Pregenerated sensors for USP38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038250Ensembl transcript IDs: ENSMUST00000042724.8
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCAGAGACTaGCAGCTGGGGTGGAAGGTGCTATCGCCTCCAGAGACTCACCAT | + |
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Preference number: 1 (lower is better) Translates to: SGVQRRGQRRQQPRD*QLGWKVLSPPETHH Trigger: ATGGTGAGTCTCTGGAGGCGATAGCACCTTCCACCCCAGCTGCCAGTCTCTGGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR CCA 90 bp | TGCAACGCCGAGGACAGCGGAGACAGCAGCCCAGAGACTGGCAGCTaGGGTGGAAGGTGCTATCGCCTCCAGAGACTCACCATCTCTACT | + |
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Preference number: 1 (lower is better) Translates to: CNAEDSGDSSPETGS*GGRCYRLQRLTIST Trigger: AGTAGAGATGGTGAGTCTCTGGAGGCGATAGCACCTTCCACCCCAGCTGCCAGTCTCTGGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR TCA 90 bp | CCTTGTGTGAATTCACTTGCCACGTGTGTAAATGACACTTGTTCCTaGATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PCVNSLATCVNDTCS*IWSATPRTAETAAQ Trigger: CTGGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGTCATTTACACACGTGGCAAGTGAATTCACACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR TCA 90 bp | ATTCAGAGACTCACCTCCTTTAAAACACATAGGAGATACACTCCCTaGAACAGGATTTTAAAGTCCTTGGACAACTGGAAATCCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: IQRLTSFKTHRRYTP*NRILKSLDNWKSYK Trigger: TTTGTAGGATTTCCAGTTGTCCAAGGACTTTAAAATCCTGTTTCAGGGAGTGTATCTCCTATGTGTTTTAAAGGAGGTGAGTCTCTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR-3UTR CCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGACTGGCAGCTGGGGTaGAAGGTGCTATCGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KTFRRSQREPIFELQYCKDWQLG*KVLSPP Trigger: TGGAGGCGATAGCACCTTCCACCCCAGCTGCCAGTC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR-3UTR CCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGAAAACCCCTGCCCTCTaGCGTCATGCACCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KTFRRSQREPIFELQYCKKTPAL*RHAPCV Trigger: CACACAAGGTGCATGACGCCAGAGGGCAGGGGTTTT...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR CCA 72 bp | CAACGCCGAGGACAGCGGAGACAGCAGCCCAGAGACTaGCAGCTGGGGTGGAAGGTGCTATCGCCTCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: QRRGQRRQQPRD*QLGWKVLSPPE Trigger: CTCTGGAGGCGATAGCACCTTCCACCCCAGCTGCCAGTCTCTGGGCTGCTGTCTCCGCTGTCCTCGGCGTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR CCA 72 bp | CAGCGGAGACAGCAGCCCAGAGACTGGCAGCTGGGGTaGAAGGTGCTATCGCCTCCAGAGACTCACCATCTC | + |
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Preference number: 3 (lower is better) Translates to: QRRQQPRDWQLG*KVLSPPETHHL Trigger: GAGATGGTGAGTCTCTGGAGGCGATAGCACCTTCCACCCCAGCTGCCAGTCTCTGGGCTGCTGTCTCCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR TCA 72 bp | AATTCACTTGCCACGTGTGTAAATGACACTTGTTCCTaGATCTGGAGTGCAACGCCGAGGACAGCGGAGACA | + |
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Preference number: 3 (lower is better) Translates to: NSLATCVNDTCS*IWSATPRTAET Trigger: TGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGTCATTTACACACGTGGCAAGTGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR TCA 72 bp | CTCACCTCCTTTAAAACACATAGGAGATACACTCCCTaGAACAGGATTTTAAAGTCCTTGGACAACTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LTSFKTHRRYTP*NRILKSLDNWK Trigger: TTTCCAGTTGTCCAAGGACTTTAAAATCCTGTTTCAGGGAGTGTATCTCCTATGTGTTTTAAAGGAGGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCACCGCCCCCACCAGTTaGCCCACAGCTTCCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPTAPTS*PTASWW Trigger: CCACCAGGAAGCTGTGGGCCAACTGGTGGGGGCGGT...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCCCACCTGGAGCAGGCTaGAGAGATCCAGCACCGACG | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPPPGAG*RDPAPT Trigger: CGTCGGTGCTGGATCTCTTCAGCCTGCTCCAGGTGG...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCGAAGCAGATGCAGCTTaGAGGGCCCGGGCTCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPEADAA*RARARA Trigger: TGCTCGAGCCCGGGCCCTGCAAGCTGCATCTGCTTC...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCAACATGGCCTCGCACTaGGCCTCGTCGAGCCAATGC | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPNMASH*ASSSQC Trigger: GCATTGGCTCGACGAGGCGCAGTGCGAGGCCATGTT...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCGCCTCCAGCACCTGGTaGCCCACTTGTCGCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPASSTW*PTCRWK Trigger: TTTCCAGCGACAAGTGGGCCACCAGGTGCTGGAGGC...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCGGGGTGGATCTCCATTaGCCCAGACACCACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPGVDLH*PRHHWL Trigger: CAGCCAGTGGTGTCTGGGCCAATGGAGATCCACCCC...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCTCGTCAGGTCAAACATaGCCTCGCACTGCGCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPSSGQT*PRTAPR Trigger: ACGAGGCGCAGTGCGAGGCCATGTTTGACCTGACGA...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCCACGTATCTACATGCTaGGCCAATGGCCAGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPHVSTC*ANGQDS Trigger: GCTGTCCTGGCCATTGGCTCAGCATGTAGATACGTG...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCCGTAGTTCCTTCTCCTaGGTGGACACGCACTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPRSSFS*VDTHWK Trigger: TTTCCAGTGCGTGTCCACTCAGGAGAAGGAACTACG...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCATCTGCAGAGGAATATaGTGCACCAGGCTTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPICRGI*CTRLAK Trigger: CTTGGCAAGCCTGGTGCAGCATATTCCTCTGCAGAT...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCGTTCCTTCTCCTGAGTaGACACGCACTGGAAATGAC | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPVPSPE*TRTGND Trigger: GTCATTTCCAGTGCGTGTCCACTCAGGAGAAGGAAC...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCTACATGCTGAGCCAATaGCCAGGACAGCCAGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPYMLSQ*PGQPVN Trigger: ATTGACTGGCTGTCCTGGCCATTGGCTCAGCATGTA...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCTACTGGCTCTTCTTCTaGGTCAGCGACACTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPYWLFF*VSDTGL Trigger: CAAACCAGTGTCGCTGACCCAGAAGAAGAGCCAGTA...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCTGGCCCACAGCTTCCTaGTGGGTCATTGTCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPWPTAS*WVIVIK Trigger: TTTGATGACAATGACCCACCAGGAAGCTGTGGGCCA...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCTCACCTCCTGGGTTCTaGGGTACATCTTTACTGATG | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPSPPGF*GTSLLM Trigger: CATCAGTAAAGATGTACCTCAGAACCCAGGAGGTGA...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCCCTAGTAAACAACTCTaGGAGGGTGCTAATGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPPSKQL*EGANAR Trigger: TCTGGCATTAGCACCCTCCCAGAGTTGTTTACTAGG...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCCCAAGTCCTGTTCAATaGCTGTATTGGGGCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPPSPVQ*LYWGFL Trigger: TAGAAAGCCCCAATACAGTCATTGAACAGGACTTGG...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCTGTGCTTTCACCTCCTaGGTTCTGAGGTACATCTTT | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPCAFTS*VLRYIF Trigger: AAAGATGTACCTCAGAACCCAGGAGGTGAAAGCACA...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCGAGGACACACCAGAGTaGACAACAACAGAACTTAAT | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPEDTPE*TTTELN Trigger: ATTAAGTTCTGTTGTTGTGCACTCTGGTGTGTCCTC...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCAGCAGTTCTTTTAACTaGCAACTCCAAAACCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPSSSFN*QLQNQR Trigger: CCTCTGGTTTTGGAGTTGCCAGTTAAAAGAACTGCT...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGTTGAGGGGCAGCGGGTaGGAGGAGCTCACCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKLRGSG*EELTRP Trigger: AGGCCTGGTGAGCTCCTCGCACCCGCTGCCCCTCAA...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCACGCTGGAAAGGGTCCTaGCCCTCCAGGATGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTARWKGS*PSRMRR Trigger: CCGCCTCATCCTGGAGGGCCAGGACCCTTTCCAGCG...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGCCGGGCACAGAGCACTaGCTCCGGCCTCTCGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKPGTEH*LRPLAN Trigger: GTTTGCGAGAGGCCGGAGCCAGTGCTCTGTGCCCGG...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCTGTTGTCCTTTGTTATaGCATCCATCAGCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPCCPLL*HPSALS Trigger: AGAAAGAGCTGATGGATGCCATAACAAAGGACAACA...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCTTCAATTCTTGTTCCTaGAAATACAGCTTGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TLVPESGVQRRGQRRQQPFNSCS*KYSLLS Trigger: GGACAACAAGCTGTATTTGCAGGAACAAGAATTGAA...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCATGGCCCACTTGTCGCTaGAAAGGGTCCTGGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAWPTCR*KGSWPS Trigger: GGAGGGCCAGGACCCTTTCCAGCGACAAGTGGGCCA...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAGTCTGCCAACTGTATTaGAGCCTCCTCCACCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAVCQLY*SLLHRP Trigger: GGGGCGGTGGAGGAGGCTTCAATACAGTTGGCAGAC...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGTCCTTCCTGTCCACTaGGTGGTAGCCCTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKVLPVH*VVALLK Trigger: CTTCAGCAGGGCTACCACTCAGTGGACAGGAAGGAC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAGAGAAGGTAGCAGCGTaGAGGGCTCAGCCTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAEKVAA*RAQPSK Trigger: TTTGGAAGGCTGAGCCCTCCACGCTGCTACCTTCTC...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAGACACGCACTGGAAATaGCCTATCGTTCGAACCAGC | + |
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Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTADTHWK*PIVRTS Trigger: GCTGGTTCGAACGATAGGTCATTTCCAGTGCGTGTC...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGTACTAGGAAGGCTGTaGTGGAAGGTAGGCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKVLGRL*WKVGHH Trigger: GTGATGGCCTACCTTCCAGCACAGCCTTCCTAGTAC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAGAATGTAGTCCAGGATaGCGACGTCCTTCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAECSPG*RRPSCP Trigger: TGGACAGGAAGGACGTCGCCATCCTGGACTACATTC...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGGGGCACATCTGGTATaGAGACTCTGTACCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKGAHLV*RLCTCD Trigger: ATCACAGGTACAGAGTCTTCATACCAGATGTGCCCC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGCGAGGGCTCAAAGGATaGATCTGTGGAAGAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKRGLKG*ICGRDA Trigger: AGCATCTCTTCCACAGATGCATCCTTTGAGCCCTCG...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGCATATGAGAGAGGACTaGAAGAGCACCAGGTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKHMRED*KSTRSH Trigger: GTGAGACCTGGTGCTCTTGCAGTCCTCTCTCATATG...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGCCCACAGCTTCCTGGTaGGTCATTGTCATCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKPTASW*VIVIKS Trigger: GGATTTGATGACAATGACCCACCAGGAAGCTGTGGG...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGACACGAAAGTCTTGTTaGAGAAGGACTCGAACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKTRKSC*RRTRTP Trigger: CGGAGTTCGAGTCCTTCTTCAACAAGACTTTCGTGT...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGTTGACAGAAGGTAACTaGCAGTTTCCCTTTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKLTEGN*QFPFGD Trigger: GTCCCCAAAGGGAAACTGTCAGTTACCTTCTGTCAA...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAGTTCGAACCAGCTGTTaGCAGAAGGTAACTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAVRTSC*QKVTDS Trigger: ACTGTCAGTTACCTTCTGTCAACAGCTGGTTCGAAC...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAAGGACTGTGATCATCTaGAGAGGAATATGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTARTVII*RGICCT Trigger: GGTGCAGCATATTCCTCTGCAGATGATCACAGTCCT...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGCAGTCACTGAAGTTGTaGTTTCACCTCCTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKQSLKL*FHLLGS Trigger: AGAACCCAGGAGGTGAAAGCACAACTTCAGTGACTG...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGGCTCCTCCGTGATTTaGATAGTTTTCTCTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKGSSVI*IVFSAF Trigger: GAACGCAGAGAAAACTATGCAAATCACGGAGGAGCC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGAAGATGCCAAAGCATTaGATTGAGAAGTCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKKMPKH*IEKSRR Trigger: GCGCCTGGACTTCTCAATCCAATGCTTTGGCATCTT...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGGTAGGGCACTAATTTaGGGCAGAAAGCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKGRALI*GRKLLQ Trigger: CTGAAGAAGCTTTCTGCCCCAAATTAGTGCCCTACC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| 3UTR CAA 72 bp | AGAAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTaGAATTACAGTACTGCAAGGCACATTCAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: RKLSAAAKENLF*NYSTARHIQRL Trigger: GAGTCTCTGAATGTGCCTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAAAACTAAGCAGCATATaGGAGAGGACTGCAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAKLSSI*ERTARA Trigger: TGCTCTTGCAGTCCTCTCTCATATGCTGCTTAGTTT...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGAAGTCCAGGCGCTTTaGTTGAGAATCAGCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKEVQAL*LRISLI Trigger: GATTAAGCTGATTCTCAATCAAAGCGCCTGGACTTC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGGCTTATGTGAGGACTaGACTCGCAAGATCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKGLCED*TRKIFS Trigger: AGAAAAGATCTTGCGAGTTCAGTCCTCACATAAGCC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGCTGCCTAATACTCTTTaGTTCACAACTGAGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKLPNTL*FTTESQ Trigger: CTGCGACTCAGTTGTGAATCAAAGAGTATTAGGCAG...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS-3UTR CCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAAGGCTCATAGAGATCTaGGAATCCGGAGTAATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTARLIEI*ESGVMV Trigger: TACCATTACTCCGGATTCCCAGATCTCTATGAGCCT...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAAAGACTCTGTACCTGTaGTGTTTCTGGCATAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAKTLYL*CFWHKS Trigger: ACTCTTATGCCAGAAACATCACAGGTACAGAGTCTT...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGACAATCACATGGAATaGCTCAGGAGAATGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKDNHME*LRRMLK Trigger: TTTCAGCATTCTCCTGAGGCATTCCATGTGATTGTC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAAGGAAAGTCCTTTACTaGCTCCAGAATAGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTARKVLY*LQNRLI Trigger: TATGAGCCTATTCTGGAGGCAGTAAAGGACTTTCCT...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGACAAAGGCAGCTGTTaGTGGATTATAAACTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKDKGSC*WIINYW Trigger: CCAGTAGTTTATAATCCAGCAACAGCTGCCTTTGTC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGAACGAAGCTGTATCTTaGAAAGACAGGTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKNEAVS*KDRSST Trigger: TGTGGAAGACCTGTCTTTCCAAGATACAGCTTCGTT...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGTGGATTATAAACTACTaGCTCTTCTTCTGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKWIINY*LFFWVS Trigger: GCTGACCCAGAAGAAGAGCCAGTAGTTTATAATCCA...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAAAAGGCAGCTGTTGCTaGATTATAAACTACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAKGSCC*IINYWL Trigger: GAGCCAGTAGTTTATAATCCAGCAACAGCTGCCTTT...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAAAAATAGTAAACTTCTaGACAGCTGCCAGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAKIVNF*TAASPF Trigger: GAAAGGACTGGCAGCTGTTCAGAAGTTTACTATTTT...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGTGTGGAAGAGATGCTTaGAAAAACTTCTTGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKCGRDA*KNFLQR Trigger: TCTCTGCAAGAAGTTTTTGCAAGCATCTCTTCCACA...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCATCTAGACAAGCAAGATaGCAAAGCATTGGATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTASRQAR*QSIGLR Trigger: TCTCAATCCAATGCTTTGGCATCTTGCTTGTCTAGA...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGACTGATGAGAATCTTTaGAGATTCTTCAGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKTDENL*RFFRDR Trigger: TCTGTCCCTGAAGAATCTGCAAAGATTCTCATCAGT...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CCA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGCAAAGGATGCATCTGTaGAAGAGATGCTTGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTFRRSQREPIFELQYCKQRMHL*KRCLQK Trigger: TTTTTGCAAGCATCTCTTCCACAGATGCATCCTTTG...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR TCA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCATTGGAAACCTACTTGTaGTTTTCTGAACTGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GMPFPLNTCGQTCLTVTALETYL*FSELTE Trigger: TTCAGTCAGTTCAGAAAATCACAAGTAGGTTTCCAA...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 90 bp | CCTGGTGGCCCACTTGTCGCTGGAAAGGGTCCTGGCCCTCCAGGATaGGGCGGGTCGTCAGGTCAAACATGGCCTCGCACTGCGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PGGPLVAGKGPGPPG*GGSSGQTWPRTAPR Trigger: ACGAGGCGCAGTGCGAGGCCATGTTTGACCTGACGACCCGCCTCATCCTGGAGGGCCAGGACCCTTTCCAGCGACAAGTGGGCCACCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 90 bp | CCCTCCAGGATGAGGCGGGTCGTCAGGTCAAACATGGCCTCGCACTaGGCCTCGTCGAGCCAATGCTCCGCGAACTCCACCACCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSRMRRVVRSNMASH*ASSSQCSANSTTFR Trigger: GCGGAAGGTGGTGGAGTTCGCGGAGCATTGGCTCGACGAGGCGCAGTGCGAGGCCATGTTTGACCTGACGACCCGCCTCATCCTGGAGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 90 bp | CTGCACGAAATCGGTCAGGAGGTCGCTCAGCCGGGCACAGAGCACTaGCTCCGGCCTCTCGCAAACCATTCGCAGGACCTCCACCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHEIGQEVAQPGTEH*LRPLANHSQDLHLE Trigger: CTCCAGGTGGAGGTCCTGCGAATGGTTTGCGAGAGGCCGGAGCCAGTGCTCTGTGCCCGGCTGAGCGACCTCCTGACCGATTTCGTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 90 bp | GCCAATGCTCCGCGAACTCCACCACCTTCCGCACAATCATCCGCTTaGGGGGCAGCGGGTGCGAGGAGCTCACCAGGCCTTCCAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: ANAPRTPPPSAQSSA*GAAGARSSPGLPES Trigger: AGATTCTGGAAGGCCTGGTGAGCTCCTCGCACCCGCTGCCCCTCAAGCGGATGATTGTGCGGAAGGTGGTGGAGTTCGCGGAGCATTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 90 bp | GTCGTCAGGTCAAACATGGCCTCGCACTGCGCCTCGTCGAGCCAATaGTCCGCGAACTCCACCACCTTCCGCACAATCATCCGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VVRSNMASHCASSSQ*SANSTTFRTIIRLR Trigger: CCTCAAGCGGATGATTGTGCGGAAGGTGGTGGAGTTCGCGGAGCATTGGCTCGACGAGGCGCAGTGCGAGGCCATGTTTGACCTGACGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 90 bp | AGCACTGGCTCCGGCCTCTCGCAAACCATTCGCAGGACCTCCACCTaGAGCAGGCTGAAGAGATCCAGCACCGACGGGCAGCTCATAATC | + |
|
Preference number: 5 (lower is better) Translates to: STGSGLSQTIRRTST*SRLKRSSTDGQLII Trigger: GATTATGAGCTGCCCGTCGGTGCTGGATCTCTTCAGCCTGCTCCAGGTGGAGGTCCTGCGAATGGTTTGCGAGAGGCCGGAGCCAGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 90 bp | CTGAGTGGTAGCCCTGCTGAAGGAGGCCCAACACGAAAGTCTTGTTaGAGAAGGACTCGAACTCCGGCCGGTGGTACCGCGCGTAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSGSPAEGGPTRKSC*RRTRTPAGGTARRP Trigger: AGGCCTACGCGCGGTACCACCGGCCGGAGTTCGAGTCCTTCTTCAACAAGACTTTCGTGTTGGGCCTCCTTCAGCAGGGCTACCACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 90 bp | CAGTTGGCCCACAGCTTCCTGGTGGGTCATTGTCATCAAATCCATTaGGTCGGAACGAACAGGAAGCAGATGCAGCTTGCAGGGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLAHSFLVGHCHQIH*VGTNRKQMQLAGPG Trigger: CCCGGGCCCTGCAAGCTGCATCTGCTTCCTGTTCGTTCCGACCCAATGGATTTGATGACAATGACCCACCAGGAAGCTGTGGGCCAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 90 bp | ATTGAAGCCTCCTCCACCGCCCCCACCAGTTGGCCCACAGCTTCCTaGTGGGTCATTGTCATCAAATCCATTGGGTCGGAACGAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IEASSTAPTSWPTAS*WVIVIKSIGSERTG Trigger: TCCTGTTCGTTCCGACCCAATGGATTTGATGACAATGACCCACCAGGAAGCTGTGGGCCAACTGGTGGGGGCGGTGGAGGAGGCTTCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS CCA 90 bp | GAGTCTGCCAACTGTATTGAAGCCTCCTCCACCGCCCCCACCAGTTaGCCCACAGCTTCCTGGTGGGTCATTGTCATCAAATCCATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESANCIEASSTAPTS*PTASWWVIVIKSIG Trigger: CCCAATGGATTTGATGACAATGACCCACCAGGAAGCTGTGGGCCAACTGGTGGGGGCGGTGGAGGAGGCTTCAATACAGTTGGCAGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 90 bp | GCCGTTGTGAATGTAGTCCAGGATGGCGACGTCCTTCCTGTCCACTaGGTGGTAGCCCTGCTGAAGGAGGCCCAACACGAAAGTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVVNVVQDGDVLPVH*VVALLKEAQHESLV Trigger: AACAAGACTTTCGTGTTGGGCCTCCTTCAGCAGGGCTACCACTCAGTGGACAGGAAGGACGTCGCCATCCTGGACTACATTCACAACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS GCA 90 bp | ACATTTGGGTCGGTGGTTAGGCTCCTGATGAGGACTGTGATCATCTaGAGAGGAATATGCTGCACCAGGCTTGCCAAGGCAACCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TFGSVVRLLMRTVII*RGICCTRLAKATEG Trigger: GCCCTCGGTTGCCTTGGCAAGCCTGGTGCAGCATATTCCTCTGCAGATGATCACAGTCCTCATCAGGAGCCTAACCACCGACCCAAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS GCA 90 bp | GTGGTTAGGCTCCTGATGAGGACTGTGATCATCTGCAGAGGAATATaGTGCACCAGGCTTGCCAAGGCAACCGAGGGCTCAAAGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: VVRLLMRTVIICRGI*CTRLAKATEGSKDA Trigger: TGCATCCTTTGAGCCCTCGGTTGCCTTGGCAAGCCTGGTGCAGCATATTCCTCTGCAGATGATCACAGTCCTCATCAGGAGCCTAACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS-3UTR CAA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCCCCAACACGAAAGTCTaGTTGAAGAAGGACTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLVPESGVQRRGQRRQQPPNTKV*LKKDSN Trigger: GTTCGAGTCCTTCTTCAACAAGACTTTCGTGTTGGG...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS-3UTR CAA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCAACACGAAAGTCTTGTaGAAGAAGGACTCGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLVPESGVQRRGQRRQQPNTKVL*KKDSNS Trigger: GGAGTTCGAGTCCTTCTTCAACAAGACTTTCGTGTT...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS-3UTR CAA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCACAGCTTGTTGTCCTTaGTTATGGCATCCATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLVPESGVQRRGQRRQQPTACCP*LWHPSA Trigger: AGCTGATGGATGCCATAACAAAGGACAACAAGCTGT...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS CCA 90 bp | CACTGTCACCTGTACCAGGAGACTCTGTGGGCACTGCTACCTTACTaGTCACCTCTTGTAAACAAGTTTCAGCACAGTCCAGACCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HCHLYQETLWALLPY*SPLVNKFQHSPDLP Trigger: CGGAAGGTCTGGACTGTGCTGAAACTTGTTTACAAGAGGTGACCAGTAAGGTAGCAGTGCCCACAGAGTCTCCTGGTACAGGTGACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCTGCAAATACAGCTTGTaGTCCTTTGTTATGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TLVPESGVQRRGQRRQQPCKYSL*SFVMAS Trigger: GGATGCCATAACAAAGGACAACAAGCTGTATTTGCA...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAGGAAGCAGATGCAGCTaGCAGGGCCCGGGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GMPFPLNTCGQTCLTVTAGSRCS*QGPGSS Trigger: GCTCGAGCCCGGGCCCTGCAAGCTGCATCTGCTTCC...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGCACCGCCCCCACCAGTaGGCCCACAGCTTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKHRPHQ*AHSFLV Trigger: CACCAGGAAGCTGTGGGCCAACTGGTGGGGGCGGTG...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 90 bp | CTGGAAATGACCTATCGTTCGAACCAGCTGTTGACAGAAGGTAACTaGCAGTTTCCCTTTGGGGACGCACTGCACGAAATCGGTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEMTYRSNQLLTEGN*QFPFGDALHEIGQE Trigger: CTCCTGACCGATTTCGTGCAGTGCGTCCCCAAAGGGAAACTGTCAGTTACCTTCTGTCAACAGCTGGTTCGAACGATAGGTCATTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 90 bp | TCATCAAATCCATTGGGTCGGAACGAACAGGAAGCAGATGCAGCTTaGAGGGCCCGGGCTCGAGCATTCAATTCTTGTTCCTGCAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SSNPLGRNEQEADAA*RARARAFNSCSCKY Trigger: GTATTTGCAGGAACAAGAATTGAATGCTCGAGCCCGGGCCCTGCAAGCTGCATCTGCTTCCTGTTCGTTCCGACCCAATGGATTTGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 90 bp | CTTTCGTTACCTGGGAGACATACTCCCGTAGTTCCTTCTCCTGAGTaGACACGCACTGGAAATGACCTATCGTTCGAACCAGCTGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLPGRHTPVVPSPE*TRTGNDLSFEPAVD Trigger: GTCAACAGCTGGTTCGAACGATAGGTCATTTCCAGTGCGTGTCCACTCAGGAGAAGGAACTACGGGAGTATGTCTCCCAGGTAACGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGCACCTGGTGGCCCACTaGTCGCTGGAAAGGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKHLVAH*SLERVL Trigger: CAGGACCCTTTCCAGCGACAAGTGGGCCACCAGGTG...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | ACACTTGTTCCTGAATCTGGAGTGCAACGCCGAGGACAGCGGAGACAGCAGCCCAGAGGCAGTGACACATaGTCTAAAATTTTTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLVPESGVQRRGQRRQQPRGSDT*SKIFLL Trigger: GAGAAGAAAAATTTTAGACAATGTGTCACTGCCTCT...GGGCTGCTGTCTCCGCTGTCCTCGGCGTTGCACTCCAGATTCAGGAACAAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 90 bp | GGCTCAAAGGATGCATCTGTGGAAGAGATGCTTGCAAAAACTTCTTaGAGAGAAGGTAGCAGCGTGGAGGGCTCAGCCTTCCAAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: GSKDASVEEMLAKTS*REGSSVEGSAFQIF Trigger: GAATATTTGGAAGGCTGAGCCCTCCACGCTGCTACCTTCTCTGCAAGAAGTTTTTGCAAGCATCTCTTCCACAGATGCATCCTTTGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS CCA 90 bp | CCTAGTAAACAACTCTGGGAGGGTGCTAATGCCAGACTTTCAGACTaGGGGCACATCTGGTATGAAGACTCTGTACCTGTGATGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSKQLWEGANARLSD*GHIWYEDSVPVMFL Trigger: CAGAAACATCACAGGTACAGAGTCTTCATACCAGATGTGCCCCCAGTCTGAAAGTCTGGCATTAGCACCCTCCCAGAGTTGTTTACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS TCA 90 bp | GACTTTCAGACTGGGGGCACATCTGGTATGAAGACTCTGTACCTGTaGTGTTTCTGGCATAAGAGTAGTAATGGCCACTCTCAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: DFQTGGTSGMKTLYL*CFWHKSSNGHSQRT Trigger: TGTCCTCTGAGAGTGGCCATTACTACTCTTATGCCAGAAACATCACAGGTACAGAGTCTTCATACCAGATGTGCCCCCAGTCTGAAAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS GCA 90 bp | CAGGGACAGAAGAGCTTTCAGCACAGTGAAACTCAACAGGAGGACTaGCTAATACTCTTTGATTCACAACTGAGTCGCAGACAAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QGQKSFQHSETQQED*LILFDSQLSRRQRQ Trigger: CTGCCTTTGTCTGCGACTCAGTTGTGAATCAAAGAGTATTAGGCAGTCCTCCTGTTGAGTTTCACTGTGCTGAAAGCTCTTCTGTCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS CCA 90 bp | TTGCTGGATTATAAACTACTGGCTCTTCTTCTGGGTCAGCGACACTaGTTTGCATTAGCCCATCATCTTGAGCACTGGGTAACGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLDYKLLALLLGQRH*FALAHHLEHWVTKL Trigger: CAGCTTCGTTACCCAGTGCTCAAGATGATGGGCTAATGCAAACCAGTGTCGCTGACCCAGAAGAAGAGCCAGTAGTTTATAATCCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS-3UTR CAA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAAGTCTGCCAACTGTATaGAAGCCTCCTCCACCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GMPFPLNTCGQTCLTVTASLPTV*KPPPPP Trigger: GGGCGGTGGAGGAGGCTTCAATACAGTTGGCAGACT...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 90 bp | TCTCTATTAGAGTCTTCTCACTGTCACCTGTACCAGGAGACTCTGTaGGCACTGCTACCTTACTGGTCACCTCTTGTAAACAAGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLESSHCHLYQETL*ALLPYWSPLVNKFQ Trigger: CTGAAACTTGTTTACAAGAGGTGACCAGTAAGGTAGCAGTGCCCACAGAGTCTCCTGGTACAGGTGACAGTGAGAAGACTCTAATAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS TCA 90 bp | GCTTCAACTTTGTGTGAGGTACTCCCACAGTTTAGGCAGCAGATGTaGGTCCGTAGCTTCCCTCCAAACATTTTCTCTATTAGAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASTLCEVLPQFRQQM*VRSFPPNIFSIRVF Trigger: GAAGACTCTAATAGAGAAAATGTTTGGAGGGAAGCTACGGACTCACATCTGCTGCCTAAACTGTGGGAGTACCTCACACAAAGTTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 90 bp | TGGAAGAGATGCTTGCAAAAACTTCTTGCAGAGAAGGTAGCAGCGTaGAGGGCTCAGCCTTCCAAATATTCTGTAGTAAGGTACTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: WKRCLQKLLAEKVAA*RAQPSKYSVVRYSL Trigger: AAGTGAGTACCTTACTACAGAATATTTGGAAGGCTGAGCCCTCCACGCTGCTACCTTCTCTGCAAGAAGTTTTTGCAAGCATCTCTTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 90 bp | CTTAGGAAAGTCCTTTACTGCCTCCAGAATAGGCTCATAGAGATCTaGGAATCCGGAGTAATGGTACATCATACAGTGAACCAACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRKVLYCLQNRLIEI*ESGVMVHHTVNQLC Trigger: ACAGAGTTGGTTCACTGTATGATGTACCATTACTCCGGATTCCCAGATCTCTATGAGCCTATTCTGGAGGCAGTAAAGGACTTTCCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGTCGCATCTTTTACATTaGGGTCGGTGGTTAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKSHLLH*GRWLGS Trigger: GGAGCCTAACCACCGACCCAAATGTAAAAGATGCGA...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGTGCCAAAGCATTGGATaGAGAAGTCCAGGCGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKCQSIG*RSPGAL Trigger: CAAAGCGCCTGGACTTCTCAATCCAATGCTTTGGCA...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGGTGAAGGCTTCAACTTaGTGTGAGGTACTCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKVKAST*CEVLPQ Trigger: CTGTGGGAGTACCTCACACAAAGTTGAAGCCTTCAC...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCAAGGCTCCTCCGTGATTaGCATAGTTTTCTCTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GMPFPLNTCGQTCLTVTARLLRD*HSFLCV Trigger: AACGCAGAGAAAACTATGCAAATCACGGAGGAGCCT...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCACTTCCTGGTGGGTCATaGTCATCAAATCCATTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GMPFPLNTCGQTCLTVTALPGGS*SSNPLG Trigger: ACCCAATGGATTTGATGACAATGACCCACCAGGAAG...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 90 bp | TTTAGTAAGTCAGTCACTGAAGTTGTGCTTTCACCTCCTGGGTTCTaGGGTACATCTTTACTGATGAGAATCTTTGCAGATTCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSKSVTEVVLSPPGF*GTSLLMRIFADSSG Trigger: CCCTGAAGAATCTGCAAAGATTCTCATCAGTAAAGATGTACCTCAGAACCCAGGAGGTGAAAGCACAACTTCAGTGACTGACTTACTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | GGTATGCCTTTTCCTCTAAATACTTGTGGCCAAACATGTCTAACTGTAACTGCACTGTGGAAGAGATGCTaGCAAAAACTTCTTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GMPFPLNTCGQTCLTVTALWKRC*QKLLAE Trigger: CTCTGCAAGAAGTTTTTGCAAGCATCTCTTCCACAG...TGCAGTTACAGTTAGACATGTTTGGCCACAAGTATTTAGAGGAAAAGGCATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGTTGTCATCAAATCCATaGGGTCGGAACGAACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKLSSNP*GRNEQE Trigger: TTCCTGTTCGTTCCGACCCAATGGATTTGATGACAA...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGAGAAGTCCAGGCGCTTaGATTGAGAATCAGCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKRSPGA*IENQLN Trigger: ATTAAGCTGATTCTCAATCAAAGCGCCTGGACTTCT...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGAGACAAAGGCAGCTGTaGCTGGATTATAAACTACTG | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKRQRQL*LDYKLL Trigger: CAGTAGTTTATAATCCAGCAACAGCTGCCTTTGTCT...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGTCCTGCAAATACAGCTaGTTGTCCTTTGTTATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKSCKYS*LSFVMA Trigger: TGCCATAACAAAGGACAACAAGCTGTATTTGCAGGA...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 90 bp | TTTCAGCAAAGTAACATCTATCAAAATAGTAAACTTCTGAACAGCTaGCAGTCCTTTCAGGAGAGCAATTACCCACGTATCTACATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FQQSNIYQNSKLLNS*QSFQESNYPRIYML Trigger: CAGCATGTAGATACGTGGGTAATTGCTCTCCTGAAAGGACTGGCAGCTGTTCAGAAGTTTACTATTTTGATAGATGTTACTTTGCTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS-3UTR CAA 90 bp | AAAACTTTCCGCCGCAGCCAAAGAGAACCTATTTTTGAATTACAGTACTGCAAGTCGAGCATTCAATTCTaGTTCCTGCAAATACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTFRRSQREPIFELQYCKSSIQF*FLQIQL Trigger: AAGCTGTATTTGCAGGAACAAGAATTGAATGCTCGA...CTTGCAGTACTGTAATTCAAAAATAGGTTCTCTTTGGCTGCGGCGGAAAGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 90 bp | AGTTCTATTTTCAGCAAAGTAACATCTATCAAAATAGTAAACTTCTaGACAGCTGCCAGTCCTTTCAGGAGAGCAATTACCCACGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SSIFSKVTSIKIVNF*TAASPFRRAITHVS Trigger: AGATACGTGGGTAATTGCTCTCCTGAAAGGACTGGCAGCTGTTCAGAAGTTTACTATTTTGATAGATGTTACTTTGCTGAAAATAGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 90 bp | CGGCCGGTGGTACCGCGCGTAGGCCTCCAGCACCTGGTGGCCCACTaGTCGCTGGAAAGGGTCCTGGCCCTCCAGGATGAGGCGGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RPVVPRVGLQHLVAH*SLERVLALQDEAGR Trigger: ACGACCCGCCTCATCCTGGAGGGCCAGGACCCTTTCCAGCGACAAGTGGGCCACCAGGTGCTGGAGGCCTACGCGCGGTACCACCGGCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | CCGCGAACTCCACCACCTTCCGCACAATCATCCGCTTaGGGGGCAGCGGGTGCGAGGAGCTCACCAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PRTPPPSAQSSA*GAAGARSSPGL Trigger: AAGGCCTGGTGAGCTCCTCGCACCCGCTGCCCCTCAAGCGGATGATTGTGCGGAAGGTGGTGGAGTTCGCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | ATCGGTCAGGAGGTCGCTCAGCCGGGCACAGAGCACTaGCTCCGGCCTCTCGCAAACCATTCGCAGGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: IGQEVAQPGTEH*LRPLANHSQDL Trigger: GAGGTCCTGCGAATGGTTTGCGAGAGGCCGGAGCCAGTGCTCTGTGCCCGGCTGAGCGACCTCCTGACCGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | TCCGCGAACTCCACCACCTTCCGCACAATCATCCGCTaGAGGGGCAGCGGGTGCGAGGAGCTCACCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SANSTTFRTIIR*RGSGCEELTRP Trigger: AGGCCTGGTGAGCTCCTCGCACCCGCTGCCCCTCAAGCGGATGATTGTGCGGAAGGTGGTGGAGTTCGCGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 72 bp | ATGAGGCGGGTCGTCAGGTCAAACATGGCCTCGCACTaGGCCTCGTCGAGCCAATGCTCCGCGAACTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: MRRVVRSNMASH*ASSSQCSANST Trigger: GGTGGAGTTCGCGGAGCATTGGCTCGACGAGGCGCAGTGCGAGGCCATGTTTGACCTGACGACCCGCCTCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | AGCACCTGGTGGCCCACTTGTCGCTGGAAAGGGTCCTaGCCCTCCAGGATGAGGCGGGTCGTCAGGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: STWWPTCRWKGS*PSRMRRVVRSN Trigger: GTTTGACCTGACGACCCGCCTCATCCTGGAGGGCCAGGACCCTTTCCAGCGACAAGTGGGCCACCAGGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | TCCGGCCTCTCGCAAACCATTCGCAGGACCTCCACCTaGAGCAGGCTGAAGAGATCCAGCACCGACGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGLSQTIRRTST*SRLKRSSTDGQ Trigger: CTGCCCGTCGGTGCTGGATCTCTTCAGCCTGCTCCAGGTGGAGGTCCTGCGAATGGTTTGCGAGAGGCCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 90 bp | AGCCAATGCTCCGCGAACTCCACCACCTTCCGCACAATCATCCGCTaGAGGGGCAGCGGGTGCGAGGAGCTCACCAGGCCTTCCAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: SQCSANSTTFRTIIR*RGSGCEELTRPSRI Trigger: GATTCTGGAAGGCCTGGTGAGCTCCTCGCACCCGCTGCCCCTCAAGCGGATGATTGTGCGGAAGGTGGTGGAGTTCGCGGAGCATTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | CCACTTGTCGCTGGAAAGGGTCCTGGCCCTCCAGGATaGGGCGGGTCGTCAGGTCAAACATGGCCTCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PLVAGKGPGPPG*GGSSGQTWPRT Trigger: AGTGCGAGGCCATGTTTGACCTGACGACCCGCCTCATCCTGGAGGGCCAGGACCCTTTCCAGCGACAAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS GCA 72 bp | ACCTTCCGCACAATCATCCGCTTGAGGGGCAGCGGGTaGGAGGAGCTCACCAGGCCTTCCAGAATCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TFRTIIRLRGSG*EELTRPSRILS Trigger: GGACAAGATTCTGGAAGGCCTGGTGAGCTCCTCGCACCCGCTGCCCCTCAAGCGGATGATTGTGCGGAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS GCA 72 bp | TCAAACATGGCCTCGCACTGCGCCTCGTCGAGCCAATaGTCCGCGAACTCCACCACCTTCCGCACAATCATC | + |
|
Preference number: 6 (lower is better) Translates to: SNMASHCASSSQ*SANSTTFRTII Trigger: GATGATTGTGCGGAAGGTGGTGGAGTTCGCGGAGCATTGGCTCGACGAGGCGCAGTGCGAGGCCATGTTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS CAA 90 bp | CCAGTTGGCCCACAGCTTCCTGGTGGGTCATTGTCATCAAATCCATaGGGTCGGAACGAACAGGAAGCAGATGCAGCTTGCAGGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PVGPQLPGGSLSSNP*GRNEQEADAACRAR Trigger: CCGGGCCCTGCAAGCTGCATCTGCTTCCTGTTCGTTCCGACCCAATGGATTTGATGACAATGACCCACCAGGAAGCTGTGGGCCAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS CAA 90 bp | CCTCCACCGCCCCCACCAGTTGGCCCACAGCTTCCTGGTGGGTCATaGTCATCAAATCCATTGGGTCGGAACGAACAGGAAGCAGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: PPPPPPVGPQLPGGS*SSNPLGRNEQEADA Trigger: TGCATCTGCTTCCTGTTCGTTCCGACCCAATGGATTTGATGACAATGACCCACCAGGAAGCTGTGGGCCAACTGGTGGGGGCGGTGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS GCA 72 bp | CAGAAGGTAACTGACAGTTTCCCTTTGGGGACGCACTaGACGAAATCGGTCAGGAGGTCGCTCAGCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QKVTDSFPLGTH*TKSVRRSLSRA Trigger: TGCCCGGCTGAGCGACCTCCTGACCGATTTCGTGCAGTGCGTCCCCAAAGGGAAACTGTCAGTTACCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
||
| CDS TCA 72 bp | AATGTAGTCCAGGATGGCGACGTCCTTCCTGTCCACTaGGTGGTAGCCCTGCTGAAGGAGGCCCAACACGAA | + |
|
Preference number: 6 (lower is better) Translates to: NVVQDGDVLPVH*VVALLKEAQHE Trigger: TTCGTGTTGGGCCTCCTTCAGCAGGGCTACCACTCAGTGGACAGGAAGGACGTCGCCATCCTGGACTACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 72 bp | CCATTGGGTCGGAACGAACAGGAAGCAGATGCAGCTTaGAGGGCCCGGGCTCGAGCATTCAATTCTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PLGRNEQEADAA*RARARAFNSCS Trigger: GGAACAAGAATTGAATGCTCGAGCCCGGGCCCTGCAAGCTGCATCTGCTTCCTGTTCGTTCCGACCCAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | CAGCAGAAACCTGAGGTACTCAGAGCAGTCCTGTTGTaGCCTGGGAGTAAACCACGGAGGTCTGGAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QQKPEVLRAVLL*PGSKPRRSGSL Trigger: GAGGCTTCCAGACCTCCGTGGTTTACTCCCAGGTCACAACAGGACTGCTCTGAGTACCTCAGGTTTCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 72 bp | CTCCTGATGAGGACTGTGATCATCTGCAGAGGAATATaGTGCACCAGGCTTGCCAAGGCAACCGAGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLMRTVIICRGI*CTRLAKATEGS Trigger: TGAGCCCTCGGTTGCCTTGGCAAGCCTGGTGCAGCATATTCCTCTGCAGATGATCACAGTCCTCATCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | AACTGTATTGAAGCCTCCTCCACCGCCCCCACCAGTTaGCCCACAGCTTCCTGGTGGGTCATTGTCATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: NCIEASSTAPTS*PTASWWVIVIK Trigger: TTTGATGACAATGACCCACCAGGAAGCTGTGGGCCAACTGGTGGGGGCGGTGGAGGAGGCTTCAATACAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | TCCATTGGGTCGGAACGAACAGGAAGCAGATGCAGCTaGCAGGGCCCGGGCTCGAGCATTCAATTCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SIGSERTGSRCS*QGPGSSIQFLF Trigger: GAACAAGAATTGAATGCTCGAGCCCGGGCCCTGCAAGCTGCATCTGCTTCCTGTTCGTTCCGACCCAATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | CCCCCACCAGTTGGCCCACAGCTTCCTGGTGGGTCATaGTCATCAAATCCATTGGGTCGGAACGAACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PPPVGPQLPGGS*SSNPLGRNEQE Trigger: TTCCTGTTCGTTCCGACCCAATGGATTTGATGACAATGACCCACCAGGAAGCTGTGGGCCAACTGGTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | GCATCCATCAGCTCTTTCTGTAGGGGTGGATCTCCATaGGCCCAGACACCACTGGCTGGATTGTCACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ASISSFCRGGSP*AQTPLAGLSLS Trigger: AGACAGTGACAATCCAGCCAGTGGTGTCTGGGCCAATGGAGATCCACCCCTACAGAAAGAGCTGATGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 90 bp | CCAAGGCAACCGAGGGCTCAAAGGATGCATCTGTGGAAGAGATGCTaGCAAAAACTTCTTGCAGAGAAGGTAGCAGCGTGGAGGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRQPRAQRMHLWKRC*QKLLAEKVAAWRAQ Trigger: CTGAGCCCTCCACGCTGCTACCTTCTCTGCAAGAAGTTTTTGCAAGCATCTCTTCCACAGATGCATCCTTTGAGCCCTCGGTTGCCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | CAACTCTGGGAGGGTGCTAATGCCAGACTTTCAGACTaGGGGCACATCTGGTATGAAGACTCTGTACCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLWEGANARLSD*GHIWYEDSVPV Trigger: CACAGGTACAGAGTCTTCATACCAGATGTGCCCCCAGTCTGAAAGTCTGGCATTAGCACCCTCCCAGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | CATCCATCAGCTCTTTCTGTAGGGGTGGATCTCCATTaGCCCAGACACCACTGGCTGGATTGTCACTGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: HPSALSVGVDLH*PRHHWLDCHCL Trigger: TAGACAGTGACAATCCAGCCAGTGGTGTCTGGGCCAATGGAGATCCACCCCTACAGAAAGAGCTGATGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | CCACAGCTTCCTGGTGGGTCATTGTCATCAAATCCATaGGGTCGGAACGAACAGGAAGCAGATGCAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PQLPGGSLSSNP*GRNEQEADAAC Trigger: GCAAGCTGCATCTGCTTCCTGTTCGTTCCGACCCAATGGATTTGATGACAATGACCCACCAGGAAGCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 90 bp | GTCATCAAATCCATTGGGTCGGAACGAACAGGAAGCAGATGCAGCTaGCAGGGCCCGGGCTCGAGCATTCAATTCTTGTTCCTGCAAATA | + |
|
Preference number: 6 (lower is better) Translates to: VIKSIGSERTGSRCS*QGPGSSIQFLFLQI Trigger: TATTTGCAGGAACAAGAATTGAATGCTCGAGCCCGGGCCCTGCAAGCTGCATCTGCTTCCTGTTCGTTCCGACCCAATGGATTTGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | GAGTCTTCTCACTGTCACCTGTACCAGGAGACTCTGTaGGCACTGCTACCTTACTGGTCACCTCTTGTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ESSHCHLYQETL*ALLPYWSPLVN Trigger: GTTTACAAGAGGTGACCAGTAAGGTAGCAGTGCCCACAGAGTCTCCTGGTACAGGTGACAGTGAGAAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | ACTGTATTGGGGCTTTCTACCCCTAGTAAACAACTCTaGGAGGGTGCTAATGCCAGACTTTCAGACTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TVLGLSTPSKQL*EGANARLSDWG Trigger: CCCCCAGTCTGAAAGTCTGGCATTAGCACCCTCCCAGAGTTGTTTACTAGGGGTAGAAAGCCCCAATACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | CACAGCTTCCTGGTGGGTCATTGTCATCAAATCCATTaGGTCGGAACGAACAGGAAGCAGATGCAGCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HSFLVGHCHQIH*VGTNRKQMQLA Trigger: TGCAAGCTGCATCTGCTTCCTGTTCGTTCCGACCCAATGGATTTGATGACAATGACCCACCAGGAAGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | CCGAGGGCTCAAAGGATGCATCTGTGGAAGAGATGCTaGCAAAAACTTCTTGCAGAGAAGGTAGCAGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRAQRMHLWKRC*QKLLAEKVAAW Trigger: CCACGCTGCTACCTTCTCTGCAAGAAGTTTTTGCAAGCATCTCTTCCACAGATGCATCCTTTGAGCCCTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 90 bp | GGAAGCAGATGCAGCTTGCAGGGCCCGGGCTCGAGCATTCAATTCTaGTTCCTGCAAATACAGCTTGTTGTCCTTTGTTATGGCATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSRCSLQGPGSSIQF*FLQIQLVVLCYGIH Trigger: ATGGATGCCATAACAAAGGACAACAAGCTGTATTTGCAGGAACAAGAATTGAATGCTCGAGCCCGGGCCCTGCAAGCTGCATCTGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | ACCTATCGTTCGAACCAGCTGTTGACAGAAGGTAACTaGCAGTTTCCCTTTGGGGACGCACTGCACGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: TYRSNQLLTEGN*QFPFGDALHEI Trigger: GATTTCGTGCAGTGCGTCCCCAAAGGGAAACTGTCAGTTACCTTCTGTCAACAGCTGGTTCGAACGATAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | TCTTTTCTTCTTCATGGAGTCTGTCCAGCAGAAACCTaGGGTACTCAGAGCAGTCCTGTTGTGACCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFLLHGVCPAET*GTQSSPVVTWE Trigger: CTCCCAGGTCACAACAGGACTGCTCTGAGTACCTCAGGTTTCTGCTGGACAGACTCCATGAAGAAGAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | CTGTACCAGGAGACTCTGTGGGCACTGCTACCTTACTaGTCACCTCTTGTAAACAAGTTTCAGCACAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LYQETLWALLPY*SPLVNKFQHSP Trigger: TGGACTGTGCTGAAACTTGTTTACAAGAGGTGACCAGTAAGGTAGCAGTGCCCACAGAGTCTCCTGGTACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | GGTGCTAATGCCAGACTTTCAGACTGGGGGCACATCTaGTATGAAGACTCTGTACCTGTGATGTTTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GANARLSDWGHI*YEDSVPVMFLA Trigger: TGCCAGAAACATCACAGGTACAGAGTCTTCATACCAGATGTGCCCCCAGTCTGAAAGTCTGGCATTAGCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | GGTGGATCTCCATTGGCCCAGACACCACTGGCTGGATaGTCACTGTCTATGCCATTAGCTCTGCTTTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GGSPLAQTPLAG*SLSMPLALLCF Trigger: AAAACAAAGCAGAGCTAATGGCATAGACAGTGACAATCCAGCCAGTGGTGTCTGGGCCAATGGAGATCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 90 bp | TTTGTTATGGCATCCATCAGCTCTTTCTGTAGGGGTGGATCTCCATaGGCCCAGACACCACTGGCTGGATTGTCACTGTCTATGCCATTA | + |
|
Preference number: 6 (lower is better) Translates to: FVMASISSFCRGGSP*AQTPLAGLSLSMPL Trigger: TAATGGCATAGACAGTGACAATCCAGCCAGTGGTGTCTGGGCCAATGGAGATCCACCCCTACAGAAAGAGCTGATGGATGCCATAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | ACTGGGGGCACATCTGGTATGAAGACTCTGTACCTGTaGTGTTTCTGGCATAAGAGTAGTAATGGCCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: TGGTSGMKTLYL*CFWHKSSNGHS Trigger: AGAGTGGCCATTACTACTCTTATGCCAGAAACATCACAGGTACAGAGTCTTCATACCAGATGTGCCCCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 72 bp | AGAATGCTGAAAACTAAGCAGCATATGAGAGAGGACTaGAAGAGCACCAGGTCTCACGAGAGGAAACCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RMLKTKQHMRED*KSTRSHERKPK Trigger: CTTTGGTTTCCTCTCGTGAGACCTGGTGCTCTTGCAGTCCTCTCTCATATGCTGCTTAGTTTTCAGCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | TGCTTGCAAAAACTTCTTGCAGAGAAGGTAGCAGCGTaGAGGGCTCAGCCTTCCAAATATTCTGTAGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CLQKLLAEKVAA*RAQPSKYSVVR Trigger: CCTTACTACAGAATATTTGGAAGGCTGAGCCCTCCACGCTGCTACCTTCTCTGCAAGAAGTTTTTGCAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | TATAAACTACTGGCTCTTCTTCTGGGTCAGCGACACTaGTTTGCATTAGCCCATCATCTTGAGCACTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: YKLLALLLGQRH*FALAHHLEHWV Trigger: TACCCAGTGCTCAAGATGATGGGCTAATGCAAACCAGTGTCGCTGACCCAGAAGAAGAGCCAGTAGTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | CAAAAGGCTAGCGAAAGATCTGTGAAGGCTTCAACTTaGTGTGAGGTACTCCCACAGTTTAGGCAGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: QKASERSVKAST*CEVLPQFRQQM Trigger: CATCTGCTGCCTAAACTGTGGGAGTACCTCACACAAAGTTGAAGCCTTCACAGATCTTTCGCTAGCCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 90 bp | CTAATACTCTTTGATTCACAACTGAGTCGCAGACAAAGGCAGCTGTaGCTGGATTATAAACTACTGGCTCTTCTTCTGGGTCAGCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LILFDSQLSRRQRQL*LDYKLLALLLGQRH Trigger: GTGTCGCTGACCCAGAAGAAGAGCCAGTAGTTTATAATCCAGCAACAGCTGCCTTTGTCTGCGACTCAGTTGTGAATCAAAGAGTATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | AGTTTCAGCACAGTCCAGACCTTCCGAAGGCTTATGTaGGGACTGAACTCGCAAGATCTTTTCTTCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SFSTVQTFRRLM*GLNSQDLFFFM Trigger: CATGAAGAAGAAAAGATCTTGCGAGTTCAGTCCTCACATAAGCCTTCGGAAGGTCTGGACTGTGCTGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | TTGTGTGAGGTACTCCCACAGTTTAGGCAGCAGATGTaGGTCCGTAGCTTCCCTCCAAACATTTTCTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: LCEVLPQFRQQM*VRSFPPNIFSI Trigger: AATAGAGAAAATGTTTGGAGGGAAGCTACGGACTCACATCTGCTGCCTAAACTGTGGGAGTACCTCACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | GTCCTTTACTGCCTCCAGAATAGGCTCATAGAGATCTaGGAATCCGGAGTAATGGTACATCATACAGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VLYCLQNRLIEI*ESGVMVHHTVN Trigger: GTTCACTGTATGATGTACCATTACTCCGGATTCCCAGATCTCTATGAGCCTATTCTGGAGGCAGTAAAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | CTTGTTCCTGCAAATACAGCTTGTTGTCCTTTGTTATaGCATCCATCAGCTCTTTCTGTAGGGGTGGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVPANTACCPLL*HPSALSVGVDL Trigger: GAGATCCACCCCTACAGAAAGAGCTGATGGATGCCATAACAAAGGACAACAAGCTGTATTTGCAGGAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 72 bp | AAGAGCTTTCAGCACAGTGAAACTCAACAGGAGGACTaGCTAATACTCTTTGATTCACAACTGAGTCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KSFQHSETQQED*LILFDSQLSRR Trigger: TCTGCGACTCAGTTGTGAATCAAAGAGTATTAGGCAGTCCTCCTGTTGAGTTTCACTGTGCTGAAAGCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | TTTGATTCACAACTGAGTCGCAGACAAAGGCAGCTGTaGCTGGATTATAAACTACTGGCTCTTCTTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: FDSQLSRRQRQL*LDYKLLALLLG Trigger: ACCCAGAAGAAGAGCCAGTAGTTTATAATCCAGCAACAGCTGCCTTTGTCTGCGACTCAGTTGTGAATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | GAGCCAGAAAGTAGTTTAGTAAGTCAGTCACTGAAGTaGTGCTTTCACCTCCTGGGTTCTGAGGTACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: EPESSLVSQSLK*CFHLLGSEVHL Trigger: AAGATGTACCTCAGAACCCAGGAGGTGAAAGCACAACTTCAGTGACTGACTTACTAAACTACTTTCTGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | TCAGTCACTGAAGTTGTGCTTTCACCTCCTGGGTTCTaGGGTACATCTTTACTGATGAGAATCTTTGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SVTEVVLSPPGF*GTSLLMRIFAD Trigger: ATCTGCAAAGATTCTCATCAGTAAAGATGTACCTCAGAACCCAGGAGGTGAAAGCACAACTTCAGTGACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS GCA 72 bp | CCAGAAAGTAGTTTAGTAAGTCAGTCACTGAAGTTGTaGTTTCACCTCCTGGGTTCTGAGGTACATCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: PESSLVSQSLKL*FHLLGSEVHLY Trigger: GTAAAGATGTACCTCAGAACCCAGGAGGTGAAAGCACAACTTCAGTGACTGACTTACTAAACTACTTTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CCA 72 bp | GCACAACAACAGAACTTAATAGGTAGGGCACTAATTTaGGGCAGAAAGCTTCTTCAGTCCCAGAAGGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: AQQQNLIGRALI*GRKLLQSQKVL Trigger: TAAAACCTTCTGGGACTGAAGAAGCTTTCTGCCCCAAATTAGTGCCCTACCTATTAAGTTCTGTTGTTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | AGATGCCAAAGCATTGGATTGAGAAGTCCAGGCGCTTaGATTGAGAATCAGCTTAATCTTTTCTTCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RCQSIGLRSPGA*IENQLNLFFTG Trigger: CCCAGTGAAGAAAAGATTAAGCTGATTCTCAATCAAAGCGCCTGGACTTCTCAATCCAATGCTTTGGCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 90 bp | AGACAAGCAAGATGCCAAAGCATTGGATTGAGAAGTCCAGGCGCTTaGATTGAGAATCAGCTTAATCTTTTCTTCACTGGGCTTAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RQARCQSIGLRSPGA*IENQLNLFFTGLRK Trigger: TTTCCTAAGCCCAGTGAAGAAAAGATTAAGCTGATTCTCAATCAAAGCGCCTGGACTTCTCAATCCAATGCTTTGGCATCTTGCTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 72 bp | CGAGCATTCAATTCTTGTTCCTGCAAATACAGCTTGTaGTCCTTTGTTATGGCATCCATCAGCTCTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RAFNSCSCKYSL*SFVMASISSFC Trigger: ACAGAAAGAGCTGATGGATGCCATAACAAAGGACAACAAGCTGTATTTGCAGGAACAAGAATTGAATGCTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS CAA 90 bp | AGATTTTCCAGAAAGTCTAGACAAGCAAGATGCCAAAGCATTGGATaGAGAAGTCCAGGCGCTTTGATTGAGAATCAGCTTAATCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RFSRKSRQARCQSIG*RSPGALIENQLNLF Trigger: GAAAAGATTAAGCTGATTCTCAATCAAAGCGCCTGGACTTCTCAATCCAATGCTTTGGCATCTTGCTTGTCTAGACTTTCTGGAAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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| CDS TCA 72 bp | TTCAGCAAAGTAACATCTATCAAAATAGTAAACTTCTaGACAGCTGCCAGTCCTTTCAGGAGAGCAATTACC | + |
|
Preference number: 6 (lower is better) Translates to: FSKVTSIKIVNF*TAASPFRRAIT Trigger: GGTAATTGCTCTCCTGAAAGGACTGGCAGCTGTTCAGAAGTTTACTATTTTGATAGATGTTACTTTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042724.8 |
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