Pregenerated sensors for USP45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040455Ensembl transcript IDs: ENSMUST00000040429.12, ENSMUST00000065111.15, ENSMUST00000108232.9, ENSMUST00000137293.8, ENSMUST00000148304.8, ENSMUST00000148647.3
Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGGAGGTGTGGGTGCTGCTCCGCGTGTCCGCAGGAATCACCCCTaGACCGCAGCAGCACAGGCTGCTTGGAAGCGATCTCGGGCTCCG | + |
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Preference number: 1 (lower is better) Translates to: VGGVGAAPRVRRNHP*TAAAQAAWKRSRAP Trigger: CGGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGCTGCGGTCCAGGGGTGATTCCTGCGGACACGCGGAGCAGCACCCACACCTCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR CCA 90 bp | ATGCGTCTCCTTGGCTTGTGGCAATTCACTTGCCAGTGGGAGGTGTaGGTGCTGCTCCGCGTGTCCGCAGGAATCACCCCTGGACCGCAG | + |
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Preference number: 1 (lower is better) Translates to: MRLLGLWQFTCQWEV*VLLRVSAGITPGPQ Trigger: CTGCGGTCCAGGGGTGATTCCTGCGGACACGCGGAGCAGCACCCACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR CCA 90 bp | CTCGCCACCATGCGTCTCCTTGGCTTGTGGCAATTCACTTGCCAGTaGGAGGTGTGGGTGCTGCTCCGCGTGTCCGCAGGAATCACCCCT | + |
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Preference number: 1 (lower is better) Translates to: LATMRLLGLWQFTCQ*EVWVLLRVSAGITP Trigger: AGGGGTGATTCCTGCGGACACGCGGAGCAGCACCCACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTGGCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR CCA 90 bp | CGCTTCCGCCATTTCCTCCTCGCCACCATGCGTCTCCTTGGCTTGTaGCAATTCACTTGCCAGTGGGAGGTGTGGGTGCTGCTCCGCGTG | + |
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Preference number: 1 (lower is better) Translates to: RFRHFLLATMRLLGL*QFTCQWEVWVLLRV Trigger: CACGCGGAGCAGCACCCACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGAAATGGCGGAAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR GCA 90 bp | TTCCTCCTCGCCACCATGCGTCTCCTTGGCTTGTGGCAATTCACTTaGCAGTGGGAGGTGTGGGTGCTGCTCCGCGTGTCCGCAGGAATC | + |
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Preference number: 1 (lower is better) Translates to: FLLATMRLLGLWQFT*QWEVWVLLRVSAGI Trigger: GATTCCTGCGGACACGCGGAGCAGCACCCACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR GCA 90 bp | GGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTaGCTCTGCCTCCCAAGTGCTGAATCTAAAGGCATGGGCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: GTCSVDQGVLELKST*LCLPSAESKGMGHH Trigger: ATGGTGGCCCATGCCTTTAGATTCAGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR TCA 90 bp | CACTCAGGGCTCTTGACTCTGGAACCACCTGCACATAGGTGTCGCTaGCATGGACCCAGTGGCCTCCCAATTCACCATCAGGTTCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: HSGLLTLEPPAHRCR*HGPSGLPIHHQVLS Trigger: TGAAAGAACCTGATGGTGAATTGGGAGGCCACTGGGTCCATGTCAGCGACACCTATGTGCAGGTGGTTCCAGAGTCAAGAGCCCTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR GCA 90 bp | GGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTaGCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGC | + |
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Preference number: 1 (lower is better) Translates to: GTCSVDQGVLELKST*LCLPSAGIKGMHNC Trigger: GCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108232.9 |
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| 3UTR TCA 90 bp | ATTCACCATCAGGTTCTTTCAAACCGGCTGCAGTCTTCCTCCCGGTaGTGCACTCGGACAGCTTCCTGGAGGGTACTCTCACTTTCACGT | + |
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Preference number: 1 (lower is better) Translates to: IHHQVLSNRLQSSSR*CTRTASWRVLSLSR Trigger: ACGTGAAAGTGAGAGTACCCTCCAGGAAGCTGTCCGAGTGCATCACCGGGAGGAAGACTGCAGCCGGTTTGAAAGAACCTGATGGTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR GCA 90 bp | GAAGGGATCCTTCATGGTAGAGATCTTGGTCTCCTCTGTCCTCACTaGATCCAACAGATGGTGCAGAAGCTCCTGGCTGTCCTGTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: EGILHGRDLGLLCPH*IQQMVQKLLAVLLL Trigger: CAGCAACAGGACAGCCAGGAGCTTCTGCACCATCTGTTGGATGCAGTGAGGACAGAGGAGACCAAGATCTCTACCATGAAGGATCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR CCA 90 bp | AGGGTACTCTCACTTTCACGTAAGCAGTGTAGTGGCCTCCTCTCATaGAGCCGCTGTGCTCCACTATACCGTAGAGACCGTAGAGAACCT | + |
|
Preference number: 1 (lower is better) Translates to: RVLSLSRKQCSGLLS*SRCAPLYRRDRREP Trigger: AGGTTCTCTACGGTCTCTACGGTATAGTGGAGCACAGCGGCTCCATGAGAGGAGGCCACTACACTGCTTACGTGAAAGTGAGAGTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR GCA 90 bp | TTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTaGTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: FSGKVSLCCLGFPGT*SVDQGVLELKSTCL Trigger: GAGGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
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| 3UTR CCA 90 bp | GCTGAGGGTGCTGGCAGGCGGGCTGGCTTCCAAGTTGTCATTCTTTaGGTGTGTAACAACAGTTTTCTCTTCTTCAGATGGCCATTTTCT | + |
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Preference number: 1 (lower is better) Translates to: AEGAGRRAGFQVVIL*VCNNSFLFFRWPFS Trigger: AGAAAATGGCCATCTGAAGAAGAGAAAACTGTTGTTACACACCCAAAGAATGACAACTTGGAAGCCAGCCCGCCTGCCAGCACCCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR GCA 90 bp | GGCAGATATGAGGAGTTGCTTCCTGGCATTGGTATAAACTCCTCCTaGTTTCTTTTCTGCGGAGCTGGTTTCTTTGTGGCACTTCCGTCT | + |
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Preference number: 1 (lower is better) Translates to: GRYEELLPGIGINSS*FLFCGAGFFVALPS Trigger: AGACGGAAGTGCCACAAAGAAACCAGCTCCGCAGAAAAGAAAGCAGGAGGAGTTTATACCAATGCCAGGAAGCAACTCCTCATATCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR CCA 90 bp | TCCTGGCATTGGTATAAACTCCTCCTGCTTTCTTTTCTGCGGAGCTaGTTTCTTTGTGGCACTTCCGTCTCTTTTCAGTACAGTCCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: SWHWYKLLLLSFLRS*FLCGTSVSFQYSPH Trigger: GTGAGGACTGTACTGAAAAGAGACGGAAGTGCCACAAAGAAACCAGCTCCGCAGAAAAGAAAGCAGGAGGAGTTTATACCAATGCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR GCA 90 bp | GCTTCCTGGAAGCTCTGGGTTGATGGGCATTTCCTACAGTCACGGTaGCCTTGTTATGATCTTGGTCTGTTTCTTGTAAACTTCTGCATT | + |
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Preference number: 1 (lower is better) Translates to: ASWKLWVDGHFLQSR*PCYDLGLFLVNFCI Trigger: AATGCAGAAGTTTACAAGAAACAGACCAAGATCATAACAAGGGCACCGTGACTGTAGGAAATGCCCATCAACCCAGAGCTTCCAGGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR GCA 90 bp | CTTCTCCCCCACACTTATATTCTTACAGGTAGCCGCACAGAACGGTaGCAAGTCAAGGGTAAGCGGAAAGTCTACATGTCTGTTTACTTT | + |
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Preference number: 1 (lower is better) Translates to: LLPHTYILTGSRTER*QVKGKRKVYMSVYF Trigger: AAAGTAAACAGACATGTAGACTTTCCGCTTACCCTTGACTTGGCACCGTTCTGTGCGGCTACCTGTAAGAATATAAGTGTGGGGGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR CCA 90 bp | CAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATCCTaGCTAAAGGTCTGGACAGTTTACAGCCTCTCTCCCTCACATTTG | + |
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Preference number: 1 (lower is better) Translates to: QHWGLYVTHVKKVPS*LKVWTVYSLSPSHL Trigger: CAAATGTGAGGGAGAGAGGCTGTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR TCA 90 bp | TTTACTTTACGAAGACTCAAGCCAGCCTGGTGGAATCTTTTAAGATaGAGGATTAGGATAGCAGGAACGGCAGATATGAGGAGTTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: FTLRRLKPAWWNLLR*RIRIAGTADMRSCF Trigger: GAAGCAACTCCTCATATCTGCCGTTCCTGCTATCCTAATCCTTCATCTTAAAAGATTCCACCAGGCTGGCTTGAGTCTTCGTAAAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR GCA 90 bp | TATTTGGGACATTTAGTGGCTGTTTTTCCCTGTGGAAATCTCTATTaGCAGTTACAGTGCCACTCAAATGAAGTTCAGCAATCGCTTCCG | + |
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Preference number: 1 (lower is better) Translates to: YLGHLVAVFPCGNLY*QLQCHSNEVQQSLP Trigger: CGGAAGCGATTGCTGAACTTCATTTGAGTGGCACTGTAACTGGCAATAGAGATTTCCACAGGGAAAAACAGCCACTAAATGTCCCAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR TCA 90 bp | GCATTTGTTTGGGGGTGTGGGTGCAACTGCTATGACAGGCTAGCTTaGACAAATAAATTATTTTTCTCATTCATTGCTCTGGTGCTAGAC | + |
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Preference number: 1 (lower is better) Translates to: AFVWGCGCNCYDRLA*TNKLFFSFIALVLD Trigger: GTCTAGCACCAGAGCAATGAATGAGAAAAATAATTTATTTGTTCAAGCTAGCCTGTCATAGCAGTTGCACCCACACCCCCAAACAAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR TCA 90 bp | AAAAACTTCTCTCTTTTACCTTTCAAATTCACGGTGCCAAAGCACTaGCTAGTTGTGCGGATCTGTAAACATTCTTGTTTGTTTGCACGG | + |
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Preference number: 1 (lower is better) Translates to: KNFSLLPFKFTVPKH*LVVRICKHSCLFAR Trigger: CCGTGCAAACAAACAAGAATGTTTACAGATCCGCACAACTAGTCAGTGCTTTGGCACCGTGAATTTGAAAGGTAAAAGAGAGAAGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
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| 3UTR CAA 90 bp | GCGTGTCCGCAGGAATCACCCCTGGACCGCAGCAGCACAGGCTGCTaGGAAGCGATCTCGGGCTCCGAAGCCTCGCTGTCGGCATCCACG | + |
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Preference number: 2 (lower is better) Translates to: ACPQESPLDRSSTGC*EAISGSEASLSAST Trigger: CGTGGATGCCGACAGCGAGGCTTCGGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGCTGCGGTCCAGGGGTGATTCCTGCGGACACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR CAA 90 bp | TTTCCTCCTCGCCACCATGCGTCTCCTTGGCTTGTGGCAATTCACTaGCCAGTGGGAGGTGTGGGTGCTGCTCCGCGTGTCCGCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: FPPRHHASPWLVAIH*PVGGVGAAPRVRRN Trigger: ATTCCTGCGGACACGCGGAGCAGCACCCACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR CAA 90 bp | AATCGCTTCCGCCATTTCCTCCTCGCCACCATGCGTCTCCTTGGCTaGTGGCAATTCACTTGCCAGTGGGAGGTGTGGGTGCTGCTCCGC | + |
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Preference number: 2 (lower is better) Translates to: NRFRHFLLATMRLLG*WQFTCQWEVWVLLR Trigger: GCGGAGCAGCACCCACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGAAATGGCGGAAGCGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGGGGACGCCTCAGTGCTaGGGGTGCTGGCAGGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: FQARFLCVVLAFLEPALWGTPQC*GCWQAG Trigger: GCCCGCCTGCCAGCACCCTCAGCACTGAGGCGTCCC...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR CCA 90 bp | GACATGGACCCAGTGGCCTCCCAATTCACCATCAGGTTCTTTCAAACCGGCTGCGCAGCACAGGCTGCTTaGAAGCGATCTCGGGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: DMDPVASQFTIRFFQTGCAAQAA*KRSRAP Trigger: CGGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGC...GCAGCCGGTTTGAAAGAACCTGATGGTGAATTGGGAGGCCACTGGGTCCATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR TCA 90 bp | GACATGGACCCAGTGGCCTCCCAATTCACCATCAGGTTCTTTCAAACCGGCTGCCTGGAAGCTCTGGGTTaGTGGGCATTTCCTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: DMDPVASQFTIRFFQTGCLEALG*WAFPTV Trigger: GACTGTAGGAAATGCCCATCAACCCAGAGCTTCCAG...GCAGCCGGTTTGAAAGAACCTGATGGTGAATTGGGAGGCCACTGGGTCCATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCCCGCTTGCATTTGTTTaGGGGTGTGGGTGCAACTGC | + |
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Preference number: 2 (lower is better) Translates to: LGFPGTCSVDQGVLELKSPLAFV*GCGCNC Trigger: GCAGTTGCACCCACACCCCCAAACAAATGCAAGCGG...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR CAA 90 bp | GTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTaGAACTCAAATCCACCTGCCTCTGCCTCCCAAGTGCTGAATCTA | + |
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Preference number: 2 (lower is better) Translates to: VVLAFLEPALWTRVS*NSNPPASASQVLNL Trigger: TAGATTCAGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAGACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR CAA 90 bp | GTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTaGAACTCAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGAATTA | + |
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Preference number: 2 (lower is better) Translates to: VVLAFLEPALWTRVS*NSNPPASASQVLEL Trigger: TAATTCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAGACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108232.9 |
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| 3UTR-3UTR TCA 90 bp | GACATGGACCCAGTGGCCTCCCAATTCACCATCAGGTTCTTTCAAACCGGCTGCGCATTTTGGGCACTGTaGAGCCTCGTATGTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: DMDPVASQFTIRFFQTGCAFWAL*SLVCFP Trigger: GGGAAAACATACGAGGCTTCACAGTGCCCAAAATGC...GCAGCCGGTTTGAAAGAACCTGATGGTGAATTGGGAGGCCACTGGGTCCATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCTCGTTAGGTGAGGAGTaGTTCCTGGAAGCTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LGFPGTCSVDQGVLELKSSLGEE*FLEALG Trigger: ACCCAGAGCTTCCAGGAAGCACTCCTCACCTAACGA...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR CCA 90 bp | GACATGGACCCAGTGGCCTCCCAATTCACCATCAGGTTCTTTCAAACCGGCTGCTTTAATGCCAGCACTTaGGAGGCAGAGGTAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: DMDPVASQFTIRFFQTGCFNAST*EAEVGG Trigger: TCCACCTACCTCTGCCTCCCAAGTGCTGGCATTAAA...GCAGCCGGTTTGAAAGAACCTGATGGTGAATTGGGAGGCCACTGGGTCCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGTGCTGGCAGGCGGGCTGGCTTCCAAGTTGTCATTCTTTGGGTGTGTAACTTCCTACAGTCACGGTaGCCTTGTTATGATCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: EGAGRRAGFQVVILWVCNFLQSR*PCYDLG Trigger: ACCAAGATCATAACAAGGGCACCGTGACTGTAGGAA...GTTACACACCCAAAGAATGACAACTTGGAAGCCAGCCCGCCTGCCAGCACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTGCAGAGCCCTGAGATaGTTTAAAGTGGGGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: FQARFLCVVLAFLEPALWCRALR*FKVGWC Trigger: GCACCACCCCACTTTAAATCATCTCAGGGCTCTGCA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGGTTTGGGGGTGTGGGTaGAACTGCTATGACAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: FQARFLCVVLAFLEPALWVWGCG*NCYDRL Trigger: TAGCCTGTCATAGCAGTTGCACCCACACCCCCAAAC...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCTCCTGGCTAAAGGTCTaGACAGTTTACAGCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LGFPGTCSVDQGVLELKSSWLKV*TVYSLS Trigger: AGAGAGGCTGTAAACTGTCCAGACCTTTAGCCAGGA...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCATGCCAGTGGGAGGTGTaGGTGCTGCTCCGCGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPCQWEV*VLLRVS Trigger: GGACACGCGGAGCAGCACCCACACCTCCCACTGGCA...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGAAAAGGCTGACCGCTTaGATTTGTTTGGGGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: FQARFLCVVLAFLEPALWKRLTA*ICLGVW Trigger: CCACACCCCCAAACAAATGCAAGCGGTCAGCCTTTT...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGCTGAATCTAAAGGCATaGGCCACCATCACTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: FQARFLCVVLAFLEPALWLNLKA*ATITQQ Trigger: CTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAG...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCCTGGAATTAAAGGCATaGACAACTGCCTGTCAAATT | + |
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Preference number: 2 (lower is better) Translates to: FLEPALWTRVSLNSNPPALELKA*TTACQI Trigger: AATTTGACAGGCAGTTGTGCATGCCTTTAATTCCAG...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAAGGAGGCAGAGGTAGGTaGATTTCTGAGTTCGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LCYCLFKGNRSGKSVSHEGGRGR*ISEFEA Trigger: GGCCTCGAACTCAGAAATCCACCTACCTCTGCCTCC...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCCTGGAAGCTCTGGGTTGATGGGCATTTCCTACAGTCACGGTGCCCTTGTTTCTATGATAGGAAGTaGGATATCAATGAAGGGATC | + |
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Preference number: 2 (lower is better) Translates to: ASWKLWVDGHFLQSRCPCFYDRK*DINEGI Trigger: GATCCCTTCATTGATATCTCACTTCCTATCATAGAA...ACAAGGGCACCGTGACTGTAGGAAATGCCCATCAACCCAGAGCTTCCAGGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGGTTCTTGTCGTTAGGTaGGGAGTGCTTCCTGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: AESKGMGHHHSAGFSVLKVLVVR*GVLPGS Trigger: GCTTCCAGGAAGCACTCCTCACCTAACGACAAGAAC...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGGTTTGGGGGTGTGGGTaGAACTGCTATGACAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: AESKGMGHHHSAGFSVLKVWGCG*NCYDRL Trigger: TAGCCTGTCATAGCAGTTGCACCCACACCCCCAAAC...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACATCCTCCTCGCCACCATaGGTCTCCTTGGCTTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: FLHNLKMSPLDNQFHPATSSSPP*VSLACG Trigger: GCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGA...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCAGAGCAGCTTATTGTTaGCCATTAATAACTCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: LGFPGTCSVDQGVLELKSRAAYC*PLITPW Trigger: CCATGGAGTTATTAATGGGCAACAATAAGCTGCTCT...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCATCAAGAGGCAACACTaGGGACTTTATGTTACACAT | + |
|
Preference number: 2 (lower is better) Translates to: LGFPGTCSVDQGVLELKSIKRQH*GLYVTH Trigger: ATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGAT...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGTCGCTGACATGGACCCAGTGGCCTCCCAATTCACCATCAGGTTCTTTCAAAGGCTGTTTTTCCCTGTaGAAATCTCTATTGCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VSLTWTQWPPNSPSGSFKGCFSL*KSLLPV Trigger: AACTGGCAATAGAGATTTCCACAGGGAAAAACAGCC...TTTGAAAGAACCTGATGGTGAATTGGGAGGCCACTGGGTCCATGTCAGCGACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGCAAAGTGATACAAAGTaGGTTCCAGGACAGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AESKGMGHHHSAGFSVLKQSDTK*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCACTTTGTATCACTTTG...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAAAGATCTGTCTGCCTCTaGCTCCCAAGTGCTGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: LCYCLFKGNRSGKSVSHERSVCL*LPSAGI Trigger: AATTCCAGCACTTGGGAGGCAGAGGCAGACAGATCT...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTCTACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGGTGGAATCTTTGTGGCAATTCACTTaGCAGTGGGAGGTGTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KVYMSVYFTKTQASLVESLWQFT*QWEVWV Trigger: CACCCACACCTCCCACTGGCAAGTGAATTGCCACAA...AGATTCCACCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTAGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTTGAATAGCCCTAGTTaGCCTCAAACAGAGATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: FQARFLCVVLAFLEPALWLNSPS*PQTEIC Trigger: ACAGATCTCTGTTTGAGGCCAACTAGGGCTATTCAA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAACTGAATCTAAAGGCATaGGCCACCATCACTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LCYCLFKGNRSGKSVSHELNLKA*ATITQQ Trigger: CTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAG...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAATTGTCTTGGCTTTCCTaGAACCTGCTCTGTGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: LCYCLFKGNRSGKSVSHELSWLS*NLLCGP Trigger: TGGTCCACAGAGCAGGTTCCAGGAAAGCCAAGACAA...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATAGTGGCCTCCTCTCATaGAGCCGCTGTGCTCCACTA | + |
|
Preference number: 2 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHSGLLS*SRCAPL Trigger: TAGTGGAGCACAGCGGCTCCATGAGAGGAGGCCACT...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGTGGGTGCAACTGCTATaGCAGGCTAGCTTGAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: AESKGMGHHHSAGFSVLKWVQLL*QASLNK Trigger: TTTGTTCAAGCTAGCCTGTCATAGCAGTTGCACCCA...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGGAGGCAGAGGTAGGTaGATTTCTGAGTTCGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KIALLIYDHPLDHLHKQSGGRGR*ISEFEA Trigger: GGCCTCGAACTCAGAAATCCACCTACCTCTGCCTCC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGATCAAGAGGCAACACTaGGGACTTTATGTTACACAT | + |
|
Preference number: 2 (lower is better) Translates to: FQARFLCVVLAFLEPALWIKRQH*GLYVTH Trigger: ATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGAT...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCTTTAGAGGACACAACTaGGCTCTACAGATAAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: LGFPGTCSVDQGVLELKSFRGHN*ALQIKY Trigger: ATATTTTATCTGTAGAGCCCAGTTGTGTCCTCTAAA...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATCCGCTTGCATTTGTTTaGGGGTGTGGGTGCAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHPLAFV*GCGCNC Trigger: GCAGTTGCACCCACACCCCCAAACAAATGCAAGCGG...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAATTCTCTGTGTTGTCTTaGCTTTCCTGGAACCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LCYCLFKGNRSGKSVSHEFSVLS*LSWNLL Trigger: GAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAA...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR CAA 90 bp | GTGTCCCATGAAAGTAGCCAAGCCCACCTGAATATTTTCTTTGTTTaGCTAGGGATGGAACCAGGCAAGTGCTTTGCCATTGAACTACAA | + |
|
Preference number: 2 (lower is better) Translates to: VSHESSQAHLNIFFV*LGMEPGKCFAIELQ Trigger: TTGTAGTTCAATGGCAAAGCACTTGCCTGGTTCCATCCCTAGCAAAACAAAGAAAATATTCAGGTGGGCTTGGCTACTTTCATGGGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACCAAAGTGATACAAAGTaGGTTCCAGGACAGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYQSDTK*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCACTTTGTATCACTTTG...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCAAAAAGGCTGACCGCTTaGATTTGTTTGGGGGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPKRLTA*ICLGVW Trigger: CCACACCCCCAAACAAATGCAAGCGGTCAGCCTTTT...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCAAAATCCACCTGCCTCTaGCTCCCAAGTGCTGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPKSTCL*LPSAES Trigger: AGATTCAGCACTTGGGAGGCAGAGGCAGGTGGATTT...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATGAACTCAAATCCACCTaGCTCTGCCTCCCAAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHELKST*LCLPSA Trigger: AGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTC...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGAACTCAAATCCACCTaGCTCTGCCTCCCAAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KIALLIYDHPLDHLHKQSELKST*LCLPSA Trigger: AGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGAAGACAAGGTTTTATTaGATAGCCCTAGTTGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AESKGMGHHHSAGFSVLKKTRFY*IALVGL Trigger: GAGGCCAACTAGGGCTATTCAATAAAACCTTGTCTT...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACACAAAGTGATACAAAGTaGGTTCCAGGACAGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FLHNLKMSPLDNQFHPATQSDTK*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCACTTTGTATCACTTTG...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGGTAGCCAAGCCCACCTaGATATTTTCTTTGTTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: AESKGMGHHHSAGFSVLKVAKPT*IFSLFC Trigger: GCAAAACAAAGAAAATATTCAGGTGGGCTTGGCTAC...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTAAAGGTCTGGACAGTTTACAGCCTCTCTCCCTCACATTTGCCCATAGAAAAATGTTTTCTGTCATaGCTTAGTTGGTTCTTGTCG | + |
|
Preference number: 2 (lower is better) Translates to: WLKVWTVYSLSPSHLPIEKCFLS*LSWFLS Trigger: CGACAAGAACCAACTAAGTCATGACAGAAAACATTT...TTCTATGGGCAAATGTGAGGGAGAGAGGCTGTAAACTGTCCAGACCTTTAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTCTACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGGTGGAATCTATAACTCCATGGATGTaGACTGGTAGAGACAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: KVYMSVYFTKTQASLVESITPWM*TGRDRT Trigger: AGTCCTGTCTCTACCAGTTCACATCCATGGAGTTAT...AGATTCCACCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTAGACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAAATGGAACCAGGCAAGTaGTTTGCCATTGAACTACAA | + |
|
Preference number: 2 (lower is better) Translates to: LCYCLFKGNRSGKSVSHEMEPGK*FAIELQ Trigger: TTGTAGTTCAATGGCAAAGCACTTGCCTGGTTCCAT...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTGAACTCAAATCCACCTaGCTCTGCCTCCCAAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GDISQLHFTKTFHIFRISELKST*LCLPSA Trigger: AGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTC...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGTTGAATAGCCCTAGTTaGCCTCAAACAGAGATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AESKGMGHHHSAGFSVLKLNSPS*PQTEIC Trigger: ACAGATCTCTGTTTGAGGCCAACTAGGGCTATTCAA...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTTTTAATGCCAGCACTTaGGAGGCAGAGGTAGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KIALLIYDHPLDHLHKQSFNAST*EAEVGG Trigger: TCCACCTACCTCTGCCTCCCAAGTGCTGGCATTAAA...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACTCCTGGCTAAAGGTCTaGACAGTTTACAGCCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYSWLKV*TVYSLS Trigger: AGAGAGGCTGTAAACTGTCCAGACCTTTAGCCAGGA...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGCAAGTTGTCATTCTTTaGGTGTGTAACAACAGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: FQARFLCVVLAFLEPALWQVVIL*VCNNSF Trigger: AAAACTGTTGTTACACACCCAAAGAATGACAACTTG...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAACTGGAATTAAAGGCATaGACAACTGCCTGTCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: LCYCLFKGNRSGKSVSHELELKA*TTACQI Trigger: AATTTGACAGGCAGTTGTGCATGCCTTTAATTCCAG...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGTATCATAGAGGGGGTTaGTTTACTATCAACTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: AESKGMGHHHSAGFSVLKYHRGG*FTINSV Trigger: CACAGAGTTGATAGTAAAGCAACCCCCTCTATGATA...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTAAAGGTCTGGACAGTTTACAGCCTCTCTCCCTCACATTTGCCCATAGAAACTATTCTGTGTTACTaGTTATTTAAGGGGAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: WLKVWTVYSLSPSHLPIETILCY*LFKGNR Trigger: TCTGTTCCCCTTAAATAAGCAGTAACACAGAATAGT...TTCTATGGGCAAATGTGAGGGAGAGAGGCTGTAAACTGTCCAGACCTTTAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTAAATCCACCTGCCTCTaGCTCCCAAGTGCTGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: GDISQLHFTKTFHIFRISKSTCL*LPSAES Trigger: AGATTCAGCACTTGGGAGGCAGAGGCAGGTGGATTT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTTTAATGCCAGCACTTaGGAGGCAGAGGTAGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GDISQLHFTKTFHIFRISFNAST*EAEVGG Trigger: TCCACCTACCTCTGCCTCCCAAGTGCTGGCATTAAA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAAATTTTTCTCATTCATTaGTCTGGTGCTAGACTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LCYCLFKGNRSGKSVSHEIFLIH*SGARLF Trigger: GAAGAGTCTAGCACCAGAGCAATGAATGAGAAAAAT...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACATCCTGCTTTCTTTTCTaGGGAGCTGGTTTCTTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FLHNLKMSPLDNQFHPATSCFLF*GAGFFV Trigger: CACAAAGAAACCAGCTCCGCAGAAAAGAAAGCAGGA...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGTAGCCAAGCCCACCTaGATATTTTCTTTGTTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: KIALLIYDHPLDHLHKQSVAKPT*IFSLFC Trigger: GCAAAACAAAGAAAATATTCAGGTGGGCTTGGCTAC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTACGGTGCCCTTGTTATaGTCTTGGTCTGTTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GDISQLHFTKTFHIFRISTVPLL*SWSVSC Trigger: ACAAGAAACAGACCAAGATCATAACAAGGGCACCGT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTGAGACAGGACTGGACTaGGCATTCTTTAGAAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GDISQLHFTKTFHIFRISETGLD*AFFRSS Trigger: ACTACTTCTAAAGAATGCTCAGTCCAGTCCTGTCTC...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCATATCATAGAGGGGGTTaGTTTACTATCAACTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPYHRGG*FTINSV Trigger: CACAGAGTTGATAGTAAAGCAACCCCCTCTATGATA...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTCTGGAATTAAAGGCATaGACAACTGCCTGTCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: KIALLIYDHPLDHLHKQSLELKA*TTACQI Trigger: AATTTGACAGGCAGTTGTGCATGCCTTTAATTCCAG...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACACTGGAATTAAAGGCATaGACAACTGCCTGTCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: FLHNLKMSPLDNQFHPATLELKA*TTACQI Trigger: AATTTGACAGGCAGTTGTGCATGCCTTTAATTCCAG...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTATGGAACCAGGCAAGTaGTTTGCCATTGAACTACAA | + |
|
Preference number: 2 (lower is better) Translates to: GDISQLHFTKTFHIFRISMEPGK*FAIELQ Trigger: TTGTAGTTCAATGGCAAAGCACTTGCCTGGTTCCAT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTTGAATAGCCCTAGTTaGCCTCAAACAGAGATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GDISQLHFTKTFHIFRISLNSPS*PQTEIC Trigger: ACAGATCTCTGTTTGAGGCCAACTAGGGCTATTCAA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTTCCTACATTTTCAGGTaGCAAGAAAAACACTCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KIALLIYDHPLDHLHKQSSYIFR*QEKHSN Trigger: GTTTGAGTGTTTTTCTTGTCACCTGAAAATGTAGGA...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTTGGTTTAGGTTTATATaGCCAGATGTCATGCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KIALLIYDHPLDHLHKQSWFRFI*PDVMQK Trigger: TTTCTGCATGACATCTGGTCATATAAACCTAAACCA...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTATTTTTCTCATTCATTaGTCTGGTGCTAGACTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KIALLIYDHPLDHLHKQSIFLIH*SGARLF Trigger: GAAGAGTCTAGCACCAGAGCAATGAATGAGAAAAAT...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACTTTAGAGGACACAACTaGGCTCTACAGATAAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYFRGHN*ALQIKY Trigger: ATATTTTATCTGTAGAGCCCAGTTGTGTCCTCTAAA...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTCCTACATTTTCAGGTaGCAAGAAAAACACTCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GDISQLHFTKTFHIFRISSYIFR*QEKHSN Trigger: GTTTGAGTGTTTTTCTTGTCACCTGAAAATGTAGGA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTATTTTTCTCATTCATTaGTCTGGTGCTAGACTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: GDISQLHFTKTFHIFRISIFLIH*SGARLF Trigger: GAAGAGTCTAGCACCAGAGCAATGAATGAGAAAAAT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATTTTAGAGGACACAACTaGGCTCTACAGATAAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHFRGHN*ALQIKY Trigger: ATATTTTATCTGTAGAGCCCAGTTGTGTCCTCTAAA...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR CAA 90 bp | GCAGAAATCATTTCTCTAATACTGCAATGGATGCTAGCTGAAAGCTaGATTTTATCGCACATATTTGGTTTAGGTTTATATGACCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: AEIISLILQWMLAES*ILSHIFGLGLYDQM Trigger: CATCTGGTCATATAAACCTAAACCAAATATGTGCGATAAAATCAAGCTTTCAGCTAGCATCCATTGCAGTATTAGAGAAATGATTTCTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR CCA 72 bp | GTGGGTGCTGCTCCGCGTGTCCGCAGGAATCACCCCTaGACCGCAGCAGCACAGGCTGCTTGGAAGCGATCT | + |
|
Preference number: 3 (lower is better) Translates to: VGAAPRVRRNHP*TAAAQAAWKRS Trigger: AGATCGCTTCCAAGCAGCCTGTGCTGCTGCGGTCCAGGGGTGATTCCTGCGGACACGCGGAGCAGCACCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | GCCACCATGCGTCTCCTTGGCTTGTGGCAATTCACTTaGCAGTGGGAGGTGTGGGTGCTGCTCCGCGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ATMRLLGLWQFT*QWEVWVLLRVS Trigger: GGACACGCGGAGCAGCACCCACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR CCA 72 bp | ATGCGTCTCCTTGGCTTGTGGCAATTCACTTGCCAGTaGGAGGTGTGGGTGCTGCTCCGCGTGTCCGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MRLLGLWQFTCQ*EVWVLLRVSAG Trigger: TCCTGCGGACACGCGGAGCAGCACCCACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCAGCAGCACAGGCTGCTaGGAAGCGATCTCGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGFPGTCSVDQGVLELKSSSTGC*EAISGS Trigger: GGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGCT...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR CCA 72 bp | CAGGCAGTGGTGGCGCACGCCTTTAATGCCAGCACTTaGGAGGCAGAGGTAGGTGGATTTCTGAGTTCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QAVVAHAFNAST*EAEVGGFLSSR Trigger: CCTCGAACTCAGAAATCCACCTACCTCTGCCTCCCAAGTGCTGGCATTAAAGGCGTGCGCCACCACTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR CCA 72 bp | CTTCCGCCATTTCCTCCTCGCCACCATGCGTCTCCTTaGCTTGTGGCAATTCACTTGCCAGTGGGAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LPPFPPRHHASP*LVAIHLPVGGV Trigger: CACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGAAATGGCGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR TCA 72 bp | CTCTTGACTCTGGAACCACCTGCACATAGGTGTCGCTaGCATGGACCCAGTGGCCTCCCAATTCACCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLTLEPPAHRCR*HGPSGLPIHHQ Trigger: CTGATGGTGAATTGGGAGGCCACTGGGTCCATGTCAGCGACACCTATGTGCAGGTGGTTCCAGAGTCAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | GACCAGGGTGTCCTTGAACTCAAATCCACCTGCCTCTaGCTCCCAAGTGCTGAATCTAAAGGCATGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DQGVLELKSTCL*LPSAESKGMGH Trigger: GTGGCCCATGCCTTTAGATTCAGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTCAAGGACACCCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | TCAGCAATCGCTTCCGCCATTTCCTCCTCGCCACCATaGGTCTCCTTGGCTTGTGGCAATTCACTTGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SAIASAISSSPP*VSLACGNSLAS Trigger: ACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGAAATGGCGGAAGCGATTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | GACATGGACCCAGTGGCCTCCCAATTCACCATCAGGTTCTTTCAAACCGGCTGCCCTGGAAGCTCTGGGTaGATGGGCATTTCCTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: DMDPVASQFTIRFFQTGCPGSSG*MGISYS Trigger: ACTGTAGGAAATGCCCATCAACCCAGAGCTTCCAGG...GCAGCCGGTTTGAAAGAACCTGATGGTGAATTGGGAGGCCACTGGGTCCATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | TTGGTCTCCTCTGTCCTCACTGCATCCAACAGATGGTaGAGAAGCTCCTGGCTGTCCTGTTGCTGGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: LVSSVLTASNRW*RSSWLSCCWKP Trigger: AGGTTTCCAGCAACAGGACAGCCAGGAGCTTCTGCACCATCTGTTGGATGCAGTGAGGACAGAGGAGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR CCA 72 bp | CTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTaGACCAGGGTGTCCTTGAACTCAAATCCACCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LCVVLAFLEPAL*TRVSLNSNPPA Trigger: GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR CCA 72 bp | TCACTTTCACGTAAGCAGTGTAGTGGCCTCCTCTCATaGAGCCGCTGTGCTCCACTATACCGTAGAGACCGT | + |
|
Preference number: 3 (lower is better) Translates to: SLSRKQCSGLLS*SRCAPLYRRDR Trigger: ACGGTCTCTACGGTATAGTGGAGCACAGCGGCTCCATGAGAGGAGGCCACTACACTGCTTACGTGAAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR TCA 72 bp | TCGTTAGGTGAGGAGTGCTTCCTGGAAGCTCTGGGTTaGTGGGCATTTCCTACAGTCACGGTGCCCTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLGEECFLEALG*WAFPTVTVPLL Trigger: TAACAAGGGCACCGTGACTGTAGGAAATGCCCATCAACCCAGAGCTTCCAGGAAGCACTCCTCACCTAACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | GCCCTAGTTGGCCTCAAACAGAGATCTGTCTGCCTCTaGCTCCCAAGTGCTGGAATTAAAGGCATGCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALVGLKQRSVCL*LPSAGIKGMHN Trigger: GTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGATCTCTGTTTGAGGCCAACTAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | TCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTaGCTCTGCCTCCCAAGTGCTGAATCTAAAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: SVDQGVLELKST*LCLPSAESKGM Trigger: CATGCCTTTAGATTCAGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | GACCAGGGTGTCCTTGAACTCAAATCCACCTGCCTCTaGCTCCCAAGTGCTGGAATTAAAGGCATGCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: DQGVLELKSTCL*LPSAGIKGMHN Trigger: GTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTCAAGGACACCCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108232.9 |
||
| 3UTR GCA 72 bp | TCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTaGCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: SVDQGVLELKST*LCLPSAGIKGM Trigger: CATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108232.9 |
||
| 3UTR GCA 72 bp | CTTCATGGTAGAGATCTTGGTCTCCTCTGTCCTCACTaGATCCAACAGATGGTGCAGAAGCTCCTGGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LHGRDLGLLCPH*IQQMVQKLLAV Trigger: GACAGCCAGGAGCTTCTGCACCATCTGTTGGATGCAGTGAGGACAGAGGAGACCAAGATCTCTACCATGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCTTTAAAAATATAGATTaGAGCCAGGCAGTGGTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: LGFPGTCSVDQGVLELKSFKNID*SQAVVA Trigger: CGCCACCACTGCCTGGCTCAAATCTATATTTTTAAA...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAAACCGCTTGCATTTGTTaGGGGGTGTGGGTGCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LCYCLFKGNRSGKSVSHETACIC*GVWVQL Trigger: CAGTTGCACCCACACCCCCAAACAAATGCAAGCGGT...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGCCTGAGGATTCACCACATGTaGAAAGAGTTAAATAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: SVCLCLPSAGIKGMHNCLRIHHM*KELNNA Trigger: AGCGTTATTTAACTCTTTCAACATGTGGTGAATCCT...CAGGCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACCTTGTGGCAATTCACTaGCCAGTGGGAGGTGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYLVAIH*PVGGVG Trigger: ACCCACACCTCCCACTGGCAAGTGAATTGCCACAAG...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | CACACTTATATTCTTACAGGTAGCCGCACAGAACGGTaGCAAGTCAAGGGTAAGCGGAAAGTCTACATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HTYILTGSRTER*QVKGKRKVYMS Trigger: AGACATGTAGACTTTCCGCTTACCCTTGACTTGGCACCGTTCTGTGCGGCTACCTGTAAGAATATAAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTACCGCTTGCATTTGTTaGGGGGTGTGGGTGCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: KIALLIYDHPLDHLHKQSTACIC*GVWVQL Trigger: CAGTTGCACCCACACCCCCAAACAAATGCAAGCGGT...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | AAGCTCTGGGTTGATGGGCATTTCCTACAGTCACGGTaGCCTTGTTATGATCTTGGTCTGTTTCTTGTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KLWVDGHFLQSR*PCYDLGLFLVN Trigger: GTTTACAAGAAACAGACCAAGATCATAACAAGGGCACCGTGACTGTAGGAAATGCCCATCAACCCAGAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR CCA 72 bp | GGACTTTATGTTACACATGTTAAGAAGGTTCCATCCTaGCTAAAGGTCTGGACAGTTTACAGCCTCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GLYVTHVKKVPS*LKVWTVYSLSP Trigger: GGGAGAGAGGCTGTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATAAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGAGGATTCACCACATGTaGAAAGAGTTAAATAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: FQARFLCVVLAFLEPALWRIHHM*KELNNA Trigger: AGCGTTATTTAACTCTTTCAACATGTGGTGAATCCT...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTGGACCAGGGTGTCCTaGAACTCAAATCCACCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GDISQLHFTKTFHIFRISWTRVS*NSNPPA Trigger: GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR CCA 72 bp | ATATTTCAAGACAAGGTTTTATTGAATAGCCCTAGTTaGCCTCAAACAGAGATCTGTCTGCCTCTGCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IFQDKVLLNSPS*PQTEICLPLPP Trigger: GGGAGGCAGAGGCAGACAGATCTCTGTTTGAGGCCAACTAGGGCTATTCAATAAAACCTTGTCTTGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGAGGATTCACCACATGTaGAAAGAGTTAAATAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: VFQARFLCVVLAFLEPALRIHHM*KELNNA Trigger: AGCGTTATTTAACTCTTTCAACATGTGGTGAATCCT...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGCTGATGACTAAGACATaGAACCTGTTCCCTTACATC | + |
|
Preference number: 3 (lower is better) Translates to: AESKGMGHHHSAGFSVLKLMTKT*NLFPYI Trigger: GATGTAAGGGAACAGGTTCAATGTCTTAGTCATCAG...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAACAGAGCAGCTTATTGTaGCCCATTAATAACTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: LCYCLFKGNRSGKSVSHEQSSLL*PINNSM Trigger: CATGGAGTTATTAATGGGCAACAATAAGCTGCTCTG...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR TCA 72 bp | CTCCATGGATGTGAACTGGTAGAGACAGGACTGGACTaGGCATTCTTTAGAAGTAGTTACATAACTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LHGCELVETGLD*AFFRSSYITLR Trigger: TCTCAGAGTTATGTAACTACTTCTAAAGAATGCTCAGTCCAGTCCTGTCTCTACCAGTTCACATCCATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR CCA 72 bp | ATCAGTTTCACCCAGCCACATATCAAGAGGCAACACTaGGGACTTTATGTTACACATGTTAAGAAGGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ISFTQPHIKRQH*GLYVTHVKKVP Trigger: TGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATATGTGGCTGGGTGAAACTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTTTTCTCTGTGTTGTCTaGGCTTTCCTGGAACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KIALLIYDHPLDHLHKQSFLCVV*AFLEPA Trigger: AGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAA...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR GCA 72 bp | CATTTAGTGGCTGTTTTTCCCTGTGGAAATCTCTATTaGCAGTTACAGTGCCACTCAAATGAAGTTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HLVAVFPCGNLY*QLQCHSNEVQQ Trigger: TTGCTGAACTTCATTTGAGTGGCACTGTAACTGGCAATAGAGATTTCCACAGGGAAAAACAGCCACTAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACTATATGATCATCCCCTaGACCACCTACATAAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYYMIIP*TTYISS Trigger: ACTGCTTATGTAGGTGGTCAAGGGGATGATCATATA...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCACACATGACTGTGCTAGTTAATTCGCCAATAAAGATGCGATCTATGAAGTCATCATCAGCAGTCTaGGTAGTTGGGTTGTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSHMTVLVNSPIKMRSMKSSSAV*VVGLLK Trigger: CTTCAACAACCCAACTACCAAGACTGCTGATGATGA...CTTCATAGATCGCATCTTTATTGGCGAATTAACTAGCACAGTCATGTGTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148647.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACACTGATGACTAAGACATaGAACCTGTTCCCTTACATC | + |
|
Preference number: 3 (lower is better) Translates to: FLHNLKMSPLDNQFHPATLMTKT*NLFPYI Trigger: GATGTAAGGGAACAGGTTCAATGTCTTAGTCATCAG...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACATCACAGAGCAGCTTATaGTTGCCCATTAATAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: FLHNLKMSPLDNQFHPATSQSSL*LPINNS Trigger: GGAGTTATTAATGGGCAACAATAAGCTGCTCTGTGA...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR TCA 72 bp | TCTTCAGATGGCCATTTTCTTAAATGTTTTCTGTCATaGCTTAGTTGGTTCTTGTCGTTAGGTGAGGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSDGHFLKCFLS*LSWFLSLGEEC Trigger: GCACTCCTCACCTAACGACAAGAACCAACTAAGTCATGACAGAAAACATTTAAGAAAATGGCCATCTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACAGGATTCACCACATGTaGAAAGAGTTAAATAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYRIHHM*KELNNA Trigger: AGCGTTATTTAACTCTTTCAACATGTGGTGAATCCT...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATAATATTTTCTTTGTTTaGCTAGGGATGGAACCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHNIFFV*LGMEPG Trigger: GCCTGGTTCCATCCCTAGCAAAACAAAGAAAATATT...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTAATATTTTCTTTGTTTaGCTAGGGATGGAACCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GDISQLHFTKTFHIFRISNIFFV*LGMEPG Trigger: GCCTGGTTCCATCCCTAGCAAAACAAAGAAAATATT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATGGTAAAATAGCTCTGTaGATATATGATCATCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHGKIAL*IYDHPL Trigger: AAGGGGATGATCATATATCAACAGAGCTATTTTACC...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACAGGTAAAATAGCTCTGTaGATATATGATCATCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLHNLKMSPLDNQFHPATGKIAL*IYDHPL Trigger: AAGGGGATGATCATATATCAACAGAGCTATTTTACC...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| 3UTR CAA 72 bp | CAGGAATCACCCCTGGACCGCAGCAGCACAGGCTGCTaGGAAGCGATCTCGGGCTCCGAAGCCTCGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QESPLDRSSTGC*EAISGSEASLS Trigger: CGACAGCGAGGCTTCGGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGCTGCGGTCCAGGGGTGATTCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGCCTGGGGACGCCTCAGTGCTaGGGGTGCTGGCAGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVCLCLPSAGIKGMHNCLGTPQC*GCWQAG Trigger: GCCCGCCTGCCAGCACCCTCAGCACTGAGGCGTCCC...CAGGCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| 3UTR CAA 72 bp | CGCCACCATGCGTCTCCTTGGCTTGTGGCAATTCACTaGCCAGTGGGAGGTGTGGGTGCTGCTCCGCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHHASPWLVAIH*PVGGVGAAPRV Trigger: GACACGCGGAGCAGCACCCACACCTCCCACTGGCAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGGGGACGCCTCAGTGCTaGGGGTGCTGGCAGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALGTPQC*GCWQAG Trigger: GCCCGCCTGCCAGCACCCTCAGCACTGAGGCGTCCC...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCCGCAGGAATCACCCCTaGACCGCAGCAGCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGFPGTCSVDQGVLELKSRRNHP*TAAAQA Trigger: AGCCTGTGCTGCTGCGGTCCAGGGGTGATTCCTGCG...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTGCCAGTGGGAGGTGTaGGTGCTGCTCCGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWCQWEV*VLLRVS Trigger: GGACACGCGGAGCAGCACCCACACCTCCCACTGGCA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCAGTGGCCTCCTCTCATaGAGCCGCTGTGCTCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPASGLLS*SRCAPL Trigger: TAGTGGAGCACAGCGGCTCCATGAGAGGAGGCCACT...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTCCTCCTCGCCACCATaGGTCTCCTTGGCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWSSSPP*VSLACG Trigger: GCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCTCGTTAGGTGAGGAGTaGTTCCTGGAAGCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPASLGEE*FLEALG Trigger: ACCCAGAGCTTCCAGGAAGCACTCCTCACCTAACGA...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGGCAGCACAGGCTGCTTaGAAGCGATCTCGGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALAAQAA*KRSRAP Trigger: CGGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGC...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCCTGACATGGACCCAGTaGCCTCCCAATTCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPALTWTQ*PPNSPS Trigger: TGATGGTGAATTGGGAGGCCACTGGGTCCATGTCAG...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTGCACTCAGGGCTCTTaGCTCTGGAACCACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWCTQGS*LWNHLH Trigger: GTGCAGGTGGTTCCAGAGTCAAGAGCCCTGAGTGCA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCCTGGAAGCTCTGGGTTaGTGGGCATTTCCTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGFPGTCSVDQGVLELKSLEALG*WAFPTV Trigger: GACTGTAGGAAATGCCCATCAACCCAGAGCTTCCAG...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTCCTCCTCGCCACCATaGGTCTCCTTGGCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALSSSPP*VSLACG Trigger: GCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGA...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCCTGATGACAACACAATaGGACTCTGTCCCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPALMTTQ*DSVPEL Trigger: GAGCTCTGGGACAGAGTCCCATTGTGTTGTCATCAG...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR CAA 72 bp | CCCAAGGTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTaGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PKVFQARFLCVV*AFLEPALWTRV Trigger: CACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAACCTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| 3UTR CAA 72 bp | GTGCTGAGGGTGCTGGCAGGCGGGCTGGCTTCCAAGTaGTCATTCTTTGGGTGTGTAACAACAGTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLRVLAGGLASK*SFFGCVTTVFS Trigger: AGAGAAAACTGTTGTTACACACCCAAAGAATGACAACTTGGAAGCCAGCCCGCCTGCCAGCACCCTCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGAAACAGGAACAAGGCTaGCGTCAGTGGTCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWKQEQG*RQWSWA Trigger: AGCCCAGGACCACTGACGTCAGCCTTGTTCCTGTTT...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGCCTGGCCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVCLCLPSAGIKGMHNCLASFML*RNRNKA Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGGC...CAGGCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | TCTGTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGCCTGGCATTTTGGGCACTGTaGAGCCTCGTATGTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVCLCLPSAGIKGMHNCLAFWAL*SLVCFP Trigger: GGGAAAACATACGAGGCTTCACAGTGCCCAAAATGC...CAGGCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCATAACTCCATGGATGTaGACTGGTAGAGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPAITPWM*TGRDRT Trigger: AGTCCTGTCTCTACCAGTTCACATCCATGGAGTTAT...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCGGTATAAACTCCTCCTaGTTTCTTTTCTGCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPAGINSS*FLFCGA Trigger: AGCTCCGCAGAAAAGAAAGCAGGAGGAGTTTATACC...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTCGTTAGGTGAGGAGTaGTTCCTGGAAGCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWSLGEE*FLEALG Trigger: ACCCAGAGCTTCCAGGAAGCACTCCTCACCTAACGA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCTGGCTGTCCTGTTGCTaGAAACCTTTAAACCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGFPGTCSVDQGVLELKSWLSCC*KPLNRG Trigger: TCCTCGGTTTAAAGGTTTCCAGCAACAGGACAGCCA...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGGCCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWASFML*RNRNKA Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGGC...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAATGCACTCAGGGCTCTTaGCTCTGGAACCACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCYCLFKGNRSGKSVSHECTQGS*LWNHLH Trigger: GTGCAGGTGGTTCCAGAGTCAAGAGCCCTGAGTGCA...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | TGGCTAAAGGTCTGGACAGTTTACAGCCTCTCTCCCTCACATTTGCCCATAGAAGTTCTTGTCGTTAGGTaGGGAGTGCTTCCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLKVWTVYSLSPSHLPIEVLVVR*GVLPGS Trigger: GCTTCCAGGAAGCACTCCTCACCTAACGACAAGAAC...TTCTATGGGCAAATGTGAGGGAGAGAGGCTGTAAACTGTCCAGACCTTTAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065111.15 |
||
| CDS-3UTR GCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCCAGACTCTCAGCTACTaGTTTCTTCACATGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPAQTLSY*FLHMIH Trigger: GTGAATCATGTGAAGAAAGCAGTAGCTGAGAGTCTG...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCTCCTGCTTTCTTTTCTaGGGAGCTGGTTTCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGFPGTCSVDQGVLELKSSCFLF*GAGFFV Trigger: CACAAAGAAACCAGCTCCGCAGAAAAGAAAGCAGGA...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGCCTGTCCTGCTTTCTTTTCTaGGGAGCTGGTTTCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVCLCLPSAGIKGMHNCLSCFLF*GAGFFV Trigger: CACAAAGAAACCAGCTCCGCAGAAAAGAAAGCAGGA...CAGGCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCAGGCTTTTAGAATGCTaGCTTGTATCCTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPARLLEC*LVSSWS Trigger: AGACCAAGAGGATACAAGCCAGCATTCTAAAAGCCT...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACGCAGCACAGGCTGCTTaGAAGCGATCTCGGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYAAQAA*KRSRAP Trigger: CGGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGC...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTTGCCAGTGGGAGGTGTaGGTGCTGCTCCGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSCQWEV*VLLRVS Trigger: GGACACGCGGAGCAGCACCCACACCTCCCACTGGCA...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCGGCTGTTTTTCCCTGTaGAAATCTCTATTGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPAGCFSL*KSLLPV Trigger: AACTGGCAATAGAGATTTCCACAGGGAAAAACAGCC...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGCTGACATGGACCCAGTaGCCTCCCAATTCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALLTWTQ*PPNSPS Trigger: TGATGGTGAATTGGGAGGCCACTGGGTCCATGTCAG...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGGCTTCCTGGAAGCTCTaGGTTGATGGGCATTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWASWKL*VDGHFL Trigger: TAGGAAATGCCCATCAACCCAGAGCTTCCAGGAAGC...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCGAAGAATCTTCATCATaGGGCAGCAGTGGTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGFPGTCSVDQGVLELKSEESSS*GSSGLL Trigger: TAAAAGACCACTGCTGCCTCATGATGAAGATTCTTC...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGCTGTCCCAGAGCTCTTaGAGTGTCTCAGTGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALLSQSS*SVSVNA Trigger: AGCATTCACTGAGACACTTCAAGAGCTCTGGGACAG...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGGCCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALASFML*RNRNKA Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGGC...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCAGAGCAGCTTATTGTTaGCCATTAATAACTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPARAAYC*PLITPW Trigger: CCATGGAGTTATTAATGGGCAACAATAAGCTGCTCT...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTAAAGGTCTGGACAGTTTACAGCCTCTCTCCCTCACATTTGCCCATAGAAATCAGCAGGCAGTACTaGCTGTCCATCGCAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: WLKVWTVYSLSPSHLPIEISRQY*LSIAES Trigger: AGATTCTGCGATGGACAGCCAGTACTGCCTGCTGAT...TTCTATGGGCAAATGTGAGGGAGAGAGGCTGTAAACTGTCCAGACCTTTAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTGGCTGTCCTGTTGCTaGAAACCTTTAAACCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWWLSCC*KPLNRG Trigger: TCCTCGGTTTAAAGGTTTCCAGCAACAGGACAGCCA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGCAGCACAGGCTGCTTaGAAGCGATCTCGGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSAAQAA*KRSRAP Trigger: CGGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTGCCAGTGGGAGGTGTaGGTGCTGCTCCGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISCQWEV*VLLRVS Trigger: GGACACGCGGAGCAGCACCCACACCTCCCACTGGCA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGCCTGGGCTGTTTTTCCCTGTaGAAATCTCTATTGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVCLCLPSAGIKGMHNCLGCFSL*KSLLPV Trigger: AACTGGCAATAGAGATTTCCACAGGGAAAAACAGCC...CAGGCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGACGGTGCCCTTGTTATaGTCTTGGTCTGTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWTVPLL*SWSVSC Trigger: ACAAGAAACAGACCAAGATCATAACAAGGGCACCGT...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCAAGTGTCTCAGTGAATaGTGGCTTTCTGAGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLEPALWTRVSLNSNPPAKCLSE*WLSEFL Trigger: TAAAAACTCAGAAAGCCAGCATTCACTGAGACACTT...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR GCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGTTGTGGCAATTCACTTaGCAGTGGGAGGTGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AESKGMGHHHSAGFSVLKLWQFT*QWEVWV Trigger: CACCCACACCTCCCACTGGCAAGTGAATTGCCACAA...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR GCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTTCCTCCTCGCCACCATaGGTCTCCTTGGCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSSSSPP*VSLACG Trigger: GCCACAAGCCAAGGAGACGCATGGTGGCGAGGAGGA...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCTATTGCCAGTTACAGTaGCACTCAAATGAAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGFPGTCSVDQGVLELKSYCQLQ*HSNEVQ Trigger: CTGAACTTCATTTGAGTGGCACTGTAACTGGCAATA...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGGGTATAAACTCCTCCTaGTTTCTTTTCTGCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWGINSS*FLFCGA Trigger: AGCTCCGCAGAAAAGAAAGCAGGAGGAGTTTATACC...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTCGCAGGAATCACCCCTaGACCGCAGCAGCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISRRNHP*TAAAQA Trigger: AGCCTGTGCTGCTGCGGTCCAGGGGTGATTCCTGCG...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGGTTGCTTCCTGGCATTaGTATAAACTCCTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWVASWH*YKLLLL Trigger: AAGCAGGAGGAGTTTATACCAATGCCAGGAAGCAAC...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCAAGTGGCCTCCTCTCATaGAGCCGCTGTGCTCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPSGLLS*SRCAPL Trigger: TAGTGGAGCACAGCGGCTCCATGAGAGGAGGCCACT...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | TCTGTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGCCTGTTCTATGATAGGAAGTaGGATATCAATGAAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SVCLCLPSAGIKGMHNCLFYDRK*DINEGI Trigger: GATCCCTTCATTGATATCTCACTTCCTATCATAGAA...CAGGCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGGCATTTTGGGCACTGTaGAGCCTCGTATGTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AESKGMGHHHSAGFSVLKAFWAL*SLVCFP Trigger: GGGAAAACATACGAGGCTTCACAGTGCCCAAAATGC...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGGAGACAGGACTGGACTaGGCATTCTTTAGAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALETGLD*AFFRSS Trigger: ACTACTTCTAAAGAATGCTCAGTCCAGTCCTGTCTC...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGACGGTGCCCTTGTTATaGTCTTGGTCTGTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALTVPLL*SWSVSC Trigger: ACAAGAAACAGACCAAGATCATAACAAGGGCACCGT...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCAAATGTTTTCTGTCATaGCTTAGTTGGTTCTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGFPGTCSVDQGVLELKSKCFLS*LSWFLS Trigger: CGACAAGAACCAACTAAGTCATGACAGAAAACATTT...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTTTCAGCCTCCTTCATaGTGTGAAGAAACAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWFQPPS*CEETGT Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGGCTGAAA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTCCTGCTTTCTTTTCTaGGGAGCTGGTTTCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALSCFLF*GAGFFV Trigger: CACAAAGAAACCAGCTCCGCAGAAAAGAAAGCAGGA...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTGTCTCAGTGAATGCTaGCTTTCTGAGTTTTTACCG | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWCLSEC*LSEFLP Trigger: CGGTAAAAACTCAGAAAGCCAGCATTCACTGAGACA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAACTGATGACAACACAATaGGACTCTGTCCCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCYCLFKGNRSGKSVSHELMTTQ*DSVPEL Trigger: GAGCTCTGGGACAGAGTCCCATTGTGTTGTCATCAG...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGCTGATGACAACACAATaGGACTCTGTCCCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AESKGMGHHHSAGFSVLKLMTTQ*DSVPEL Trigger: GAGCTCTGGGACAGAGTCCCATTGTGTTGTCATCAG...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAATGGCTTGTATCCTCTTaGTCTCCTCTGTCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LCYCLFKGNRSGKSVSHEWLVSS*SPLSSL Trigger: CAGTGAGGACAGAGGAGACCAAGAGGATACAAGCCA...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAACACCATGCGTCTCCTTaGCTTGTGGCAATTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCYCLFKGNRSGKSVSHEHHASP*LVAIHL Trigger: CAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTG...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGGAAGAATCTTCATCATaGGGCAGCAGTGGTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALEESSS*GSSGLL Trigger: TAAAAGACCACTGCTGCCTCATGATGAAGATTCTTC...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCACACATGACTGTGCTAGTTAATTCGCCAATAAAGATGCGATCTATGAAGAAACAGGAACAAGGCTaGCGTCAGTGGTCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSHMTVLVNSPIKMRSMKKQEQG*RQWSWA Trigger: AGCCCAGGACCACTGACGTCAGCCTTGTTCCTGTTT...CTTCATAGATCGCATCTTTATTGGCGAATTAACTAGCACAGTCATGTGTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148647.3 |
||
| CDS-3UTR TCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTGCACTCAGGGCTCTTaGCTCTGGAACCACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISCTQGS*LWNHLH Trigger: GTGCAGGTGGTTCCAGAGTCAAGAGCCCTGAGTGCA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTTTCAGCCTCCTTCATaGTGTGAAGAAACAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VFQARFLCVVLAFLEPALFQPPS*CEETGT Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGGCTGAAA...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGAGAGCAGCTTATTGTTaGCCATTAATAACTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWRAAYC*PLITPW Trigger: CCATGGAGTTATTAATGGGCAACAATAAGCTGCTCT...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCCAAGTTGTCATTCTTTaGGTGTGTAACAACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGFPGTCSVDQGVLELKSQVVIL*VCNNSF Trigger: AAAACTGTTGTTACACACCCAAAGAATGACAACTTG...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGACGAAAGAGAAATCTTaGATTTGGTGCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWTKEKS*IWCHLL Trigger: AAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGT...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTAAACAGGAACAAGGCTaGCGTCAGTGGTCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISKQEQG*RQWSWA Trigger: AGCCCAGGACCACTGACGTCAGCCTTGTTCCTGTTT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | GCTGAATCTAAAGGCATGGGCCACCATCACTCAGCAGGTTTTTCTGTTTTAAAGGAGACAGGACTGGACTaGGCATTCTTTAGAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AESKGMGHHHSAGFSVLKETGLD*AFFRSS Trigger: ACTACTTCTAAAGAATGCTCAGTCCAGTCCTGTCTC...CTTTAAAACAGAAAAACCTGCTGAGTGATGGTGGCCCATGCCTTTAGATTCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTCTGGAAGCTCTGGGTTaGTGGGCATTTCCTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSLEALG*WAFPTV Trigger: GACTGTAGGAAATGCCCATCAACCCAGAGCTTCCAG...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGTTCTTGTCGTTAGGTaGGGAGTGCTTCCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSVLVVR*GVLPGS Trigger: GCTTCCAGGAAGCACTCCTCACCTAACGACAAGAAC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGAAGTGTCTCAGTGAATaGTGGCTTTCTGAGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FQARFLCVVLAFLEPALWKCLSE*WLSEFL Trigger: TAAAAACTCAGAAAGCCAGCATTCACTGAGACACTT...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATTTGTGGCAATTCACTTaGCAGTGGGAGGTGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHLWQFT*QWEVWV Trigger: CACCCACACCTCCCACTGGCAAGTGAATTGCCACAA...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR GCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAAGGTATAAACTCCTCCTaGTTTCTTTTCTGCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCYCLFKGNRSGKSVSHEGINSS*FLFCGA Trigger: AGCTCCGCAGAAAAGAAAGCAGGAGGAGTTTATACC...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCACACCATGCGTCTCCTTaGCTTGTGGCAATTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPHHASP*LVAIHL Trigger: CAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTG...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCAGCTTCCTGGAAGCTCTaGGTTGATGGGCATTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPASWKL*VDGHFL Trigger: TAGGAAATGCCCATCAACCCAGAGCTTCCAGGAAGC...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065111.15 |
||
| 3UTR CAA 72 bp | CGTCTCTTTTCAGTACAGTCCTCACAGAGCAGCTTATaGTTGCCCATTAATAACTCCATGGATGTGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLFSVQSSQSSL*LPINNSMDVNW Trigger: CCAGTTCACATCCATGGAGTTATTAATGGGCAACAATAAGCTGCTCTGTGAGGACTGTACTGAAAAGAGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTCTGTCCCAGAGCTCTTaGAGTGTCTCAGTGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSLSQSS*SVSVNA Trigger: AGCATTCACTGAGACACTTCAAGAGCTCTGGGACAG...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCACACATGACTGTGCTAGTTAATTCGCCAATAAAGATGCGATCTATGAAGGCCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSHMTVLVNSPIKMRSMKASFML*RNRNKA Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGGC...CTTCATAGATCGCATCTTTATTGGCGAATTAACTAGCACAGTCATGTGTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148647.3 |
||
| CDS-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGCATTTTGGGCACTGTaGAGCCTCGTATGTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSAFWAL*SLVCFP Trigger: GGGAAAACATACGAGGCTTCACAGTGCCCAAAATGC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCATTTTTACCGCATCCCTaGAAACCACACTTGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPFLPHP*KPHLRH Trigger: GTGCCTCAAGTGTGGTTTGCAGGGATGCGGTAAAAA...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| CDS-3UTR GCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTTGTGGCAATTCACTTaGCAGTGGGAGGTGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISLWQFT*QWEVWV Trigger: CACCCACACCTCCCACTGGCAAGTGAATTGCCACAA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTATCAGCAGGCAGTACTaGCTGTCCATCGCAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSISRQY*LSIAES Trigger: AGATTCTGCGATGGACAGCCAGTACTGCCTGCTGAT...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR GCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTTTTTTACCGCATCCCTaGAAACCACACTTGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSFLPHP*KPHLRH Trigger: GTGCCTCAAGTGTGGTTTGCAGGGATGCGGTAAAAA...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTATCAGCAGGCAGTACTaGCTGTCCATCGCAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISISRQY*LSIAES Trigger: AGATTCTGCGATGGACAGCCAGTACTGCCTGCTGAT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTCTGATGACAACACAATaGGACTCTGTCCCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISLMTTQ*DSVPEL Trigger: GAGCTCTGGGACAGAGTCCCATTGTGTTGTCATCAG...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTGGCTTGTATCCTCTTaGTCTCCTCTGTCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISWLVSS*SPLSSL Trigger: CAGTGAGGACAGAGGAGACCAAGAGGATACAAGCCA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTCACCATGCGTCTCCTTaGCTTGTGGCAATTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISHHASP*LVAIHL Trigger: CAAGTGAATTGCCACAAGCCAAGGAGACGCATGGTG...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCAGTTGCTTCCTGGCATTaGTATAAACTCCTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPVASWH*YKLLLL Trigger: AAGCAGGAGGAGTTTATACCAATGCCAGGAAGCAAC...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAAACGAAAGAGAAATCTTaGATTTGGTGCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCYCLFKGNRSGKSVSHETKEKS*IWCHLL Trigger: AAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGT...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGAGACAGGACTGGACTaGGCATTCTTTAGAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSETGLD*AFFRSS Trigger: ACTACTTCTAAAGAATGCTCAGTCCAGTCCTGTCTC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTATAACTCCATGGATGTaGACTGGTAGAGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSITPWM*TGRDRT Trigger: AGTCCTGTCTCTACCAGTTCACATCCATGGAGTTAT...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | GTAGAGATGTTCGCACATTCTTCACACATGACTGTGCTAGTTAATTCGCCAATATTTCAGCCTCCTTCATaGTGTGAAGAAACAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VEMFAHSSHMTVLVNSPIFQPPS*CEETGT Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGGCTGAAA...TATTGGCGAATTAACTAGCACAGTCATGTGTGAAGAATGTGCGAACATCTCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148647.3 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTGGCTGTCCTGTTGCTaGAAACCTTTAAACCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISWLSCC*KPLNRG Trigger: TCCTCGGTTTAAAGGTTTCCAGCAACAGGACAGCCA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATGTTGCTTCCTGGCATTaGTATAAACTCCTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHVASWH*YKLLLL Trigger: AAGCAGGAGGAGTTTATACCAATGCCAGGAAGCAAC...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR TCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTATAACTCCATGGATGTaGACTGGTAGAGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISITPWM*TGRDRT Trigger: AGTCCTGTCTCTACCAGTTCACATCCATGGAGTTAT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATCAGACTCTCAGCTACTaGTTTCTTCACATGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHQTLSY*FLHMIH Trigger: GTGAATCATGTGAAGAAAGCAGTAGCTGAGAGTCTG...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| CDS-3UTR GCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTCAGACTCTCAGCTACTaGTTTCTTCACATGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSQTLSY*FLHMIH Trigger: GTGAATCATGTGAAGAAAGCAGTAGCTGAGAGTCTG...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR GCA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCATATTGCCAGTTACAGTaGCACTCAAATGAAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPYCQLQ*HSNEVQ Trigger: CTGAACTTCATTTGAGTGGCACTGTAACTGGCAATA...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR GCA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACAGAGCAGCTTATTGTTaGCCATTAATAACTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYRAAYC*PLITPW Trigger: CCATGGAGTTATTAATGGGCAACAATAAGCTGCTCT...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR GCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTTCCTACAGTCACGGTaGCCTTGTTATGATCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISFLQSR*PCYDLG Trigger: ACCAAGATCATAACAAGGGCACCGTGACTGTAGGAA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGGCTGTTTTTCCCTGTaGAAATCTCTATTGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSGCFSL*KSLLPV Trigger: AACTGGCAATAGAGATTTCCACAGGGAAAAACAGCC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTGAAGAATCTTCATCATaGGGCAGCAGTGGTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISEESSS*GSSGLL Trigger: TAAAAGACCACTGCTGCCTCATGATGAAGATTCTTC...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACACGAAAGAGAAATCTTaGATTTGGTGCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYTKEKS*IWCHLL Trigger: AAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGT...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | GTAGAGATGTTCGCACATTCTTCACACATGACTGTGCTAGTTAATTCGCCAATAACGAAAGAGAAATCTTaGATTTGGTGCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VEMFAHSSHMTVLVNSPITKEKS*IWCHLL Trigger: AAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGT...TATTGGCGAATTAACTAGCACAGTCATGTGTGAAGAATGTGCGAACATCTCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148647.3 |
||
| CDS-3UTR GCA 90 bp | TCACGGTGCCCTTGTTATGATCTTGGTCTGTTTCTTGTAAACTTCTGCATTTACAAGTGTCTCAGTGAATaGTGGCTTTCTGAGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SRCPCYDLGLFLVNFCIYKCLSE*WLSEFL Trigger: TAAAAACTCAGAAAGCCAGCATTCACTGAGACACTT...GTAAATGCAGAAGTTTACAAGAAACAGACCAAGATCATAACAAGGGCACCGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
||
| CDS-3UTR GCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTTTCAGCCTCCTTCATaGTGTGAAGAAACAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISFQPPS*CEETGT Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGGCTGAAA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTGTCTCAGTGAATGCTaGCTTTCTGAGTTTTTACCG | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISCLSEC*LSEFLP Trigger: CGGTAAAAACTCAGAAAGCCAGCATTCACTGAGACA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTAGGCTTTTAGAATGCTaGCTTGTATCCTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISRLLEC*LVSSWS Trigger: AGACCAAGAGGATACAAGCCAGCATTCTAAAAGCCT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTACGAAAGAGAAATCTTaGATTTGGTGCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSTKEKS*IWCHLL Trigger: AAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGT...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTAAATGTTTTCTGTCATaGCTTAGTTGGTTCTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KIALLIYDHPLDHLHKQSKCFLS*LSWFLS Trigger: CGACAAGAACCAACTAAGTCATGACAGAAAACATTT...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTATTGCCAGTTACAGTaGCACTCAAATGAAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISYCQLQ*HSNEVQ Trigger: CTGAACTTCATTTGAGTGGCACTGTAACTGGCAATA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR TCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTTCTATGATAGGAAGTaGGATATCAATGAAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISFYDRK*DINEGI Trigger: GATCCCTTCATTGATATCTCACTTCCTATCATAGAA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR GCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTAAGTGTCTCAGTGAATaGTGGCTTTCTGAGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISKCLSE*WLSEFL Trigger: TAAAAACTCAGAAAGCCAGCATTCACTGAGACACTT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTCAAGTTGTCATTCTTTaGGTGTGTAACAACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GDISQLHFTKTFHIFRISQVVIL*VCNNSF Trigger: AAAACTGTTGTTACACACCCAAAGAATGACAACTTG...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCCTCCTGGCTGTCCTGTaGCTGGAAACCTTTAAACCG | + |
|
Preference number: 5 (lower is better) Translates to: FLEPALWTRVSLNSNPPALLAVL*LETFKP Trigger: CGGTTTAAAGGTTTCCAGCAACAGGACAGCCAGGAG...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGAGCAGCACAGGCTGCTaGGAAGCGATCTCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VFQARFLCVVLAFLEPALSSTGC*EAISGS Trigger: GGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGCT...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCCTGGCTTGTATCCTCTaGGTCTCCTCTGTCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LGFPGTCSVDQGVLELKSLACIL*VSSVLT Trigger: AGTGAGGACAGAGGAGACCAAGAGGATACAAGCCAG...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGCCTGGGGCTGGCTTCCAAGTaGTCATTCTTTGGGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SVCLCLPSAGIKGMHNCLGLASK*SFFGCV Trigger: TACACACCCAAAGAATGACAACTTGGAAGCCAGCCC...CAGGCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCGGTCTGAAAAGCATTTaGGGCACTGTGAAGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LGFPGTCSVDQGVLELKSGLKSI*GTVKPR Trigger: ACGAGGCTTCACAGTGCCCAAAATGCTTTTCAGACC...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGGTGCACTCAGGGCTCTaGACTCTGGAACCACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VFQARFLCVVLAFLEPALVHSGL*TLEPPA Trigger: TGCAGGTGGTTCCAGAGTCAAGAGCCCTGAGTGCAC...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGCTCCTGGCTGTCCTGTaGCTGGAAACCTTTAAACCG | + |
|
Preference number: 5 (lower is better) Translates to: FQARFLCVVLAFLEPALWLLAVL*LETFKP Trigger: CGGTTTAAAGGTTTCCAGCAACAGGACAGCCAGGAG...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCACCTGCCTCATCATCAGCAGTCTaGGTAGTTGGGTTGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLEPALWTRVSLNSNPPASSSAV*VVGLLK Trigger: CTTCAACAACCCAACTACCAAGACTGCTGATGATGA...GGCAGGTGGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS CCA 90 bp | CAATGGGACTCTGTCCCAGAGCTCTTGAAGTGTCTCAGTGAATGCTaGCTTTCTGAGTTTTTACCGCATCCCTGCAAACCACACTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QWDSVPELLKCLSEC*LSEFLPHPCKPHLR Trigger: CCTCAAGTGTGGTTTGCAGGGATGCGGTAAAAACTCAGAAAGCCAGCATTCACTGAGACACTTCAAGAGCTCTGGGACAGAGTCCCATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 ENSMUST00000148304.8 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGTGGTCTGTCCCAGAGCTCTaGAAGTGTCTCAGTGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: FQARFLCVVLAFLEPALWSVPEL*KCLSEC Trigger: GCATTCACTGAGACACTTCAAGAGCTCTGGGACAGA...CCACAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
||
| CDS GCA 90 bp | ACACAATGGGACTCTGTCCCAGAGCTCTTGAAGTGTCTCAGTGAATaGTGGCTTTCTGAGTTTTTACCGCATCCCTGCAAACCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TQWDSVPELLKCLSE*WLSEFLPHPCKPHL Trigger: CAAGTGTGGTTTGCAGGGATGCGGTAAAAACTCAGAAAGCCAGCATTCACTGAGACACTTCAAGAGCTCTGGGACAGAGTCCCATTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 ENSMUST00000148304.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTAAAGGTCTGGACAGTTTACAGCCTCTCTCCCTCACATTTGCCCATAGAATCTGTCCCAGAGCTCTaGAAGTGTCTCAGTGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: WLKVWTVYSLSPSHLPIESVPEL*KCLSEC Trigger: GCATTCACTGAGACACTTCAAGAGCTCTGGGACAGA...TTCTATGGGCAAATGTGAGGGAGAGAGGCTGTAAACTGTCCAGACCTTTAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAACTTGTGGCAATTCACTaGCCAGTGGGAGGTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LCYCLFKGNRSGKSVSHELVAIH*PVGGVG Trigger: ACCCACACCTCCCACTGGCAAGTGAATTGCCACAAG...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CAA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGGGTCTGAAAAGCATTTaGGGCACTGTGAAGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VFQARFLCVVLAFLEPALGLKSI*GTVKPR Trigger: ACGAGGCTTCACAGTGCCCAAAATGCTTTTCAGACC...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGCACAACTGCCTGCAGAGCAGCTTATTGTaGCCCATTAATAACTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SVCLCLPSAGIKGMHNCLQSSLL*PINNSM Trigger: CATGGAGTTATTAATGGGCAACAATAAGCTGCTCTG...CAGGCAGTTGTGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTTTCCTGGAACCTGCTCTGTGGACCAGGGTGTCCTTGAACTCAAATCCTCACAGAGCAGCTTATaGTTGCCCATTAATAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGFPGTCSVDQGVLELKSSQSSL*LPINNS Trigger: GGAGTTATTAATGGGCAACAATAAGCTGCTCTGTGA...GGATTTGAGTTCAAGGACACCCTGGTCCACAGAGCAGGTTCCAGGAAAGCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAACTGGCTTGTATCCTCTaGGTCTCCTCTGTCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LCYCLFKGNRSGKSVSHELACIL*VSSVLT Trigger: AGTGAGGACAGAGGAGACCAAGAGGATACAAGCCAG...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CAA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTAGCAGCACAGGCTGCTaGGAAGCGATCTCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDISQLHFTKTFHIFRISSSTGC*EAISGS Trigger: GGAGCCCGAGATCGCTTCCAAGCAGCCTGTGCTGCT...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACGTGCACTCAGGGCTCTaGACTCTGGAACCACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYVHSGL*TLEPPA Trigger: TGCAGGTGGTTCCAGAGTCAAGAGCCCTGAGTGCAC...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CAA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGTGCACTCAGGGCTCTaGACTCTGGAACCACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KIALLIYDHPLDHLHKQSVHSGL*TLEPPA Trigger: TGCAGGTGGTTCCAGAGTCAAGAGCCCTGAGTGCAC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCACTCCTGGCTGTCCTGTaGCTGGAAACCTTTAAACCG | + |
|
Preference number: 5 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPLLAVL*LETFKP Trigger: CGGTTTAAAGGTTTCCAGCAACAGGACAGCCAGGAG...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CAA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACCTGGCTTGTATCCTCTaGGTCTCCTCTGTCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYLACIL*VSSVLT Trigger: AGTGAGGACAGAGGAGACCAAGAGGATACAAGCCAG...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CAA 90 bp | GTTTTTCAGGCAAGGTTTCTCTGTGTTGTCTTGGCTTTCCTGGAACCTGCTCTGGTCTTGGTAGTTGGGTaGTTGAAGGCTTTTAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: VFQARFLCVVLAFLEPALVLVVG*LKAFRM Trigger: CATTCTAAAAGCCTTCAACAACCCAACTACCAAGAC...CAGAGCAGGTTCCAGGAAAGCCAAGACAACACAGAGAAACCTTGCCTGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
||
| CDS-3UTR CAA 90 bp | TGGCTAAAGGTCTGGACAGTTTACAGCCTCTCTCCCTCACATTTGCCCATAGAATCACAGAGCAGCTTATaGTTGCCCATTAATAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLKVWTVYSLSPSHLPIESQSSL*LPINNS Trigger: GGAGTTATTAATGGGCAACAATAAGCTGCTCTGTGA...TTCTATGGGCAAATGTGAGGGAGAGAGGCTGTAAACTGTCCAGACCTTTAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CAA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCATCTGTCCCAGAGCTCTaGAAGTGTCTCAGTGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPSVPEL*KCLSEC Trigger: GCATTCACTGAGACACTTCAAGAGCTCTGGGACAGA...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCAGGGCTGGCTTCCAAGTaGTCATTCTTTGGGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPGLASK*SFFGCV Trigger: TACACACCCAAAGAATGACAACTTGGAAGCCAGCCC...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
||
| CDS-3UTR CAA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTCTTGTGGCAATTCACTaGCCAGTGGGAGGTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GDISQLHFTKTFHIFRISLVAIH*PVGGVG Trigger: ACCCACACCTCCCACTGGCAAGTGAATTGCCACAAG...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
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| CDS-3UTR CAA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACACCTGGAAGCTCTGGGTaGATGGGCATTTCCTACAGT | + |
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Preference number: 5 (lower is better) Translates to: FLHNLKMSPLDNQFHPATPGSSG*MGISYS Trigger: ACTGTAGGAAATGCCCATCAACCCAGAGCTTCCAGG...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065111.15 |
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| CDS-3UTR CAA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTCCTGGAAGCTCTGGGTaGATGGGCATTTCCTACAGT | + |
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Preference number: 5 (lower is better) Translates to: KIALLIYDHPLDHLHKQSPGSSG*MGISYS Trigger: ACTGTAGGAAATGCCCATCAACCCAGAGCTTCCAGG...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065111.15 ENSMUST00000108232.9 |
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| CDS TCA 90 bp | CCACCACTAACGGCTCCAGCTGTGGAGCTGACGAAAGAGAAATCTTaGATTTGGTGCCATCTTCTTTTATCTCGTTCATCAGTTCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: PPLTAPAVELTKEKS*IWCHLLLSRSSVQK Trigger: TTTTTGAACTGATGAACGAGATAAAAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGTCAGCTCCACAGCTGGAGCCGTTAGTGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000148304.8 ENSMUST00000148647.3 |
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| CDS-3UTR CAA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTTCTGTCCCAGAGCTCTaGAAGTGTCTCAGTGAATGC | + |
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Preference number: 5 (lower is better) Translates to: KIALLIYDHPLDHLHKQSSVPEL*KCLSEC Trigger: GCATTCACTGAGACACTTCAAGAGCTCTGGGACAGA...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 |
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| CDS-3UTR CAA 90 bp | AAAATAGCTCTGTTGATATATGATCATCCCCTTGACCACCTACATAAGCAGTCTGGGCTGGCTTCCAAGTaGTCATTCTTTGGGTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: KIALLIYDHPLDHLHKQSGLASK*SFFGCV Trigger: TACACACCCAAAGAATGACAACTTGGAAGCCAGCCC...AGACTGCTTATGTAGGTGGTCAAGGGGATGATCATATATCAACAGAGCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
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| CDS-3UTR CAA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACAGGTCTGAAAAGCATTTaGGGCACTGTGAAGCCTCGT | + |
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Preference number: 5 (lower is better) Translates to: FLHNLKMSPLDNQFHPATGLKSI*GTVKPR Trigger: ACGAGGCTTCACAGTGCCCAAAATGCTTTTCAGACC...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
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| CDS-3UTR CAA 90 bp | CTGTGTTACTGCTTATTTAAGGGGAACAGAAGTGGCAAGTCTGTGTCCCATGAATCACAGAGCAGCTTATaGTTGCCCATTAATAACTCC | + |
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Preference number: 5 (lower is better) Translates to: LCYCLFKGNRSGKSVSHESQSSL*LPINNS Trigger: GGAGTTATTAATGGGCAACAATAAGCTGCTCTGTGA...TTCATGGGACACAGACTTGCCACTTCTGTTCCCCTTAAATAAGCAGTAACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
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| CDS-3UTR CAA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACTCATCATCAGCAGTCTaGGTAGTTGGGTTGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYSSSAV*VVGLLK Trigger: CTTCAACAACCCAACTACCAAGACTGCTGATGATGA...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
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| CDS-3UTR CAA 90 bp | TATGTTACACATGTTAAGAAGGTTCCATCCTGGCTAAAGGTCTGGACAGTTTACTTGGTAGTTGGGTTGTaGAAGGCTTTTAGAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: YVTHVKKVPSWLKVWTVYLVVGL*KAFRML Trigger: CAGCATTCTAAAAGCCTTCAACAACCCAACTACCAA...GTAAACTGTCCAGACCTTTAGCCAGGATGGAACCTTCTTAACATGTGTAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
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| CDS-3UTR CAA 90 bp | GGCACTAGTTCAGACTGTTCTAGAAACTTTTCCTATAGACTAACACACACACCAGTCTTGGTAGTTGGGTaGTTGAAGGCTTTTAGAATG | + |
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Preference number: 5 (lower is better) Translates to: GTSSDCSRNFSYRLTHTPVLVVG*LKAFRM Trigger: CATTCTAAAAGCCTTCAACAACCCAACTACCAAGAC...TGGTGTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
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| CDS-3UTR CAA 90 bp | TTTCTCCACAATCTTAAAATGTCTCCATTAGACAATCAGTTTCACCCAGCCACAAAGTTTGTAATTCCTTaGACAGATGGCACAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: FLHNLKMSPLDNQFHPATKFVIP*TDGTVQ Trigger: CTGCACTGTGCCATCTGTCAAAGGAATTACAAACTT...TGTGGCTGGGTGAAACTGATTGTCTAATGGAGACATTTTAAGATTGTGGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000137293.8 |
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| CDS-3UTR CAA 90 bp | ATATCAAGAGGCAACACTGGGGACTTTATGTTACACATGTTAAGAAGGTTCCATGTCTTGGTAGTTGGGTaGTTGAAGGCTTTTAGAATG | + |
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Preference number: 5 (lower is better) Translates to: ISRGNTGDFMLHMLRRFHVLVVG*LKAFRM Trigger: CATTCTAAAAGCCTTCAACAACCCAACTACCAAGAC...ATGGAACCTTCTTAACATGTGTAACATAAAGTCCCCAGTGTTGCCTCTTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 |
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| CDS-3UTR CAA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTTTGGTAGTTGGGTTGTaGAAGGCTTTTAGAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: GDISQLHFTKTFHIFRISLVVGL*KAFRML Trigger: CAGCATTCTAAAAGCCTTCAACAACCCAACTACCAA...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
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| CDS-3UTR CAA 90 bp | GGTGACATTTCACAGCTACATTTCACGAAGACATTTCATATCTTCAGGATATCTCAGAGCAGCTTATTGTaGCCCATTAATAACTCCATG | + |
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Preference number: 5 (lower is better) Translates to: GDISQLHFTKTFHIFRISQSSLL*PINNSM Trigger: CATGGAGTTATTAATGGGCAACAATAAGCTGCTCTG...AGATATCCTGAAGATATGAAATGTCTTCGTGAAATGTAGCTGTGAAATGTCACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
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| CDS TCA 72 bp | AGCCTCCTTCATGCTGTGAAGAAACAGGAACAAGGCTaGCGTCAGTGGTCCTGGGCTCGAGAGTTCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: SLLHAVKKQEQG*RQWSWAREFHH Trigger: GTGGTGGAACTCTCGAGCCCAGGACCACTGACGTCAGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000148647.3 |
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| CDS GCA 72 bp | GCTGGCTTGTATCCTCTTGGTCTCCTCTGTCCTCACTaGATCCAACAGATGGTGCAGAAGCTCCTGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AGLYPLGLLCPH*IQQMVQKLLAV Trigger: GACAGCCAGGAGCTTCTGCACCATCTGTTGGATGCAGTGAGGACAGAGGAGACCAAGAGGATACAAGCCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 |
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| CDS TCA 72 bp | TTTCTGAGTTTTTACCGCATCCCTGCAAACCACACTTaGGGCACAACCAAACATCAGCAGGCAGTACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: FLSFYRIPANHT*GTTKHQQAVLA Trigger: AGCCAGTACTGCCTGCTGATGTTTGGTTGTGCCTCAAGTGTGGTTTGCAGGGATGCGGTAAAAACTCAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 ENSMUST00000148304.8 |
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| CDS GCA 72 bp | GACTCTGTCCCAGAGCTCTTGAAGTGTCTCAGTGAATaGTGGCTTTCTGAGTTTTTACCGCATCCCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: DSVPELLKCLSE*WLSEFLPHPCK Trigger: TTTGCAGGGATGCGGTAAAAACTCAGAAAGCCAGCATTCACTGAGACACTTCAAGAGCTCTGGGACAGAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 ENSMUST00000148304.8 |
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| CDS CAA 90 bp | GTACTCAGGCTGATGACAACACAATGGGACTCTGTCCCAGAGCTCTaGAAGTGTCTCAGTGAATGCTGGCTTTCTGAGTTTTTACCGCAT | + |
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Preference number: 6 (lower is better) Translates to: VLRLMTTQWDSVPEL*KCLSECWLSEFLPH Trigger: ATGCGGTAAAAACTCAGAAAGCCAGCATTCACTGAGACACTTCAAGAGCTCTGGGACAGAGTCCCATTGTGTTGTCATCAGCCTGAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 ENSMUST00000148304.8 |
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| CDS CAA 72 bp | CTGATGACAACACAATGGGACTCTGTCCCAGAGCTCTaGAAGTGTCTCAGTGAATGCTGGCTTTCTGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LMTTQWDSVPEL*KCLSECWLSEF Trigger: AAACTCAGAAAGCCAGCATTCACTGAGACACTTCAAGAGCTCTGGGACAGAGTCCCATTGTGTTGTCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000137293.8 ENSMUST00000148304.8 |
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| CDS TCA 72 bp | AGGAGCCCAGCTGTGGAGCTGACGAAAGAGAAATCTTaGATTTGGTGCCATCTTCTTTTATCTCGTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: RSPAVELTKEKS*IWCHLLLSRSS Trigger: TGATGAACGAGATAAAAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGTCAGCTCCACAGCTGGGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| CDS CAA 90 bp | TCCACCACTAACGGCTCCAGCTGTGGAGCTGACGAAAGAGAAATCTaGAATTTGGTGCCATCTTCTTTTATCTCGTTCATCAGTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: STTNGSSCGADEREI*NLVPSSFISFISSK Trigger: TTTTGAACTGATGAACGAGATAAAAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGTCAGCTCCACAGCTGGAGCCGTTAGTGGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000148304.8 ENSMUST00000148647.3 |
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| CDS CAA 72 bp | CCCAGCTGTGGAGCTGACGAAAGAGAAATCTTGAATTaGGTGCCATCTTCTTTTATCTCGTTCATCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSCGADEREILN*VPSSFISFISS Trigger: TGAACTGATGAACGAGATAAAAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGTCAGCTCCACAGCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137293.8 |
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| CDS CAA 72 bp | TCCAGCTGTGGAGCTGACGAAAGAGAAATCTTGAATTaGGTGCCATCTTCTTTTATCTCGTTCATCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSCGADEREILN*VPSSFISFISS Trigger: TGAACTGATGAACGAGATAAAAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGTCAGCTCCACAGCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000148304.8 ENSMUST00000148647.3 |
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| CDS CAA 90 bp | ACTAACGGCTCCAGCTGTGGAGCTGACGAAAGAGAAATCTTGAATTaGGTGCCATCTTCTTTTATCTCGTTCATCAGTTCAAAAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: TNGSSCGADEREILN*VPSSFISFISSKRM Trigger: CATTCTTTTTGAACTGATGAACGAGATAAAAGAAGATGGCACCAAATTCAAGATTTCTCTTTCGTCAGCTCCACAGCTGGAGCCGTTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040429.12 ENSMUST00000065111.15 ENSMUST00000108232.9 ENSMUST00000148304.8 ENSMUST00000148647.3 |
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| CDS TCA 72 bp | TCTTCAGATGGCCATTTTCTTAAATGTTTTCTGTCATaGCTTAGTTGGTTCCTTTCTTCTATGATAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSDGHFLKCFLS*LSWFLSSMIGS Trigger: ACTTCCTATCATAGAAGAAAGGAACCAACTAAGTCATGACAGAAAACATTTAAGAAAATGGCCATCTGAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040429.12 |
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