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
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| CDS TCA 90 bp | CCACAACAAAGAGCTTTTGAATCATTTGCCATTCGCTGGGCCATATaGGAGCTATATTATTATGTGCTGCAGTGGGCCAGCCTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQQRAFESFAIRWAI*ELYYYVLQWASLLL Trigger: GAGAAGGAGGCTGGCCCACTGCAGCACATAATAATATAGCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055131.13 |
||
| CDS TCA 90 bp | ATGTCTTCTGTCGCTTGGTACTTCCATTGCTCTCTGGCCAGTTACTaGGACATGGTCTGTTTTTGTCCTGGAACAAGTTTGGAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MSSVAWYFHCSLASY*DMVCFCPGTSLEVR Trigger: CCTCACTTCCAAACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGAGCAATGGAAGTACCAAGCGACAGAAGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141426.8 |
||
| CDS GCA 90 bp | ATACTGTATGTGGCAGAGCACTGCTCTCTTCCCCGAAACACATCTTaGATGGAAAGATGTGAAGTAGCCATACTGAAGGGGAGAGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: ILYVAEHCSLPRNTS*MERCEVAILKGRVT Trigger: AGTTACTCTCCCCTTCAGTATGGCTACTTCACATCTTTCCATGCAAGATGTGTTTCGGGGAAGAGAGCAGTGCTCTGCCACATACAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS CCA 90 bp | CTCGAATTTGGAATTATCACGATCTACCAGCTCTTGAAGAAAGGCTaGGACTTGAACCATTGTGTGGTTCTTTTCCTGGGCTTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LEFGIITIYQLLKKG*DLNHCVVLFLGLQP Trigger: AGGCTGCAAGCCCAGGAAAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCTTCAAGAGCTGGTAGATCGTGATAATTCCAAATTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
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| CDS CCA 90 bp | CAAAAATCTGCAGAGGCCTTTAAAGCTGCGGGCAATCAGTACCTCTaGCCAGTTACTGAGACATGGTCTGTTTTTGTCCTGGAACAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QKSAEAFKAAGNQYL*PVTETWSVFVLEQV Trigger: AACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGGTACTGATTGCCCGCAGCTTTAAAGGCCTCTGCAGATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000128065.2 |
||
| CDS CCA 90 bp | CCATTGCTCTCTGGCCAGTTACTGAGACATGGTCTGTTTTTGTCCTaGAACAAGTTTGGAAGTGAGGTCTTCTGCTCGTTTGCTATCATC | + |
|
Preference number: 5 (lower is better) Translates to: PLLSGQLLRHGLFLS*NKFGSEVFCSFAII Trigger: GATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGAGCAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141426.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACGAAGATGCTCACAAATaGTCTGAGGCTCATAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLCPALLTISEHSFFIANEDAHK*SEAHNL Trigger: AAGATTATGAGCCTCAGACAATTTGTGAGCATCTTC...GTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCAGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGGTTCTTTTCCTGGGCTaGCAGCCTATAAACCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRVLFLG*QPINQH Trigger: ATGCTGGTTTATAGGCTGCAAGCCCAGGAAAAGAAC...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | CAAATATCTGGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGCTTTCACAGTTAGTCTaGGACCTCCTCCATATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: QISGDFQMSWPWERVGSWLSQLV*DLLHID Trigger: GTCGATATGGAGGAGGTCCAAGACTAACTGTGAAAG...CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTGGTCACTCCTTGGCAGTCAGCGAGTAGTCAAAGATTAATGTCCGAGGAGCATGTCAAATGCTaGCATGACATCATCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: SFLVTPWQSASSQRLMSEEHVKC*HDIIHC Trigger: GCAATGGATGATGTCATGCAAGCATTTGACATGCTC...CTCGGACATTAATCTTTGACTACTCGCTGACTGCCAAGGAGTGACCAGAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157012.3 |
||
| CDS TCA 90 bp | GGGAGGCTCAGAAGCCGGATTTTCCGTGTAGCATTCTGTTTGCTCTaGCAGTTTTCACAGAAGTATCGATTGTCTCCTTCTAATCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRLRSRIFRVAFCLL*QFSQKYRLSPSNRS Trigger: AGAACGATTAGAAGGAGACAATCGATACTTCTGTGAAAACTGTCAGAGCAAACAGAATGCTACACGGAAAATCCGGCTTCTGAGCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CCA 90 bp | ATCAGTACCTCTGGCCAGTTACTGAGACATGGTCTGTTTTTGTCCTaGAACAAGTTTGGAAGTGAGGTCTTCTGCTCGTTTGCTATCATC | + |
|
Preference number: 5 (lower is better) Translates to: ISTSGQLLRHGLFLS*NKFGSEVFCSFAII Trigger: GATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGGTACTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128065.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGGGAACTCGGGAGCCTTaGGGAAGTACTGCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLHVHALLKDEYRLNKGWGTREP*GSTAAA Trigger: AGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCC...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTGAGGCAGCACACCCTGTATAGTCTTAAGGGTTTTCAAAAAGCAGTGAGGAGGTCTTCTGCTCGTTaGCTATCATCTTATGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVRQHTLYSLKGFQKAVRRSSAR*LSSYAR Trigger: CCTTGCATAAGATGATAGCAAACGAGCAGAAGACCT...CCTCACTGCTTTTTGAAAACCCTTAAGACTATACAGGGTGTGCTGCCTCACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGAGTTTCGAGTCTTCTTaGGTGAGGGAAGGAAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LGVLPSSRKLPKDAANVESFESS*VREGNV Trigger: TACATTTCCTTCCCTCACCAAAGAAGACTCGAAACT...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTCGCTCGCCCTCTCCCTCCCACCTTAAATAGAAAATCTGAAACACGTCACAACAAAGAGCTTTaGAATCATTTGCCATTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVLARPLPPTLNRKSETRHNKEL*NHLPFA Trigger: AGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTG...ACGTGTTTCAGATTTTCTATTTAAGGTGGGAGGGAGAGGGCGAGCGAGGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS GCA 90 bp | GAAAACTATTCTCATCTATCTCTCCTAACCAAATGTGCTCGCCAATaGCAACCAAGCAATTCGGGTTTCCTCTGCAGTTTCTTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ENYSHLSLLTKCARQ*QPSNSGFLCSFFCT Trigger: TGTGCAGAAGAAACTGCAGAGGAAACCCGAATTGCTTGGTTGGCATTGGCGAGCACATTTGGTTAGGAGAGATAGATGAGAATAGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGTCCAGCAGGCAACCTTaGGTACAGCTCCTTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLHVHALLKDEYRLNKGWSSRQP*VQLLHL Trigger: GAGGTGAAGGAGCTGTACCAAAGGTTGCCTGCTGGA...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | CAAATATCTGGTGACTTTCAAATGTCTTGGCCTTGGGAAAGAGTGGGCTCTTGGAGACATGGTCTGTTTTaGTCCTGGAACAAGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QISGDFQMSWPWERVGSWRHGLF*SWNKFG Trigger: TCCAAACTTGTTCCAGGACAAAAACAGACCATGTCT...CCAAGAGCCCACTCTTTCCCAAGGCCAAGACATTTGAAAGTCACCAGATATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTAACATTTCGTAAAGGAAACAAAGGATGCCTATGCAACCAACCTCACAGTGACATAGATGGTGGCTaGGGTATACTCTCGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLTFRKGNKGCLCNQPHSDIDGG*GILSKV Trigger: GACCTTCGAGAGTATACCCAAGCCACCATCTATGTC...ACTGTGAGGTTGGTTGCATAGGCATCCTTTGTTTCCTTTACGAAATGTTAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATCAGCGTAGTCTGCAATaGGTTCATCAGCCTTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: CPALLTISEHSFFIANINQRSLQ*VHQPLT Trigger: TGTTAAAGGCTGATGAACCAATTGCAGACTACGCTG...ATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS TCA 90 bp | GTTACTGAGACATGGTCTGTTTTTGTCCTGGAACAAGTTTGGAAGTaGGGTCTTCTGCTCGTTTGCTATCATCTTATGCAAGGCTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: VTETWSVFVLEQVWK*GLLLVCYHLMQGFV Trigger: AACGAAGCCTTGCATAAGATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 ENSMUST00000141426.8 |
||
| CDS TCA 90 bp | CCCAAAATCCATCACTGCCCTTCATTGTCGATTTCAGCAAATTGTTaGCAGCTTTGTAATCTTCATTCAGCTGATTCTTCAGGCGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PKIHHCPSLSISANC*QLCNLHSADSSGAG Trigger: TCCTGCGCCTGAAGAATCAGCTGAATGAAGATTACAAAGCTGTCAACAATTTGCTGAAATCGACAATGAAGGGCAGTGATGGATTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105838.8 ENSMUST00000105840.8 |
||
| CDS GCA 90 bp | CATGGTCTGTTTTTGTCCTGGAACAAGTTTGGAAGTGAGGTCTTCTaGTCGTTTGCTATCATCTTATGCAAGGCTTCGTTTTCTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: HGLFLSWNKFGSEVF*SFAIILCKASFSSP Trigger: AGGTGAAGAAAACGAAGCCTTGCATAAGATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACAAAAACAGACCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGTCGGTTTGGTGGGTGTaGACTCGTCCAACCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLHVHALLKDEYRLNKGWSVWWV*TRPTTS Trigger: AGAAGTGGTTGGACGAGTCAACACCCACCAAACCGA...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGAGTTCTACCCAGCAGCAGAAAGCTACCAAAAGATGCTGCCAATGTTGAGTTTGATTCATCTTTATaGAAGGTGCTCCCGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: LGVLPSSRKLPKDAANVEFDSSL*KVLPFI Trigger: GATAAACGGGAGCACCTTCAATAAAGATGAATCAAA...CTCAACATTGGCAGCATCTTTTGGTAGCTTTCTGCTGCTGGGTAGAACTCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | CTACACAAGCTCTCTAGTGACTCAGTTCTATCACCAGCTCTTAGACATACTGCTAGTTTCGAGTCTTCTTaGGTGAGGGAAGGAAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHKLSSDSVLSPALRHTASFESS*VREGNV Trigger: TACATTTCCTTCCCTCACCAAAGAAGACTCGAAACT...AGCAGTATGTCTAAGAGCTGGTGATAGAACTGAGTCACTAGAGAGCTTGTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131755.2 |
||
| CDS TCA 90 bp | CTACCCAAAATCCATCACCCTTCATTGTCGATTTCAGCAAATTGTTaGCAGCTTTGTAATCTTCATTCAGCTGATTCTTCAGGCGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPKIHHPSLSISANC*QLCNLHSADSSGAG Trigger: TCCTGCGCCTGAAGAATCAGCTGAATGAAGATTACAAAGCTGTCAACAATTTGCTGAAATCGACAATGAAGGGTGATGGATTTTGGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105837.2 ENSMUST00000105839.8 |
||
| CDS GCA 90 bp | AACAAGTTTGGAAGTGAGGTCTTCTGCTCGTTTGCTATCATCTTATaGAAGGCTTCGTTTTCTTCACCTTCTCGTTCTAGTATCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NKFGSEVFCSFAIIL*KASFSSPSRSSILH Trigger: GTGCAAGATACTAGAACGAGAAGGTGAAGAAAACGAAGCCTTGCATAAGATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGCATTGAGCTTCTTCTaGTGTCCAGTTTGCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFFNAQTCQFRLPFWSLLALSFF*CPVCLS Trigger: TGACAGGCAAACTGGACACAAGAAGAAGCTCAATGC...AAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTTCGGTTTGGTGGGTGTaGACTCGTCCAACCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSSVWWV*TRPTTS Trigger: AGAAGTGGTTGGACGAGTCAACACCCACCAAACCGA...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCCGCGCTTCTCACCATCTCAGAACACTCTTTCTTCATTGCAAACATAAATAGAAATATACTGTGTTaGAGAAGGATTCACGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPALLTISEHSFFIANINRNILC*RRIHVS Trigger: GGAGACGTGAATCCTTCTCAAACACAGTATATTTCT...ATTTATGTTTGCAATGAAGAAAGAGTGTTCTGAGATGGTGAGAAGCGCGGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | GAAAAGAATTCCAGAGTGAAAGACAGTCTGACAGCTAGCAAGAGCATGTCAAATCAGCGTAGTCTGCAATaGGTTCATCAGCCTTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: EKNSRVKDSLTASKSMSNQRSLQ*VHQPLT Trigger: TGTTAAAGGCTGATGAACCAATTGCAGACTACGCTG...ATTTGACATGCTCTTGCTAGCTGTCAGACTGTCTTTCACTCTGGAATTCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151807.8 |
||
| CDS-3UTR CAA 90 bp | ACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACCAGCGTAGTCTGCAATaGGTTCATCAGCCTTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: TTFSLMPKHVNFVFLSGHQRSLQ*VHQPLT Trigger: TGTTAAAGGCTGATGAACCAATTGCAGACTACGCTG...GTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000157012.3 |
||
| CDS-3UTR CAA 90 bp | ACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTCCGGCATACAAACTaGCATGACATCATCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: TFSLMPKHVNFVFLSGHSFRHTN*HDIIHC Trigger: GCAATGGATGATGTCATGCAAGTTTGTATGCCGGAA...GGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTGAGCGACATAAAGAGCTaGGAAAACTCTTGTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FSLMPKHVNFVFLSGHSLSDIKS*ENSCAS Trigger: GGATGCACAAGAGTTTTCCAAGCTCTTTATGTCGCT...CAAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACACCACTCCTCGAATTaGGAATTATCACGATCTACC | + |
|
Preference number: 5 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSHHSSN*ELSRST Trigger: GGTAGATCGTGATAATTCCAAATTCGAGGAGTGGTG...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | ACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTCATCACCTTTTaGTTATCCACAACCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TTFSLMPKHVNFVFLSGHSFITF*LSTTLW Trigger: CCACAAGGTTGTGGATAACAAAAAGGTGATGAAGGA...GTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACTCCTTCAGCGTAGTCTGCAATaGGTTCATCAGCCTTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: VFFNAQTCQFRLPFWSLLQRSLQ*VHQPLT Trigger: TGTTAAAGGCTGATGAACCAATTGCAGACTACGCTG...AAGGAGTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000157012.3 |
||
| CDS-3UTR CAA 90 bp | AACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCATTCCGGCATACAAACTaGCATGACATCATCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: NHVFFNAQTCQFRLPFWSFRHTN*HDIIHC Trigger: GCAATGGATGATGTCATGCAAGTTTGTATGCCGGAA...TGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS TCA 90 bp | AAGGAATTCTTTTTCCTCCTCTCACAGTTGGGATCATCAATGCTATaGAAACTATTCTCATCTATCTCTCCTAACCAAATGTGCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KEFFFLLSQLGSSML*KLFSSISPNQMCSP Trigger: TGGCGAGCACATTTGGTTAGGAGAGATAGATGAGAATAGTTTTCATAGCATTGATGATCCCAACTGTGAGAGGAGGAAAAAGAATTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGCAGTCTGTTAACTGCTaGTGGCCTTGGATGTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLHVHALLKDEYRLNKGWQSVNC*WPWMFN Trigger: GTTAAACATCCAAGGCCACAAGCAGTTAACAGACTG...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | ACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTGGTCACAGAAATATACTGTGTTaGAGAAGGATTCACGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTFSLMPKHVNFVFLSGHRNILC*RRIHVS Trigger: GGAGACGTGAATCCTTCTCAAACACAGTATATTTCT...GTGACCAGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS TCA 90 bp | GCCGCATATTCCGATATTCTCTTCATAATTGATATTTTATCAGGATaGAGCTTGTCGTGGGAACACAGGCAAGCATTATTATCAATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAYSDILFIIDILSG*SLSWEHRQALLSIG Trigger: ACCGATTGATAATAATGCTTGCCTGTGTTCCCACGACAAGCTTCATCCTGATAAAATATCAATTATGAAGAGAATATCGGAATATGCGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS GCA 90 bp | CCACAAAGGAATTCTTTTTCCTCCTCTCACAGTTGGGATCATCAATaGTATGAAAACTATTCTCATCTATCTCTCCTAACCAAATGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQRNSFSSSHSWDHQ*YENYSHLSLLTKCA Trigger: AGCACATTTGGTTAGGAGAGATAGATGAGAATAGTTTTCATAGCATTGATGATCCCAACTGTGAGAGGAGGAAAAAGAATTCCTTTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAACCACGTTTTCTTTAATGCCCAAACATGTCAATTTCGTCTTCCTTTCTAGGTCTTCTGCTCGTTaGCTATCATCTTATGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKTTFSLMPKHVNFVFLSRSSAR*LSSYAR Trigger: CCTTGCATAAGATGATAGCAAACGAGCAGAAGACCT...AGAAAGGAAGACGAAATTGACATGTTTGGGCATTAAAGAAAACGTGGTTTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS TCA 90 bp | ACTATAGAAAATGTTAGCCGCATATTCCGATATTCTCTTCATAATTaGTATTTTATCAGGATGAAGCTTGTCGTGGGAACACAGGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TIENVSRIFRYSLHN*YFIRMKLVVGTQAS Trigger: GCTTGCCTGTGTTCCCACGACAAGCTTCATCCTGATAAAATATCAATTATGAAGAGAATATCGGAATATGCGGCTAACATTTTCTATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCACGTTCATGCTTTATTGAAAGATGAGTATAGGTTAAATAAAGGCTGGGGTACTTCCATTGCTTaGATTAAAGTCAGGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLHVHALLKDEYRLNKGWGTSIA*IKVRIL Trigger: AAGGATCCTGACTTTAATCAAAGCAATGGAAGTACC...CCAGCCTTTATTTAACCTATACTCATCTTTCAATAAAGCATGAACGTGAAGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS TCA 90 bp | TCAATTCTTGTGATTTTAATTACTTTATCCACAACAAAGAGCTTTTaGATCATTTGCCATTCGCTGGGCCATATGAGAGAGTTTCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SILVILITLSTTKSF*IICHSLGHMREFRV Trigger: GACTCGAAACTCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTGGATAAAGTAATTAAAATCACAAGAATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141628.8 |
||
| CDS CAA 90 bp | CAGCGCCAGGCCGCCTTCTCCAGCTGCAGCCGCGGAGCCATAGCCTaGACCGAGGTAGCACTCGCCGAGCCCGGTGGCCTCCGGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QRQAAFSSCSRGAIA*TEVALAEPGGLRRR Trigger: GCGGCGCCGGAGGCCACCGGGCTCGGCGAGTGCTACCTCGGTCAAGGCTATGGCTCCGCGGCTGCAGCTGGAGAAGGCGGCCTGGCGCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153100.8 |
||
| CDS TCA 72 bp | CTCCCCGAACCTTCCTGTGCCTCGTGCTCCTCCGGATaGCCTGCTTCTGGTAGGCCACATAGCCCTGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPEPSCASCSSG*PASGRPHSPVG Trigger: CCCAACAGGGCTATGTGGCCTACCAGAAGCAGGTCATCCGGAGGAGCACGAGGCACAGGAAGGTTCGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141426.8 ENSMUST00000141628.8 ENSMUST00000151807.8 |
||
| CDS GCA 72 bp | TTCTGCACACGCCTCGGATACAAGGCTCCAGCCAGATaGGGTAGGCGGTCTCGATGTGCTCCTGCGACACCT | + |
|
Preference number: 6 (lower is better) Translates to: FCTRLGYKAPAR*GRRSRCAPATP Trigger: AGGTGTCGCAGGAGCACATCGAGACCGCCTACCGCATCTGGCTGGAGCCTTGTATCCGAGGCGTGTGCAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
||
| CDS GCA 72 bp | CATGGATCCCATCTCCCTTCGTGTAATCACTGCAGGTaGTGGGGCATAAGTACAGCGCCTGCCGAAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HGSHLPSCNHCR*WGISTAPAEAP Trigger: TGGAGCTTCGGCAGGCGCTGTACTTATGCCCCAGCACCTGCAGTGATTACACGAAGGGAGATGGGATCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
||
| CDS CCA 72 bp | GGATCCCATCTCCCTTCGTGTAATCACTGCAGGTGCTaGGGCATAAGTACAGCGCCTGCCGAAGCTCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSHLPSCNHCRC*GISTAPAEAPS Trigger: ACTTGGAGCTTCGGCAGGCGCTGTACTTATGCCCCAGCACCTGCAGTGATTACACGAAGGGAGATGGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
||
| CDS CCA 72 bp | GCAGCACTCTCTGTAACTTGGGAACTCGGGAGCCTTTaGGAAGTACTGCTGCAGCTTGCTCCAAGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AALSVTWELGSL*EVLLQLAPSLL Trigger: CAGGAGGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCCCAAGTTACAGAGAGTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
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| CDS CAA 90 bp | TGCACTGCGAGCAGCACTCTCTGTAACTTGGGAACTCGGGAGCCTTaGGGAAGTACTGCTGCAGCTTGCTCCAAGCCTCCTGAGAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: CTASSTLCNLGTREP*GSTAAACSKPPEKP Trigger: TGGTTTCTCAGGAGGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCCCAAGTTACAGAGAGTGCTGCTCGCAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS GCA 72 bp | CCTCGTGCTTCGCTTTGCCTTTGTCCACACTCTGCTTaGGCATCTCGGCCATTTCTACACACCACTCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PRASLCLCPHSA*ASRPFLHTTPR Trigger: TCGAGGAGTGGTGTGTAGAAATGGCCGAGATGCGCAAGCAGAGTGTGGACAAAGGCAAAGCGAAGCACGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 72 bp | TCCTCGTGCTTCGCTTTGCCTTTGTCCACACTCTGCTaGCGCATCTCGGCCATTTCTACACACCACTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSCFALPLSTLC*RISAISTHHSS Trigger: CGAGGAGTGGTGTGTAGAAATGGCCGAGATGCGCAAGCAGAGTGTGGACAAAGGCAAAGCGAAGCACGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 72 bp | AGCAGCACTCTCTGTAACTTGGGAACTCGGGAGCCTTaGGGAAGTACTGCTGCAGCTTGCTCCAAGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSTLCNLGTREP*GSTAAACSKPP Trigger: AGGAGGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCCCAAGTTACAGAGAGTGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS GCA 72 bp | GCTCGCCAATGCCAACCAAGCAATTCGGGTTTCCTCTaGAGTTTCTTCTGCACACGCCTCGGATACAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARQCQPSNSGFL*SFFCTRLGYKA Trigger: AGCCTTGTATCCGAGGCGTGTGCAGAAGAAACTGCAGAGGAAACCCGAATTGCTTGGTTGGCATTGGCGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
||
| CDS GCA 72 bp | TGTCCAGTTTGCCTGTCAAACACGAAACGCATCAGCTaGAAGTTCAGAGTGCAAGGGAGGCTCAGAAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CPVCLSNTKRIS*KFRVQGRLRSR Trigger: CCGGCTTCTGAGCCTCCCTTGCACTCTGAACTTGCAGCTGATGCGTTTCGTGTTTGACAGGCAAACTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS GCA 72 bp | GGAACTCGGGAGCCTTTGGGAAGTACTGCTGCAGCTTaGTCCAAGCCTCCTGAGAAACCAGCCTTCTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GTREPLGSTAAA*SKPPEKPAFFH Trigger: ATGAAAGAAGGCTGGTTTCTCAGGAGGCTTGGAGCAAGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS CAA 90 bp | CTTCTCGTTCTAGTATCTTGCACTGCGAGCAGCACTCTCTGTAACTaGGGAACTCGGGAGCCTTTGGGAAGTACTGCTGCAGCTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLVLVSCTASSTLCN*GTREPLGSTAAACS Trigger: GGAGCAAGCTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCCCAAGTTACAGAGAGTGCTGCTCGCAGTGCAAGATACTAGAACGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS TCA 72 bp | TCCTCCATGTGGACACAGAAGGGCAGCATTCCCAATTaGCGACACAGGAGCAGACCTTGCAGGCTTTCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSMWTQKGSIPN*RHRSRPCRLSN Trigger: GTTAGAAAGCCTGCAAGGTCTGCTCCTGTGTCGTCAATTGGGAATGCTGCCCTTCTGTGTCCACATGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000131755.2 ENSMUST00000141628.8 |
||
| CDS GCA 72 bp | CTTGTACCATTCTCCAGACTGAGGGTCTTTCACGTGTaGGATGTAGTGGCCAGAATAGGCGCTGACTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVPFSRLRVFHV*DVVARIGADSS Trigger: AGAGGAGTCAGCGCCTATTCTGGCCACTACATCGCACACGTGAAAGACCCTCAGTCTGGAGAATGGTACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 72 bp | CTAGTATCTTGCACTGCGAGCAGCACTCTCTGTAACTaGGGAACTCGGGAGCCTTTGGGAAGTACTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LVSCTASSTLCN*GTREPLGSTAA Trigger: TGCAGCAGTACTTCCCAAAGGCTCCCGAGTTCCCAAGTTACAGAGAGTGCTGCTCGCAGTGCAAGATACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS CAA 90 bp | TCCTTCACCTCCTCGTGCTTCGCTTTGCCTTTGTCCACACTCTGCTaGCGCATCTCGGCCATTTCTACACACCACTCCTCGAATTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SFTSSCFALPLSTLC*RISAISTHHSSNLE Trigger: TTCCAAATTCGAGGAGTGGTGTGTAGAAATGGCCGAGATGCGCAAGCAGAGTGTGGACAAAGGCAAAGCGAAGCACGAGGAGGTGAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 90 bp | CATCACCTTTTTGTTATCCACAACCTTGTGGACATAGATGGTGGCTaGGGTATACTCTCGAAGGTCCCTCTGCTGCTGGCACAGCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: HHLFVIHNLVDIDGG*GILSKVPLLLAQQT Trigger: GGTCTGCTGTGCCAGCAGCAGAGGGACCTTCGAGAGTATACCCAAGCCACCATCTATGTCCACAAGGTTGTGGATAACAAAAAGGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141628.8 |
||
| CDS CCA 72 bp | CGTGGGAACACAGGCAAGCATTATTATCAATCGGTTTaGTGGGTGTTGACTCGTCCAACCACTTCTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGNTGKHYYQSV*WVLTRPTTSAA Trigger: GGCTGCAGAAGTGGTTGGACGAGTCAACACCCACCAAACCGATTGATAATAATGCTTGCCTGTGTTCCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CCA 72 bp | GCAGAGGCCTTTAAAGCTGCGGGCAATCAGTACCTCTaGCCAGTTACTGAGACATGGTCTGTTTTTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AEAFKAAGNQYL*PVTETWSVFVL Trigger: CAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGGTACTGATTGCCCGCAGCTTTAAAGGCCTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128065.2 |
||
| CDS CAA 72 bp | TCGTGGGAACACAGGCAAGCATTATTATCAATCGGTTaGGTGGGTGTTGACTCGTCCAACCACTTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SWEHRQALLSIG*VGVDSSNHFCS Trigger: GCTGCAGAAGTGGTTGGACGAGTCAACACCCACCAAACCGATTGATAATAATGCTTGCCTGTGTTCCCACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 72 bp | TTTGTTATCCACAACCTTGTGGACATAGATGGTGGCTaGGGTATACTCTCGAAGGTCCCTCTGCTGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FVIHNLVDIDGG*GILSKVPLLLA Trigger: TGCCAGCAGCAGAGGGACCTTCGAGAGTATACCCAAGCCACCATCTATGTCCACAAGGTTGTGGATAACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141628.8 |
||
| CDS CCA 72 bp | GGGAACACAGGCAAGCATTATTATCAATCGGTTTGGTaGGTGTTGACTCGTCCAACCACTTCTGCAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: GNTGKHYYQSVW*VLTRPTTSAAI Trigger: AATGGCTGCAGAAGTGGTTGGACGAGTCAACACCCACCAAACCGATTGATAATAATGCTTGCCTGTGTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CCA 72 bp | GAAGTGCGACACAATATAGAGAGCATCCGTGTCCTCTaGCCAGTTACTGAGACATGGTCTGTTTTTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EVRHNIESIRVL*PVTETWSVFVL Trigger: CAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGGACACGGATGCTCTCTATATTGTGTCGCACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS CCA 72 bp | CCTCTGCTGCTGGCACAGCAGACCTTCTCTGCAATCTaGACAGAGACTAGGTTCAGAAATATACTGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLLLAQQTFSAI*TETRFRNILCL Trigger: CAAACACAGTATATTTCTGAACCTAGTCTCTGTCCAGATTGCAGAGAAGGTCTGCTGTGCCAGCAGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141628.8 |
||
| CDS CCA 72 bp | CCTTTTTGTTATCCACAACCTTGTGGACATAGATGGTaGCTTGGGTATACTCTCGAAGGTCCCTCTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PFCYPQPCGHRW*LGYTLEGPSAA Trigger: AGCAGCAGAGGGACCTTCGAGAGTATACCCAAGCCACCATCTATGTCCACAAGGTTGTGGATAACAAAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141628.8 |
||
| CDS CCA 72 bp | GGATGTCTTCTGTCGCTTGGTACTTCCATTGCTCTCTaGCCAGTTACTGAGACATGGTCTGTTTTTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GCLLSLGTSIAL*PVTETWSVFVL Trigger: CAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGAGCAATGGAAGTACCAAGCGACAGAAGACATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141426.8 |
||
| CDS CCA 72 bp | CCCAATTGTGGGTCTAGGCTCCTTAACTCAAAGAAATaGCATACTGTATGTGGCAGAGCACTGCTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PNCGSRLLNSKK*HTVCGRALLSS Trigger: GGAAGAGAGCAGTGCTCTGCCACATACAGTATGCCATTTCTTTGAGTTAAGGAGCCTAGACCCACAATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS CAA 72 bp | ATCACGATCTACCAGCTCTTGAAGAAAGGCTGGGACTaGAACCATTGTGTGGTTCTTTTCCTGGGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ITIYQLLKKGWD*NHCVVLFLGLQ Trigger: CTGCAAGCCCAGGAAAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCTTCAAGAGCTGGTAGATCGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 90 bp | AAGAAAGGCTGGGACTTGAACCATTGTGTGGTTCTTTTCCTGGGCTaGCAGCCTATAAACCAGCATGTATGCATTTCGGGAGCAGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KKGWDLNHCVVLFLG*QPINQHVCISGAVS Trigger: ACTCACTGCTCCCGAAATGCATACATGCTGGTTTATAGGCTGCAAGCCCAGGAAAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 90 bp | CGTGGGAACACAGGCAAGCATTATTATCAATCGGTTTGGTGGGTGTaGACTCGTCCAACCACTTCTGCAGCCATTCAAGAGAGACAAACT | + |
|
Preference number: 6 (lower is better) Translates to: RGNTGKHYYQSVWWV*TRPTTSAAIQERQT Trigger: AGTTTGTCTCTCTTGAATGGCTGCAGAAGTGGTTGGACGAGTCAACACCCACCAAACCGATTGATAATAATGCTTGCCTGTGTTCCCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 90 bp | TATCACGATCTACCAGCTCTTGAAGAAAGGCTGGGACTTGAACCATaGTGTGGTTCTTTTCCTGGGCTTGCAGCCTATAAACCAGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: YHDLPALEERLGLEP*CGSFPGLAAYKPAC Trigger: ACATGCTGGTTTATAGGCTGCAAGCCCAGGAAAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCTTCAAGAGCTGGTAGATCGTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS TCA 72 bp | GCTTCTTGCCCTCCATCTTCTCTATGTCCTCGTCATTaGACTTGTACCATTCTCCAGACTGAGGGTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASCPPSSLCPRH*TCTILQTEGLS Trigger: TGAAAGACCCTCAGTCTGGAGAATGGTACAAGTTCAATGACGAGGACATAGAGAAGATGGAGGGCAAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS TCA 72 bp | CAGGCAAGCATTATTATCAATCGGTTTGGTGGGTGTTaGCTCGTCCAACCACTTCTGCAGCCATTCAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QASIIINRFGGC*LVQPLLQPFKR Trigger: TCTCTTGAATGGCTGCAGAAGTGGTTGGACGAGTCAACACCCACCAAACCGATTGATAATAATGCTTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS TCA 72 bp | GTCGCTTGGTACTTCCATTGCTCTCTGGCCAGTTACTaGGACATGGTCTGTTTTTGTCCTGGAACAAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VAWYFHCSLASY*DMVCFCPGTSL Trigger: CAAACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGAGCAATGGAAGTACCAAGCGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141426.8 |
||
| CDS GCA 72 bp | TCTCATCTATCTCTCCTAACCAAATGTGCTCGCCAATaGCAACCAAGCAATTCGGGTTTCCTCTGCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SHLSLLTKCARQ*QPSNSGFLCSF Trigger: GAAACTGCAGAGGAAACCCGAATTGCTTGGTTGGCATTGGCGAGCACATTTGGTTAGGAGAGATAGATGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
||
| CDS GCA 72 bp | CCGATGTATGCATTGAGCTTCTTCTTGTGTCCAGTTTaGCTGTCAAACACGAAACGCATCAGCTGCAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PMYALSFFLCPV*LSNTKRISCKF Trigger: GAACTTGCAGCTGATGCGTTTCGTGTTTGACAGGCAAACTGGACACAAGAAGAAGCTCAATGCATACATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS GCA 72 bp | TTATTGAAGGTGCTCCCGTTTATCTTCCCGTTGCTTTaGTCCGCCTCACCATCTTGCTCATCTAGTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLKVLPFIFPLL*SASPSCSSSCS Trigger: TGAACAACTAGATGAGCAAGATGGTGAGGCGGAGCAAAGCAACGGGAAGATAAACGGGAGCACCTTCAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055131.13 ENSMUST00000105837.2 ENSMUST00000105838.8 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS CCA 72 bp | GGAATTATCACGATCTACCAGCTCTTGAAGAAAGGCTaGGACTTGAACCATTGTGTGGTTCTTTTCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GIITIYQLLKKG*DLNHCVVLFLG Trigger: GCCCAGGAAAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCTTCAAGAGCTGGTAGATCGTGATAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CCA 72 bp | TCACCTTTTTGTTATCCACAACCTTGTGGACATAGATaGTGGCTTGGGTATACTCTCGAAGGTCCCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPFCYPQPCGHR*WLGYTLEGPSA Trigger: AGCAGAGGGACCTTCGAGAGTATACCCAAGCCACCATCTATGTCCACAAGGTTGTGGATAACAAAAAGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141628.8 |
||
| CDS CAA 72 bp | CTCTCTGAGAAGCCGATGTATGCATTGAGCTTCTTCTaGTGTCCAGTTTGCCTGTCAAACACGAAACGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LSEKPMYALSFF*CPVCLSNTKRI Trigger: GATGCGTTTCGTGTTTGACAGGCAAACTGGACACAAGAAGAAGCTCAATGCATACATCGGCTTCTCAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 72 bp | CTACCAGCTCTTGAAGAAAGGCTGGGACTTGAACCATaGTGTGGTTCTTTTCCTGGGCTTGCAGCCTATAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPALEERLGLEP*CGSFPGLAAYK Trigger: TTTATAGGCTGCAAGCCCAGGAAAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCTTCAAGAGCTGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 72 bp | ACAGGCAAGCATTATTATCAATCGGTTTGGTGGGTGTaGACTCGTCCAACCACTTCTGCAGCCATTCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGKHYYQSVWWV*TRPTTSAAIQE Trigger: CTCTTGAATGGCTGCAGAAGTGGTTGGACGAGTCAACACCCACCAAACCGATTGATAATAATGCTTGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 90 bp | TTCTTCTGTTTAGACAAAGTGTCTTCCAACAGCGACATAAAGAGCTaGGAAAACTCTTGTGCATCCTGCTGCTGCCCAGTATCTAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FFCLDKVSSNSDIKS*ENSCASCCCPVSKP Trigger: GGGCTTAGATACTGGGCAGCAGCAGGATGCACAAGAGTTTTCCAAGCTCTTTATGTCGCTGTTGGAAGACACTTTGTCTAAACAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 90 bp | ATATCTAGACTCTCTGAGAAGCCGATGTATGCATTGAGCTTCTTCTaGTGTCCAGTTTGCCTGTCAAACACGAAACGCATCAGCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ISRLSEKPMYALSFF*CPVCLSNTKRISCK Trigger: CTTGCAGCTGATGCGTTTCGTGTTTGACAGGCAAACTGGACACAAGAAGAAGCTCAATGCATACATCGGCTTCTCAGAGAGTCTAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS TCA 72 bp | CAATATAGAGAGCATCCGTGTCCTCTGGCCAGTTACTaGGACATGGTCTGTTTTTGTCCTGGAACAAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QYREHPCPLASY*DMVCFCPGTSL Trigger: CAAACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGAGGACACGGATGCTCTCTATATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 |
||
| CDS TCA 72 bp | AGAGCTTTTGAATCATTTGCCATTCGCTGGGCCATATaGGAGCTATATTATTATGTGCTGCAGTGGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAFESFAIRWAI*ELYYYVLQWAS Trigger: GCTGGCCCACTGCAGCACATAATAATATAGCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055131.13 |
||
| CDS TCA 72 bp | TGGGATGTCTTCTGTCGCTTGGTACTTCCATTGCTTTaGTTAAAGTCAGGATCCTTCTCCCCATCTGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: WDVFCRLVLPLL*LKSGSFSPSGL Trigger: TAAGCCAGATGGGGAGAAGGATCCTGACTTTAATCAAAGCAATGGAAGTACCAAGCGACAGAAGACATCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000141628.8 |
||
| CDS TCA 72 bp | AGAGCTTTTGAATCATTTGCCATTCGCTGGGCCATATaGGAGAGTTTCGAGTCTTCTTTGGTGAGGGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RAFESFAIRWAI*ESFESSLVREG Trigger: TCCTTCCCTCACCAAAGAAGACTCGAAACTCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141628.8 |
||
| CDS CCA 72 bp | GCATCTCGGCCATTTCTACACACCACTCCTCGAATTTaGAATTATCACGATCTACCAGCTCTTGAAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASRPFLHTTPRI*NYHDLPALEER Trigger: CCTTTCTTCAAGAGCTGGTAGATCGTGATAATTCCAAATTCGAGGAGTGGTGTGTAGAAATGGCCGAGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CCA 72 bp | TCTGGCCAGTTACTGAGACATGGTCTGTTTTTGTCCTaGAACAAGTTTGGAAGTGAGGTCTTCTGCTCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGQLLRHGLFLS*NKFGSEVFCSF Trigger: AAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACAAAAACAGACCATGTCTCAGTAACTGGCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 ENSMUST00000141426.8 |
||
| CDS CAA 72 bp | TTAGACAAAGTGTCTTCCAACAGCGACATAAAGAGCTaGGAAAACTCTTGTGCATCCTGCTGCTGCCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LDKVSSNSDIKS*ENSCASCCCPV Trigger: TACTGGGCAGCAGCAGGATGCACAAGAGTTTTCCAAGCTCTTTATGTCGCTGTTGGAAGACACTTTGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 90 bp | TTTGGAATTATCACGATCTACCAGCTCTTGAAGAAAGGCTGGGACTaGAACCATTGTGTGGTTCTTTTCCTGGGCTTGCAGCCTATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: FGIITIYQLLKKGWD*NHCVVLFLGLQPIN Trigger: GTTTATAGGCTGCAAGCCCAGGAAAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCTTCAAGAGCTGGTAGATCGTGATAATTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 90 bp | TACACACCACTCCTCGAATTTGGAATTATCACGATCTACCAGCTCTaGAAGAAAGGCTGGGACTTGAACCATTGTGTGGTTCTTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: YTPLLEFGIITIYQL*KKGWDLNHCVVLFL Trigger: CAGGAAAAGAACCACACAATGGTTCAAGTCCCAGCCTTTCTTCAAGAGCTGGTAGATCGTGATAATTCCAAATTCGAGGAGTGGTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 90 bp | TTAGAAGGTTCTGCTAGATCTTCCTCAATCCCTAGCTGTAGCTTCTaGCCCTCCATCTTCTCTATGTCCTCGTCATTGAACTTGTACCAT | + |
|
Preference number: 6 (lower is better) Translates to: LEGSARSSSIPSCSF*PSIFSMSSSLNLYH Trigger: ATGGTACAAGTTCAATGACGAGGACATAGAGAAGATGGAGGGCAAGAAGCTACAGCTAGGGATTGAGGAAGATCTAGCAGAACCTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS TCA 72 bp | CTCTCTTCCCCGAAACACATCTTGCATGGAAAGATGTaGAGTAGCCATACTGAAGGGGAGAGTAACTTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSSPKHILHGKM*SSHTEGESNFN Trigger: GTTAAAGTTACTCTCCCCTTCAGTATGGCTACTTCACATCTTTCCATGCAAGATGTGTTTCGGGGAAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153869.2 |
||
| CDS GCA 72 bp | CTCCTTCTAATCGTTCTTCCTTCAGGAACTCTGAGATaGAGTCTGTTAACTGCTTGTGGCCTTGGATGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LLLIVLPSGTLR*SLLTACGLGCL Trigger: TAAACATCCAAGGCCACAAGCAGTTAACAGACTGCATCTCAGAGTTCCTGAAGGAAGAACGATTAGAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS GCA 72 bp | GGAAGTGAGGTCTTCTGCTCGTTTGCTATCATCTTATaGAAGGCTTCGTTTTCTTCACCTTCTCGTTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSEVFCSFAIIL*KASFSSPSRSS Trigger: ACTAGAACGAGAAGGTGAAGAAAACGAAGCCTTGCATAAGATGATAGCAAACGAGCAGAAGACCTCACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS CAA 72 bp | CCTGGAACAAGTTTGGAAGTGAGGTCTTCTGCTCGTTaGCTATCATCTTATGCAAGGCTTCGTTTTCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGTSLEVRSSAR*LSSYARLRFLH Trigger: GTGAAGAAAACGAAGCCTTGCATAAGATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
||
| CDS CAA 90 bp | GATTTAGAAGGTTCTAGATCTTCCTCAATCCCTAGCTGTAGCTTCTaGCCCTCCATCTTCTCTATGTCCTCGTCATTGAACTTGTACCAT | + |
|
Preference number: 6 (lower is better) Translates to: DLEGSRSSSIPSCSF*PSIFSMSSSLNLYH Trigger: ATGGTACAAGTTCAATGACGAGGACATAGAGAAGATGGAGGGCAAGAAGCTACAGCTAGGGATTGAGGAAGATCTAGAACCTTCTAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055131.13 |
||
| CDS TCA 72 bp | AGAAGCCGGATTTTCCGTGTAGCATTCTGTTTGCTCTaGCAGTTTTCACAGAAGTATCGATTGTCTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSRIFRVAFCLL*QFSQKYRLSPS Trigger: AGAAGGAGACAATCGATACTTCTGTGAAAACTGTCAGAGCAAACAGAATGCTACACGGAAAATCCGGCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
||
| CDS CAA 72 bp | GCAACAAAGCAAACAAGTACTGAAGATGCTCACAAATaGTCTGAGGCTCATAATCTTTTCCCCCATGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: ATKQTSTEDAHK*SEAHNLFPHGS Trigger: GGATCCATGGGGGAAAAGATTATGAGCCTCAGACAATTTGTGAGCATCTTCAGTACTTGTTTGCTTTGTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
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| CDS CAA 90 bp | TGTTTTTGTCCTGGAACAAGTTTGGAAGTGAGGTCTTCTGCTCGTTaGCTATCATCTTATGCAAGGCTTCGTTTTCTTCACCTTCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: CFCPGTSLEVRSSAR*LSSYARLRFLHLLV Trigger: AACGAGAAGGTGAAGAAAACGAAGCCTTGCATAAGATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACAAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 |
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| CDS TCA 72 bp | ACATGGTCTGTTTTTGTCCTGGAACAAGTTTGGAAGTaGGGTCTTCTGCTCGTTTGCTATCATCTTATGCAA | + |
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Preference number: 6 (lower is better) Translates to: TWSVFVLEQVWK*GLLLVCYHLMQ Trigger: TTGCATAAGATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACAAAAACAGACCATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 ENSMUST00000141426.8 |
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| CDS GCA 72 bp | TTTTTGTCCTGGAACAAGTTTGGAAGTGAGGTCTTCTaGTCGTTTGCTATCATCTTATGCAAGGCTTCGTTT | + |
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Preference number: 6 (lower is better) Translates to: FLSWNKFGSEVF*SFAIILCKASF Trigger: AAACGAAGCCTTGCATAAGATGATAGCAAACGAGCAGAAGACCTCACTTCCAAACTTGTTCCAGGACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105840.8 ENSMUST00000128065.2 ENSMUST00000141426.8 |
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| CDS TCA 72 bp | CATCACTGCCCTTCATTGTCGATTTCAGCAAATTGTTaGCAGCTTTGTAATCTTCATTCAGCTGATTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HHCPSLSISANC*QLCNLHSADSS Trigger: TGAAGAATCAGCTGAATGAAGATTACAAAGCTGTCAACAATTTGCTGAAATCGACAATGAAGGGCAGTGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105838.8 ENSMUST00000105840.8 |
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| CDS CAA 72 bp | AATTACTTTATCCACAACAAAGAGCTTTTGAATCATTaGCCATTCGCTGGGCCATATGAGAGAGTTTCGAGT | + |
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Preference number: 6 (lower is better) Translates to: NYFIHNKELLNH*PFAGPYERVSS Trigger: ACTCGAAACTCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTGGATAAAGTAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141628.8 |
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| CDS CAA 90 bp | TGTGATTTTAATTACTTTATCCACAACAAAGAGCTTTTGAATCATTaGCCATTCGCTGGGCCATATGAGAGAGTTTCGAGTCTTCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: CDFNYFIHNKELLNH*PFAGPYERVSSLLW Trigger: CCAAAGAAGACTCGAAACTCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTGGATAAAGTAATTAAAATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141628.8 |
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| CDS TCA 72 bp | ATCCATCACCCTTCATTGTCGATTTCAGCAAATTGTTaGCAGCTTTGTAATCTTCATTCAGCTGATTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: IHHPSLSISANC*QLCNLHSADSS Trigger: TGAAGAATCAGCTGAATGAAGATTACAAAGCTGTCAACAATTTGCTGAAATCGACAATGAAGGGTGATGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105837.2 ENSMUST00000105839.8 |
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| CDS GCA 72 bp | AATTCTTTTTCCTCCTCTCACAGTTGGGATCATCAATaGTATGAAAACTATTCTCATCTATCTCTCCTAACC | + |
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Preference number: 6 (lower is better) Translates to: NSFSSSHSWDHQ*YENYSHLSLLT Trigger: GGTTAGGAGAGATAGATGAGAATAGTTTTCATAGCATTGATGATCCCAACTGTGAGAGGAGGAAAAAGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 ENSMUST00000153100.8 |
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| CDS CAA 90 bp | TGTGATTTTAATTACTTTATCCACAACAAAGAGCTTTTGAATCATTaGCCATTCGCTGGGCCATATGAGAGCTATAAGTTTCGAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CDFNYFIHNKELLNH*PFAGPYESYKFRVF Trigger: GAAGACTCGAAACTTATAGCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTGGATAAAGTAATTAAAATCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105840.8 |
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| CDS CAA 90 bp | TGTGATTTTAATTACTTTATCCACAACAAAGAGCTTTTGAATCATTaGCCATTCGCTGGGCCATATGAGAGCTATATTATTATGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CDFNYFIHNKELLNH*PFAGPYESYIIMCC Trigger: GCAGCACATAATAATATAGCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTGGATAAAGTAATTAAAATCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055131.13 |
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| CDS CAA 90 bp | TTCAATTCTTGTGATTTTAATTACTTTATCCACAACAAAGAGCTTTaGAATCATTTGCCATTCGCTGGGCCATATGAGAGAGTTTCGAGT | + |
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Preference number: 6 (lower is better) Translates to: FNSCDFNYFIHNKEL*NHLPFAGPYERVSS Trigger: ACTCGAAACTCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTGGATAAAGTAATTAAAATCACAAGAATTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141628.8 |
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| CDS TCA 72 bp | TCCGATATTCTCTTCATAATTGATATTTTATCAGGATaGAGCTTGTCGTGGGAACACAGGCAAGCATTATTA | + |
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Preference number: 6 (lower is better) Translates to: SDILFIIDILSG*SLSWEHRQALL Trigger: TAATAATGCTTGCCTGTGTTCCCACGACAAGCTTCATCCTGATAAAATATCAATTATGAAGAGAATATCGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055131.13 ENSMUST00000105839.8 ENSMUST00000105840.8 |
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| CDS CAA 72 bp | AATTACTTTATCCACAACAAAGAGCTTTTGAATCATTaGCCATTCGCTGGGCCATATGAGAGCTATAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: NYFIHNKELLNH*PFAGPYESYKF Trigger: AAACTTATAGCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTGGATAAAGTAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105840.8 |
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| CDS CAA 72 bp | AATTACTTTATCCACAACAAAGAGCTTTTGAATCATTaGCCATTCGCTGGGCCATATGAGAGCTATATTATT | + |
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Preference number: 6 (lower is better) Translates to: NYFIHNKELLNH*PFAGPYESYII Trigger: AATAATATAGCTCTCATATGGCCCAGCGAATGGCAAATGATTCAAAAGCTCTTTGTTGTGGATAAAGTAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055131.13 |
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