Pregenerated sensors for USP46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054814Ensembl transcript IDs: ENSMUST00000068058.14, ENSMUST00000119154.8, ENSMUST00000145016.3, ENSMUST00000152408.3
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCGGACCAGTGCCCATCATAGTGATGACATCAGCGGGCCATTGTaGGGGAGGAGAGGTCTGCAGAGAAACCACGGCTCTAGTGCTTGG | + |
|
Preference number: 1 (lower is better) Translates to: CRTSAHHSDDISGPL*GRRGLQRNHGSSAW Trigger: CCAAGCACTAGAGCCGTGGTTTCTCTGCAGACCTCTCCTCCCCCACAATGGCCCGCTGATGTCATCACTATGATGGGCACTGGTCCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 90 bp | CCCCATTGGGGACTGTTGCTGGGTCTTTGTGCTATCTCTGTGACCTaGGATTGGTCTCACGTGCCTCACAGCCACTGTCATCGCCTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: PHWGLLLGLCAISVT*DWSHVPHSHCHRLL Trigger: AAGCAGGCGATGACAGTGGCTGTGAGGCACGTGAGACCAATCCCAGGTCACAGAGATAGCACAAAGACCCAGCAACAGTCCCCAATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 90 bp | GGGGCGTTTCTGACGGCCCTCACCCTTGTTACTCTGAGACATCCCTaGAGTCTTGGCTCTGAACCCACAACACACTCATTTAGCACCGTG | + |
|
Preference number: 1 (lower is better) Translates to: GAFLTALTLVTLRHP*SLGSEPTTHSFSTV Trigger: CACGGTGCTAAATGAGTGTGTTGTGGGTTCAGAGCCAAGACTTCAGGGATGTCTCAGAGTAACAAGGGTGAGGGCCGTCAGAAACGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR CCA 90 bp | TGGGGACTGTTGCTGGGTCTTTGTGCTATCTCTGTGACCTGGGATTaGTCTCACGTGCCTCACAGCCACTGTCATCGCCTGCTTAATGCT | + |
|
Preference number: 1 (lower is better) Translates to: WGLLLGLCAISVTWD*SHVPHSHCHRLLNA Trigger: AGCATTAAGCAGGCGATGACAGTGGCTGTGAGGCACGTGAGACCAATCCCAGGTCACAGAGATAGCACAAAGACCCAGCAACAGTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 90 bp | AGGCTTACTCACTCCTGCTGGGGGAAAGGACATACAAACCCCCATTaGGGACTGTTGCTGGGTCTTTGTGCTATCTCTGTGACCTGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: RLTHSCWGKGHTNPH*GLLLGLCAISVTWD Trigger: ATCCCAGGTCACAGAGATAGCACAAAGACCCAGCAACAGTCCCCAATGGGGGTTTGTATGTCCTTTCCCCCAGCAGGAGTGAGTAAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 90 bp | GGCAGAAAAATAGGCAATAATTGTCTCTGGCCCATGCCATTTGCATaGGCCAACCACGATGGTGCCAGCAAATGCCTTGACCAGGTACAG | + |
|
Preference number: 1 (lower is better) Translates to: GRKIGNNCLWPMPFA*ANHDGASKCLDQVQ Trigger: CTGTACCTGGTCAAGGCATTTGCTGGCACCATCGTGGTTGGCTCATGCAAATGGCATGGGCCAGAGACAATTATTGCCTATTTTTCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 90 bp | CTGTTACGTCCAAAATATAAACGGGACAGGAAACCGTGTGGGAAATaGCTTCCTATTCAGACTGACACCCTGATGGCATTCTTCCAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: LLRPKYKRDRKPCGK*LPIQTDTLMAFFQA Trigger: AGCCTGGAAGAATGCCATCAGGGTGTCAGTCTGAATAGGAAGCCATTTCCCACACGGTTTCCTGTCCCGTTTATATTTTGGACGTAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 90 bp | ACCGTCTCAGCCCTGGTGCCACTGACTAAAAACCATCAGCAGGGTTaGAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGA | + |
|
Preference number: 1 (lower is better) Translates to: TVSALVPLTKNHQQG*KDSLKSLAVPNMRR Trigger: TCTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGATGGTTTTTAGTCAGTGGCACCAGGGCTGAGACGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 90 bp | ATAAGGTTCTTCCTGGAAACTGTCTTGTCAAGCATTCTAGGAATCTaGGCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: IRFFLETVLSSILGI*ATILPLHPPPNTSC Trigger: ACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGCTCAGATTCCTAGAATGCTTGACAAGACAGTTTCCAGGAAGAACCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 90 bp | AAGTCACTACCAGATAGTTCCATACTGGATAAACTGATGGAGTGTTaGTGGAGAGCCGTGTTTGGTCTTCTCCGGTCTTCTTCTCCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: KSLPDSSILDKLMEC*WRAVFGLLRSSSPA Trigger: TGCTGGAGAAGAAGACCGGAGAAGACCAAACACGGCTCTCCATCAACACTCCATCAGTTTATCCAGTATGGAACTATCTGGTAGTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR GCA 90 bp | TGCTATCCTCTTCACTGCTGCACGATGGCCACTGATGATTTCAACTaGAGTTTGAGTTCACATTACACCACGAGTTTGCATGTTCATTCG | + |
|
Preference number: 1 (lower is better) Translates to: CYPLHCCTMATDDFN*SLSSHYTTSLHVHS Trigger: CGAATGAACATGCAAACTCGTGGTGTAATGTGAACTCAAACTGCAGTTGAAATCATCAGTGGCCATCGTGCAGCAGTGAAGAGGATAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 90 bp | CTTCCAGGCTCTCTTCAAGCCAGTCTACCTGATGAGACCTTGGAATaGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: LPGSLQASLPDETLE*EKLHQCNKTMHTSF Trigger: AAAGCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTCATCAGGTAGACTGGCTTGAAGAGAGCCTGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 90 bp | GTGAAGAATGAGACATGTCCCTTGAAGCGTGAACAAATGAAGCGTTaGCATGCTGAAGTTCCGAGTCACAAACAATTCAAGATATTTCAG | + |
|
Preference number: 1 (lower is better) Translates to: VKNETCPLKREQMKR*HAEVPSHKQFKIFQ Trigger: CTGAAATATCTTGAATTGTTTGTGACTCGGAACTTCAGCATGCCAACGCTTCATTTGTTCACGCTTCAAGGGACATGTCTCATTCTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 90 bp | AACCAAGGCAAGGTCCATTTTTGTCACTTGCATAAGAGAGTAACATaGCATAACCCTGTTTTGTCTGCTCCAGTGAAGAATGAGACATGT | + |
|
Preference number: 1 (lower is better) Translates to: NQGKVHFCHLHKRVT*HNPVLSAPVKNETC Trigger: ACATGTCTCATTCTTCACTGGAGCAGACAAAACAGGGTTATGTCATGTTACTCTCTTATGCAAGTGACAAAAATGGACCTTGCCTTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 90 bp | ACATACAGACTTTCTGTGGGTTTAGCAGTTGGGATAAATGACAGATaGCATCCATTACATACTTTGCTGTATGTCAAGTACATCTCAAAT | + |
|
Preference number: 1 (lower is better) Translates to: TYRLSVGLAVGINDR*HPLHTLLYVKYISN Trigger: ATTTGAGATGTACTTGACATACAGCAAAGTATGTAATGGATGCCATCTGTCATTTATCCCAACTGCTAAACCCACAGAAAGTCTGTATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR CAA 90 bp | CACTGCCGGACCAGTGCCCATCATAGTGATGACATCAGCGGGCCATaGTGGGGGAGGAGAGGTCTGCAGAGAAACCACGGCTCTAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HCRTSAHHSDDISGP*WGRRGLQRNHGSSA Trigger: AGCACTAGAGCCGTGGTTTCTCTGCAGACCTCTCCTCCCCCACAATGGCCCGCTGATGTCATCACTATGATGGGCACTGGTCCGGCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACGGGGGAGGAGAGGTCTaGAGAGAAACCACGGCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ATILPLHPPPNTSCDPPHGGGEV*RETTAL Trigger: TAGAGCCGTGGTTTCTCTGCAGACCTCTCCTCCCCC...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAACGGAGCCTTTAAGTCGTGCATTTTGGTGGATGAGAAAGCTTGCTTCCACCGCCAACATTGCTGCCTaGAACACGGGGGCTCGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: ETEPLSRAFWWMRKLASTANIAA*NTGARL Trigger: GAGCCGAGCCCCCGTGTTTCAGGCAGCAATGTTGGC...GGTGGAAGCAAGCTTTCTCATCCACCAAAATGCACGACTTAAAGGCTCCGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCAACCACACAGTGGCCAAAATCAATCCAAATCAAACGCACGACGAAGCTGGGCCTGTCTCTGCCTACTaGGTGCTGGGATTAAAGGCG | + |
|
Preference number: 2 (lower is better) Translates to: SNHTVAKINPNQTHDEAGPVSAY*VLGLKA Trigger: CGCCTTTAATCCCAGCACTCAGTAGGCAGAGACAGG...CCCAGCTTCGTCGTGCGTTTGATTTGGATTGATTTTGGCCACTGTGTGGTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR CCA 90 bp | CGTGCGCCACCATACCTGGCTAGGATGCTTGATTTAAAAATCTGCTCTTACAGTACAGCCAAACAGCAGTaGGGTGGACCATGGCGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RAPPYLARMLDLKICSYSTAKQQ*GGPWRG Trigger: CCCTCGCCATGGTCCACCCCACTGCTGTTTGGCTGT...ACTGTAAGAGCAGATTTTTAAATCAAGCATCCTAGCCAGGTATGGTGGCGCACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR CAA 90 bp | TTCCTGGGGATCCACGAGCCTCTTGTGTCCTCCAAAGGCCTCTGCTaGAATGTGGTACACATAAACTCACACAGGCACACACACATACAC | + |
|
Preference number: 2 (lower is better) Translates to: FLGIHEPLVSSKGLC*NVVHINSHRHTHIH Trigger: GTGTATGTGTGTGTGCCTGTGTGAGTTTATGTGTACCACATTCAAGCAGAGGCCTTTGGAGGACACAAGAGGCTCGTGGATCCCCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR GCA 90 bp | TGCATGGGAAGGGGGCCCCCAGAAACCATTCAGGAAGCCTACCAAACACTCAGTCTTGGAGTATTTCCCTaGTTGAATGAGTCTCGCACT | + |
|
Preference number: 2 (lower is better) Translates to: CMGRGPPETIQEAYQTLSLGVFP*LNESRT Trigger: AGTGCGAGACTCATTCAAGCAGGGAAATACTCCAAG...ACTGAGTGTTTGGTAGGCTTCCTGAATGGTTTCTGGGGGCCCCCTTCCCATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCGGGGGAGGAGAGGTCTaGAGAGAAACCACGGCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSGGGEV*RETTAL Trigger: TAGAGCCGTGGTTTCTCTGCAGACCTCTCCTCCCCC...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTAGCCACTGAGGGATCACAACTTGCAAAGGGCTGCTCTGACCTCCCAAAAGTGGATGAGAAAGCTTaGTTCCACCAGAAGCACACC | + |
|
Preference number: 2 (lower is better) Translates to: FLATEGSQLAKGCSDLPKVDEKA*FHQKHT Trigger: GGTGTGCTTCTGGTGGAAGCAAGCTTTCTCATCCAC...TTTTGGGAGGTCAGAGCAGCCCTTTGCAAGTTGTGATCCCTCAGTGGCTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGGACCTGTCAAAGGAATaGATGGGAAGGGGGCCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKDLSKE*MGRGPP Trigger: TGGGGGCCCCCTTCCCATGCATTCCTTTGACAGGTC...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CAA 90 bp | CCTCTTCACTGCTGCACGATGGCCACTGATGATTTCAACTGCAGTTaGAGTTCACATTACACCACGAGTTTGCATGTTCATTCGCTGACG | + |
|
Preference number: 2 (lower is better) Translates to: PLHCCTMATDDFNCS*SSHYTTSLHVHSLT Trigger: CGTCAGCGAATGAACATGCAAACTCGTGGTGTAATGTGAACTCAAACTGCAGTTGAAATCATCAGTGGCCATCGTGCAGCAGTGAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCGCCACTGTCATCGCCTaGTTAATGCTAGGAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSATVIA*LMLGTR Trigger: CCTGGTTCCTAGCATTAAGCAGGCGATGACAGTGGC...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTATCAGCGGGCCATTGTaGGGGAGGAGAGGTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HLHKLKAMVAALTDEYLSISGPL*GRRGLQ Trigger: CTGCAGACCTCTCCTCCCCCACAATGGCCCGCTGAT...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CAA 90 bp | CATAACCCTGTTTTGTCTGCTCCAGTGAAGAATGAGACATGTCCCTaGAAGCGTGAACAAATGAAGCGTTGGCATGCTGAAGTTCCGAGT | + |
|
Preference number: 2 (lower is better) Translates to: HNPVLSAPVKNETCP*KREQMKRWHAEVPS Trigger: ACTCGGAACTTCAGCATGCCAACGCTTCATTTGTTCACGCTTCAAGGGACATGTCTCATTCTTCACTGGAGCAGACAAAACAGGGTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CAA 90 bp | GGCATTCTTCCAGGCTCTCTTCAAGCCAGTCTACCTGATGAGACCTaGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACC | + |
|
Preference number: 2 (lower is better) Translates to: GILPGSLQASLPDET*EWEKLHQCNKTMHT Trigger: GGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTCATCAGGTAGACTGGCTTGAAGAGAGCCTGGAAGAATGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCAGCCTTACCTCACCTTaGTCCAATGTGGAGGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSSLTSP*SNVEED Trigger: ATCCTCCTCCACATTGGAGCAAGGTGAGGTAAGGCT...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCAAAAAGGATGGGGCATaGGACAGAGCTGCCTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSKKDGA*DRAALC Trigger: ACACAAGGCAGCTCTGTCCCATGCCCCATCCTTTTT...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATACTTTGCTGTATGTCAAGTACATCTCAAATTAAACAGCCGCCACCAAATCTGGACTCCCAAGAAGTaGAGGCAGTGGTCTCCGCAT | + |
|
Preference number: 2 (lower is better) Translates to: TYFAVCQVHLKLNSRHQIWTPKK*RQWSPH Trigger: ATGCGGAGACCACTGCCTTCACTTCTTGGGAGTCCA...GATTTGGTGGCGGCTGTTTAATTTGAGATGTACTTGACATACAGCAAAGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGCCTTTTGGCTTTGCCTaGCCTGAGCTCCAAAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKPFGFA*PELQNV Trigger: GACATTTTGGAGCTCAGGGCAGGCAAAGCCAAAAGG...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAACGGAGCCTTTAAGTCGTGCATTTTGGTGGATGAGAAAGCTTGCTTCCACCCACTTTATATTTTTCTaGCACCATTCCCTCGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: ETEPLSRAFWWMRKLASTHFIFF*HHSLAG Trigger: ACCTGCGAGGGAATGGTGGCAGAAAAATATAAAGTG...GGTGGAAGCAAGCTTTCTCATCCACCAAAATGCACGACTTAAAGGCTCCGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCCTTACTCACTCCTGCTaGGGGAAAGGACATACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSLTHSC*GKGHTN Trigger: GTTTGTATGTCCTTTCCCCCAGCAGGAGTGAGTAAG...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR TCA 90 bp | CACTGCTCTTGTTTAGGACCTGGATTTGGGTCCCAACACCTACATAAGGCAGCTTCAAAGAGTCAGCCATaGTTGAAATCTTTGTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: HCSCLGPGFGSQHLHKAASKSQP*LKSLCE Trigger: TTCACACAAAGATTTCAATCATGGCTGACTCTTTGA...AGCTGCCTTATGTAGGTGTTGGGACCCAAATCCAGGTCCTAAACAAGAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGCACCTTGCTCCAATGTaGAGGAGGATTTTGGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKHLAPM*RRILAS Trigger: AGATGCCAAAATCCTCCTCCACATTGGAGCAAGGTG...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTAGCCACTGAGGGATCACAACTTGCAAAGGGCTGCTCTGACCTCCCAAAAGGGATAAATGACAGATaGCATCCATTACATACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: FLATEGSQLAKGCSDLPKGINDR*HPLHTL Trigger: CAAAGTATGTAATGGATGCCATCTGTCATTTATCCC...TTTTGGGAGGTCAGAGCAGCCCTTTGCAAGTTGTGATCCCTCAGTGGCTAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR CCA 90 bp | CGTGCGCCACCATACCTGGCTAGGATGCTTGATTTAAAAATCTGCTCTTACAGTTTAATGTCTTGGGATTaGGATAGGATGCCCAACACT | + |
|
Preference number: 2 (lower is better) Translates to: RAPPYLARMLDLKICSYSLMSWD*DRMPNT Trigger: AGTGTTGGGCATCCTATCCCAATCCCAAGACATTAA...ACTGTAAGAGCAGATTTTTAAATCAAGCATCCTAGCCAGGTATGGTGGCGCACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCGACAACTACAGGACCTaGTGGAAGAAAATCATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSDNYRT*WKKIIP Trigger: AGGAATGATTTTCTTCCATCAGGTCCTGTAGTTGTC...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCAACCATCAGCAGGGTTaGAAAGACAGTTTGAAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSNHQQG*KDSLKS Trigger: GCTTTTCAAACTGTCTTTTCAACCCTGCTGATGGTT...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAACGGAGCCTTTAAGTCGTGCATTTTGGTGGATGAGAAAGCTTGCTTCCACCTGTCCTGCAGTTTTCTaGTCTTATAAAAACAACGGT | + |
|
Preference number: 2 (lower is better) Translates to: ETEPLSRAFWWMRKLASTCPAVF*SYKNNG Trigger: ACCGTTGTTTTTATAAGAGCAGAAAACTGCAGGACA...GGTGGAAGCAAGCTTTCTCATCCACCAAAATGCACGACTTAAAGGCTCCGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCACTCAGTATGGACCGTaGCATTTACAGGAAATATCA | + |
|
Preference number: 2 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSTQYGP*HLQEIS Trigger: TGATATTTCCTGTAAATGTCACGGTCCATACTGAGT...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CAA 90 bp | ATGGCTGTATGTATACAAATATCTCAGGCCATCAATCCCTTACACTaGGAAAAGTGCCTCTCCTTAAAGAATGAAGGTTCACCATCCATG | + |
|
Preference number: 2 (lower is better) Translates to: MAVCIQISQAINPLH*EKCLSLKNEGSPSM Trigger: CATGGATGGTGAACCTTCATTCTTTAAGGAGAGGCACTTTTCCAAGTGTAAGGGATTGATGGCCTGAGATATTTGTATACATACAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTCTTGGAGTATTTCCCTaGTTGAATGAGTCTCGCACT | + |
|
Preference number: 2 (lower is better) Translates to: HLHKLKAMVAALTDEYLSLGVFP*LNESRT Trigger: AGTGCGAGACTCATTCAAGCAGGGAAATACTCCAAG...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR TCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTACTCAGTATGGACCGTaGCATTTACAGGAAATATCA | + |
|
Preference number: 2 (lower is better) Translates to: HLHKLKAMVAALTDEYLSTQYGP*HLQEIS Trigger: TGATATTTCCTGTAAATGTCACGGTCCATACTGAGT...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACGACATCAGCGGGCCATaGTGGGGGAGGAGAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ATILPLHPPPNTSCDPPHDISGP*WGRRGL Trigger: CAGACCTCTCCTCCCCCACAATGGCCCGCTGATGTC...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR GCA 72 bp | AGAAGCCCTGGTTTAAATCACCCTGAGGGATGGCCGTaGAAACAGCCAAACAGCAGTGGGGTGGACCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSPGLNHPEGWP*KQPNSSGVDHG Trigger: GCCATGGTCCACCCCACTGCTGTTTGGCTGTTTGCACGGCCATCCCTCAGGGTGATTTAAACCAGGGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR GCA 72 bp | AGGCTGCCCTTGAACTCACAGAGATCCACCTGTCTCTaGCTACTGAGTGCTGGGATTAAAGGCGTGCGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RLPLNSQRSTCL*LLSAGIKGVRH Trigger: GTGGCGCACGCCTTTAATCCCAGCACTCAGTAGGCAGAGACAGGTGGATCTCTGTGAGTTCAAGGGCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR CCA 72 bp | AGTGCCCATCATAGTGATGACATCAGCGGGCCATTGTaGGGGAGGAGAGGTCTGCAGAGAAACCACGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SAHHSDDISGPL*GRRGLQRNHGS Trigger: AGAGCCGTGGTTTCTCTGCAGACCTCTCCTCCCCCACAATGGCCCGCTGATGTCATCACTATGATGGGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | AACACCTACATAAGGCAGCTCCTAGACCCCAGTTCCTaGGGATCCACGAGCCTCTTGTGTCCTCCAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NTYIRQLLDPSS*GSTSLLCPPKA Trigger: GGCCTTTGGAGGACACAAGAGGCTCGTGGATCCCCAGGAACTGGGGTCTAGGAGCTGCCTTATGTAGGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTAGCCACTGAGGGATCACAACTTGCAAAGGGCTGCTCTGACCTCCCAAAACCGTGTGCGCCAACATaGCTGCCTGAAACACGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FLATEGSQLAKGCSDLPKPCAPT*LPETRG Trigger: CCCCCGTGTTTCAGGCAGCAATGTTGGCGCACACGG...TTTTGGGAGGTCAGAGCAGCCCTTTGCAAGTTGTGATCCCTCAGTGGCTAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR GCA 72 bp | ACGGGTAGCAATGCTTCCAGGGACCTGTCAAAGGAATaGATGGGAAGGGGGCCCCCAGAAACCATTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TGSNASRDLSKE*MGRGPPETIQE Trigger: TTCCTGAATGGTTTCTGGGGGCCCCCTTCCCATGCATTCCTTTGACAGGTCCCTGGAAGCATTGCTACCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | TTGCTGGGTCTTTGTGCTATCTCTGTGACCTGGGATTaGTCTCACGTGCCTCACAGCCACTGTCATCGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLGLCAISVTWD*SHVPHSHCHRL Trigger: CAGGCGATGACAGTGGCTGTGAGGCACGTGAGACCAATCCCAGGTCACAGAGATAGCACAAAGACCCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 72 bp | ATTGGGGACTGTTGCTGGGTCTTTGTGCTATCTCTGTaGCCTGGGATTGGTCTCACGTGCCTCACAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: IGDCCWVFVLSL*PGIGLTCLTAT Trigger: AGTGGCTGTGAGGCACGTGAGACCAATCCCAGGTCACAGAGATAGCACAAAGACCCAGCAACAGTCCCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR GCA 72 bp | TACAAACCCCCATTGGGGACTGTTGCTGGGTCTTTGTaGTATCTCTGTGACCTGGGATTGGTCTCACGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: YKPPLGTVAGSL*YLCDLGLVSRA Trigger: GGCACGTGAGACCAATCCCAGGTCACAGAGATAGCACAAAGACCCAGCAACAGTCCCCAATGGGGGTTTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | GGACTGTTGCTGGGTCTTTGTGCTATCTCTGTGACCTaGGATTGGTCTCACGTGCCTCACAGCCACTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GLLLGLCAISVT*DWSHVPHSHCH Trigger: ATGACAGTGGCTGTGAGGCACGTGAGACCAATCCCAGGTCACAGAGATAGCACAAAGACCCAGCAACAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | CACTCCTGCTGGGGGAAAGGACATACAAACCCCCATTaGGGACTGTTGCTGGGTCTTTGTGCTATCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HSCWGKGHTNPH*GLLLGLCAISV Trigger: CACAGAGATAGCACAAAGACCCAGCAACAGTCCCCAATGGGGGTTTGTATGTCCTTTCCCCCAGCAGGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | AAGCTAAGAAGCCCTGGTTTAAATCACCCTGAGGGATaGCCGTGCAAACAGCCAAACAGCAGTGGGGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KLRSPGLNHPEG*PCKQPNSSGVD Trigger: GTCCACCCCACTGCTGTTTGGCTGTTTGCACGGCCATCCCTCAGGGTGATTTAAACCAGGGCTTCTTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACAAAAACATCTTCCTTTaGGCTTTGCCTGCCCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ATILPLHPPPNTSCDPPHKNIFL*ALPALS Trigger: GCTCAGGGCAGGCAAAGCCAAAAGGAAGATGTTTTT...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR GCA 72 bp | GGGATCCACGAGCCTCTTGTGTCCTCCAAAGGCCTCTaGTTGAATGTGGTACACATAAACTCACACAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GIHEPLVSSKGL*LNVVHINSHRH Trigger: GTGCCTGTGTGAGTTTATGTGTACCACATTCAAGCAGAGGCCTTTGGAGGACACAAGAGGCTCGTGGATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR CCA 72 bp | GGCCAAAATCAATCCAAATCAAACGCACGACGAAGCTaGGGCGTTTCTGACGGCCCTCACCCTTGTTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: GQNQSKSNARRS*GVSDGPHPCYS Trigger: AGAGTAACAAGGGTGAGGGCCGTCAGAAACGCCCCAGCTTCGTCGTGCGTTTGATTTGGATTGATTTTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR TCA 72 bp | CTGACGGCCCTCACCCTTGTTACTCTGAGACATCCCTaGAGTCTTGGCTCTGAACCCACAACACACTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LTALTLVTLRHP*SLGSEPTTHSF Trigger: AAATGAGTGTGTTGTGGGTTCAGAGCCAAGACTTCAGGGATGTCTCAGAGTAACAAGGGTGAGGGCCGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACAAACCATCAGCAGGGTaGAAAAGACAGTTTGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ATILPLHPPPNTSCDPPHKPSAG*KRQFEK Trigger: CTTTTCAAACTGTCTTTTCAACCCTGCTGATGGTTT...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 72 bp | CAGGAAACCGTGTGGGAAATGGCTTCCTATTCAGACTaGCACCCTGATGGCATTCTTCCAGGCTCTCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QETVWEMASYSD*HPDGILPGSLQ Trigger: TTGAAGAGAGCCTGGAAGAATGCCATCAGGGTGTCAGTCTGAATAGGAAGCCATTTCCCACACGGTTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 72 bp | ATAGGCAATAATTGTCTCTGGCCCATGCCATTTGCATaGGCCAACCACGATGGTGCCAGCAAATGCCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: IGNNCLWPMPFA*ANHDGASKCLD Trigger: GTCAAGGCATTTGCTGGCACCATCGTGGTTGGCTCATGCAAATGGCATGGGCCAGAGACAATTATTGCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR GCA 72 bp | ATTGGTCTCACGTGCCTCACAGCCACTGTCATCGCCTaGTTAATGCTAGGAACCAGGGACAGTAAGTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IGLTCLTATVIA*LMLGTRDSKLE Trigger: TTCTAACTTACTGTCCCTGGTTCCTAGCATTAAGCAGGCGATGACAGTGGCTGTGAGGCACGTGAGACCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 72 bp | TTCCTGGAAACTGTCTTGTCAAGCATTCTAGGAATCTaGGCCACCATCTTACCTCTCCACCCACCTCCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FLETVLSSILGI*ATILPLHPPPN Trigger: GTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGCTCAGATTCCTAGAATGCTTGACAAGACAGTTTCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | CTACCAATGACAGCCTTACCTCACCTTGCTCCAATGTaGAGGAGGATTTTGGCATCTAGGCCACTCACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPMTALPHLAPM*RRILASRPLTF Trigger: AAAAGTGAGTGGCCTAGATGCCAAAATCCTCCTCCACATTGGAGCAAGGTGAGGTAAGGCTGTCATTGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | GTATGCGGAGAAACGGAGCCTTTAAGTCGTGCATTTTaGTGGATGAGAAAGCTTGCTTCCACCAGAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VCGETEPLSRAF*WMRKLASTRST Trigger: TGTGCTTCTGGTGGAAGCAAGCTTTCTCATCCACCAAAATGCACGACTTAAAGGCTCCGTTTCTCCGCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCTCTCAAACTGTGGATTGTGACCCCACATGGCTTGACATAACAAAATGGGCATACACACTGCTCTaGTTTAGGACCTGGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLSQTVDCDPTWLDITKWAYTLL*FRTWIW Trigger: CCAAATCCAGGTCCTAAACAAGAGCAGTGTGTATGC...CCATTTTGTTATGTCAAGCCATGTGGGGTCACAATCCACAGTTTGAGAGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTAGCCACTGAGGGATCACAACTTGCAAAGGGCTGCTCTGACCTCCCAAAATTTAAGTCGTGCATTTaGGTGGATGAGAAAGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FLATEGSQLAKGCSDLPKFKSCI*VDEKAC Trigger: GCAAGCTTTCTCATCCACCAAAATGCACGACTTAAA...TTTTGGGAGGTCAGAGCAGCCCTTTGCAAGTTGTGATCCCTCAGTGGCTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR TCA 72 bp | GCCCTGGTGCCACTGACTAAAAACCATCAGCAGGGTTaGAAAGACAGTTTGAAAAGCTTAGCGGTACCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALVPLTKNHQQG*KDSLKSLAVPN Trigger: GTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGATGGTTTTTAGTCAGTGGCACCAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 72 bp | CCAGATAGTTCCATACTGGATAAACTGATGGAGTGTTaGTGGAGAGCCGTGTTTGGTCTTCTCCGGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PDSSILDKLMEC*WRAVFGLLRSS Trigger: AGAAGACCGGAGAAGACCAAACACGGCTCTCCATCAACACTCCATCAGTTTATCCAGTATGGAACTATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | CCAAAATATAAACGGGACAGGAAACCGTGTGGGAAATaGCTTCCTATTCAGACTGACACCCTGATGGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: PKYKRDRKPCGK*LPIQTDTLMAF Trigger: GAATGCCATCAGGGTGTCAGTCTGAATAGGAAGCCATTTCCCACACGGTTTCCTGTCCCGTTTATATTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTGCGCCACCATACCTGGCTAGGATGCTTGATTTAAAAATCTGCTCTTACAGTTCCAAAGGCCTCTGCTaGAATGTGGTACACATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RAPPYLARMLDLKICSYSSKGLC*NVVHIN Trigger: GTTTATGTGTACCACATTCAAGCAGAGGCCTTTGGA...ACTGTAAGAGCAGATTTTTAAATCAAGCATCCTAGCCAGGTATGGTGGCGCACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR GCA 72 bp | CTTCACTGCTGCACGATGGCCACTGATGATTTCAACTaGAGTTTGAGTTCACATTACACCACGAGTTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LHCCTMATDDFN*SLSSHYTTSLH Trigger: ATGCAAACTCGTGGTGTAATGTGAACTCAAACTGCAGTTGAAATCATCAGTGGCCATCGTGCAGCAGTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | GAGACATGTCCCTTGAAGCGTGAACAAATGAAGCGTTaGCATGCTGAAGTTCCGAGTCACAAACAATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ETCPLKREQMKR*HAEVPSHKQFK Trigger: CTTGAATTGTTTGTGACTCGGAACTTCAGCATGCCAACGCTTCATTTGTTCACGCTTCAAGGGACATGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGAAAAACATCTTCCTTTaGGCTTTGCCTGCCCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKKNIFL*ALPALS Trigger: GCTCAGGGCAGGCAAAGCCAAAAGGAAGATGTTTTT...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTCTGAAAAACACCAAAGGTATTCTGCCTCCCACAGCATCAAAGAGTCAGAAGTTGCAAAAGTCTTaGAGAGTCAGGGTTAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SPLKNTKGILPPTASKSQKLQKS*RVRVST Trigger: TGTGCTAACCCTGACTCTCAAAGACTTTTGCAACTT...CTGACTCTTTGATGCTGTGGGAGGCAGAATACCTTTGGTGTTTTTCAGAGGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR GCA 72 bp | ATATCTCAGGCCATCAATCCCTTACACTTGGAAAAGTaGCTCTCCTTAAAGAATGAAGGTTCACCATCCATG | + |
|
Preference number: 3 (lower is better) Translates to: ISQAINPLHLEK*LSLKNEGSPSM Trigger: CATGGATGGTGAACCTTCATTCTTTAAGGAGAGGCACTTTTCCAAGTGTAAGGGATTGATGGCCTGAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR GCA 72 bp | GCTCGGCTCAGGTCTGAGAGGACTGTATTTTATAACTaGAATGCTTGTCCTGCAGTTTTCTGCTCTTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: ARLRSERTVFYN*NACPAVFCSYK Trigger: TTTATAAGAGCAGAAAACTGCAGGACAAGCATTGCAGTTATAAAATACAGTCCTCTCAGACCTGAGCCGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR CCA 72 bp | TCTCTTCAAGCCAGTCTACCTGATGAGACCTTGGAATaGGAAAAACTGCATCAATGTAACAAGACTATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLQASLPDETLE*EKLHQCNKTMH Trigger: GTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTCATCAGGTAGACTGGCTTGAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTCTGAAAAACACCAAAGGTATTCTGCCTCCCACAGCATCAAAGAGTCAGCATCCATTACATACTTaGCTGTATGTCAAGTACATC | + |
|
Preference number: 3 (lower is better) Translates to: SPLKNTKGILPPTASKSQHPLHT*LYVKYI Trigger: GATGTACTTGACATACAGCAAAGTATGTAATGGATG...CTGACTCTTTGATGCTGTGGGAGGCAGAATACCTTTGGTGTTTTTCAGAGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR TCA 72 bp | CACATTCACAGTATATTAACGTGTGTAGAAGTCAACTaGCATCCCAAAAGGAAGCCAAGGACTATGACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HIHSILTCVEVN*HPKRKPRTMTH Trigger: ATGGGTCATAGTCCTTGGCTTCCTTTTGGGATGTCAGTTGACTTCTACACACGTTAATATACTGTGAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | CAGAAACCATTCAGGAAGCCTACCAAACACTCAGTATaGACCGTGACATTTACAGGAAATATCACTCTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: QKPFRKPTKHSV*TVTFTGNITLV Trigger: AACTAGAGTGATATTTCCTGTAAATGTCACGGTCCATACTGAGTGTTTGGTAGGCTTCCTGAATGGTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CCA 72 bp | AGAAAATTTGGTAATGAAAGGGTTCCAACCACACAGTaGCCAAAATCAATCCAAATCAAACGCACGACGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RKFGNERVPTTQ*PKSIQIKRTTK Trigger: CTTCGTCGTGCGTTTGATTTGGATTGATTTTGGCCACTGTGTGGTTGGAACCCTTTCATTACCAAATTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR CCA 72 bp | CTTTCTGTGGGTTTAGCAGTTGGGATAAATGACAGATaGCATCCATTACATACTTTGCTGTATGTCAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LSVGLAVGINDR*HPLHTLLYVKY Trigger: GTACTTGACATACAGCAAAGTATGTAATGGATGCCATCTGTCATTTATCCCAACTGCTAAACCCACAGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR TCA 72 bp | AAGGTCCATTTTTGTCACTTGCATAAGAGAGTAACATaGCATAACCCTGTTTTGTCTGCTCCAGTGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KVHFCHLHKRVT*HNPVLSAPVKN Trigger: ATTCTTCACTGGAGCAGACAAAACAGGGTTATGTCATGTTACTCTCTTATGCAAGTGACAAAAATGGACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR TCA 72 bp | ATACAGACTTTCTGTGGGTTTAGCAGTTGGGATAAATaGCAGATGGCATCCATTACATACTTTGCTGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: IQTFCGFSSWDK*QMASITYFAVC Trigger: ACATACAGCAAAGTATGTAATGGATGCCATCTGTCATTTATCCCAACTGCTAAACCCACAGAAAGTCTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR TCA 72 bp | TCTCCCCAGAAAAATGTATATTCATCCAGGTCTGTCTaGATCAAGAAATCTGACAGTTCTAAAGGGACATAC | + |
|
Preference number: 3 (lower is better) Translates to: SPQKNVYSSRSV*IKKSDSSKGTY Trigger: GTATGTCCCTTTAGAACTGTCAGATTTCTTGATTCAGACAGACCTGGATGAATATACATTTTTCTGGGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR TCA 72 bp | TTCTGCCTCCCACAGCATCAAAGAGTCAGCCATGATTaGAATCTTTGTGTGAAAATAAACAAGTACACACAT | + |
|
Preference number: 3 (lower is better) Translates to: FCLPQHQRVSHD*NLCVKINKYTH Trigger: ATGTGTGTACTTGTTTATTTTCACACAAAGATTTCAATCATGGCTGACTCTTTGATGCTGTGGGAGGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| CDS-3UTR TCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACCATCGCTGGAGGTGTTaGAGAGCCGGAGTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHHRWRC*RAGVPE Trigger: CTCTGGAACTCCGGCTCTTCAACACCTCCAGCGATG...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR TCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACGCGTTTCTGTGTTGCTaGAGTCTCTCAGACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHAFLCC*SLSDSG Trigger: CCCACTGTCTGAGAGACTTCAGCAACACAGAAACGC...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACCCCGGTAAGACAGCTTaGTGTACCTGTGGAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHPGKTA*CTCGAV Trigger: AACAGCTCCACAGGTACACCAAGCTGTCTTACCGGG...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CAA 72 bp | GTTGCTGGGTCTTTGTGCTATCTCTGTGACCTGGGATaGGTCTCACGTGCCTCACAGCCACTGTCATCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLCYLCDLG*VSRASQPLSSP Trigger: AGGCGATGACAGTGGCTGTGAGGCACGTGAGACCAATCCCAGGTCACAGAGATAGCACAAAGACCCAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACGCTGTGGAAAAGGTCTaGCAGGCATGTCAACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHAVEKV*QACQQV Trigger: AACCTGTTGACATGCCTGGCAGACCTTTTCCACAGC...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACTCTTCTGCGTGGCAATaGTGTGGAAAAGGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHSSAWQ*CGKGLP Trigger: TGGCAGACCTTTTCCACAGCATTGCCACGCAGAAGA...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACCAACCAGGTCATACATaGGGTCCAGGTTCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHQPGHT*GPGSQH Trigger: ATGCTGTGAACCTGGACCGCATGTATGACCTGGTTG...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACCCAGAGCAGAGGCATTaGTGCCCATATTACAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHPEQRH*CPYYRW Trigger: CCATCTGTAATATGGGCACCAATGCCTCTGCTCTGG...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068058.14 |
||
| CDS-3UTR GCA 90 bp | TGCATGGGAAGGGGGCCCCCAGAAACCATTCAGGAAGCCTACCAAACACTCAGTTTGCTGGGCCTTGTATaGCAACACATTCTCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CMGRGPPETIQEAYQTLSLLGLV*QHILPE Trigger: TTCCGGGAGAATGTGTTGGCATACAAGGCCCAGCAA...ACTGAGTGTTTGGTAGGCTTCCTGAATGGTTTCTGGGGGCCCCCTTCCCATGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACAGCTTGGTGTACCTGTaGAGCTGTTCCATGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHSLVYL*SCSMYL Trigger: CAAGTACATGGAACAGCTCCACAGGTACACCAAGCT...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTAGCCACTGAGGGATCACAACTTGCAAAGGGCTGCTCTGACCTCCCAAAAGGAGAAAGGGGTGGGTaGAGCAAGCTGGCTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLATEGSQLAKGCSDLPKGERGG*SKLASQ Trigger: TTGGCTAGCCAGCTTGCTCCACCCACCCCTTTCTCC...TTTTGGGAGGTCAGAGCAGCCCTTTGCAAGTTGTGATCCCTCAGTGGCTAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| CDS-3UTR CCA 90 bp | GAAACGGAGCCTTTAAGTCGTGCATTTTGGTGGATGAGAAAGCTTGCTTCCACCTTGTCTCCCAGCAGGTaGAGGCGGAGAAAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETEPLSRAFWWMRKLASTLSPSR*RRRKGW Trigger: CCACCCCTTTCTCCGCCTCCACCTGCTGGGAGACAA...GGTGGAAGCAAGCTTTCTCATCCACCAAAATGCACGACTTAAAGGCTCCGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR CAA 72 bp | ATTCCTCGTCTTCCTCATCTAGGAACGATGCTGATGTaGACTGGCTATCGAGAACCCTGCCAGAGGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPRLPHLGTMLM*TGYREPCQRRS Trigger: TGACCGCCTCTGGCAGGGTTCTCGATAGCCAGTCAACATCAGCATCGTTCCTAGATGAGGAAGACGAGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR TCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACCTCTTTCCTCAGCCTTaGAATGAACTTCTTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHLFPQP*NELLWW Trigger: CCACCAAAGAAGTTCATTTCAAGGCTGAGGAAAGAG...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACTGTTTCTTCTCTTCCTaGAGGATGTCCGCAATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHCFFSS*RMSAIV Trigger: CACTATTGCGGACATCCTGCAGGAAGAGAAGAAACA...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | TGCATGGGAAGGGGGCCCCCAGAAACCATTCAGGAAGCCTACCAAACACTCAGTAAGTCTCTCAGACAGTaGGTGATGGAGGTGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CMGRGPPETIQEAYQTLSKSLRQ*VMEVFC Trigger: ACAGAACACCTCCATCACCCACTGTCTGAGAGACTT...ACTGAGTGTTTGGTAGGCTTCCTGAATGGTTTCTGGGGGCCCCCTTCCCATGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACTCTGAGCCTCCTGTTTaGTGCAACATGTTTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATILPLHPPPNTSCDPPHSEPPV*CNMFHN Trigger: ATTGTGAAACATGTTGCAGCAAACAGGAGGCTCAGA...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | TCCAACCACACAGTGGCCAAAATCAATCCAAATCAAACGCACGACGAAGCTGGGGACCCAGGTGAGTTCTaGCTTATTGTTCTCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNHTVAKINPNQTHDEAGDPGEF*LIVLGW Trigger: CCAGCCGAGAACAATAAGCCAGAACTCACCTGGGTC...CCCAGCTTCGTCGTGCGTTTGATTTGGATTGATTTTGGCCACTGTGTGGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| 3UTR CAA 72 bp | ACATACAAACCCCCATTGGGGACTGTTGCTGGGTCTTaGTGCTATCTCTGTGACCTGGGATTGGTCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TYKPPLGTVAGS*CYLCDLGLVSR Trigger: ACGTGAGACCAATCCCAGGTCACAGAGATAGCACAAAGACCCAGCAACAGTCCCCAATGGGGGTTTGTATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | TGCATGGGAAGGGGGCCCCCAGAAACCATTCAGGAAGCCTACCAAACACTCAGTTCATTGATCGGAAACTaGTCTGGTCCAATGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CMGRGPPETIQEAYQTLSSLIGN*SGPMSF Trigger: AAAAGACATTGGACCAGAGCAGTTTCCGATCAATGA...ACTGAGTGTTTGGTAGGCTTCCTGAATGGTTTCTGGGGGCCCCCTTCCCATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068058.14 |
||
| CDS-3UTR GCA 90 bp | TGCATGGGAAGGGGGCCCCCAGAAACCATTCAGGAAGCCTACCAAACACTCAGTGAGCCTCCTGTTTGCTaGAACATGTTTCACAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: CMGRGPPETIQEAYQTLSEPPVC*NMFHNN Trigger: ATTATTGTGAAACATGTTGCAGCAAACAGGAGGCTC...ACTGAGTGTTTGGTAGGCTTCCTGAATGGTTTCTGGGGGCCCCCTTCCCATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR TCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCACCCTCATCCTCTTCTaGGCCTCCTGTTTGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSTLILF*ASCLLQ Trigger: TTGCAGCAAACAGGAGGCTCAGAAGAGGATGAGGGT...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCCCCGGTAAGACAGCTTaGTGTACCTGTGGAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSPGKTA*CTCGAV Trigger: AACAGCTCCACAGGTACACCAAGCTGTCTTACCGGG...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGACCCTCATCCTCTTCTaGGCCTCCTGTTTGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKTLILF*ASCLLQ Trigger: TTGCAGCAAACAGGAGGCTCAGAAGAGGATGAGGGT...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTCATCGCTGGAGGTGTTaGAGAGCCGGAGTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLHKLKAMVAALTDEYLSHRWRC*RAGVPE Trigger: CTCTGGAACTCCGGCTCTTCAACACCTCCAGCGATG...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCGCTGTGGAAAAGGTCTaGCAGGCATGTCAACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSAVEKV*QACQQV Trigger: AACCTGTTGACATGCCTGGCAGACCTTTTCCACAGC...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCTCTTCTGCGTGGCAATaGTGTGGAAAAGGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSSSAWQ*CGKGLP Trigger: TGGCAGACCTTTTCCACAGCATTGCCACGCAGAAGA...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCCAACCAGGTCATACATaGGGTCCAGGTTCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSQPGHT*GPGSQH Trigger: ATGCTGTGAACCTGGACCGCATGTATGACCTGGTTG...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGTTGCTGGGCCTTGTATaGCAACACATTCTCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKLLGLV*QHILPE Trigger: TTCCGGGAGAATGTGTTGGCATACAAGGCCCAGCAA...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | TCACCTCTGAAAAACACCAAAGGTATTCTGCCTCCCACAGCATCAAAGAGTCAGTGTTTCTTCTCTTCCTaGAGGATGTCCGCAATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLKNTKGILPPTASKSQCFFSS*RMSAIV Trigger: CACTATTGCGGACATCCTGCAGGAAGAGAAGAAACA...CTGACTCTTTGATGCTGTGGGAGGCAGAATACCTTTGGTGTTTTTCAGAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| CDS-3UTR CCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCAGCTTGGTGTACCTGTaGAGCTGTTCCATGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSSLVYL*SCSMYL Trigger: CAAGTACATGGAACAGCTCCACAGGTACACCAAGCT...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| 3UTR CAA 72 bp | GTTTTGTCTGCTCCAGTGAAGAATGAGACATGTCCCTaGAAGCGTGAACAAATGAAGCGTTGGCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLSAPVKNETCP*KREQMKRWHAE Trigger: TTCAGCATGCCAACGCTTCATTTGTTCACGCTTCAAGGGACATGTCTCATTCTTCACTGGAGCAGACAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGACTTCTTTGGTGGGATaGCGCCAACCTTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKTSLVG*RQPSSS Trigger: AGAAGAAGAAGGTTGGCGTCATCCCACCAAAGAAGT...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCCTTATTGTTCTCGGCTaGTTCGTTCATGTTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSLIVLG*FVHVAV Trigger: AACGGCAACATGAACGAACCAGCCGAGAACAATAAG...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTGACCCAGGTGAGTTCTaGCTTATTGTTCTCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLHKLKAMVAALTDEYLSDPGEF*LIVLGW Trigger: CCAGCCGAGAACAATAAGCCAGAACTCACCTGGGTC...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGAAGTCTCTCAGACAGTaGGTGATGGAGGTGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKKSLRQ*VMEVFC Trigger: ACAGAACACCTCCATCACCCACTGTCTGAGAGACTT...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGGATCGGAAACTGCTCTaGTCCAATGTCTTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKDRKLL*SNVFFQ Trigger: CTGGAAAAAGACATTGGACCAGAGCAGTTTCCGATC...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068058.14 |
||
| CDS-3UTR CCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCAATGAACTTCTTTGGTaGGATGACGCCAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSNELLW*DDANLL Trigger: AAGAAGGTTGGCGTCATCCCACCAAAGAAGTTCATT...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTCGAAGTAGTGTTCATTaGTCGGAAACTGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HLHKLKAMVAALTDEYLSRSSVH*SETALV Trigger: GACCAGAGCAGTTTCCGATCAATGAACACTACTTCG...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068058.14 |
||
| CDS-3UTR TCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTACTTCTTTGGTGGGATaGCGCCAACCTTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLHKLKAMVAALTDEYLSTSLVG*RQPSSS Trigger: AGAAGAAGAAGGTTGGCGTCATCCCACCAAAGAAGT...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR TCA 90 bp | ACATACTTTGCTGTATGTCAAGTACATCTCAAATTAAACAGCCGCCACCAAATCTGGCTAGCCAATAAGTaGGTGCCAGATACTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TYFAVCQVHLKLNSRHQIWLANK*VPDTCL Trigger: GAGACAAGTATCTGGCACTCACTTATTGGCTAGCCA...GATTTGGTGGCGGCTGTTTAATTTGAGATGTACTTGACATACAGCAAAGTATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| CDS-3UTR TCA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCATGTGTTTCCAAAATTaGCCAATCCGAAGTAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSMCFQN*PIRSSV Trigger: AACACTACTTCGGATTGGTCAATTTTGGAAACACAT...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068058.14 |
||
| CDS-3UTR TCA 90 bp | CCTTCCATGTGCCAGATACAACCAAGTACACAGAATCATTCGAAAGCCAAAATAACTTGTCTCCAACACTaGGAGAAACATCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSMCQIQPSTQNHSKAKITCLQH*EKHHKE Trigger: TTCCTTGTGATGTTTCTCTCAGTGTTGGAGACAAGT...TATTTTGGCTTTCGAATGATTCTGTGTACTTGGTTGTATCTGGCACATGGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152408.3 |
||
| CDS-3UTR GCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTTCTGAGCCTCCTGTTTaGTGCAACATGTTTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLHKLKAMVAALTDEYLSSEPPV*CNMFHN Trigger: ATTGTGAAACATGTTGCAGCAAACAGGAGGCTCAGA...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTAATGAACTTCTTTGGTaGGATGACGCCAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLHKLKAMVAALTDEYLSNELLW*DDANLL Trigger: AAGAAGGTTGGCGTCATCCCACCAAAGAAGTTCATT...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR GCA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTGAGCCTCCTGTTTGCTaGAACATGTTTCACAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLHKLKAMVAALTDEYLSEPPVC*NMFHNN Trigger: ATTATTGTGAAACATGTTGCAGCAAACAGGAGGCTC...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACGCATCGCTGGAGGTGTaGAAGAGCCGGAGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATILPLHPPPNTSCDPPHASLEV*KSRSSR Trigger: TCTGGAACTCCGGCTCTTCAACACCTCCAGCGATGC...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACGTGAGTTCTGGCTTATaGTTCTCGGCTGGTTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATILPLHPPPNTSCDPPHVSSGL*FSAGSF Trigger: GAACGAACCAGCCGAGAACAATAAGCCAGAACTCAC...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACAGCTGTTCCATGTACTaGAACCTCTTGAGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATILPLHPPPNTSCDPPHSCSMY*NLLRCR Trigger: CCTGCACCTCAAGAGGTTCAAGTACATGGAACAGCT...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | TGCATGGGAAGGGGGCCCCCAGAAACCATTCAGGAAGCCTACCAAACACTCAGTGCAGAAGTACAGCGCTaGAAGCACGGAGTTACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CMGRGPPETIQEAYQTLSAEVQR*KHGVTV Trigger: TACTGTAACTCCGTGCTTCAAGCGCTGTACTTCTGC...ACTGAGTGTTTGGTAGGCTTCCTGAATGGTTTCTGGGGGCCCCCTTCCCATGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACATGTACTTGAACCTCTaGAGGTGCAGGGCCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: ATILPLHPPPNTSCDPPHMYLNL*RCRAKI Trigger: GATTTTGGCCCTGCACCTCAAGAGGTTCAAGTACAT...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | TGCATGGGAAGGGGGCCCCCAGAAACCATTCAGGAAGCCTACCAAACACTCAGTAGCTGTTCCATGTACTaGAACCTCTTGAGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CMGRGPPETIQEAYQTLSSCSMY*NLLRCR Trigger: CCTGCACCTCAAGAGGTTCAAGTACATGGAACAGCT...ACTGAGTGTTTGGTAGGCTTCCTGAATGGTTTCTGGGGGCCCCCTTCCCATGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | GCCACCATCTTACCTCTCCACCCACCTCCTAACACTTCCTGTGACCCACCTCACGAATTCCTCAATGGCTaGAGCGTCTATTTTCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ATILPLHPPPNTSCDPPHEFLNG*SVYFLY Trigger: GTAGAGAAAATAGACGCTCAAGCCATTGAGGAATTC...GTGAGGTGGGTCACAGGAAGTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCTCCAGAGCAGAGGCATaGGTGCCCATATTACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSSRAEA*VPILQM Trigger: CATCTGTAATATGGGCACCAATGCCTCTGCTCTGGA...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068058.14 |
||
| CDS-3UTR CAA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTGCATCGCTGGAGGTGTaGAAGAGCCGGAGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HLHKLKAMVAALTDEYLSASLEV*KSRSSR Trigger: TCTGGAACTCCGGCTCTTCAACACCTCCAGCGATGC...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGGCAGAAGTACAGCGCTaGAAGCACGGAGTTACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKAEVQR*KHGVTV Trigger: TACTGTAACTCCGTGCTTCAAGCGCTGTACTTCTGC...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCAGGGTTGAAAAGACAGTTTGAAAAGCTTAGCGGTACCAAACATGAGAAGATGTACTTGAACCTCTaGAGGTGCAGGGCCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SAGLKRQFEKLSGTKHEKMYLNL*RCRAKI Trigger: GATTTTGGCCCTGCACCTCAAGAGGTTCAAGTACAT...CTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | CACTTGCACAAACTTAAAGCTATGGTTGCAGCCCTAACAGATGAATATCTATCTGTGAGTTCTGGCTTATaGTTCTCGGCTGGTTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLHKLKAMVAALTDEYLSVSSGL*FSAGSF Trigger: GAACGAACCAGCCGAGAACAATAAGCCAGAACTCAC...AGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS-3UTR CAA 90 bp | GAGACCTTGGAATGGGAAAAACTGCATCAATGTAACAAGACTATGCACACCAGCGAATTCCTCAATGGCTaGAGCGTCTATTTTCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ETLEWEKLHQCNKTMHTSEFLNG*SVYFLY Trigger: GTAGAGAAAATAGACGCTCAAGCCATTGAGGAATTC...GCTGGTGTGCATAGTCTTGTTACATTGATGCAGTTTTTCCCATTCCAAGGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS CAA 72 bp | CACATTCTCCCGGAACGGCCGGCAGAAGTACAGCGCTaGAAGCACGGAGTTACAGTAGCATGTGTTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: HILPERPAEVQR*KHGVTVACVSK Trigger: TTTGGAAACACATGCTACTGTAACTCCGTGCTTCAAGCGCTGTACTTCTGCCGGCCGTTCCGGGAGAATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 ENSMUST00000145016.3 |
||
| CDS CAA 72 bp | GACAGCTTGGTGTACCTGTGGAGCTGTTCCATGTACTaGAACCTCTTGAGGTGCAGGGCCAAAATCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DSLVYLWSCSMY*NLLRCRAKIMG Trigger: GCCCATGATTTTGGCCCTGCACCTCAAGAGGTTCAAGTACATGGAACAGCTCCACAGGTACACCAAGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 |
||
| CDS CAA 90 bp | GTATGCCAACACATTCTCCCGGAACGGCCGGCAGAAGTACAGCGCTaGAAGCACGGAGTTACAGTAGCATGTGTTTCCAAACATATTACA | + |
|
Preference number: 6 (lower is better) Translates to: VCQHILPERPAEVQR*KHGVTVACVSKHIT Trigger: TGTAATATGTTTGGAAACACATGCTACTGTAACTCCGTGCTTCAAGCGCTGTACTTCTGCCGGCCGTTCCGGGAGAATGTGTTGGCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119154.8 |
||
| CDS TCA 72 bp | CAGTTCAAGCATCGAGTTTCGTTAGTGAGTGTTCCCTaGAAAATCTCGTGGACCCAGGTGAGTTCTGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: QFKHRVSLVSVP*KISWTQVSSGL Trigger: TAAGCCAGAACTCACCTGGGTCCACGAGATTTTTCAGGGAACACTCACTAACGAAACTCGATGCTTGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068058.14 ENSMUST00000119154.8 ENSMUST00000152408.3 |
||