Pregenerated sensors for USP42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051306Ensembl transcript IDs: ENSMUST00000053287.6
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATaGGATACAAGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTG | + |
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Preference number: 1 (lower is better) Translates to: PSWPCTRCLAWRNIT*DTSSQPESVVKQHL Trigger: CAAATGCTGCTTAACCACAGACTCAGGTTGACTACTTGTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| 3UTR CCA 90 bp | GATACAAGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATaGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACG | + |
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Preference number: 1 (lower is better) Translates to: DTSSQPESVVKQHLR*SIPGHYCQCDFMYT Trigger: CGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACTTGTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGAAGCTGGGTTGGGGATaGCTTCTGTTCAAAATGTTG | + |
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Preference number: 2 (lower is better) Translates to: SSQPESVVKQHLRWSIPGKLGWG*LLFKML Trigger: CAACATTTTGAACAGAAGCCATCCCCAACCCAGCTT...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGGTTTATAATTTAAGCTaGGTTGGGGATGGCTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SSQPESVVKQHLRWSIPGVYNLS*VGDGFC Trigger: ACAGAAGCCATCCCCAACCCAGCTTAAATTATAAAC...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| 3UTR CCA 72 bp | CTGTCGCTTGTCCTTTTGAAGTCCATGGTTCCCAGCTaGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATT | + |
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Preference number: 3 (lower is better) Translates to: LSLVLLKSMVPS*PCTRCLAWRNI Trigger: AATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGAACCATGGACTTCAAAAGGACAAGCGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| 3UTR TCA 72 bp | CCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATaGGATACAAGTAGTCAACCTGAGTCTGTGGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: PCTRCLAWRNIT*DTSSQPESVVK Trigger: CTTAACCACAGACTCAGGTTGACTACTTGTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| 3UTR CCA 72 bp | AGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATaGTCTATTCCAGGGCATTATTGTCAGTGTGATTTT | + |
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Preference number: 3 (lower is better) Translates to: SQPESVVKQHLR*SIPGHYCQCDF Trigger: AAAATCACACTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| 3UTR TCA 72 bp | TTTTTGTCTGTAACTAGAAACTTGAAGGGATCAAGCTaGCGACTCAGACTTCAATATCATATTGTCGAGACG | + |
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Preference number: 3 (lower is better) Translates to: FLSVTRNLKGSS*RLRLQYHIVET Trigger: CGTCTCGACAATATGATATTGAAGTCTGAGTCGTCAGCTTGATCCCTTCAAGTTTCTAGTTACAGACAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACTGCCGCTTCTTATGGTaGTGGTCCTCCGGCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYCRFLW*WSSGRG Trigger: GCCCCGGCCGGAGGACCATCACCATAAGAAGCGGCA...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACGGTGTCGGTCCTGCTTaGGCCGCTCTCGGCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYGVGPA*AALGCS Trigger: GCTACAGCCGAGAGCGGCCCAAGCAGGACCGACACC...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACGTCACCTGTGAGTACTaGGGGAGCAGGGCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYVTCEY*GSRAQP Trigger: AGGCTGAGCCCTGCTCCCTCAGTACTCACAGGTGAC...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACGGTGGTGACTATACCTaGTCAGGGAGCGGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYGGDYT*SGSGAQ Trigger: CTGAGCGCCGCTCCCTGAGCAGGTATAGTCACCACC...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACAGCGCAGCCTTCTCTTaGAGATGTCTCTCGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYSAAFS*RCLSRG Trigger: GCCCCTCGAGAGACATCTCCAAGAGAAGGCTGCGCT...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACGCCATGGCAGAGTCCTaGGCCTTCTCAGCTGTATCA | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYAMAES*AFSAVS Trigger: TGATACAGCTGAGAAGGCTCAGGACTCTGCCATGGC...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACGTGTTGCCCAAATTCTaGAGCCCAGCGCCAACTCGA | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYVLPKF*SPAPTR Trigger: TCGAGTTGGCGCTGGGCTCCAGAATTTGGGCAACAC...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGGGGCGGGGAGAGGATTaGCCGGGGCTATGGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQGRGED*PGLWAG Trigger: TCCTGCCCATAGCCCCGGCCAATCCTCTCCCCGCCC...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGCTGGCTCTGTCCCCGTaGCCCAAGTGCTGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQLALSP*PKCWPP Trigger: TGGGGGCCAGCACTTGGGCCACGGGGACAGAGCCAG...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACTGGCAAAACAGGTGTTaGCCAAATTCTGGAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYWQNRC*PNSGAQ Trigger: CTGGGCTCCAGAATTTGGGCAACACCTGTTTTGCCA...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGGCAGCTCCCAGCCCTTaGGGCCCCAGTAGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQAAPSP*GPSSCP Trigger: AGGACAGCTACTGGGGCCGCAAGGGCTGGGAGCTGC...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACGAAAAATCAGACTCCTaGTGGTGCCTGCTTTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYEKSDS*WCLLSR Trigger: TCGAGAAAGCAGGCACCAGCAGGAGTCTGATTTTTC...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGCGTTCACCATGGGCTTaGGACAGGCCTCACTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQRSPWA*DRPHWG Trigger: CCCCCAGTGAGGCCTGTCCCAAGCCCATGGTGAACG...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGCTGTGGCTGCTGTCCTaGACACTCAGCGCAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQLWLLS*TLSAAF Trigger: GAAGGCTGCGCTGAGTGTGCAGGACAGCAGCCACAG...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGCAGGGAGACTGTGGCTaGTGTCCTGCACACTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRQGDCG*CPAHSA Trigger: CGCTGAGTGTGCAGGACAGCAGCCACAGTCTCCCTG...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGTCTGGCAGACCAGGGTaGTGGCCTGGGTGTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRSGRPG*WPGCVC Trigger: ACAGACACACCCAGGCCACCACCCTGGTCTGCCAGA...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGCCAGGGGTGATGTGGTaGAAGGGGTCTGTGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRPGVMW*KGSVCS Trigger: GGAGCACACAGACCCCTTCCACCACATCACCCCTGG...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGGCTCCAGGGGTGATGTaGTGGAAGGGGTCTGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRAPGVM*WKGSVC Trigger: GCACACAGACCCCTTCCACCACATCACCCCTGGAGC...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGGTCTTCTGTCTCCTCTaGCCCCTCTGCGCTGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRVFCLL*PLCAEV Trigger: TACCTCAGCGCAGAGGGGTCAGAGGAGACAGAAGAC...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCTCAGCACCGTCATCTaGAGCAGCTTCTGGCCTATC | + |
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Preference number: 4 (lower is better) Translates to: SSQPESVVKQHLRWSIPGLSTVI*SSFWPI Trigger: GATAGGCCAGAAGCTGCTGCAGATGACGGTGCTGAG...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTCTGTCCCCAGCAGCCTaGTCGGCAGCCCCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVILSPAA*SAAPSQ Trigger: CTGTGAAGGGGCTGCCGAGCAGGCTGCTGGGGACAG...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCCACCACTTCAGCCATaGCAGAGTCCTGAGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SSQPESVVKQHLRWSIPGPPLQP*QSPEPS Trigger: AGAAGGCTCAGGACTCTGCCATGGCTGAAGTGGTGG...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTTCACGTGCTCCCCACTaGAGGAGCGCTCTCTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVISRAPH*RSALSG Trigger: GCCGGAGAGAGCGCTCCTCCAGTGGGGAGCACGTGA...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACCCTAATGGAAGTGTGTaGCTTGAGACATCACTTATT | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYPNGSV*LETSLI Trigger: AATAAGTGATGTCTCAAGTCACACACTTCCATTAGG...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGGATGGGCTCCAGCTGTaGAACAGGGTCCTTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQDGLQL*NRVLWR Trigger: TCTCCAAAGGACCCTGTTTCACAGCTGGAGCCCATC...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTGGTGGGCTCCAGGGGTaGTGTGGTGGAAGGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIGGLQG*CGGRGL Trigger: CAGACCCCTTCCACCACATCACCCCTGGAGCCCACC...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTCCTCTCGGGGGCTGTTaGAGTGGGGCCGTTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIPLGGC*SGAVPS Trigger: GGAAGGAACGGCCCCACTTCAACAGCCCCCGAGAGG...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGTCTTCAGGAACAGACTaGAAAGGAGCAGGCGTCACC | + |
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Preference number: 4 (lower is better) Translates to: SSQPESVVKQHLRWSIPGSSGTD*KGAGVT Trigger: GGTGACGCCTGCTCCTTTGCAGTCTGTTCCTGAAGA...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTTCCTTCCCCCGGGATTaGAGCTCCCAGCCCTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVISFPRD*SSQPLR Trigger: CCGCAAGGGCTGGGAGCTGCAATCCCGGGGGAAGGA...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACTCCTGCTGGTGCCTaGTTTCTCGATCCCGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRTPAGA*FLDPGV Trigger: AACACCGGGATCGAGAAAGCAGGCACCAGCAGGAGT...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGGTGTTCTTCATCACATaGGAAGGCAGCTGGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSQPESVVKQHLRWSIPGVFFIT*EGSWGP Trigger: TGGACCCCAGCTGCCTTCCCATGTGATGAAGAACAC...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGAAGGCTCCTGAGCTTTaGGTCCCACATGGCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRKAPEL*VPHGLH Trigger: ATGGAGGCCATGTGGGACCCAAAGCTCAGGAGCCTT...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGTGCTCATCTTTTCCTTaGCTGGGGAAGGCTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SSQPESVVKQHLRWSIPGCSSFP*LGKAPE Trigger: CTCAGGAGCCTTCCCCAGCCAAGGAAAAGATGAGCA...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGCCATCACCTAGGACTTaGTCCTTTGGTGGTGATGGC | + |
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Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRPSPRT*SFGGDG Trigger: GCCATCACCACCAAAGGATCAAGTCCTAGGTGATGG...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTGCTGGGGAAGGCTCCTaGGCTTTGGGTCCCACATGG | + |
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Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIAGEGS*ALGPTW Trigger: CCATGTGGGACCCAAAGCTCAGGAGCCTTCCCCAGC...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGCCACTTTCCGGAGGCTaGTCATCTTTTCCTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRPLSGG*SSFPWL Trigger: CAGCCAAGGAAAAGATGAGCAGCCTCCGGAAAGTGG...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACACAAATCTTTTCAGATaGAAACAGGACCTTTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYTNLFR*KQDLLR Trigger: CCTCAAAAGGTCCTGTTTCCATCTGAAAAGATTTGT...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGGTAATTGGCGAGGGGTaGCGTGTAAGTCAGACACTG | + |
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Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQVIGEG*RVSQTL Trigger: CAGTGTCTGACTTACACGCCACCCCTCGCCAATTAC...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTCCTTGCCGTTCACCATaGGCTTGGGACAGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVIPCRSP*AWDRPH Trigger: GTGAGGCCTGTCCCAAGCCCATGGTGAACGGCAAGG...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTGTGTGTAGCTCGGGCTaGACCTGGCAGCTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIVCSSG*TWQLAL Trigger: CAGTGCCAGCTGCCAGGTCCAGCCCGAGCTACACAC...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGCCAGCGCCAACTCGATaGCTTTGTTGCCACTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQPAPTR*LCCHLR Trigger: TCTTAAGTGGCAACAAAGTCATCGAGTTGGCGCTGG...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTCTTCTTTGGTACAGCTaGTGGTGGGCTCCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVILLWYS*WWAPGV Trigger: CACCCCTGGAGCCCACCATCAGCTGTACCAAAGAAG...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTGGCAGACCAGGGTGGTaGCCTGGGTGTGTCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIGRPGW*PGCVCL Trigger: TAGACAGACACACCCAGGCCACCACCCTGGTCTGCC...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGGGGTCCAATAAACCCTaGAGCCACCTGCTTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQGSNKP*SHLLVV Trigger: AACAACAAGCAGGTGGCTCCAGGGTTTATTGGACCC...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTGCTGGACCTGGCAGCTaGCACTGTCAAATGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIAGPGS*HCQMPG Trigger: GCCTGGCATTTGACAGTGCCAGCTGCCAGGTCCAGC...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGATGGAGTCATTCATCTaGTACCAGAGGCCATTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSQPESVVKQHLRWSIPGMESFI*YQRPLL Trigger: TAGCAATGGCCTCTGGTATCAGATGAATGACTCCAT...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGAACATGCTTTCTGCATaGCATCGACCGTGTACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSQPESVVKQHLRWSIPGNMLSA*HRPCTE Trigger: TTCAGTACACGGTCGATGCCATGCAGAAAGCATGTT...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGATCAGAGTATGCTCCTaGAAAATCAGACTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRIRVCS*KIRLLL Trigger: CAGCAGGAGTCTGATTTTTCAGGAGCATACTCTGAT...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTACATGGGAAGGCAGCTaGGGTCCAATAAACCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVITWEGS*GPINPG Trigger: TCCAGGGTTTATTGGACCCCAGCTGCCTTCCCATGT...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGTTCTCCAGGCTTTTGTaGACTTTCTTTTCTAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQPESVVKQHLRWSIPGFSRLL*TFFSRR Trigger: CCGTCTAGAAAAGAAAGTCCACAAAAGCCTGGAGAA...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTGGAAACAGGACCTTTTaGGGAGGAGCAATGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVIGNRTF*GGAMPS Trigger: TGATGGCATTGCTCCTCCTCAAAAGGTCCTGTTTCC...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGTTTTGTTTCTTGGGGTaGTCTGGAATAACTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRFCFLG*SGITEG Trigger: ACCCTCAGTTATTCCAGATCACCCCAAGAAACAAAA...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTACTGCAATGCGGCATTaGCAAAACAGGTGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVITAMRH*QNRCCP Trigger: TGGGCAACACCTGTTTTGCCAATGCCGCATTGCAGT...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTGGGTTGCTAAGTGCCTaGGTAATGTGTGTCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVIGLLSA*VMCVCI Trigger: GATGCAGACACACATTACCCAGGCACTTAGCAACCC...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTCATCTTTTCCTTGGCTaGGGAAGGCTCCTGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVIHLFLG*GRLLSF Trigger: AAAGCTCAGGAGCCTTCCCCAGCCAAGGAAAAGATG...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGAGTCCTCCGACTTCCTaGAATGCCTTTTCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQSPPTS*NAFSFS Trigger: AGAAAAAGAAAAGGCATTCCAGGAAGTCGGAGGACT...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| 3UTR CAA 72 bp | ACAAGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTaGAGATGGTCTATTCCAGGGCATTATTGTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSQPESVVKQH*RWSIPGHYCQC Trigger: ACACTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTGTGATCTGGAATAACTaGGGGTCTGGTAACAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVIVIWNN*GSGNRP Trigger: TGGTCTGTTACCAGACCCTCAGTTATTCCAGATCAC...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTAGTCAGACACTGCAATaGGGCATTGGCAAAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVISQTLQ*GIGKTG Trigger: ACCTGTTTTGCCAATGCCGCATTGCAGTGTCTGACT...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGTGTGTGTCTGCATCGTaGACATCATACAAAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQCVSAS*TSYKIL Trigger: AAGGATTTTGTATGATGTGCACGATGCAGACACACA...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGCTTTCCATCCTTAAATaGTTCGTTTTCTCCCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRLSILK*FVFSRK Trigger: TTTCCGGGAGAAAACGAAGCATTTAAGGATGGAAAG...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCAAAACATAAATAATTaGCTCTCCATTGGGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSQPESVVKQHLRWSIPGQNINN*LSIGLR Trigger: TCTCAGCCCAATGGAGAGCCAATTATTTATGTTTTG...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTTCCCTGACCCAAGCATaGTCATTTTCCAAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVISLTQA*SFSKWW Trigger: CCACCATTTGGAAAATGAGCATGCTTGGGTCAGGGA...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTCACTGGTGGACACGATaGAGTCATTCATCTGATACC | + |
|
Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIHWWTR*SHSSDT Trigger: GGTATCAGATGAATGACTCCATCGTGTCCACCAGTG...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTGGCAAAGCGCTTCAGTaGGATGGTAAGAACATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIGKALQ*DGKNIR Trigger: TCTAATGTTCTTACCATCTCACTGAAGCGCTTTGCC...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR TCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTTCACATCATGGGACCTaGTATAAAAGAGCACGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVISHHGT*YKRARK Trigger: CTTACGTGCTCTTTTATATCAGGTCCCATGATGTGA...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTCATACAAAATCCTTCTaGGTGGCATGTCTTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIHTKSF*VACLGV Trigger: CACTCCAAGACATGCCACGCAGAAGGATTTTGTATG...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTTTTAAACATGCTTTCTaGATGGCATCGACCGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVIFKHAF*MASTVY Trigger: GTACACGGTCGATGCCATGCAGAAAGCATGTTTAAA...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTTCATGGGCATCTTCTTaGTTTCCAAAACGGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVISWASS*FPKRKC Trigger: ACACTTCCGTTTTGGAAACCAAGAAGATGCCCATGA...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CCA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACATTAGAGGACCTATaGATTGTGAATCTCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRTLEDL*IVNLFE Trigger: TTCAAAGAGATTCACAATCCATAGGTCCTCTAATGT...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTCAATTAAAACCAGTGTaGACCAGCACAGCATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVIQLKPV*TSTAYK Trigger: TTTGTATGCTGTGCTGGTGCACACTGGTTTTAATTG...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR GCA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTTTTTTAGACTTTTTGTaGTTCTTCACCCTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVCTKEAPRSSDKVIFLDFL*FFTLGS Trigger: GGAGCCAAGGGTGAAGAAGCACAAAAAGTCTAAAAA...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 39% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | GATGGTCCTCCGGCCGGGGCCTGCTGTCCCTCACGTGCTCCCCACTaGAGGAGCGCTCTCTCCGGCTCCGATAGTGTCCTCGGTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: DGPPAGACCPSRAPH*RSALSGSDSVLGPL Trigger: AAGTGGACCGAGGACACTATCGGAGCCGGAGAGAGCGCTCCTCCAGTGGGGAGCACGTGAGGGACAGCAGGCCCCGGCCGGAGGACCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 90 bp | GCTTTGGGTCCCACATGGCCTCCATCGCCTCTGTCCCCAGCAGCCTaGTCGGCAGCCCCTTCACAGGAGCTGGTGGTGGTCCTGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALGPTWPPSPLSPAA*SAAPSQELVVVLSG Trigger: GCCTGACAGGACCACCACCAGCTCCTGTGAAGGGGCTGCCGAGCAGGCTGCTGGGGACAGAGGCGATGGAGGCCATGTGGGACCCAAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 90 bp | TGTAGCAGTGCCGCTTCTTATGGTGATGGTCCTCCGGCCGGGGCCTaGTGTCCCTCACGTGCTCCCCACTGGAGGAGCGCTCTCTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSSAASYGDGPPAGA*CPSRAPHWRSALSG Trigger: GCCGGAGAGAGCGCTCCTCCAGTGGGGAGCACGTGAGGGACAGCAGGCCCCGGCCGGAGGACCATCACCATAAGAAGCGGCACTGCTACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 90 bp | CGGCTCCAGTCCTGCTCCAGGCCACTCCTAATCCGTGAGTGGTGGTaGCTATACCTGCTCAGGGAGCGGCGCTCAGGGCTGGCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLQSCSRPLLIREWW*LYLLRERRSGLALS Trigger: GGACAGAGCCAGCCCTGAGCGCCGCTCCCTGAGCAGGTATAGTCACCACCACTCACGGATTAGGAGTGGCCTGGAGCAGGACTGGAGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | CCCTGGAGCCACCTGCTTGTTGTTGACTACCCGCTGACTGACTCCTaGGCGGGGAGAGGATTGGCCGGGGCTATGGGCAGGATGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PWSHLLVVDYPLTDS*AGRGLAGAMGRMSR Trigger: TCTGCTCATCCTGCCCATAGCCCCGGCCAATCCTCTCCCCGCCCAGGAGTCAGTCAGCGGGTAGTCAACAACAAGCAGGTGGCTCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 90 bp | GCTGGCTCTGTCCCCGTGGCCCAAGTGCTGGCCCCCATTGCAGTATaGATTAGTAGGGTGTCGGTCCTGCTTGGGCCGCTCTCGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AGSVPVAQVLAPIAV*ISRVSVLLGPLSAV Trigger: TACAGCCGAGAGCGGCCCAAGCAGGACCGACACCCTACTAATTCATACTGCAATGGGGGCCAGCACTTGGGCCACGGGGACAGAGCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 90 bp | ATGGTGGTACCGGCTCCAGTCCTGCTCCAGGCCACTCCTAATCCGTaGGTGGTGGTGACTATACCTGCTCAGGGAGCGGCGCTCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MVVPAPVLLQATPNP*VVVTIPAQGAALRA Trigger: AGCCCTGAGCGCCGCTCCCTGAGCAGGTATAGTCACCACCACTCACGGATTAGGAGTGGCCTGGAGCAGGACTGGAGCCGGTACCACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 90 bp | GGTCCAATAAACCCTGGAGCCACCTGCTTGTTGTTGACTACCCGCTaGCTGACTCCTGGGCGGGGAGAGGATTGGCCGGGGCTATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPINPGATCLLLTTR*LTPGRGEDWPGLWA Trigger: TGCCCATAGCCCCGGCCAATCCTCTCCCCGCCCAGGAGTCAGTCAGCGGGTAGTCAACAACAAGCAGGTGGCTCCAGGGTTTATTGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | GTGTCCTCGGTCCACTTTCCGGAGGCTGCTCATCTTTTCCTTGGCTaGGGAAGGCTCCTGAGCTTTGGGTCCCACATGGCCTCCATCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSSVHFPEAAHLFLG*GRLLSFGSHMASIA Trigger: GGCGATGGAGGCCATGTGGGACCCAAAGCTCAGGAGCCTTCCCCAGCCAAGGAAAAGATGAGCAGCCTCCGGAAAGTGGACCGAGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | CTATACCTGCTCAGGGAGCGGCGCTCAGGGCTGGCTCTGTCCCCGTaGCCCAAGTGCTGGCCCCCATTGCAGTATGAATTAGTAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LYLLRERRSGLALSP*PKCWPPLQYELVGC Trigger: ACACCCTACTAATTCATACTGCAATGGGGGCCAGCACTTGGGCCACGGGGACAGAGCCAGCCCTGAGCGCCGCTCCCTGAGCAGGTATAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 90 bp | GCTCTCTCCGGCTCCGATAGTGTCCTCGGTCCACTTTCCGGAGGCTaGTCATCTTTTCCTTGGCTGGGGAAGGCTCCTGAGCTTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALSGSDSVLGPLSGG*SSFPWLGKAPELWV Trigger: GACCCAAAGCTCAGGAGCCTTCCCCAGCCAAGGAAAAGATGAGCAGCCTCCGGAAAGTGGACCGAGGACACTATCGGAGCCGGAGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACCCGTTCACCATGGGCTaGGGACAGGCCTCACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYPFTMG*GQASLG Trigger: CCCCAGTGAGGCCTGTCCCAAGCCCATGGTGAACGG...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 90 bp | GGAGCAGGGCTCAGCCTCTCCACCACTTCAGCCATGGCAGAGTCCTaGGCCTTCTCAGCTGTATCACCTTTCACTGCTTCGGTTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGLSLSTTSAMAES*AFSAVSPFTASVGW Trigger: CCAGCCAACCGAAGCAGTGAAAGGTGATACAGCTGAGAAGGCTCAGGACTCTGCCATGGCTGAAGTGGTGGAGAGGCTGAGCCCTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 90 bp | AACGGACGAGTCTTCTTTGGTACAGCTGATGGTGGGCTCCAGGGGTaGTGTGGTGGAAGGGGTCTGTGTGCTCCCATTGGTGACAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NGRVFFGTADGGLQG*CGGRGLCAPIGDSL Trigger: GAGGCTGTCACCAATGGGAGCACACAGACCCCTTCCACCACATCACCCCTGGAGCCCACCATCAGCTGTACCAAAGAAGACTCGTCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | GATAGTGTCCTCGGTCCACTTTCCGGAGGCTGCTCATCTTTTCCTTaGCTGGGGAAGGCTCCTGAGCTTTGGGTCCCACATGGCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DSVLGPLSGGCSSFP*LGKAPELWVPHGLH Trigger: ATGGAGGCCATGTGGGACCCAAAGCTCAGGAGCCTTCCCCAGCCAAGGAAAAGATGAGCAGCCTCCGGAAAGTGGACCGAGGACACTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACCAGCGCAGCCTTCTCTaGGAGATGTCTCTCGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYQRSLL*EMSLEG Trigger: CCCCTCGAGAGACATCTCCAAGAGAAGGCTGCGCTG...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 90 bp | CGAGGTAGACTGTATTGCAGAAGGGTTAGTGATGGTGGAGGAGGGTaGCGCCTTACTAGGAGCCTCCAGACAAGGGCCATGGAGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RGRLYCRRVSDGGGG*RLTRSLQTRAMEAV Trigger: AACAGCCTCCATGGCCCTTGTCTGGAGGCTCCTAGTAAGGCGGCACCCTCCTCCACCATCACTAACCCTTCTGCAATACAGTCTACCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | CGTGTTCTTCATCACATGGGAAGGCAGCTGGGGTCCAATAAACCCTaGAGCCACCTGCTTGTTGTTGACTACCCGCTGACTGACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVLHHMGRQLGSNKP*SHLLVVDYPLTDSW Trigger: CCAGGAGTCAGTCAGCGGGTAGTCAACAACAAGCAGGTGGCTCCAGGGTTTATTGGACCCCAGCTGCCTTCCCATGTGATGAAGAACACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACCACTGCAATGCGGCATaGGCAAAACAGGTGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYHCNAA*AKQVLP Trigger: GGGCAACACCTGTTTTGCCAATGCCGCATTGCAGTG...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 90 bp | ACTAGGAGCCTCCAGACAAGGGCCATGGAGGCTGTTATTCAGTGGTaGCTGACCCTGGCGAGCAGGCAACTTGTTGTGAATACTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: TRSLQTRAMEAVIQW*LTLASRQLVVNTDG Trigger: ACCATCAGTATTCACAACAAGTTGCCTGCTCGCCAGGGTCAGGCACCACTGAATAACAGCCTCCATGGCCCTTGTCTGGAGGCTCCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGTTCCTTCCCCCGGGATaGCAGCTCCCAGCCCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSQPESVVKQHLRWSIPGFLPPG*QLPALA Trigger: CGCAAGGGCTGGGAGCTGCAATCCCGGGGGAAGGAA...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 90 bp | AGAGTCTCATACCTCCGCTTCCTCGACTTGACACTTTTGTGTTCATaGAAGCGCTCAGGGAGACTGTGGCTGCTGTCCTGCACACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVSYLRFLDLTLLCS*KRSGRLWLLSCTLS Trigger: GCTGAGTGTGCAGGACAGCAGCCACAGTCTCCCTGAGCGCTTTCATGAACACAAAAGTGTCAAGTCGAGGAAGCGGAGGTATGAGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | CTTACTAGGAGCCTCCAGACAAGGGCCATGGAGGCTGTTATTCAGTaGTGCCTGACCCTGGCGAGCAGGCAACTTGTTGTGAATACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LTRSLQTRAMEAVIQ*CLTLASRQLVVNTD Trigger: ATCAGTATTCACAACAAGTTGCCTGCTCGCCAGGGTCAGGCACCACTGAATAACAGCCTCCATGGCCCTTGTCTGGAGGCTCCTAGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | TGGAAAAGAGGTTTTCTGTGTGTAGCTCGGGCTGGACCTGGCAGCTaGCACTGTCAAATGCCAGGCTGTTCTCTTGTGAGTCACTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WKRGFLCVARAGPGS*HCQMPGCSLVSHCL Trigger: CAGACAGTGACTCACAAGAGAACAGCCTGGCATTTGACAGTGCCAGCTGCCAGGTCCAGCCCGAGCTACACACAGAAAACCTCTTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACATGACGAACATCGGCTaGATAACATCCCCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYMTNIG*ITSPGL Trigger: CAACCCTGGGGATGTTATCAAGCCGATGTTCGTCAT...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGGTTGGCTGGCTCGGGTaGGCAGTCAAGTCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQPESVVKQHLRWSIPGVGWLG*AVKSPG Trigger: CCCTGGAGACTTGACTGCCAACCCGAGCCAGCCAAC...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 90 bp | TCCATGTCTTCAGGTGAGACCGCCTCACAACTGCCAGGCTGGTTCTaGCAGGTTGATGGGTCTGAAGGTTCAGTTTTGTCAACTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SMSSGETASQLPGWF*QVDGSEGSVLSTMV Trigger: GACCATAGTTGACAAAACTGAACCTTCAGACCCATCAACCTGTCAGAACCAGCCTGGCAGTTGTGAGGCGGTCTCACCTGAAGACATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 90 bp | CTTTTTCTTCCGGTGTCTATGGAGGTCAGCATCAGAGTATGCTCCTaGAAAATCAGACTCCTGCTGGTGCCTGCTTTCTCGATCCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLPVSMEVSIRVCS*KIRLLLVPAFSIPV Trigger: CACCGGGATCGAGAAAGCAGGCACCAGCAGGAGTCTGATTTTTCAGGAGCATACTCTGATGCTGACCTCCATAGACACCGGAAGAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTTGGGCGGGGAGAGGATaGGCCGGGGCTATGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWSIPGHYCQCDFMYTVIWAGRG*AGAMGR Trigger: CCTGCCCATAGCCCCGGCCAATCCTCTCCCCGCCCA...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | TTAAGTTTGGAAAAGAGGTTTTCTGTGTGTAGCTCGGGCTGGACCTaGCAGCTGGCACTGTCAAATGCCAGGCTGTTCTCTTGTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSLEKRFSVCSSGWT*QLALSNARLFSCES Trigger: TGACTCACAAGAGAACAGCCTGGCATTTGACAGTGCCAGCTGCCAGGTCCAGCCCGAGCTACACACAGAAAACCTCTTTTCCAAACTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | AGACCATTAAGTTTGGAAAAGAGGTTTTCTGTGTGTAGCTCGGGCTaGACCTGGCAGCTGGCACTGTCAAATGCCAGGCTGTTCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPLSLEKRFSVCSSG*TWQLALSNARLFSC Trigger: ACAAGAGAACAGCCTGGCATTTGACAGTGCCAGCTGCCAGGTCCAGCCCGAGCTACACACAGAAAACCTCTTTTCCAAACTTAATGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 90 bp | CTATGGAGGTCAGCATCAGAGTATGCTCCTGAAAAATCAGACTCCTaGTGGTGCCTGCTTTCTCGATCCCGGTGTTTATCTTTGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWRSASEYAPEKSDS*WCLLSRSRCLSLDF Trigger: GAAGTCCAAAGATAAACACCGGGATCGAGAAAGCAGGCACCAGCAGGAGTCTGATTTTTCAGGAGCATACTCTGATGCTGACCTCCATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGTTTCCACCGGTGAAGTaGGCAAAGCGCTTCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSQPESVVKQHLRWSIPGFPPVK*AKRFSE Trigger: CTCACTGAAGCGCTTTGCCAACTTCACCGGTGGAAA...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | TCCCAGCTGGCCGTGCACCAGGTGTCTAGCGTGGAGGAACATTACATGAGATACGGAAGACCATTAAGTTaGGAAAAGAGGTTTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQLAVHQVSSVEEHYMRYGRPLS*EKRFSV Trigger: CACAGAAAACCTCTTTTCCAAACTTAATGGTCTTCC...GTATCTCATGTAATGTTCCTCCACGCTAGACACCTGGTGCACGGCCAGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 90 bp | TGGAGGTCAGCATCAGAGTATGCTCCTGAAAAATCAGACTCCTGCTaGTGCCTGCTTTCTCGATCCCGGTGTTTATCTTTGGACTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WRSASEYAPEKSDSC*CLLSRSRCLSLDFF Trigger: AAAGAAGTCCAAAGATAAACACCGGGATCGAGAAAGCAGGCACCAGCAGGAGTCTGATTTTTCAGGAGCATACTCTGATGCTGACCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGTGGAAACAGGACCTTTaGAGGAGGAGCAATGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SSQPESVVKQHLRWSIPGWKQDL*RRSNAI Trigger: GATGGCATTGCTCCTCCTCAAAAGGTCCTGTTTCCA...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 90 bp | ATTGATGACGAACATCGGCTTGATAACATCCCCAGGGTTGCTAAGTaGCTGGGTAATGTGTGTCTGCATCGTGCACATCATACAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: IDDEHRLDNIPRVAK*LGNVCLHRAHHTKS Trigger: GGATTTTGTATGATGTGCACGATGCAGACACACATTACCCAGGCACTTAGCAACCCTGGGGATGTTATCAAGCCGATGTTCGTCATCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 90 bp | TTGGTAAGCTTGAAGGTCTCAAGGATTCTGTCTTCAGGAACAGACTaGAAAGGAGCAGGCGTCACCTTTCCAGGAAGACCATTAAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVSLKVSRILSSGTD*KGAGVTFPGRPLSL Trigger: CAAACTTAATGGTCTTCCTGGAAAGGTGACGCCTGCTCCTTTGCAGTCTGTTCCTGAAGACAGAATCCTTGAGACCTTCAAGCTTACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGTCTGCGTGGCATGTCTaGGAGTGTTCATGGGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQSAWHV*ECSWDN Trigger: GTTATCCCATGAACACTCCAAGACATGCCACGCAGA...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGATAACATCCCCAGGGTaGCTAAGTGCCTGGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQITSPG*LSAWVM Trigger: CATTACCCAGGCACTTAGCAACCCTGGGGATGTTAT...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGTTGGTGGTGATGGCTTaGATTTTTCAGGTACAGACG | + |
|
Preference number: 5 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRLVVMA*IFQVQT Trigger: CGTCTGTACCTGAAAAATCAAAGCCATCACCACCAA...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGGCCAACTCGATGACTTaGTTGCCACTTAAGACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSQPESVVKQHLRWSIPGANSMT*LPLKTN Trigger: ATTTGTCTTAAGTGGCAACAAAGTCATCGAGTTGGC...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | GAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGCATTATTGTCAGTTCATGGGCATCTTCTaGGTTTCCAAAACGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ESVVKQHLRWSIPGHYCQFMGIF*VSKTEV Trigger: CACTTCCGTTTTGGAAACCAAGAAGATGCCCATGAA...CTGACAATAATGCCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AGTAGTCAACCTGAGTCTGTGGTTAAGCAGCATTTGAGATGGTCTATTCCAGGGACTGATGGTGATTTTTaGTTTCTTGGGGTGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQPESVVKQHLRWSIPGTDGDF*FLGVIW Trigger: CCAGATCACCCCAAGAAACAAAAAATCACCATCAGT...CCCTGGAATAGACCATCTCAAATGCTGCTTAACCACAGACTCAGGTTGACTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTGGACCCTTTGCCTGGTaGGTAAGCTTGAAGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLCTVCTKEAPRSSDKVIGPFAW*VSLKVS Trigger: TGAGACCTTCAAGCTTACCAACCAGGCAAAGGGTCC...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTACGGACGAGTCTTCTTaGGTACAGCTGATGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RWSIPGHYCQCDFMYTVITDESS*VQLMVG Trigger: GCCCACCATCAGCTGTACCAAAGAAGACTCGTCCGT...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTTTGAGACATCACTTATaGAAGACACAGCGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KLCTVCTKEAPRSSDKVILRHHL*KTQRPS Trigger: GCTGGGGCGCTGTGTCTTCAATAAGTGATGTCTCAA...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGACAAAGTTATTTTGGCAAAACAGGTGTaGCCCAAATTCTGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLCTVCTKEAPRSSDKVILAKQV*PKFWSP Trigger: TGGGCTCCAGAATTTGGGCAACACCTGTTTTGCCAA...AATAACTTTGTCCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | TTGTCCATGGTAAACTCTGTACAGTATGTACTAAAGAAGCACCACGCAGTTCGGAACTCGATGACTTTGTaGCCACTTAAGACAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSMVNSVQYVLKKHHAVRNSMTL*PLKTNL Trigger: AAGATTTGTCTTAAGTGGCAACAAAGTCATCGAGTT...CCGAACTGCGTGGTGCTTCTTTAGTACATACTGTACAGAGTTTACCATGGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS-3UTR CAA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTCTAGGACTTGATCCTTaGGTGGTGATGGCTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: RWSIPGHYCQCDFMYTVILGLDP*VVMALI Trigger: AATCAAAGCCATCACCACCAAAGGATCAAGTCCTAG...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS-3UTR CAA 90 bp | AGATGGTCTATTCCAGGGCATTATTGTCAGTGTGATTTTATGTACACGGTAATTTCCTTCTCCAGGCTTTaGTGGACTTTCTTTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RWSIPGHYCQCDFMYTVISFSRL*WTFFSR Trigger: TCTAGAAAAGAAAGTCCACAAAAGCCTGGAGAAGGA...AATTACCGTGTACATAAAATCACACTGACAATAATGCCCTGGAATAGACCATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 72 bp | CCGGCCGGGGCCTGCTGTCCCTCACGTGCTCCCCACTaGAGGAGCGCTCTCTCCGGCTCCGATAGTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PAGACCPSRAPH*RSALSGSDSVL Trigger: GAGGACACTATCGGAGCCGGAGAGAGCGCTCCTCCAGTGGGGAGCACGTGAGGGACAGCAGGCCCCGGCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | GCCGCTTCTTATGGTGATGGTCCTCCGGCCGGGGCCTaGTGTCCCTCACGTGCTCCCCACTGGAGGAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AASYGDGPPAGA*CPSRAPHWRSA Trigger: AGCGCTCCTCCAGTGGGGAGCACGTGAGGGACAGCAGGCCCCGGCCGGAGGACCATCACCATAAGAAGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 72 bp | GCCGTTCCTTCCCCCGGGATTGCAGCTCCCAGCCCTTaGGGCCCCAGTAGCTGTCCTTGTATGGCCGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVPSPGIAAPSP*GPSSCPCMAVQ Trigger: CTGGACGGCCATACAAGGACAGCTACTGGGGCCGCAAGGGCTGGGAGCTGCAATCCCGGGGGAAGGAACGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | AACCCTGGAGCCACCTGCTTGTTGTTGACTACCCGCTaGCTGACTCCTGGGCGGGGAGAGGATTGGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NPGATCLLLTTR*LTPGRGEDWPG Trigger: CCCCGGCCAATCCTCTCCCCGCCCAGGAGTCAGTCAGCGGGTAGTCAACAACAAGCAGGTGGCTCCAGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | CCGGCTCCAGTCCTGCTCCAGGCCACTCCTAATCCGTaGGTGGTGGTGACTATACCTGCTCAGGGAGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PAPVLLQATPNP*VVVTIPAQGAA Trigger: CGCCGCTCCCTGAGCAGGTATAGTCACCACCACTCACGGATTAGGAGTGGCCTGGAGCAGGACTGGAGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CCA 72 bp | CACCTGCTTGTTGTTGACTACCCGCTGACTGACTCCTaGGCGGGGAGAGGATTGGCCGGGGCTATGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HLLVVDYPLTDS*AGRGLAGAMGR Trigger: CCTGCCCATAGCCCCGGCCAATCCTCTCCCCGCCCAGGAGTCAGTCAGCGGGTAGTCAACAACAAGCAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CCA 72 bp | CTCCCAGCCCTTGCGGCCCCAGTAGCTGTCCTTGTATaGCCGTCCAGACTGGACAAGGCGGTCATGCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: LPALAAPVAVLV*PSRLDKAVMLT Trigger: CGTGAGCATGACCGCCTTGTCCAGTCTGGACGGCCATACAAGGACAGCTACTGGGGCCGCAAGGGCTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | GTCCCCGTGGCCCAAGTGCTGGCCCCCATTGCAGTATaGATTAGTAGGGTGTCGGTCCTGCTTGGGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPVAQVLAPIAV*ISRVSVLLGPL Trigger: GAGCGGCCCAAGCAGGACCGACACCCTACTAATTCATACTGCAATGGGGGCCAGCACTTGGGCCACGGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | TCCTGCTCCAGGCCACTCCTAATCCGTGAGTGGTGGTaGCTATACCTGCTCAGGGAGCGGCGCTCAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCSRPLLIREWW*LYLLRERRSGL Trigger: CAGCCCTGAGCGCCGCTCCCTGAGCAGGTATAGTCACCACCACTCACGGATTAGGAGTGGCCTGGAGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | CGGCGCTCAGGGCTGGCTCTGTCCCCGTGGCCCAAGTaGTGGCCCCCATTGCAGTATGAATTAGTAGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRSGLALSPWPK*WPPLQYELVGC Trigger: ACACCCTACTAATTCATACTGCAATGGGGGCCAGCACTTGGGCCACGGGGACAGAGCCAGCCCTGAGCGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CCA 72 bp | CGCTCAGGGCTGGCTCTGTCCCCGTGGCCCAAGTGCTaGCCCCCATTGCAGTATGAATTAGTAGGGTGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSGLALSPWPKC*PPLQYELVGCR Trigger: CCGACACCCTACTAATTCATACTGCAATGGGGGCCAGCACTTGGGCCACGGGGACAGAGCCAGCCCTGAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 72 bp | CTGGCGCCCACTTTAGCCTTGCCGTTCACCATGGGCTaGGGACAGGCCTCACTGGGGGAAGTCGACGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LAPTLALPFTMG*GQASLGEVDVV Trigger: CACAACGTCGACTTCCCCCAGTGAGGCCTGTCCCAAGCCCATGGTGAACGGCAAGGCTAAAGTGGGCGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | CTTGGCCAGGCCCTTCGACTCCTCATCAGACTCTTCTaGGGACTCGGCCCCATAGGGGACAAGCACACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGQALRLLIRLF*GLGPIGDKHTG Trigger: GCCAGTGTGCTTGTCCCCTATGGGGCCGAGTCCTCAGAAGAGTCTGATGAGGAGTCGAAGGGCCTGGCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | GCACCGTCATCTGCAGCAGCTTCTGGCCTATCGGAGTaGGTGCCGGCCATCATGTCCACACCGTTCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: APSSAAASGLSE*VPAIMSTPFSL Trigger: CAAGGAGAACGGTGTGGACATGATGGCCGGCACTCACTCCGATAGGCCAGAAGCTGCTGCAGATGACGGTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | AGGCTGCTCATCTTTTCCTTGGCTGGGGAAGGCTCCTaGGCTTTGGGTCCCACATGGCCTCCATCGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLLIFSLAGEGS*ALGPTWPPSPL Trigger: CAGAGGCGATGGAGGCCATGTGGGACCCAAAGCTCAGGAGCCTTCCCCAGCCAAGGAAAAGATGAGCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | CGTCATCTGCAGCAGCTTCTGGCCTATCGGAGTGAGTaGCGGCCATCATGTCCACACCGTTCTCCTTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RHLQQLLAYRSE*RPSCPHRSPWP Trigger: TGGCCAAGGAGAACGGTGTGGACATGATGGCCGGCACTCACTCCGATAGGCCAGAAGCTGCTGCAGATGACG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | TTGAAGCTCATGGGAGGAAGCCTCAGCACCGTCATCTaGAGCAGCTTCTGGCCTATCGGAGTGAGTGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LKLMGGSLSTVI*SSFWPIGVSAG Trigger: GCCGGCACTCACTCCGATAGGCCAGAAGCTGCTGCAGATGACGGTGCTGAGGCTTCCTCCCATGAGCTTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | GGCTCCGATAGTGTCCTCGGTCCACTTTCCGGAGGCTaGTCATCTTTTCCTTGGCTGGGGAAGGCTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSDSVLGPLSGG*SSFPWLGKAPE Trigger: CTCAGGAGCCTTCCCCAGCCAAGGAAAAGATGAGCAGCCTCCGGAAAGTGGACCGAGGACACTATCGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CCA 72 bp | GTCCACTTTCCGGAGGCTGCTCATCTTTTCCTTGGCTaGGGAAGGCTCCTGAGCTTTGGGTCCCACATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VHFPEAAHLFLG*GRLLSFGSHMA Trigger: GGCCATGTGGGACCCAAAGCTCAGGAGCCTTCCCCAGCCAAGGAAAAGATGAGCAGCCTCCGGAAAGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | CAGCCTCCGGTATCTCAAGGGGACTGGGCTCATCACTaGTGGGCTCCAGCTGTGAAACAGGGTCCTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QPPVSQGDWAHH*WAPAVKQGPLE Trigger: CTCCAAAGGACCCTGTTTCACAGCTGGAGCCCATCAGTGATGAGCCCAGTCCCCTTGAGATACCGGAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CCA 72 bp | AGCCTCCAGACAAGGGCCATGGAGGCTGTTATTCAGTaGTGCCTGACCCTGGCGAGCAGGCAACTTGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLQTRAMEAVIQ*CLTLASRQLVV Trigger: CACAACAAGTTGCCTGCTCGCCAGGGTCAGGCACCACTGAATAACAGCCTCCATGGCCCTTGTCTGGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | GTCTTCTTTGGTACAGCTGATGGTGGGCTCCAGGGGTaGTGTGGTGGAAGGGGTCTGTGTGCTCCCATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VFFGTADGGLQG*CGGRGLCAPIG Trigger: ACCAATGGGAGCACACAGACCCCTTCCACCACATCACCCCTGGAGCCCACCATCAGCTGTACCAAAGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | CTGTATTGCAGAAGGGTTAGTGATGGTGGAGGAGGGTaGCGCCTTACTAGGAGCCTCCAGACAAGGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LYCRRVSDGGGG*RLTRSLQTRAM Trigger: CATGGCCCTTGTCTGGAGGCTCCTAGTAAGGCGGCACCCTCCTCCACCATCACTAACCCTTCTGCAATACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CCA 72 bp | AGCCTTCTCAGCTGTATCACCTTTCACTGCTTCGGTTaGCTGGCTCGGGTTGGCAGTCAAGTCTCCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLLSCITFHCFG*LARVGSQVSRV Trigger: GACCCTGGAGACTTGACTGCCAACCCGAGCCAGCCAACCGAAGCAGTGAAAGGTGATACAGCTGAGAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 72 bp | GAGCCTTCTCAGCTGTATCACCTTTCACTGCTTCGGTaGGCTGGCTCGGGTTGGCAGTCAAGTCTCCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: EPSQLYHLSLLR*AGSGWQSSLQG Trigger: ACCCTGGAGACTTGACTGCCAACCCGAGCCAGCCAACCGAAGCAGTGAAAGGTGATACAGCTGAGAAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 90 bp | AAACCCTCCACAGGTTCAGCTGAGACAACAACGGACGAGTCTTCTTaGGTACAGCTGATGGTGGGCTCCAGGGGTGATGTGGTGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KPSTGSAETTTDESS*VQLMVGSRGDVVEG Trigger: CCCTTCCACCACATCACCCCTGGAGCCCACCATCAGCTGTACCAAAGAAGACTCGTCCGTTGTTGTCTCAGCTGAACCTGTGGAGGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 72 bp | GGTAAAGTAAGAGTTTCTGCTCACACCCGTCACCTGTaGGTACTGAGGGAGCAGGGCTCAGCCTCTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GKVRVSAHTRHL*VLREQGSASPP Trigger: TGGTGGAGAGGCTGAGCCCTGCTCCCTCAGTACTCACAGGTGACGGGTGTGAGCAGAAACTCTTACTTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | CTGTGTCCATGTCTTCAGGTGAGACCGCCTCACAACTaGCAGGCTGGTTCTGACAGGTTGATGGGTCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LCPCLQVRPPHN*QAGSDRLMGLK Trigger: CTTCAGACCCATCAACCTGTCAGAACCAGCCTGGCAGTTGTGAGGCGGTCTCACCTGAAGACATGGACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | CTCCAGACAAGGGCCATGGAGGCTGTTATTCAGTGGTaGCTGACCCTGGCGAGCAGGCAACTTGTTGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LQTRAMEAVIQW*LTLASRQLVVN Trigger: ATTCACAACAAGTTGCCTGCTCGCCAGGGTCAGGCACCACTGAATAACAGCCTCCATGGCCCTTGTCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | AGAGTCCTGAGCCTTCTCAGCTGTATCACCTTTCACTaGTTCGGTTGGCTGGCTCGGGTTGGCAGTCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVLSLLSCITFH*FGWLARVGSQV Trigger: GACTTGACTGCCAACCCGAGCCAGCCAACCGAAGCAGTGAAAGGTGATACAGCTGAGAAGGCTCAGGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 72 bp | CATCACATGGGAAGGCAGCTGGGGTCCAATAAACCCTaGAGCCACCTGCTTGTTGTTGACTACCCGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: HHMGRQLGSNKP*SHLLVVDYPLT Trigger: AGTCAGCGGGTAGTCAACAACAAGCAGGTGGCTCCAGGGTTTATTGGACCCCAGCTGCCTTCCCATGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 72 bp | GTGGTGCCATTCAAGTGTGGCGTGTTCTTCATCACATaGGAAGGCAGCTGGGGTCCAATAAACCCTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VVPFKCGVFFIT*EGSWGPINPGA Trigger: GGCTCCAGGGTTTATTGGACCCCAGCTGCCTTCCCATGTGATGAAGAACACGCCACACTTGAATGGCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CCA 72 bp | GGTTTTCTGTGTGTAGCTCGGGCTGGACCTGGCAGCTaGCACTGTCAAATGCCAGGCTGTTCTCTTGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GFLCVARAGPGS*HCQMPGCSLVS Trigger: ACTCACAAGAGAACAGCCTGGCATTTGACAGTGCCAGCTGCCAGGTCCAGCCCGAGCTACACACAGAAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CCA 72 bp | AATCTCTCCCTGACCCAAGCATGCTCATTTTCCAAATaGTGGTACCGGCTCCAGTCCTGCTCCAGGCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: NLSLTQACSFSK*WYRLQSCSRPL Trigger: GAGTGGCCTGGAGCAGGACTGGAGCCGGTACCACCATTTGGAAAATGAGCATGCTTGGGTCAGGGAGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 72 bp | TACCTCCGCTTCCTCGACTTGACACTTTTGTGTTCATaGAAGCGCTCAGGGAGACTGTGGCTGCTGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YLRFLDLTLLCS*KRSGRLWLLSC Trigger: GCAGGACAGCAGCCACAGTCTCCCTGAGCGCTTTCATGAACACAAAAGTGTCAAGTCGAGGAAGCGGAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 72 bp | TTTTGTGTTCATGAAAGCGCTCAGGGAGACTGTGGCTaGTGTCCTGCACACTCAGCGCAGCCTTCTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FCVHESAQGDCG*CPAHSAQPSLG Trigger: TCCAAGAGAAGGCTGCGCTGAGTGTGCAGGACAGCAGCCACAGTCTCCCTGAGCGCTTTCATGAACACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 72 bp | AAGTGTGGCGTGTTCTTCATCACATGGGAAGGCAGCTaGGGTCCAATAAACCCTGGAGCCACCTGCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KCGVFFITWEGS*GPINPGATCLL Trigger: CAACAAGCAGGTGGCTCCAGGGTTTATTGGACCCCAGCTGCCTTCCCATGTGATGAAGAACACGCCACACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CCA 72 bp | GAAAAGAGGTTTTCTGTGTGTAGCTCGGGCTGGACCTaGCAGCTGGCACTGTCAAATGCCAGGCTGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EKRFSVCSSGWT*QLALSNARLFS Trigger: AGAGAACAGCCTGGCATTTGACAGTGCCAGCTGCCAGGTCCAGCCCGAGCTACACACAGAAAACCTCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 72 bp | AGTTTGGAAAAGAGGTTTTCTGTGTGTAGCTCGGGCTaGACCTGGCAGCTGGCACTGTCAAATGCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLEKRFSVCSSG*TWQLALSNARL Trigger: CAGCCTGGCATTTGACAGTGCCAGCTGCCAGGTCCAGCCCGAGCTACACACAGAAAACCTCTTTTCCAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CAA 72 bp | ACAGGTTCAGCTGAGACAACAACGGACGAGTCTTCTTaGGTACAGCTGATGGTGGGCTCCAGGGGTGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: TGSAETTTDESS*VQLMVGSRGDV Trigger: CACATCACCCCTGGAGCCCACCATCAGCTGTACCAAAGAAGACTCGTCCGTTGTTGTCTCAGCTGAACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CAA 90 bp | CAGGCACTGGCCCTAATGGAAGTGTGTGACTTGAGACATCACTTATaGAAGACACAGCGCCCCAGCTGGCAGAGCCTGTGTCCATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QALALMEVCDLRHHL*KTQRPSWQSLCPCL Trigger: AAGACATGGACACAGGCTCTGCCAGCTGGGGCGCTGTGTCTTCAATAAGTGATGTCTCAAGTCACACACTTCCATTAGGGCCAGTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 72 bp | TGTCCCACCGCAGCTTGTCCTGGTAGAATCTCTCCCTaGCCCAAGCATGCTCATTTTCCAAATGGTGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: CPTAACPGRISP*PKHAHFPNGGT Trigger: GGTACCACCATTTGGAAAATGAGCATGCTTGGGTCAGGGAGAGATTCTACCAGGACAAGCTGCGGTGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS TCA 72 bp | CCGGTGTCTATGGAGGTCAGCATCAGAGTATGCTCCTaGAAAATCAGACTCCTGCTGGTGCCTGCTTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PVSMEVSIRVCS*KIRLLLVPAFS Trigger: CGAGAAAGCAGGCACCAGCAGGAGTCTGATTTTTCAGGAGCATACTCTGATGCTGACCTCCATAGACACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 72 bp | TGCACAGAAGTCGAAGCAGTAGCAGGACTGGCCCTATaGACGCTGGTGTTTCCGTTAGGGCTTGACACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CTEVEAVAGLAL*TLVFPLGLDTE Trigger: TTCTGTGTCAAGCCCTAACGGAAACACCAGCGTCAATAGGGCCAGTCCTGCTACTGCTTCGACTTCTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CAA 90 bp | GACTGCAAAGGAGCAGGCGTCACCTTTCCAGGAAGACCATTAAGTTaGGAAAAGAGGTTTTCTGTGTGTAGCTCGGGCTGGACCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DCKGAGVTFPGRPLS*EKRFSVCSSGWTWQ Trigger: CTGCCAGGTCCAGCCCGAGCTACACACAGAAAACCTCTTTTCCAAACTTAATGGTCTTCCTGGAAAGGTGACGCCTGCTCCTTTGCAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 90 bp | AATAAACTACAGCACCAGGCACTGGCCCTAATGGAAGTGTGTGACTaGAGACATCACTTATTGAAGACACAGCGCCCCAGCTGGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NKLQHQALALMEVCD*RHHLLKTQRPSWQS Trigger: GCTCTGCCAGCTGGGGCGCTGTGTCTTCAATAAGTGATGTCTCAAGTCACACACTTCCATTAGGGCCAGTGCCTGGTGCTGTAGTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | TCTGGAATAACTGAGGGTCTGGTAACAGACCAGTTCTaGACAGAAGTCGAAGCAGTAGCAGGACTGGCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SGITEGLVTDQF*TEVEAVAGLAL Trigger: TAGGGCCAGTCCTGCTACTGCTTCGACTTCTGTGCAGAACTGGTCTGTTACCAGACCCTCAGTTATTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | GAACATCGGCTTGATAACATCCCCAGGGTTGCTAAGTaGCTGGGTAATGTGTGTCTGCATCGTGCACATCAT | + |
|
Preference number: 6 (lower is better) Translates to: EHRLDNIPRVAK*LGNVCLHRAHH Trigger: ATGATGTGCACGATGCAGACACACATTACCCAGGCACTTAGCAACCCTGGGGATGTTATCAAGCCGATGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | ACACAGAACTACTTGGTGTGTCTTTCACTGGCGTGGTaGCATTCAAGTGTGGCGTGTTCTTCATCACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: TQNYLVCLSLAW*HSSVACSSSHG Trigger: CCCATGTGATGAAGAACACGCCACACTTGAATGGCACCACGCCAGTGAAAGACACACCAAGTAGTTCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 72 bp | TTGATGACGAACATCGGCTTGATAACATCCCCAGGGTaGCTAAGTGCCTGGGTAATGTGTGTCTGCATCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LMTNIGLITSPG*LSAWVMCVCIV Trigger: CACGATGCAGACACACATTACCCAGGCACTTAGCAACCCTGGGGATGTTATCAAGCCGATGTTCGTCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 72 bp | GCTATACGCCGCATTTCATTGATGACGAACATCGGCTaGATAACATCCCCAGGGTTGCTAAGTGCCTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AIRRISLMTNIG*ITSPGLLSAWV Trigger: TACCCAGGCACTTAGCAACCCTGGGGATGTTATCAAGCCGATGTTCGTCATCAATGAAATGCGGCGTATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | TCAGCATCAGAGTATGCTCCTGAAAAATCAGACTCCTaGTGGTGCCTGCTTTCTCGATCCCGGTGTTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: SASEYAPEKSDS*WCLLSRSRCLS Trigger: AGATAAACACCGGGATCGAGAAAGCAGGCACCAGCAGGAGTCTGATTTTTCAGGAGCATACTCTGATGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 72 bp | CCAAAACGGAAGTGTCTAGCTATACGCCGCATTTCATaGATGACGAACATCGGCTTGATAACATCCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PKRKCLAIRRIS*MTNIGLITSPG Trigger: CCCTGGGGATGTTATCAAGCCGATGTTCGTCATCAATGAAATGCGGCGTATAGCTAGACACTTCCGTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 90 bp | CGCATTTCATTGATGACGAACATCGGCTTGATAACATCCCCAGGGTaGCTAAGTGCCTGGGTAATGTGTGTCTGCATCGTGCACATCATA | + |
|
Preference number: 6 (lower is better) Translates to: RISLMTNIGLITSPG*LSAWVMCVCIVHII Trigger: TATGATGTGCACGATGCAGACACACATTACCCAGGCACTTAGCAACCCTGGGGATGTTATCAAGCCGATGTTCGTCATCAATGAAATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS CAA 90 bp | AAGTGTCTAGCTATACGCCGCATTTCATTGATGACGAACATCGGCTaGATAACATCCCCAGGGTTGCTAAGTGCCTGGGTAATGTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KCLAIRRISLMTNIG*ITSPGLLSAWVMCV Trigger: GACACACATTACCCAGGCACTTAGCAACCCTGGGGATGTTATCAAGCCGATGTTCGTCATCAATGAAATGCGGCGTATAGCTAGACACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | TTTCAGATGGAAACAGGACCTTTTGAGGAGGAGCAATaGCATCACCTAGGACTTGATCCTTTGGTGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: FQMETGPFEEEQ*HHLGLDPLVVM Trigger: CATCACCACCAAAGGATCAAGTCCTAGGTGATGGCATTGCTCCTCCTCAAAAGGTCCTGTTTCCATCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
||
| CDS GCA 72 bp | GAGTTTTCTCCATCCAGTTGTTCTGGCTTCACAAACTaGTCTAACGCCTTGGTAACACTCTGTGCAGCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: EFSPSSCSGFTN*SNALVTLCAAL Trigger: TAAGGCTGCACAGAGTGTTACCAAGGCGTTAGAGCAGTTTGTGAAGCCAGAACAACTGGATGGAGAAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 72 bp | AGTATGCTCCTGAAAAATCAGACTCCTGCTGGTGCCTaGTTTCTCGATCCCGGTGTTTATCTTTGGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SMLLKNQTPAGA*FLDPGVYLWTS Trigger: AGAAGTCCAAAGATAAACACCGGGATCGAGAAAGCAGGCACCAGCAGGAGTCTGATTTTTCAGGAGCATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 72 bp | TTGACACAGAACTACTTGGTGTGTCTTTCACTGGCGTaGTGCCATTCAAGTGTGGCGTGTTCTTCATCACAT | + |
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Preference number: 6 (lower is better) Translates to: LTQNYLVCLSLA*CHSSVACSSSH Trigger: ATGTGATGAAGAACACGCCACACTTGAATGGCACCACGCCAGTGAAAGACACACCAAGTAGTTCTGTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CAA 72 bp | TCCAGTTGTTCTGGCTTCACAAACTGCTCTAACGCCTaGGTAACACTCTGTGCAGCCTTAATCTCCAACGTT | + |
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Preference number: 6 (lower is better) Translates to: SSCSGFTNCSNA*VTLCAALISNV Trigger: AACGTTGGAGATTAAGGCTGCACAGAGTGTTACCAAGGCGTTAGAGCAGTTTGTGAAGCCAGAACAACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CAA 72 bp | ACCCTTGGCTCCTCTAGCGTGTCCTTCTCCAGGCTTTaGTGGACTTTCTTTTCTAGACGGCCATCATTATTT | + |
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Preference number: 6 (lower is better) Translates to: TLGSSSVSFSRL*WTFFSRRPSLF Trigger: AAATAATGATGGCCGTCTAGAAAAGAAAGTCCACAAAAGCCTGGAGAAGGACACGCTAGAGGAGCCAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CAA 90 bp | TCTTGGTTTCCAAAACGGAAGTGTCTAGCTATACGCCGCATTTCATaGATGACGAACATCGGCTTGATAACATCCCCAGGGTTGCTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SWFPKRKCLAIRRIS*MTNIGLITSPGLLS Trigger: ACTTAGCAACCCTGGGGATGTTATCAAGCCGATGTTCGTCATCAATGAAATGCGGCGTATAGCTAGACACTTCCGTTTTGGAAACCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CAA 90 bp | TTTTCTCCATCCAGTTGTTCTGGCTTCACAAACTGCTCTAACGCCTaGGTAACACTCTGTGCAGCCTTAATCTCCAACGTTATGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: FSPSSCSGFTNCSNA*VTLCAALISNVMSR Trigger: TCTGGACATAACGTTGGAGATTAAGGCTGCACAGAGTGTTACCAAGGCGTTAGAGCAGTTTGTGAAGCCAGAACAACTGGATGGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 72 bp | GTGTTGCCCAAATTCTGGAGCCCAGCGCCAACTCGATaGCTTTGTTGCCACTTAAGACAAATCTTTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: VLPKFWSPAPTR*LCCHLRQIFSD Trigger: ATCTGAAAAGATTTGTCTTAAGTGGCAACAAAGTCATCGAGTTGGCGCTGGGCTCCAGAATTTGGGCAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS TCA 72 bp | TATTTTCTAGAGTCTCATACCTCCGCTTCCTCGACTTaGCACTTTTGTGTTCATGAAAGCGCTCAGGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: YFLESHTSASST*HFCVHESAQGD Trigger: GTCTCCCTGAGCGCTTTCATGAACACAAAAGTGTCAAGTCGAGGAAGCGGAGGTATGAGACTCTAGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 72 bp | TGCACATCATACAAAATCCTTCTGCGTGGCATGTCTTaGAGTGTTCATGGGATAACATGTAATTGGCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CTSYKILLRGMS*SVHGITCNWRG Trigger: CCCTCGCCAATTACATGTTATCCCATGAACACTCCAAGACATGCCACGCAGAAGGATTTTGTATGATGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CAA 72 bp | CACATCATGGGACCTGATATAAAAGAGCACGTAAGCTaGCTGGTTAAGCACTGCTCTGATATCACTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HIMGPDIKEHVS*LVKHCSDITGG Trigger: TCCACCAGTGATATCAGAGCAGTGCTTAACCAGCAAGCTTACGTGCTCTTTTATATCAGGTCCCATGATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS GCA 72 bp | GATATAAAAGAGCACGTAAGCTTGCTGGTTAAGCACTaGTCTGATATCACTGGTGGACACGATGGAGTCATT | + |
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Preference number: 6 (lower is better) Translates to: DIKEHVSLLVKH*SDITGGHDGVI Trigger: AATGACTCCATCGTGTCCACCAGTGATATCAGAGCAGTGCTTAACCAGCAAGCTTACGTGCTCTTTTATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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| CDS CCA 72 bp | CGCTTCAGTGAGATGGTAAGAACATTAGAGGACCTATaGATTGTGAATCTCTTTGAAGCTGGAACCATTTTT | + |
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Preference number: 6 (lower is better) Translates to: RFSEMVRTLEDL*IVNLFEAGTIF Trigger: AAAAATGGTTCCAGCTTCAAAGAGATTCACAATCCATAGGTCCTCTAATGTTCTTACCATCTCACTGAAGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053287.6 |
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