Pregenerated sensors for USP44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020020Ensembl transcript IDs: ENSMUST00000216224.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCATGTTCCGACCTTTTaGGGCCCCTCCGCTCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDHVPTF*GPSAQA Trigger: GGCCTGAGCGGAGGGGCCTCAAAAGGTCGGAACATG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATGGCTTTGTCCTTTGCTaGGGATGCGGGAGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDGFVLC*GCGRWG Trigger: CCCCCACCTCCCGCATCCCCAGCAAAGGACAAAGCC...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTGGATGGCTGCTTTCTTaGAAGTGCTTCAGTGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: RRSAHLKRIYTDNESPLSGWLLS*KCFSAC Trigger: GCACGCACTGAAGCACTTTCAAGAAAGCAGCCATCC...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAAGCATGGCAAACGGTaGGACCAAGGCCCACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDKHGKR*DQGPLS Trigger: GGAGAGTGGGCCTTGGTCTCACCGTTTGCCATGCTT...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATGAAAGCACTCTGGTCTaGGAGCGTTCAGGGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDESTLV*ERSGSP Trigger: GGGAGACCCTGAACGCTCTCAGACCAGAGTGCTTTC...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATTGCTGCTCCAACTCCTaGTGCTGCCTTCTCTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDCCSNS*CCLLFA Trigger: GGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCA...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTTCAGCTTGGAATCGTTaGAGTGGACCCAGAACCCTC | + |
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Preference number: 4 (lower is better) Translates to: RRSAHLKRIYTDNESPLSSAWNR*SGPRTL Trigger: GAGGGTTCTGGGTCCACTGCAACGATTCCAAGCTGA...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTACACGGAGTGAAGCATaGCAAACGGTGAGACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRSAHLKRIYTDNESPLSTRSEA*QTVRPR Trigger: CCTTGGTCTCACCGTTTGCCATGCTTCACTCCGTGT...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTTGCACATGCTCAGCTTaGAATCGTTGCAGTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: RRSAHLKRIYTDNESPLSCTCSA*NRCSGP Trigger: GGGTCCACTGCAACGATTCCAAGCTGAGCATGTGCA...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATTGCTCCAACTCCTGCTaGTGCCTTCTCTTCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDCSNSC*CLLFAS Trigger: AGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCA...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATCGACGTGGGAACAGCTaGGGCAAGCCCAAATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYRRGNS*GKPKWT Trigger: AGTCCATTTGGGCTTGCCTCAGCTGTTCCCACGTCG...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATTTTGGGAAGTGGGGATaGGGGCTGGTAACTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDFGKWG*GLVTWF Trigger: GAACCAAGTTACCAGCCCTCATCCCCACTTCCCAAA...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCGGGCAGAGATTGGGTaGCGTCGAGTAAGGAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDRAEIG*RRVRSK Trigger: TTTACTCCTTACTCGACGGCACCCAATCTCTGCCCG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTCAGCATCTTTCCCACTaGACTGGTATCTCTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RRSAHLKRIYTDNESPLSQHLSH*TGISLE Trigger: TTCCAGAGAGATACCAGTGCAGTGGGAAAGATGCTG...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCGTTCAGGGTCTCCCTaGAGCAATAAGGCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDRSGSP*SNKAPC Trigger: ACATGGAGCCTTATTGCTGCAGGGAGACCCTGAACG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATTTGGAATCGTTGCAGTaGACCCAGAACCCTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDLESLQ*TQNPPS Trigger: CGAAGGAGGGTTCTGGGTCCACTGCAACGATTCCAA...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAAGATGGAATGGCCTTaGGCAAGCTGCAACTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDKMEWP*ASCNCS Trigger: TGAGCAGTTGCAGCTTGCTCAAGGCCATTCCATCTT...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATTCGGCTTTCATCTGCTaGTCCAACTCCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYSAFIC*SNSCCC Trigger: GCAGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGA...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCTTCCATCGTGCACATaGTCAGCTTGGAATCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDLPSCT*SAWNRC Trigger: GCAACGATTCCAAGCTGAGCATGTGCACGATGGAAG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCATTCTCTCCTGAGTTaGCTCTTGCCCTTTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDHSLLS*LLPFPS Trigger: GGAAGGAAAGGGCAAGAGCCAACTCAGGAGAGAATG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATGCTACCATTCTCTCCTaGGTTGGCTCTTGCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYATILS*VGSCPF Trigger: GAAAGGGCAAGAGCCAACTCAGGAGAGAATGGTAGC...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTTGGCATATCATAAGCTaGTTCTGGGCTTCTGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: RRSAHLKRIYTDNESPLSWHIIS*FWASVN Trigger: ATTCACAGAAGCCCAGAAGCAGCTTATGATATGCCA...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATTTCAGTGCGTGCTCTTaGATGTACTTCCCACAGGCG | + |
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Preference number: 4 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYFSACS*MYFPQA Trigger: CGCCTGTGGGAAGTACATCCAAGAGCACGCACTGAA...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCCATGGGCCTTCGTTTaGTTAAGGAGTCACTTACTT | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDPWAFV*LRSHLL Trigger: AAGTAAGTGACTCCTTAATCAAACGAAGGCCCATGG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATTGCAGTCTGAGAACCTaGGGTAGATGGCATATCATA | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDCSLRT*GRWHII Trigger: TATGATATGCCATCTACCTCAGGTTCTCAGACTGCA...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCCTTTCTCTTTCTCTTaGCCTTCGTTCATCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDPFSFS*PSFICC Trigger: ACAGCAGATGAACGAAGGGCAAGAGAAAGAGAAAGG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTACTTGGAACAGGATATaGAATTCATGGCAGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: RRSAHLKRIYTDNESPLSTWNRI*NSWQRE Trigger: TTCTCTCTGCCATGAATTGCATATCCTGTTCCAAGT...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATTCTGAGGGTCCAAGATaGAATGGCCTTGAGCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYSEGPR*NGLEQA Trigger: AGCTTGCTCAAGGCCATTCCATCTTGGACCCTCAGA...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAGGATATGCAATTCATaGCAGAGAGAACTGTACGGG | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDRICNS*QRELYG Trigger: CCCGTACAGTTCTCTCTGCCATGAATTGCATATCCT...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTCCCAGAAGGATTCTATaGTATCTGATTTGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: RRSAHLKRIYTDNESPLSPRRIL*YLICCH Trigger: GTGACAACAAATCAGATACCATAGAATCCTTCTGGG...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATGCACTGGTATCTCTCTaGAAACTCCAGGGACAAGTC | + |
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Preference number: 4 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYALVSL*KLQGQV Trigger: GACTTGTCCCTGGAGTTTCCAGAGAGATACCAGTGC...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTATCATAAGCTGCTTCTaGGCTTCTGTGAATACAACT | + |
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Preference number: 4 (lower is better) Translates to: RRSAHLKRIYTDNESPLSIISCF*ASVNTT Trigger: AGTTGTATTCACAGAAGCCCAGAAGCAGCTTATGAT...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCCAGACCACATGACTTaGAACAGGATATGCAATTCA | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDPDHMT*NRICNS Trigger: TGAATTGCATATCCTGTTCCAAGTCATGTGGTCTGG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CCA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATTCAATAAGTCTCCTTTaGGAAGTGGGGATGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYSISLL*EVGMRA Trigger: AGCCCTCATCCCCACTTCCCAAAGGAGACTTATTGA...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR TCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATGGATTCTATGGTATCTaGTTTGTTGTCACAAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDGFYGI*FVVTSK Trigger: CTTGCTTGTGACAACAAATCAGATACCATAGAATCC...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATTGGACTCGGTTGTGTTaGAGACCATACAGTACCATT | + |
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Preference number: 4 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYWTRLC*RPYSTI Trigger: AATGGTACTGTATGGTCTGCAACACAACCGAGTCCA...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATACCACATTCAGAACTTaGTCAATAAGTCTCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDTTFRT*SISLLW Trigger: CCAAAGGAGACTTATTGAGCAAGTTCTGAATGTGGT...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR GCA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATTTGAAAGTGCTTCAGTaGGTGCTCTTGGATGTACTT | + |
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Preference number: 4 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYLKVLQ*VLLDVL Trigger: AAGTACATCCAAGAGCACGCACTGAAGCACTTTCAA...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 90 bp | CTCTTGCCCTTCGTTCATCTGCTGTGCCGCCGCCTCCGTGACGGCTaGGTGCTTATAGGATCGGGCCTTATCGCTGGCAGCCACAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLPFVHLLCRRLRDG*VLIGSGLIAGSHSQ Trigger: CTGGCTGTGGCTGCCAGCGATAAGGCCCGATCCTATAAGCACTCAGCCGTCACGGAGGCGGCGGCACAGCAGATGAACGAAGGGCAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 90 bp | CCTCCTCCGAGGAGCCTTGTAAGCGTAAACTCTTCCGCGGAGGTGTaGTTTCCAGCTCGGCTTTCATCTGCTGCTCCAACTCCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PPPRSLVSVNSSAEV*FPARLSSAAPTPAA Trigger: AGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGAGCTGGAAAGCACACCTCCGCGGAAGAGTTTACGCTTACAAGGCTCCTCGGAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 90 bp | TTCCAATTGCTGACTGTTCGAACCAAGTTCGAAAGGCTTTCCCCATaGGCACCCGTCTCCTGTGCCAGAGGGCGGCGCACGTTGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: FQLLTVRTKFERLSP*APVSCARGRRTLDP Trigger: AGGATCCAACGTGCGCCGCCCTCTGGCACAGGAGACGGGTGCTCATGGGGAAAGCCTTTCGAACTTGGTTCGAACAGTCAGCAATTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 90 bp | GTGCGTGCTCTTGGATGTACTTCCCACAGGCGACGTGGGAACAGCTaGGGCAAGCCCAAATGGACTCGGTTGTGTTGCAGACCATACAGT | + |
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Preference number: 5 (lower is better) Translates to: VRALGCTSHRRRGNS*GKPKWTRLCCRPYS Trigger: ACTGTATGGTCTGCAACACAACCGAGTCCATTTGGGCTTGCCTCAGCTGTTCCCACGTCGCCTGTGGGAAGTACATCCAAGAGCACGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 90 bp | GGAGGTGTGCTTTCCAGCTCGGCTTTCATCTGCTGCTCCAACTCCTaGTGCTGCCTTCTCTTCGCCTCTCGTTTTGCTACCATTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GGVLSSSAFICCSNS*CCLLFASRFATILS Trigger: GGAGAGAATGGTAGCAAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGAGCTGGAAAGCACACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 90 bp | AAACTCTTCCGCGGAGGTGTGCTTTCCAGCTCGGCTTTCATCTGCTaGTCCAACTCCTGCTGCTGCCTTCTCTTCGCCTCTCGTTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: KLFRGGVLSSSAFIC*SNSCCCLLFASRFA Trigger: AGCAAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGAGCTGGAAAGCACACCTCCGCGGAAGAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 90 bp | CGTAAACTCTTCCGCGGAGGTGTGCTTTCCAGCTCGGCTTTCATCTaGTGCTCCAACTCCTGCTGCTGCCTTCTCTTCGCCTCTCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: RKLFRGGVLSSSAFI*CSNSCCCLLFASRF Trigger: AAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGAGCTGGAAAGCACACCTCCGCGGAAGAGTTTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 90 bp | GATAAACCCGAATGTCTGGAGCATACGAAGCCTTTCTCTTTCTCTTaGCCTTCGTTCATCTGCTGTGCCGCCGCCTCCGTGACGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DKPECLEHTKPFSFS*PSFICCAAASVTAE Trigger: CTCAGCCGTCACGGAGGCGGCGGCACAGCAGATGAACGAAGGGCAAGAGAAAGAGAAAGGCTTCGTATGCTCCAGACATTCGGGTTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CCA 90 bp | AAGTGCTTCAGTGCGTGCTCTTGGATGTACTTCCCACAGGCGACGTaGGAACAGCTGAGGCAAGCCCAAATGGACTCGGTTGTGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KCFSACSWMYFPQAT*EQLRQAQMDSVVLQ Trigger: CTGCAACACAACCGAGTCCATTTGGGCTTGCCTCAGCTGTTCCCACGTCGCCTGTGGGAAGTACATCCAAGAGCACGCACTGAAGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CCA 90 bp | TCAGTAACCAGGCACGGCTGGGAGGCAGCATCTTTCCCACTGCACTaGTATCTCTCTGGAAACTCCAGGGACAAGTCCCAGAAGGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVTRHGWEAASFPLH*YLSGNSRDKSQKDS Trigger: AGAATCCTTCTGGGACTTGTCCCTGGAGTTTCCAGAGAGATACCAGTGCAGTGGGAAAGATGCTGCCTCCCAGCCGTGCCTGGTTACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 90 bp | CTGCTGCTCCAACTCCTGCTGCTGCCTTCTCTTCGCCTCTCGTTTTaGTACCATTCTCTCCTGAGTTGGCTCTTGCCCTTTCCTTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLQLLLLPSLRLSF*YHSLLSWLLPFPSN Trigger: ATTGGAAGGAAAGGGCAAGAGCCAACTCAGGAGAGAATGGTAGCAAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CCA 90 bp | CGGTTGTGTTGCAGACCATACAGTACCATTTCTGAGGGTCCAAGATaGAATGGCCTTGAGCAAGCTGCAACTGCTCAACGTGCTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RLCCRPYSTISEGPR*NGLEQAATAQRACT Trigger: GGTGCAAGCACGTTGAGCAGTTGCAGCTTGCTCAAGGCCATTCCATCTTGGACCCTCAGAAATGGTACTGTATGGTCTGCAACACAACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 90 bp | GAAGCATGGCAAACGGTGAGACCAAGGCCCACTCTCCAGACCACATaGCTTGGAACAGGATATGCAATTCATGGCAGAGAGAACTGTACG | + |
|
Preference number: 5 (lower is better) Translates to: EAWQTVRPRPTLQTT*LGTGYAIHGRENCT Trigger: CGTACAGTTCTCTCTGCCATGAATTGCATATCCTGTTCCAAGTCATGTGGTCTGGAGAGTGGGCCTTGGTCTCACCGTTTGCCATGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 90 bp | CAGCTAAGGACTTCATTAGAAGAGGCATCAGTCTCCTTACTGGGGTaGTGGCTATTGGACAGGAGCTCGGGAGGCAAGAGTTTCGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: QLRTSLEEASVSLLG*WLLDRSSGGKSFEC Trigger: ACATTCGAAACTCTTGCCTCCCGAGCTCCTGTCCAATAGCCAGCACCCCAGTAAGGAGACTGATGCCTCTTCTAATGAAGTCCTTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATGCGCGGCTTTGTCCTTaGCTGGGGATGCGGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDARLCP*LGMREV Trigger: CACCTCCCGCATCCCCAGCAAAGGACAAAGCCGCGC...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS GCA 90 bp | AACAAAAAGCGTACATGTCGTTCACCTCGAAGGCAACGGGATGGCTaGTTTCTTGAAAGTGCTTCAGTGCGTGCTCTTGGATGTACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NKKRTCRSPRRQRDG*FLESASVRALGCTS Trigger: GGAAGTACATCCAAGAGCACGCACTGAAGCACTTTCAAGAAAGCAGCCATCCCGTTGCCTTCGAGGTGAACGACATGTACGCTTTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 90 bp | TTACGTCCTGACCATCTGAACCGTTTGAGGTGCAGTCTGAGAACCTaGGGTAGATGGCATATCATAAGCTGCTTCTGGGCTTCTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRPDHLNRLRCSLRT*GRWHIISCFWASVN Trigger: ATTCACAGAAGCCCAGAAGCAGCTTATGATATGCCATCTACCTCAGGTTCTCAGACTGCACCTCAAACGGTTCAGATGGTCAGGACGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS-3UTR CAA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTGTGCACATGCTCAGCTaGGAATCGTTGCAGTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RRSAHLKRIYTDNESPLSVHMLS*ESLQWT Trigger: GGTCCACTGCAACGATTCCAAGCTGAGCATGTGCAC...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS TCA 90 bp | GGTGAATTACGACAGCAGATAAATTATAGAGAAAGCACTCTGGTCTaGGAGCGTTCAGGGTCTCCCTGCAGCAATAAGGCTCCATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GELRQQINYRESTLV*ERSGSPCSNKAPCL Trigger: TAAACATGGAGCCTTATTGCTGCAGGGAGACCCTGAACGCTCTCAGACCAGAGTGCTTTCTCTATAATTTATCTGCTGTCGTAATTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS-3UTR CAA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTGCCCTTTCCTTCCAATaGCTGACTGTTCGAACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRSAHLKRIYTDNESPLSALSFQ*LTVRTK Trigger: CTTGGTTCGAACAGTCAGCAATTGGAAGGAAAGGGC...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CCA 90 bp | AAAATGTTATTCACCACATTCAGAACTTGCTCAATAAGTCTCCTTTaGGAAGTGGGGATGAGGGCTGGTAACTTGGTTCCGGTTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KMLFTTFRTCSISLL*EVGMRAGNLVPVVS Trigger: AGAGACAACCGGAACCAAGTTACCAGCCCTCATCCCCACTTCCCAAAGGAGACTTATTGAGCAAGTTCTGAATGTGGTGAATAACATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS-3UTR CAA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCAAGATGGAATGGCCTaGAGCAAGCTGCAACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDQDGMA*SKLQLL Trigger: GAGCAGTTGCAGCTTGCTCAAGGCCATTCCATCTTG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | CGTAGGTCAGCCCATTTAAAAAGGATATATACAGATAACGAGAGCCCACTGTCTATGGACTCGGTTGTGTaGCAGACCATACAGTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRSAHLKRIYTDNESPLSMDSVV*QTIQYH Trigger: ATGGTACTGTATGGTCTGCAACACAACCGAGTCCAT...AGACAGTGGGCTCTCGTTATCTGTATATATCCTTTTTAAATGGGCTGACCTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATGACCATCTGAACCGTTaGAGGTGCAGTCTGAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDDHLNR*RCSLRT Trigger: GGTTCTCAGACTGCACCTCAAACGGTTCAGATGGTC...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS-3UTR CAA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCCCAAATGGACTCGGTaGTGTTGCAGACCATACAGT | + |
|
Preference number: 5 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDPKWTR*CCRPYS Trigger: ACTGTATGGTCTGCAACACAACCGAGTCCATTTGGG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATCTTCAGTGCGTGCTCTaGGATGTACTTCCCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYLQCVL*DVLPTG Trigger: GCCTGTGGGAAGTACATCCAAGAGCACGCACTGAAG...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 90 bp | CTCTGGAAACTCCAGGGACAAGTCCCAGAAGGATTCTATGGTATCTaGTTTGTTGTCACAAGCAAGACATGTAACCTGACTAAGAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LWKLQGQVPEGFYGI*FVVTSKTCNLTKKL Trigger: CAATTTCTTAGTCAGGTTACATGTCTTGCTTGTGACAACAAATCAGATACCATAGAATCCTTCTGGGACTTGTCCCTGGAGTTTCCAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATGGGATGGCTGCTTTCTaGAAAGTGCTTCAGTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYGMAAF*KVLQCV Trigger: CACGCACTGAAGCACTTTCAAGAAAGCAGCCATCCC...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATCTCCTGAGTTGGCTCTaGCCCTTTCCTTCCAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYLLSWL*PFPSNC Trigger: GCAATTGGAAGGAAAGGGCAAGAGCCAACTCAGGAG...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATGCCTTTCTCTTTCTCTaGCCCTTCGTTCATCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYAFLFL*PFVHLL Trigger: CAGCAGATGAACGAAGGGCAAGAGAAAGAGAAAGGC...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATCACCACATTCAGAACTaGCTCAATAAGTCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDHHIQN*LNKSPL Trigger: CAAAGGAGACTTATTGAGCAAGTTCTGAATGTGGTG...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | AATAAAAACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATGTAACTTGGTTCCGGTaGTCTCTAGTTCACGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NKNNEAQQRRSAHLKRIYVTWFR*SLVHVV Trigger: TACAACGTGAACTAGAGACAACCGGAACCAAGTTAC...ATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS-3UTR CAA 90 bp | AACAATGAAGCACAGCAGCGTAGGTCAGCCCATTTAAAAAGGATATATACAGATTCTGTTTCTGTAAATTaGTCCAACATGTCAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: NNEAQQRRSAHLKRIYTDSVSVN*SNMSVT Trigger: GGTTACTGACATGTTGGACAAATTTACAGAAACAGA...ATCTGTATATATCCTTTTTAAATGGGCTGACCTACGCTGCTGTGCTTCATTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CCA 72 bp | TGCTGGGGATGCGGGAGGTGGGGGCGGTGCCCGCACTaGCACGATTTCGATTGTGGCCGCCTCCTCCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CWGCGRWGRCPH*HDFDCGRLLRG Trigger: TCCTCGGAGGAGGCGGCCACAATCGAAATCGTGCCAGTGCGGGCACCGCCCCCACCTCCCGCATCCCCAGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 72 bp | TTTGTCCTTTGCTGGGGATGCGGGAGGTGGGGGCGGTaGCCGCACTGGCACGATTTCGATTGTGGCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FVLCWGCGRWGR*PHWHDFDCGRL Trigger: GAGGCGGCCACAATCGAAATCGTGCCAGTGCGGGCACCGCCCCCACCTCCCGCATCCCCAGCAAAGGACAAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CAA 72 bp | GAGGTGGGGGCGGTGCCCGCACTGGCACGATTTCGATaGTGGCCGCCTCCTCCGAGGAGCCTTGTAAGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: EVGAVPALARFR*WPPPPRSLVSV Trigger: TACGCTTACAAGGCTCCTCGGAGGAGGCGGCCACAATCGAAATCGTGCCAGTGCGGGCACCGCCCCCACCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CAA 90 bp | GGGATGCGGGAGGTGGGGGCGGTGCCCGCACTGGCACGATTTCGATaGTGGCCGCCTCCTCCGAGGAGCCTTGTAAGCGTAAACTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GMREVGAVPALARFR*WPPPPRSLVSVNSS Trigger: GGAAGAGTTTACGCTTACAAGGCTCCTCGGAGGAGGCGGCCACAATCGAAATCGTGCCAGTGCGGGCACCGCCCCCACCTCCCGCATCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 72 bp | CTGACTGTTCGAACCAAGTTCGAAAGGCTTTCCCCATaGGCACCCGTCTCCTGTGCCAGAGGGCGGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: LTVRTKFERLSP*APVSCARGRRT Trigger: CGTGCGCCGCCCTCTGGCACAGGAGACGGGTGCTCATGGGGAAAGCCTTTCGAACTTGGTTCGAACAGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 72 bp | TTCGTTCATCTGCTGTGCCGCCGCCTCCGTGACGGCTaGGTGCTTATAGGATCGGGCCTTATCGCTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FVHLLCRRLRDG*VLIGSGLIAGS Trigger: GCTGCCAGCGATAAGGCCCGATCCTATAAGCACTCAGCCGTCACGGAGGCGGCGGCACAGCAGATGAACGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 72 bp | CGCGGAGGTGTGCTTTCCAGCTCGGCTTTCATCTGCTaGTCCAACTCCTGCTGCTGCCTTCTCTTCGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RGGVLSSSAFIC*SNSCCCLLFAS Trigger: AGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGAGCTGGAAAGCACACCTCCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 72 bp | TTCCGCGGAGGTGTGCTTTCCAGCTCGGCTTTCATCTaGTGCTCCAACTCCTGCTGCTGCCTTCTCTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: FRGGVLSSSAFI*CSNSCCCLLFA Trigger: GGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGAGCTGGAAAGCACACCTCCGCGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CCA 72 bp | AGGCACGGCTGGGAGGCAGCATCTTTCCCACTGCACTaGTATCTCTCTGGAAACTCCAGGGACAAGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RHGWEAASFPLH*YLSGNSRDKSQ Trigger: CTGGGACTTGTCCCTGGAGTTTCCAGAGAGATACCAGTGCAGTGGGAAAGATGCTGCCTCCCAGCCGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CCA 72 bp | AGTGCGTGCTCTTGGATGTACTTCCCACAGGCGACGTaGGAACAGCTGAGGCAAGCCCAAATGGACTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SACSWMYFPQAT*EQLRQAQMDSV Trigger: AACCGAGTCCATTTGGGCTTGCCTCAGCTGTTCCCACGTCGCCTGTGGGAAGTACATCCAAGAGCACGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 72 bp | CTTGGATGTACTTCCCACAGGCGACGTGGGAACAGCTaGGGCAAGCCCAAATGGACTCGGTTGTGTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGCTSHRRRGNS*GKPKWTRLCCR Trigger: TCTGCAACACAACCGAGTCCATTTGGGCTTGCCTCAGCTGTTCCCACGTCGCCTGTGGGAAGTACATCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 72 bp | CTTTCCAGCTCGGCTTTCATCTGCTGCTCCAACTCCTaGTGCTGCCTTCTCTTCGCCTCTCGTTTTGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: LSSSAFICCSNS*CCLLFASRFAT Trigger: GGTAGCAAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGAGCTGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 72 bp | AGCTCGGCTTTCATCTGCTGCTCCAACTCCTGCTGCTaGCTTCTCTTCGCCTCTCGTTTTGCTACCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSAFICCSNSCC*LLFASRFATIL Trigger: GAGAATGGTAGCAAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS GCA 72 bp | TCCAGCTCGGCTTTCATCTGCTGCTCCAACTCCTGCTaGTGCCTTCTCTTCGCCTCTCGTTTTGCTACCATT | + |
|
Preference number: 6 (lower is better) Translates to: SSSAFICCSNSC*CLLFASRFATI Trigger: AATGGTAGCAAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAGATGAAAGCCGAGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS GCA 72 bp | AGGAGCCTTGTAAGCGTAAACTCTTCCGCGGAGGTGTaGTTTCCAGCTCGGCTTTCATCTGCTGCTCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RSLVSVNSSAEV*FPARLSSAAPT Trigger: AGTTGGAGCAGCAGATGAAAGCCGAGCTGGAAAGCACACCTCCGCGGAAGAGTTTACGCTTACAAGGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS CAA 72 bp | CCAACTCCTGCTGCTGCCTTCTCTTCGCCTCTCGTTTaGCTACCATTCTCTCCTGAGTTGGCTCTTGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PTPAAAFSSPLV*LPFSPELALAL Trigger: AAGGGCAAGAGCCAACTCAGGAGAGAATGGTAGCAAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CAA 90 bp | TCTGCTGCTCCAACTCCTGCTGCTGCCTTCTCTTCGCCTCTCGTTTaGCTACCATTCTCTCCTGAGTTGGCTCTTGCCCTTTCCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SAAPTPAAAFSSPLV*LPFSPELALALSFQ Trigger: TTGGAAGGAAAGGGCAAGAGCCAACTCAGGAGAGAATGGTAGCAAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTGGAGCAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS GCA 72 bp | CAACTCCTGCTGCTGCCTTCTCTTCGCCTCTCGTTTTaGTACCATTCTCTCCTGAGTTGGCTCTTGCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QLLLLPSLRLSF*YHSLLSWLLPF Trigger: AAAGGGCAAGAGCCAACTCAGGAGAGAATGGTAGCAAAACGAGAGGCGAAGAGAAGGCAGCAGCAGGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS TCA 72 bp | TCGTTCACCTCGAAGGCAACGGGATGGCTGCTTTCTTaGAAGTGCTTCAGTGCGTGCTCTTGGATGTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFTSKATGWLLS*KCFSACSWMYF Trigger: GAAGTACATCCAAGAGCACGCACTGAAGCACTTTCAAGAAAGCAGCCATCCCGTTGCCTTCGAGGTGAACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS TCA 72 bp | CAAACGGTGAGACCAAGGCCCACTCTCCAGACCACATaGCTTGGAACAGGATATGCAATTCATGGCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QTVRPRPTLQTT*LGTGYAIHGRE Trigger: CTCTCTGCCATGAATTGCATATCCTGTTCCAAGTCATGTGGTCTGGAGAGTGGGCCTTGGTCTCACCGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS CCA 72 bp | GGAGGCAGCATCTTTCCCACTGCACTGGTATCTCTCTaGAAACTCCAGGGACAAGTCCCAGAAGGATTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: GGSIFPTALVSL*KLQGQVPEGFY Trigger: ATAGAATCCTTCTGGGACTTGTCCCTGGAGTTTCCAGAGAGATACCAGTGCAGTGGGAAAGATGCTGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS CAA 72 bp | ACAGTACCATTTCTGAGGGTCCAAGATGGAATGGCCTaGAGCAAGCTGCAACTGCTCAACGTGCTTGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: TVPFLRVQDGMA*SKLQLLNVLAP Trigger: AGGTGCAAGCACGTTGAGCAGTTGCAGCTTGCTCAAGGCCATTCCATCTTGGACCCTCAGAAATGGTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
||
| CDS CAA 72 bp | GTCGTTCACCTCGAAGGCAACGGGATGGCTGCTTTCTaGAAAGTGCTTCAGTGCGTGCTCTTGGATGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: VVHLEGNGMAAF*KVLQCVLLDVL Trigger: AAGTACATCCAAGAGCACGCACTGAAGCACTTTCAAGAAAGCAGCCATCCCGTTGCCTTCGAGGTGAACGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CAA 90 bp | ACTTCATTAGAAGAGGCATCAGTCTCCTTACTGGGGTGCTGGCTATaGGACAGGAGCTCGGGAGGCAAGAGTTTCGAATGTCCATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TSLEEASVSLLGCWL*DRSSGGKSFECPFS Trigger: TGAGAATGGACATTCGAAACTCTTGCCTCCCGAGCTCCTGTCCAATAGCCAGCACCCCAGTAAGGAGACTGATGCCTCTTCTAATGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 72 bp | CTCCTGAGTTGGCTCTTGCCCTTTCCTTCCAATTGCTaGCTGTTCGAACCAAGTTCGAAAGGCTTTCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLSWLLPFPSNC*LFEPSSKGFPH Trigger: ATGGGGAAAGCCTTTCGAACTTGGTTCGAACAGTCAGCAATTGGAAGGAAAGGGCAAGAGCCAACTCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 72 bp | CTTCTCTTCGCCTCTCGTTTTGCTACCATTCTCTCCTaGGTTGGCTCTTGCCCTTTCCTTCCAATTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLFASRFATILS*VGSCPFLPIAD Trigger: GTCAGCAATTGGAAGGAAAGGGCAAGAGCCAACTCAGGAGAGAATGGTAGCAAAACGAGAGGCGAAGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS TCA 72 bp | GACCATCTGAACCGTTTGAGGTGCAGTCTGAGAACCTaGGGTAGATGGCATATCATAAGCTGCTTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: DHLNRLRCSLRT*GRWHIISCFWA Trigger: AGCCCAGAAGCAGCTTATGATATGCCATCTACCTCAGGTTCTCAGACTGCACCTCAAACGGTTCAGATGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CCA 72 bp | TGCAGACCATACAGTACCATTTCTGAGGGTCCAAGATaGAATGGCCTTGAGCAAGCTGCAACTGCTCAACGT | + |
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Preference number: 6 (lower is better) Translates to: CRPYSTISEGPR*NGLEQAATAQR Trigger: ACGTTGAGCAGTTGCAGCTTGCTCAAGGCCATTCCATCTTGGACCCTCAGAAATGGTACTGTATGGTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CAA 72 bp | TTCTCTCCTGAGTTGGCTCTTGCCCTTTCCTTCCAATaGCTGACTGTTCGAACCAAGTTCGAAAGGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSPELALALSFQ*LTVRTKFERLS Trigger: GGAAAGCCTTTCGAACTTGGTTCGAACAGTCAGCAATTGGAAGGAAAGGGCAAGAGCCAACTCAGGAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CAA 72 bp | AGTCTCCTTTGGGAAGTGGGGATGAGGGCTGGTAACTaGGTTCCGGTTGTCTCTAGTTCACGTTGTATCTTA | + |
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Preference number: 6 (lower is better) Translates to: SLLWEVGMRAGN*VPVVSSSRCIL Trigger: TAAGATACAACGTGAACTAGAGACAACCGGAACCAAGTTACCAGCCCTCATCCCCACTTCCCAAAGGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CAA 90 bp | TGCTCAATAAGTCTCCTTTGGGAAGTGGGGATGAGGGCTGGTAACTaGGTTCCGGTTGTCTCTAGTTCACGTTGTATCTTATCCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: CSISLLWEVGMRAGN*VPVVSSSRCILSRS Trigger: ACTTCTGGATAAGATACAACGTGAACTAGAGACAACCGGAACCAAGTTACCAGCCCTCATCCCCACTTCCCAAAGGAGACTTATTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS GCA 72 bp | CTCGCTGAGTATAAAATAAGATATAAGCTTGGGCCTTaGGTACTTCTTCCATCGTGCACATGCTCAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LAEYKIRYKLGP*VLLPSCTCSAW Trigger: CCAAGCTGAGCATGTGCACGATGGAAGAAGTACGCAAGGCCCAAGCTTATATCTTATTTTATACTCAGCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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| CDS CAA 72 bp | GAGTCACTCGGAACCACACAGGGGTACTTTTTACTTTaGATTGTACTTAGTGTACTCCGTAGTGACTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: ESLGTTQGYFLL*IVLSVLRSDFR Trigger: CCTGAAGTCACTACGGAGTACACTAAGTACAATCAAAAGTAAAAAGTACCCCTGTGTGGTTCCGAGTGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216224.2 |
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