Pregenerated sensors for USP33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025437Ensembl transcript IDs: ENSMUST00000026507.13, ENSMUST00000117492.9, ENSMUST00000123237.8, ENSMUST00000197600.2, ENSMUST00000197748.5
Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATGAAGAAAGCTATCCACCCCTGCGGGGCGTACGCTTCACCACATaGCCCTGCTTTGACTATAGTTGGGTGACTGGAGGAGTGCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: HEESYPPLRGVRFTT*PCFDYSWVTGGVQL Trigger: AAGCTGCACTCCTCCAGTCACCCAACTATAGTCAAAGCAGGGTCATGTGGTGAAGCGTACGCCCCGCAGGGGTGGATAGCTTTCTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
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| 3UTR CCA 90 bp | TTCTCTTTCTGCCAGTCTTTGGCCATCTCCAGGTCATCCTCGTCCTaGATGAGCATGGTGGTCTCATTGCTGTCCTCAGGAAAGCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: FSFCQSLAISRSSSS*MSMVVSLLSSGKPL Trigger: CAAAGGCTTTCCTGAGGACAGCAATGAGACCACCATGCTCATCCAGGACGAGGATGACCTGGAGATGGCCAAAGACTGGCAGAAAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR GCA 90 bp | CCTCAGGAAAGCCTTTGGAGCCACTCTCATTTTCTGCTTTCTCGCTaGTGCTACAAGACTCGCACGACTGAAAATCCACATCTGACTGGC | + |
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Preference number: 1 (lower is better) Translates to: PQESLWSHSHFLLSR*CYKTRTTENPHLTG Trigger: GCCAGTCAGATGTGGATTTTCAGTCGTGCGAGTCTTGTAGCAGCAGCGAGAAAGCAGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR TCA 90 bp | TCAAACCTGCGCTGTCCAGCTTATCCAGCAAGCACTGCTATCCTCTaGCCCACCTCTCTGCCCATGTTTCATGTCTGTATACAGCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: SNLRCPAYPASTAIL*PTSLPMFHVCIQQV Trigger: TACTTGCTGTATACAGACATGAAACATGGGCAGAGAGGTGGGTCAGAGGATAGCAGTGCTTGCTGGATAAGCTGGACAGCGCAGGTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR GCA 90 bp | CAGGAAAGCCTTTGGAGCCACTCTCATTTTCTGCTTTCTCGCTGCTaGTACAAGACTCGCACGACTGAAAATCCACATCTGACTGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: QESLWSHSHFLLSRC*YKTRTTENPHLTGS Trigger: AGAGCCAGTCAGATGTGGATTTTCAGTCGTGCGAGTCTTGTAGCAGCAGCGAGAAAGCAGAAAATGAGAGTGGCTCCAAAGGCTTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR GCA 90 bp | CTCATTGCTGTCCTCAGGAAAGCCTTTGGAGCCACTCTCATTTTCTaGTTTCTCGCTGCTGCTACAAGACTCGCACGACTGAAAATCCAC | + |
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Preference number: 1 (lower is better) Translates to: LIAVLRKAFGATLIF*FLAAATRLARLKIH Trigger: GTGGATTTTCAGTCGTGCGAGTCTTGTAGCAGCAGCGAGAAAGCAGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGGACAGCAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR GCA 90 bp | ATTCTTGGGATCAAACCTGCGCTGTCCAGCTTATCCAGCAAGCACTaGTATCCTCTGACCCACCTCTCTGCCCATGTTTCATGTCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: ILGIKPALSSLSSKH*YPLTHLSAHVSCLY Trigger: ATACAGACATGAAACATGGGCAGAGAGGTGGGTCAGAGGATAGCAGTGCTTGCTGGATAAGCTGGACAGCGCAGGTTTGATCCCAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR GCA 90 bp | ACAACAAACCTCTTCACATACTCCATGAAGAAAGCTATCCACCCCTaGGGGGCGTACGCTTCACCACATGACCCTGCTTTGACTATAGTT | + |
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Preference number: 1 (lower is better) Translates to: TTNLFTYSMKKAIHP*GAYASPHDPALTIV Trigger: AACTATAGTCAAAGCAGGGTCATGTGGTGAAGCGTACGCCCCGCAGGGGTGGATAGCTTTCTTCATGGAGTATGTGAAGAGGTTTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
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| 3UTR CCA 90 bp | ATAGATTCTGAGGCTCTGCCGTGTATCTGCACTTTGACGGTCTCCTaGCTGTTTAGGTCAACTGTTTCACACACTGTGTCCCTGTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: IDSEALPCICTLTVS*LFRSTVSHTVSLSL Trigger: CAAAGACAGGGACACAGTGTGTGAAACAGTTGACCTAAACAGCCAGGAGACCGTCAAAGTGCAGATACACGGCAGAGCCTCAGAATCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR GCA 90 bp | TTCAGATGGACATCAGTGATAGATTCTGAGGCTCTGCCGTGTATCTaGACTTTGACGGTCTCCTGGCTGTTTAGGTCAACTGTTTCACAC | + |
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Preference number: 1 (lower is better) Translates to: FRWTSVIDSEALPCI*TLTVSWLFRSTVSH Trigger: GTGTGAAACAGTTGACCTAAACAGCCAGGAGACCGTCAAAGTGCAGATACACGGCAGAGCCTCAGAATCTATCACTGATGTCCATCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR CCA 90 bp | ATTATGCAACACGAAAAAGGTCTGCTTCTTAGCGTGTGTACTGTGTaGCATCATTTACATGGCACCCTGGGGACAGGGAAACCATCAGGA | + |
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Preference number: 1 (lower is better) Translates to: IMQHEKGLLLSVCTV*HHLHGTLGTGKPSG Trigger: TCCTGATGGTTTCCCTGTCCCCAGGGTGCCATGTAAATGATGCCACACAGTACACACGCTAAGAAGCAGACCTTTTTCGTGTTGCATAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR TCA 90 bp | GTGATCTCATGTCCTCTTTTAACCTCTGTGTGCCCCAGGAACACGTaGTGCACATACATACATACATGCAGGCCAGATACTCATATGCAA | + |
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Preference number: 1 (lower is better) Translates to: VISCPLLTSVCPRNT*CTYIHTCRPDTHMQ Trigger: TTGCATATGAGTATCTGGCCTGCATGTATGTATGTATGTGCATCACGTGTTCCTGGGGCACACAGAGGTTAAAAGAGGACATGAGATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR CCA 90 bp | CTTTCATTTGAAGGAAGGATCTGTGACGTAGCTAGGTCATTCAGATaGACATCAGTGATAGATTCTGAGGCTCTGCCGTGTATCTGCACT | + |
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Preference number: 1 (lower is better) Translates to: LSFEGRICDVARSFR*TSVIDSEALPCICT Trigger: AGTGCAGATACACGGCAGAGCCTCAGAATCTATCACTGATGTCCATCTGAATGACCTAGCTACGTCACAGATCCTTCCTTCAAATGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR GCA 90 bp | TTCACACACTGTGTCCCTGTCTTTGTCCAGTTCTACATCGGCATTTaGCTTGTTGATCTTATTGCACACCTTCTCTTTCTGCCAGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: FTHCVPVFVQFYIGI*LVDLIAHLLFLPVF Trigger: AAAGACTGGCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGATGTAGAACTGGACAAAGACAGGGACACAGTGTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAGAGATGCCACAATGGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCTAAGGTCATCCTCGTCCTaGATGAGCATGGTGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: AGEMPQWLRALAALPEDLRSSSS*MSMVVS Trigger: TGAGACCACCATGCTCATCCAGGACGAGGATGACCT...TAGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCATTGTGGCATCTCTCCAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACTGGCTGCTCTTCCAGAGGACCTAGGTTCAATTCCCAGCATCCACATGGCCTGAAAATCCACATCTaGCTGGCTCTTCTCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: STGCSSRGPRFNSQHPHGLKIHI*LALLFL Trigger: GAGGAAGAGAAGAGCCAGTCAGATGTGGATTTTCAG...GCCATGTGGATGCTGGGAATTGAACCTAGGTCCTCTGGAAGAGCAGCCAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACTGGCTGCTCTTCCAGAGGACCTAGGTTCAATTCCCAGCATCCACATGGCATGAATTCAGAAGGCTaGGAAGGCTCAGCAGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: STGCSSRGPRFNSQHPHGMNSEG*EGSAVR Trigger: CCTAACTGCTGAGCCTTCCCAGCCTTCTGAATTCAT...GCCATGTGGATGCTGGGAATTGAACCTAGGTCCTCTGGAAGAGCAGCCAGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGCATCATTTACATGGCACCCTGGGGACAGGGAAACCATCAGGAGTAGCCCTCAGGAAAGCCTTTaGAGCCACTCTCATTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: CVASFTWHPGDRETIRSSPQESL*SHSHFL Trigger: CAGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGG...GCTACTCCTGATGGTTTCCCTGTCCCCAGGGTGCCATGTAAATGATGCCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR CAA 90 bp | TTTGCCTTGTTGATCTTATTGCACACCTTCTCTTTCTGCCAGTCTTaGGCCATCTCCAGGTCATCCTCGTCCTGGATGAGCATGGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: FALLILLHTFSFCQS*AISRSSSSWMSMVV Trigger: GACCACCATGCTCATCCAGGACGAGGATGACCTGGAGATGGCCAAAGACTGGCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCCCTTAATCCCCTATTTAGACCATACTGTCCTTGGACTGAGCTCCACACAGTCCTTCAGCTCCTCATaGAGCAGGTCCATTAGACAG | + |
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Preference number: 2 (lower is better) Translates to: WPLIPYLDHTVLGLSSTQSFSSS*SRSIRQ Trigger: CTGTCTAATGGACCTGCTTCATGAGGAGCTGAAGGA...CTGTGTGGAGCTCAGTCCAAGGACAGTATGGTCTAAATAGGGGATTAAGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR GCA 90 bp | CACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCATGTCCCTCAGTCACCTaGATGTTTGTAGTTGCATAT | + |
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Preference number: 2 (lower is better) Translates to: HKLRFLQPSLPGTGRQMPCPSVT*MFVVAY Trigger: ATATGCAACTACAAACATGCAGGTGACTGAGGGACA...TGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
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| 3UTR CAA 90 bp | CACACTGTGTCCCTGTCTTTGTCCAGTTCTACATCGGCATTTGCCTaGTTGATCTTATTGCACACCTTCTCTTTCTGCCAGTCTTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HTVSLSLSSSTSAFA*LILLHTFSFCQSLA Trigger: GGCCAAAGACTGGCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGATGTAGAACTGGACAAAGACAGGGACACAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR CAA 90 bp | ACTGTGTCCCTGTCTTTGTCCAGTTCTACATCGGCATTTGCCTTGTaGATCTTATTGCACACCTTCTCTTTCTGCCAGTCTTTGGCCATC | + |
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Preference number: 2 (lower is better) Translates to: TVSLSLSSSTSAFAL*ILLHTFSFCQSLAI Trigger: GATGGCCAAAGACTGGCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGATGTAGAACTGGACAAAGACAGGGACACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR GCA 90 bp | CACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCATGCAGTTTTATATGCTaGAGTGCAAAAGCAGTAACA | + |
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Preference number: 2 (lower is better) Translates to: HKLRFLQPSLPGTGRQMPCSFIC*SAKAVT Trigger: TGTTACTGCTTTTGCACTGCAGCATATAAAACTGCA...TGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
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| 3UTR CAA 90 bp | TCCTGGCTGTTTAGGTCAACTGTTTCACACACTGTGTCCCTGTCTTaGTCCAGTTCTACATCGGCATTTGCCTTGTTGATCTTATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: SWLFRSTVSHTVSLS*SSSTSAFALLILLH Trigger: GTGCAATAAGATCAACAAGGCAAATGCCGATGTAGAACTGGACAAAGACAGGGACACAGTGTGTGAAACAGTTGACCTAAACAGCCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR CAA 90 bp | CTGCTGAGAATAACCTCGAAAAGTTGGATTTACAGTTTTAATTCCTaGGAACAGATTAGCCGGCACAACAGATCCTGGCCTGCTCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLRITSKSWIYSFNS*EQISRHNRSWPALV Trigger: CACAAGAGCAGGCCAGGATCTGTTGTGCCGGCTAATCTGTTCCAAGGAATTAAAACTGTAAATCCAACTTTTCGAGGTTATTCTCAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCCCTTAATCCCCTATTTAGACCATACTGTCCTTGGACTGAGCTCCACACAGACATACATACATACATaGAGGCCAGATACTCATATG | + |
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Preference number: 2 (lower is better) Translates to: WPLIPYLDHTVLGLSSTQTYIHT*RPDTHM Trigger: CATATGAGTATCTGGCCTGCATGTATGTATGTATGT...CTGTGTGGAGCTCAGTCCAAGGACAGTATGGTCTAAATAGGGGATTAAGGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTATAGACACCCTATCGCACGTCAGACACTGTACCGAGCTAATGACTGTTCTGCTTTTTCCTCTTTaGAGATGTAGACTGAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: RVIDTLSHVRHCTELMTVLLFPL*RCRLSF Trigger: AAAGCTCAGTCTACATCTGCAAAGAGGAAAAAGCAG...AACAGTCATTAGCTCGGTACAGTGTCTGACGTGCGATAGGGTGTCTATAACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGCTTTGCGGAATGTTTTaGATGTGTGTGCATCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PKYLQCYKGFAGSACRTKLCGMF*MCVHQV Trigger: CACTTGATGCACACACATTCAAAACATTCCGCAAAG...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTGTATACAGCAAGTATTATCTACTGTAAGAAAACCTTTAAGGCCTCCAGCTTGCCCCAGGAACACGTaGTGCACATACATACATACA | + |
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Preference number: 2 (lower is better) Translates to: VCIQQVLSTVRKPLRPPACPRNT*CTYIHT Trigger: TGTATGTATGTATGTGCATCACGTGTTCCTGGGGCA...AGCTGGAGGCCTTAAAGGTTTTCTTACAGTAGATAATACTTGCTGTATACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTATGCAATTCTAATTGGCCCTTAATCCCCTATTTAGACCATACTGTCCTTATTTACATGGCACCCTaGGGACAGGGAAACCATCAG | + |
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Preference number: 2 (lower is better) Translates to: SLCNSNWPLIPYLDHTVLIYMAP*GQGNHQ Trigger: CTGATGGTTTCCCTGTCCCCAGGGTGCCATGTAAAT...AAGGACAGTATGGTCTAAATAGGGGATTAAGGGCCAATTAGAATTGCATAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTATGCAATTCTAATTGGCCCTTAATCCCCTATTTAGACCATACTGTCCTTCAGACACAGCAACCATaGGGGTTTTCAATGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: SLCNSNWPLIPYLDHTVLQTQQP*GFSMLD Trigger: ATCCAGCATTGAAAACCCCCATGGTTGCTGTGTCTG...AAGGACAGTATGGTCTAAATAGGGGATTAAGGGCCAATTAGAATTGCATAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR GCA 90 bp | TTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAATCAAGAGAATCAACATaGTTTGCGGAATGTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: LQCYKGFAGSACRTKVRESREST*FAECFE Trigger: TTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGA...TTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| 3UTR-3UTR TCA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTACTTTGCGGAATGTTTTaGATGTGTGTGCATCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TISFDTFHTSCSQNRSGLLCGMF*MCVHQV Trigger: CACTTGATGCACACACATTCAAAACATTCCGCAAAG...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATCTTTGCGGAATGTTTTaGATGTGTGTGCATCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TDANHHAAILKQFNKRYYLCGMF*MCVHQV Trigger: CACTTGATGCACACACATTCAAAACATTCCGCAAAG...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
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| 3UTR-3UTR GCA 90 bp | GTCTGTATACAGCAAGTATTATCTACTGTAAGAAAACCTTTAAGGCCTCCAGCTCATGGGGGTTTTCAATaGTGGATTACTGGGAATTTT | + |
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Preference number: 2 (lower is better) Translates to: VCIQQVLSTVRKPLRPPAHGGFQ*WITGNF Trigger: AAAATTCCCAGTAATCCAGCATTGAAAACCCCCATG...AGCTGGAGGCCTTAAAGGTTTTCTTACAGTAGATAATACTTGCTGTATACAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTCATGTCTGTATACAGCAAGTATTATCTACTGTAAGAAAACCTTTAAGGCCGGTGGTAATGCAGAATaGTACAGACATTCTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: VSCLYTASIIYCKKTFKAGGNAE*YRHSGR Trigger: TCTTCCAGAATGTCTGTATCATTCTGCATTACCACC...GGCCTTAAAGGTTTTCTTACAGTAGATAATACTTGCTGTATACAGACATGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAATTTTATATGCTGCAGTaGAAAAGCAGTAACACCCAC | + |
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Preference number: 2 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKFYMLQ*KSSNTH Trigger: GTGGGTGTTACTGCTTTTGCACTGCAGCATATAAAA...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATACATTCCATACTTCATaGTCTCAAAATAGAAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: TDANHHAAILKQFNKRYYTFHTS*SQNRSG Trigger: GCCACTTCTATTTTGAGAGCATGAAGTATGGAATGT...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
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| 3UTR-3UTR GCA 90 bp | ATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTTGCAGTTTTATATGCTaGAGTGCAAAAGCAGTAACA | + |
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Preference number: 2 (lower is better) Translates to: IVELLTSHDQANSSEYSICSFIC*SAKAVT Trigger: TGTTACTGCTTTTGCACTGCAGCATATAAAACTGCA...AATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| 3UTR-3UTR GCA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTTCAAGAGAATCAACATaGTTTGCGGAATGTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: VIRTLSKPKYLQCYKGFASREST*FAECFE Trigger: TTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGA...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTATATGCAGTTTTATATaGTGCAGTGCAAAAGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: VELLTSHDQANSSEYSIIICSFI*CSAKAV Trigger: TACTGCTTTTGCACTGCAGCATATAAAACTGCATAT...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| 3UTR-3UTR GCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAAATATGCAGTTTTATATaGTGCAGTGCAAAAGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKICSFI*CSAKAV Trigger: TACTGCTTTTGCACTGCAGCATATAAAACTGCATAT...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| 3UTR TCA 72 bp | AGCTATCCACCCCTGCGGGGCGTACGCTTCACCACATaGCCCTGCTTTGACTATAGTTGGGTGACTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: SYPPLRGVRFTT*PCFDYSWVTGG Trigger: TCCTCCAGTCACCCAACTATAGTCAAAGCAGGGTCATGTGGTGAAGCGTACGCCCCGCAGGGGTGGATAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
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| 3UTR CCA 72 bp | TGCCAGTCTTTGGCCATCTCCAGGTCATCCTCGTCCTaGATGAGCATGGTGGTCTCATTGCTGTCCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CQSLAISRSSSS*MSMVVSLLSSG Trigger: TCCTGAGGACAGCAATGAGACCACCATGCTCATCCAGGACGAGGATGACCTGGAGATGGCCAAAGACTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR TCA 72 bp | AGTCTTTGGCCATCTCCAGGTCATCCTCGTCCTGGATaGGCATGGTGGTCTCATTGCTGTCCTCAGGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLWPSPGHPRPG*AWWSHCCPQES Trigger: GCTTTCCTGAGGACAGCAATGAGACCACCATGCTCATCCAGGACGAGGATGACCTGGAGATGGCCAAAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR GCA 72 bp | CTCTTCACATACTCCATGAAGAAAGCTATCCACCCCTaGGGGGCGTACGCTTCACCACATGACCCTGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LFTYSMKKAIHP*GAYASPHDPAL Trigger: CAAAGCAGGGTCATGTGGTGAAGCGTACGCCCCGCAGGGGTGGATAGCTTTCTTCATGGAGTATGTGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGATGCCACAATGGTTAAGAGCACTGGCTaGTCTTCCAGAGGACCTAGGTTCAATTCCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GWRDATMVKSTG*SSRGPRFNSQH Trigger: ATGCTGGGAATTGAACCTAGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCATTGTGGCATCTCTCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR GCA 72 bp | ATCAAACCTGCGCTGTCCAGCTTATCCAGCAAGCACTaGTATCCTCTGACCCACCTCTCTGCCCATGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IKPALSSLSSKH*YPLTHLSAHVS Trigger: TGAAACATGGGCAGAGAGGTGGGTCAGAGGATAGCAGTGCTTGCTGGATAAGCTGGACAGCGCAGGTTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR CCA 72 bp | GCATGGTGGTCTCATTGCTGTCCTCAGGAAAGCCTTTaGAGCCACTCTCATTTTCTGCTTTCTCGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AWWSHCCPQESL*SHSHFLLSRCC Trigger: GCAGCAGCGAGAAAGCAGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGGACAGCAATGAGACCACCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR CCA 72 bp | GAGGCTCTGCCGTGTATCTGCACTTTGACGGTCTCCTaGCTGTTTAGGTCAACTGTTTCACACACTGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EALPCICTLTVS*LFRSTVSHTVS Trigger: GGACACAGTGTGTGAAACAGTTGACCTAAACAGCCAGGAGACCGTCAAAGTGCAGATACACGGCAGAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR TCA 72 bp | CGCTGTCCAGCTTATCCAGCAAGCACTGCTATCCTCTaGCCCACCTCTCTGCCCATGTTTCATGTCTGTATA | + |
|
Preference number: 3 (lower is better) Translates to: RCPAYPASTAIL*PTSLPMFHVCI Trigger: TATACAGACATGAAACATGGGCAGAGAGGTGGGTCAGAGGATAGCAGTGCTTGCTGGATAAGCTGGACAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGGCATCATTTACATGGCACCCTGGGGACAGGGAAACCATCAGGAGTAGCTCGGCATTTGCCTTGTaGATCTTATTGCACACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CVASFTWHPGDRETIRSSSAFAL*ILLHTF Trigger: GAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGA...GCTACTCCTGATGGTTTCCCTGTCCCCAGGGTGCCATGTAAATGATGCCACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCCTTAATCCCCTATTTAGACCATACTGTCCTTGGACTGAGCTCCACACAGACTGTGTCCCTGTCTTaGTCCAGTTCTACATCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WPLIPYLDHTVLGLSSTQTVSLS*SSSTSA Trigger: TGCCGATGTAGAACTGGACAAAGACAGGGACACAGT...CTGTGTGGAGCTCAGTCCAAGGACAGTATGGTCTAAATAGGGGATTAAGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR TCA 72 bp | TTCTTATGCTGCTTTTTCCTCTTTGCAGATGTAGACTaGGCTTTCTTGTGTGGAGGCGACAGTCCTGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FLCCFFLFADVD*AFLCGGDSPGH Trigger: GTGGCCAGGACTGTCGCCTCCACACAAGAAAGCTCAGTCTACATCTGCAAAGAGGAAAAAGCAGCATAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
||
| 3UTR GCA 72 bp | ACATCAGTGATAGATTCTGAGGCTCTGCCGTGTATCTaGACTTTGACGGTCTCCTGGCTGTTTAGGTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: TSVIDSEALPCI*TLTVSWLFRST Trigger: AGTTGACCTAAACAGCCAGGAGACCGTCAAAGTGCAGATACACGGCAGAGCCTCAGAATCTATCACTGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR CCA 72 bp | TTGGCCCTTAATCCCCTATTTAGACCATACTGTCCTTaGACTGAGCTCCACACAGATCAACCTTCCTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LALNPLFRPYCP*TELHTDQPSCE Trigger: CTCACAGGAAGGTTGATCTGTGTGGAGCTCAGTCCAAGGACAGTATGGTCTAAATAGGGGATTAAGGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTACTGGGATTAAAGGCATGCACTACCACATGGGGTCCTCTCGACGTTTTGCCTTGTTGATCTTATaGCACACCTTCTCTTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VSTGIKGMHYHMGSSRRFALLIL*HTFSFC Trigger: GCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGC...AAAACGTCGAGAGGACCCCATGTGGTAGTGCATGCCTTTAATCCCAGTACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR TCA 72 bp | TGTCCTCTTTTAACCTCTGTGTGCCCCAGGAACACGTaGTGCACATACATACATACATGCAGGCCAGATACT | + |
|
Preference number: 3 (lower is better) Translates to: CPLLTSVCPRNT*CTYIHTCRPDT Trigger: AGTATCTGGCCTGCATGTATGTATGTATGTGCATCACGTGTTCCTGGGGCACACAGAGGTTAAAAGAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR GCA 72 bp | ATCCAGCAAGCACTGCTATCCTCTGACCCACCTCTCTaGCCATGTTTCATGTCTGTATACAGCAAGTATTAT | + |
|
Preference number: 3 (lower is better) Translates to: IQQALLSSDPPL*PCFMSVYSKYY Trigger: ATAATACTTGCTGTATACAGACATGAAACATGGGCAGAGAGGTGGGTCAGAGGATAGCAGTGCTTGCTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACAGACAGACAGACAGACAGACGGACATTTAGGCAAAGCAATAATGCACATGCTGGACACTGTTTTCTaGTGTTTGTTGAGGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EQTDRQTDGHLGKAIMHMLDTVF*CLLRLS Trigger: AGACAGCCTCAACAAACACAAGAAAACAGTGTCCAG...CATGTGCATTATTGCTTTGCCTAAATGTCCGTCTGTCTGTCTGTCTGTCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR TCA 72 bp | ACCTTTAAGGCCTCCAGCTGTTTCCTTGTTCAGGTTTaGGACAGGTTCTCATTATGCAATTCTAATTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TFKASSCFLVQV*DRFSLCNSNWP Trigger: GGGCCAATTAGAATTGCATAATGAGAACCTGTCTCAAACCTGAACAAGGAAACAGCTGGAGGCCTTAAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR GCA 72 bp | TGTGTCCCTGTCTTTGTCCAGTTCTACATCGGCATTTaGCTTGTTGATCTTATTGCACACCTTCTCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CVPVFVQFYIGI*LVDLIAHLLFL Trigger: CAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGATGTAGAACTGGACAAAGACAGGGACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR CCA 72 bp | AGGGCACACAACTTTCAAAGGATGAATTCAGAAGGCTaGGAAGGCTCAGCAGTTAGGTATATATGCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RAHNFQRMNSEG*EGSAVRYICRF Trigger: AAACCTGCATATATACCTAACTGCTGAGCCTTCCCAGCCTTCTGAATTCATCCTTTGAAAGTTGTGTGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATTATGCAATTCTAATTGGCCCTTAATCCCCTATTTAGACCATACTGTCCTTCCGTGTATCTGCACTTaGACGGTCTCCTGGCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLCNSNWPLIPYLDHTVLPCICT*TVSWLF Trigger: AAACAGCCAGGAGACCGTCAAAGTGCAGATACACGG...AAGGACAGTATGGTCTAAATAGGGGATTAAGGGCCAATTAGAATTGCATAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGTATACAGCAAGTATTATCTACTGTAAGAAAACCTTTAAGGCCTCCAGCTGGAAGACAGGCAGTTTaGTACAGTGTTGAGCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: VCIQQVLSTVRKPLRPPAGRQAV*YSVEHE Trigger: TTCATGCTCAACACTGTACAAAACTGCCTGTCTTCC...AGCTGGAGGCCTTAAAGGTTTTCTTACAGTAGATAATACTTGCTGTATACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGTATACAGCAAGTATTATCTACTGTAAGAAAACCTTTAAGGCCTCCAGCTTACAGTTTTAATTCCTaGGAACAGATTAGCCGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VCIQQVLSTVRKPLRPPAYSFNS*EQISRH Trigger: GTGCCGGCTAATCTGTTCCAAGGAATTAAAACTGTA...AGCTGGAGGCCTTAAAGGTTTTCTTACAGTAGATAATACTTGCTGTATACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR-3UTR CAA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTGCTTTGCGGAATGTTTaGAATGTGTGTGCATCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HIVELLTSHDQANSSEYSALRNV*NVCASS Trigger: ACTTGATGCACACACATTCAAAACATTCCGCAAAGC...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAGCTTTGCGGAATGTTTaGAATGTGTGTGCATCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TISFDTFHTSCSQNRSGLALRNV*NVCASS Trigger: ACTTGATGCACACACATTCAAAACATTCCGCAAAGC...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAAGCTTTGCGGAATGTTTaGAATGTGTGTGCATCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKALRNV*NVCASS Trigger: ACTTGATGCACACACATTCAAAACATTCCGCAAAGC...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | CACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAGTGCTGTGGTCCACTTaGGACTCCCCGCAGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HKLRFLQPSLPGTGRQMPVLWST*DSPQPT Trigger: TGTTGGCTGCGGGGAGTCGCAAGTGGACCACAGCAC...TGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | AGATTAGCCGGCACAACAGATCCTGGCCTGCTCTTGTGCCACAACTCGGTCATTGTGCTGTGGTCCACTTaGGACTCCCCGCAGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RLAGTTDPGLLLCHNSVIVLWST*DSPQPT Trigger: TGTTGGCTGCGGGGAGTCGCAAGTGGACCACAGCAC...AATGACCGAGTTGTGGCACAAGAGCAGGCCAGGATCTGTTGTGCCGGCTAATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS-3UTR CCA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGGCACGCCCACAGGTTTaGTCCTCTGACTTTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMARPQV*SSDFTV Trigger: GACTGTAAAGTCAGAGGACCAAACCTGTGGGCGTGC...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| 3UTR CAA 72 bp | AGGTCATCCTCGTCCTGGATGAGCATGGTGGTCTCATaGCTGTCCTCAGGAAAGCCTTTGGAGCCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSSSSWMSMVVS*LSSGKPLEPLS Trigger: TGAGAGTGGCTCCAAAGGCTTTCCTGAGGACAGCAATGAGACCACCATGCTCATCCAGGACGAGGATGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS-3UTR GCA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGGTAGTGCCCACTACTTaGAGTCCCATGGTGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMVVPTT*SPMVTD Trigger: ATCTGTCACCATGGGACTGCAAGTAGTGGGCACTAC...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAACCGCACGCCCACAGGTTTaGTCCTCTGACTTTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLRFLQPSLPGTGRQMPTARPQV*SSDFTV Trigger: GACTGTAAAGTCAGAGGACCAAACCTGTGGGCGTGC...GGTTGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | AAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAACCCTGTACAGTGGACTCTaGAACTTCAGTGACGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLRFLQPSLPGTGRQMPTLYSGL*NFSDAL Trigger: CAGAGCGTCACTGAAGTTTCAGAGTCCACTGTACAG...GGTTGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AGCTTATCCAGCAAGCACTGCTATCCTCTGACCCACCTCTCTGCCCATGTTTCAGCACGCCCACAGGTTTaGTCCTCTGACTTTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSKHCYPLTHLSAHVSARPQV*SSDFTV Trigger: GACTGTAAAGTCAGAGGACCAAACCTGTGGGCGTGC...TGAAACATGGGCAGAGAGGTGGGTCAGAGGATAGCAGTGCTTGCTGGATAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS-3UTR CCA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCTCAGGAAAGCCTTTaGAGCCACTCTCATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMPQESL*SHSHFL Trigger: CAGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGG...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCACTGAAAATCCACATCTaGCTGGCTCTTCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKLRFLQPSLPGTGRQMPLKIHI*LALLFL Trigger: GAGGAAGAGAAGAGCCAGTCAGATGTGGATTTTCAG...TGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAGTACGCTTCACCACATaGCCCTGCTTTGACTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKLRFLQPSLPGTGRQMPVRFTT*PCFDYS Trigger: ACTATAGTCAAAGCAGGGTCATGTGGTGAAGCGTAC...TGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGATGGTGACAGATGACTaGCAGGAGATCATATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMMVTDD*QEIICH Trigger: GTGACATATGATCTCCTGTCAGTCATCTGTCACCAT...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | TTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAAGTGCTGTGGTCCACTTaGGACTCCCCGCAGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQCYKGFAGSACRTKVREVLWST*DSPQPT Trigger: TGTTGGCTGCGGGGAGTCGCAAGTGGACCACAGCAC...TTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGGTCAACATGAACAACTaGAGGTCGGAGGATAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMVNMNN*RSEDNF Trigger: GAAGTTATCCTCCGACCTCCAGTTGTTCATGTTGAC...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTTTCCTCTTTGCAGATGTAGACTGAGCTTTCTTGTGTGGAGGCGACAGAGGTCATCCTCGTCCTaGATGAGCATGGTGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFPLCRCRLSFLVWRRQRSSSS*MSMVVS Trigger: TGAGACCACCATGCTCATCCAGGACGAGGATGACCT...CTGTCGCCTCCACACAAGAAAGCTCAGTCTACATCTGCAAAGAGGAAAAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAACCGTCAACATGAACAACTaGAGGTCGGAGGATAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLRFLQPSLPGTGRQMPTVNMNN*RSEDNF Trigger: GAAGTTATCCTCCGACCTCCAGTTGTTCATGTTGAC...GGTTGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| 3UTR CAA 72 bp | TTGATCTTATTGCACACCTTCTCTTTCTGCCAGTCTTaGGCCATCTCCAGGTCATCCTCGTCCTGGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LILLHTFSFCQS*AISRSSSSWMS Trigger: GCTCATCCAGGACGAGGATGACCTGGAGATGGCCAAAGACTGGCAGAAAGAGAAGGTGTGCAATAAGATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS-3UTR TCA 90 bp | GTTACGGGACCGTTTACCTTTCTTGTGTGGAGGCGACAGTCCTGGCCACAGACTCGTTATTTCACCAACTaGATCCAAATGTGGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: VTGPFTFLVWRRQSWPQTRYFTN*IQMWTM Trigger: CATTGTCCACATTTGGATTCAGTTGGTGAAATAACG...AGTCTGTGGCCAGGACTGTCGCCTCCACACAAGAAAGGTAAACGGTCCCGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS-3UTR TCA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGGAGAAAATCATTATTTaGAATAGGGCCAGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMEKIII*NRARFS Trigger: GCTGAACCTGGCCCTATTTCAAATAATGATTTTCTC...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGACAGTTTTAATTCCTTaGAACAGATTAGCCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMTVLIP*NRLAGT Trigger: TGTGCCGGCTAATCTGTTCCAAGGAATTAAAACTGT...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGGCTAGGTCATTCAGATaGACATCAGTGATAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMARSFR*TSVIDS Trigger: AGAATCTATCACTGATGTCCATCTGAATGACCTAGC...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | CACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAATCTTTTCCTCTGCTTaGAGTACATCAGGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HKLRFLQPSLPGTGRQMPIFSSA*STSGST Trigger: TGTTGACCCTGATGTACTCCAAGCAGAGGAAAAGAT...TGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAGAGAAAATCATTATTTaGAATAGGGCCAGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKLRFLQPSLPGTGRQMPEKIII*NRARFS Trigger: GCTGAACCTGGCCCTATTTCAAATAATGATTTTCTC...TGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ATCGAATATGTCGGAGATGACACTTCTGTATTTCTTATGCTGCTTTTTCCTCTTCGTTCCAGGCCAGCCTaGGGCTCTGCCGTGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IEYVGDDTSVFLMLLFPLRSRPA*GSAVYL Trigger: CAGATACACGGCAGAGCCTCAGGCTGGCCTGGAACG...AAGAGGAAAAAGCAGCATAAGAAATACAGAAGTGTCATCTCCGACATATTCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
||
| CDS-3UTR GCA 90 bp | CACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCACATGGGGGTTTTCAATaGTGGATTACTGGGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKLRFLQPSLPGTGRQMPHGGFQ*WITGNF Trigger: AAAATTCCCAGTAATCCAGCATTGAAAACCCCCATG...TGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAACCACAGTTTTAATTCCTTaGAACAGATTAGCCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KLRFLQPSLPGTGRQMPTTVLIP*NRLAGT Trigger: TGTGCCGGCTAATCTGTTCCAAGGAATTAAAACTGT...GGTTGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAACCGCTAGGTCATTCAGATaGACATCAGTGATAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLRFLQPSLPGTGRQMPTARSFR*TSVIDS Trigger: AGAATCTATCACTGATGTCCATCTGAATGACCTAGC...GGTTGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | TTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAATCCTTCAGCTCCTCATaGAGCAGGTCCATTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LQCYKGFAGSACRTKVRESFSSS*SRSIRQ Trigger: CTGTCTAATGGACCTGCTTCATGAGGAGCTGAAGGA...TTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTGTGCTGTGGTCCACTTaGGACTCCCCGCAGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSVLWST*DSPQPT Trigger: TGTTGGCTGCGGGGAGTCGCAAGTGGACCACAGCAC...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGACAACAGATCCTGGCCTaGTCTTGTGCCACAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRQQILA*SCATTR Trigger: CCGAGTTGTGGCACAAGAGCAGGCCAGGATCTGTTG...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAACCTAGTTACCAACGCAGCAAGACAATCTTaGAAGGTAACTACTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLDLPVEQRSENLVTNAARQS*KVTTGP Trigger: GGGTCCAGTAGTTACCTTGCAAGATTGTCTTGCTGC...GTTGGTAACTAGGTTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAACCTAGTTACCAACAGCTGGGCTGTCCTTTaGAAGAAATGGCTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLDLPVEQRSENLVTNSWAVL*KKWLKI Trigger: GATCTTCAGCCATTTCTTGCAAAGGACAGCCCAGCT...GTTGGTAACTAGGTTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | TTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAATCATATGTCACAATCTaGGCTGGGCTGTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQCYKGFAGSACRTKVRESYVTI*AGLSFA Trigger: TGCAAAGGACAGCCCAGCTCAGATTGTGACATATGA...TTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | AAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAACCTAGTTACCAACACTCTGAAACTTCAGTaGCGCTCTGGTCATCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLDLPVEQRSENLVTNTLKLQ*RSGHQT Trigger: AGTTTGATGACCAGAGCGTCACTGAAGTTTCAGAGT...GTTGGTAACTAGGTTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | AAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAACCCCAAAAATACTTCTTTaGTGCAAGCATAACACCATA | + |
|
Preference number: 4 (lower is better) Translates to: KLRFLQPSLPGTGRQMPTPKILL*CKHNTI Trigger: TATGGTGTTATGCTTGCAGCAAAGAAGTATTTTTGG...GGTTGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAAGGTCATCCTCGTCCTaGATGAGCATGGTGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRRSSSS*MSMVVS Trigger: TGAGACCACCATGCTCATCCAGGACGAGGATGACCT...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCAACCCGAAATCTTTTAAGGTaGATACACAAAATCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLRFLQPSLPGTGRQMPTRNLLR*IHKISG Trigger: TCCTGAGATTTTGTGTATCCACCTTAAAAGATTTCG...GGTTGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAACCTAGTTACCAACAGGGGGAAGGAAACATaGGTGCTAATTTTGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGLLDLPVEQRSENLVTNRGKET*VLILVE Trigger: TTCCACCAAAATTAGCACCCATGTTTCCTTCCCCCT...GTTGGTAACTAGGTTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAACCTAGTTACCAACTGTCACAATCTGAGCTaGGCTGTCCTTTGCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGLLDLPVEQRSENLVTNCHNLS*AVLCKK Trigger: TTTCTTGCAAAGGACAGCCCAGCTCAGATTGTGACA...GTTGGTAACTAGGTTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| 3UTR CAA 72 bp | TCCCTGTCTTTGTCCAGTTCTACATCGGCATTTGCCTaGTTGATCTTATTGCACACCTTCTCTTTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSSSTSAFA*LILLHTFSFCQ Trigger: CTGGCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGATGTAGAACTGGACAAAGACAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAGGCAAGGACAGATCCTaGAAGGTCTCGAGGGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRGKDRS*KVSRVI Trigger: TATAACCCTCGAGACCTTTCAGGATCTGTCCTTGCC...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTACGCTTCACCACATaGCCCTGCTTTGACTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKYLQCYKGFAGSACRTKVRFTT*PCFDYS Trigger: ACTATAGTCAAAGCAGGGTCATGTGGTGAAGCGTAC...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTACAACAGATCCTGGCCTaGTCTTGTGCCACAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TISFDTFHTSCSQNRSGLQQILA*SCATTR Trigger: CCGAGTTGTGGCACAAGAGCAGGCCAGGATCTGTTG...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGGTAGTGCCCACTACTTaGAGTCCCATGGTGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QENQHALRNVLNVCASSEVVPTT*SPMVTD Trigger: ATCTGTCACCATGGGACTGCAAGTAGTGGGCACTAC...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAACCTAGTTACCAACTTCAATCTTTTCCTCTaGTTGGAGTACATCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLDLPVEQRSENLVTNFNLFL*LEYIRV Trigger: GACCCTGATGTACTCCAAGCAGAGGAAAAGATTGAA...GTTGGTAACTAGGTTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGTGCTTTGACTATAGTTaGGTGACTGGAGGAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKYLQCYKGFAGSACRTKCFDYS*VTGGVQ Trigger: CTGCACTCCTCCAGTCACCCAACTATAGTCAAAGCA...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | TTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAATTGCAAGGTAACTACTaGACCCCAAAACCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQCYKGFAGSACRTKVRELQGNY*TPKPAL Trigger: AAGAGCTGGTTTTGGGGTCCAGTAGTTACCTTGCAA...TTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 |
||
| 3UTR CAA 72 bp | CTGTCTTTGTCCAGTTCTACATCGGCATTTGCCTTGTaGATCTTATTGCACACCTTCTCTTTCTGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSSTSAFAL*ILLHTFSFCQS Trigger: AGACTGGCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGATGTAGAACTGGACAAAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| 3UTR CAA 72 bp | TTTAGGTCAACTGTTTCACACACTGTGTCCCTGTCTTaGTCCAGTTCTACATCGGCATTTGCCTTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FRSTVSHTVSLS*SSSTSAFALLI Trigger: GATCAACAAGGCAAATGCCGATGTAGAACTGGACAAAGACAGGGACACAGTGTGTGAAACAGTTGACCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGATCCCATGGTGACAGATaGCTGACAGGAGATCATATG | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRSHGDR*LTGDHM Trigger: CATATGATCTCCTGTCAGTCATCTGTCACCATGGGA...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGTCCCATGGTGACAGATaGCTGACAGGAGATCATATG | + |
|
Preference number: 4 (lower is better) Translates to: QENQHALRNVLNVCASSESHGDR*LTGDHM Trigger: CATATGATCTCCTGTCAGTCATCTGTCACCATGGGA...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTCAACAGATCCTGGCCTaGTCTTGTGCCACAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VIRTLSKPKYLQCYKGFAQQILA*SCATTR Trigger: CCGAGTTGTGGCACAAGAGCAGGCCAGGATCTGTTG...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAGCAGCAAGACAATCTTaGAAGGTAACTACTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRAARQS*KVTTGP Trigger: GGGTCCAGTAGTTACCTTGCAAGATTGTCTTGCTGC...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATCCAGAGTCTGCTCCTTaGTTGAGCATCACACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDANHHAAILKQFNKRYYPESAP*LSITLP Trigger: TGGCAGTGTGATGCTCAAGCAAGGAGCAGACTCTGG...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTACCAGAGTCTGCTCCTTaGTTGAGCATCACACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TISFDTFHTSCSQNRSGLPESAP*LSITLP Trigger: TGGCAGTGTGATGCTCAAGCAAGGAGCAGACTCTGG...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCACCAGAGTCTGCTCCTTaGTTGAGCATCACACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENQENQHALRNVLNVCASPESAP*LSITLP Trigger: TGGCAGTGTGATGCTCAAGCAAGGAGCAGACTCTGG...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGAGCACGCCCACAGGTTTaGTCCTCTGACTTTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGARPQV*SSDFTV Trigger: GACTGTAAAGTCAGAGGACCAAACCTGTGGGCGTGC...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGAAGGTCATCCTCGTCCTaGATGAGCATGGTGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGRSSSS*MSMVVS Trigger: TGAGACCACCATGCTCATCCAGGACGAGGATGACCT...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAGTCCTTTGCAAGAAATaGCTGAAGATCGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRVLCKK*LKIEAF Trigger: GAAGGCCTCGATCTTCAGCCATTTCTTGCAAAGGAC...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGTTGCAAGGTAACTACTaGACCCCAAAACCAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QENQHALRNVLNVCASSELQGNY*TPKPAR Trigger: CCTAGCTGGTTTTGGGGTCCAGTAGTTACCTTGCAA...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197748.5 |
||
| 3UTR CAA 72 bp | TATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTaGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YRSQSIYSATKG*LDLPVEQRSEN Trigger: GTTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | TTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAACGTTATTTCACCAACTaGATCCAAATGTGGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: LQCYKGFAGSACRTKVRERYFTN*IQMWTM Trigger: CATTGTCCACATTTGGATTCAGTTGGTGAAATAACG...TTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | GAACAGACAGACAGACAGACAGACGGACATTTAGGCAAAGCAATAATGCACATGATACTCGAAGAGTGGTaGGGTTCACAGTTAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQTDRQTDGHLGKAIMHMILEEW*GSQLDN Trigger: ATTATCTAACTGTGAACCTCACCACTCTTCGAGTAT...CATGTGCATTATTGCTTTGCCTAAATGTCCGTCTGTCTGTCTGTCTGTCTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS-3UTR TCA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCCTTCAGCTCCTCATaGAGCAGGTCCATTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGSFSSS*SRSIRQ Trigger: CTGTCTAATGGACCTGCTTCATGAGGAGCTGAAGGA...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTGGCAAGGACAGATCCTaGAAGGTCTCGAGGGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSGKDRS*KVSRVI Trigger: TATAACCCTCGAGACCTTTCAGGATCTGTCCTTGCC...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAATGGTGACAGATGACTaGCAGGAGATCATATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRMVTDD*QEIICH Trigger: GTGACATATGATCTCCTGTCAGTCATCTGTCACCAT...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAACTCTGAAACTTCAGTaGCGCTCTGGTCATCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRTLKLQ*RSGHQT Trigger: AGTTTGATGACCAGAGCGTCACTGAAGTTTCAGAGT...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCACTGTACAGTGGACTCTaGAACTTCAGTGACGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENQENQHALRNVLNVCASLYSGL*NFSDAL Trigger: CAGAGCGTCACTGAAGTTTCAGAGTCCACTGTACAG...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTAGTCTGCTCCTTGCTTaGGCATCACACTGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSSLLLA*ASHCHI Trigger: AATGTGGCAGTGTGATGCTCAAGCAAGGAGCAGACT...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTAGGTCATCCTCGTCCTaGATGAGCATGGTGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIRTLSKPKYLQCYKGFARSSSS*MSMVVS Trigger: TGAGACCACCATGCTCATCCAGGACGAGGATGACCT...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGACAGTAAAAAGTAGCTaGGGAGTCCTCCTCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKYLQCYKGFAGSACRTKTVKSS*GVLLLK Trigger: TTTCAAGAGGAGGACTCCCCAGCTACTTTTTACTGT...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAGTCAACATGAACAACTaGAGGTCGGAGGATAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRVNMNN*RSEDNF Trigger: GAAGTTATCCTCCGACCTCCAGTTGTTCATGTTGAC...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTTCCTTCAGCTCCTCATaGAGCAGGTCCATTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VIRTLSKPKYLQCYKGFASFSSS*SRSIRQ Trigger: CTGTCTAATGGACCTGCTTCATGAGGAGCTGAAGGA...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTCTGAAAATCCACATCTaGCTGGCTCTTCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSLKIHI*LALLFL Trigger: GAGGAAGAGAAGAGCCAGTCAGATGTGGATTTTCAG...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTACTGAAAATCCACATCTaGCTGGCTCTTCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TISFDTFHTSCSQNRSGLLKIHI*LALLFL Trigger: GAGGAAGAGAAGAGCCAGTCAGATGTGGATTTTCAG...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | TTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAACGAATATGTCGGAGATaGCACTTCTGTATTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LQCYKGFAGSACRTKVRERICRR*HFCISY Trigger: ATAAGAAATACAGAAGTGTCATCTCCGACATATTCG...TTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATGTACGCTTCACCACATaGCCCTGCTTTGACTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TDANHHAAILKQFNKRYYVRFTT*PCFDYS Trigger: ACTATAGTCAAAGCAGGGTCATGTGGTGAAGCGTAC...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCATATGTCACAATCTaGGCTGGGCTGTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGSYVTI*AGLSFA Trigger: TGCAAAGGACAGCCCAGCTCAGATTGTGACATATGA...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTTCATATGTCACAATCTaGGCTGGGCTGTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSSYVTI*AGLSFA Trigger: TGCAAAGGACAGCCCAGCTCAGATTGTGACATATGA...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAGATGTTCAACAAATTTaGTATCCTCCGCCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRDVQQI*YPPPLL Trigger: AAGGAGAGGCGGAGGATATCAAATTTGTTGAACATC...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTAGTCTGCTCCTTGCTTaGGCATCACACTGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: VELLTSHDQANSSEYSIISLLLA*ASHCHI Trigger: AATGTGGCAGTGTGATGCTCAAGCAAGGAGCAGACT...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTAGTCTGCTCCTTGCTTaGGCATCACACTGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: IVELLTSHDQANSSEYSISLLLA*ASHCHI Trigger: AATGTGGCAGTGTGATGCTCAAGCAAGGAGCAGACT...AATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTCCAGCTAGGGACACATaGGACAACAAACCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VIRTLSKPKYLQCYKGFAPARDT*DNKPLH Trigger: GTGAAGAGGTTTGTTGTCTCATGTGTCCCTAGCTGG...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGCTGCTTTTTCCTCTTTaGAGATGTAGACTGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKYLQCYKGFAGSACRTKLLFPL*RCRLSF Trigger: AAAGCTCAGTCTACATCTGCAAAGAGGAAAAAGCAG...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCACAGACACAGCAACCATaGGGGTTTTCAATGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ENQENQHALRNVLNVCASQTQQP*GFSMLD Trigger: ATCCAGCATTGAAAACCCCCATGGTTGCTGTGTCTG...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGACAGTTTTAATTCCTTaGAACAGATTAGCCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PKYLQCYKGFAGSACRTKTVLIP*NRLAGT Trigger: TGTGCCGGCTAATCTGTTCCAAGGAATTAAAACTGT...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGAAAATCCACATCTGACTaGCTCTTCTCTTCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGKSTSD*LFSSST Trigger: GGTGGAGGAAGAGAAGAGCCAGTCAGATGTGGATTT...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATAAATCCACATCTGACTaGCTCTTCTCTTCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TDANHHAAILKQFNKRYYKSTSD*LFSSST Trigger: GGTGGAGGAAGAGAAGAGCCAGTCAGATGTGGATTT...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTACCTCAGGAAAGCCTTTaGAGCCACTCTCATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TISFDTFHTSCSQNRSGLPQESL*SHSHFL Trigger: CAGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGG...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCACCTCAGGAAAGCCTTTaGAGCCACTCTCATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENQENQHALRNVLNVCASPQESL*SHSHFL Trigger: CAGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGG...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTGTCCTTTGCAAGAAATaGCTGAAGATCGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSVLCKK*LKIEAF Trigger: GAAGGCCTCGATCTTCAGCCATTTCTTGCAAAGGAC...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAGTCCTTTGCAAGAAATaGCTGAAGATCGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENQENQHALRNVLNVCASVLCKK*LKIEAF Trigger: GAAGGCCTCGATCTTCAGCCATTTCTTGCAAAGGAC...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGACAGTAAAAAGTAGCTaGGGAGTCCTCCTCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QENQHALRNVLNVCASSETVKSS*GVLLLK Trigger: TTTCAAGAGGAGGACTCCCCAGCTACTTTTTACTGT...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGCGTTATTTCACCAACTaGATCCAAATGTGGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: QENQHALRNVLNVCASSERYFTN*IQMWTM Trigger: CATTGTCCACATTTGGATTCAGTTGGTGAAATAACG...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAAACAGGTTTGGTCCTCTaGCTTTACAGTCCTGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKTGLVL*LYSPDK Trigger: CTTGTCAGGACTGTAAAGTCAGAGGACCAAACCTGT...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAATACTCGAAGAGTGGTaGGGTTCACAGTTAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRILEEW*GSQLDN Trigger: ATTATCTAACTGTGAACCTCACCACTCTTCGAGTAT...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCATCTTCACATACTCCATaGAGAAAGCTATCCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ENQENQHALRNVLNVCASSSHTP*RKLSTP Trigger: AGGGGTGGATAGCTTTCTTCATGGAGTATGTGAAGA...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATTCTTCACATACTCCATaGAGAAAGCTATCCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDANHHAAILKQFNKRYYSSHTP*RKLSTP Trigger: AGGGGTGGATAGCTTTCTTCATGGAGTATGTGAAGA...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGAATGGTGACAGATGACTaGCAGGAGATCATATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGMVTDD*QEIICH Trigger: GTGACATATGATCTCCTGTCAGTCATCTGTCACCAT...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATACTCTGAAACTTCAGTaGCGCTCTGGTCATCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TDANHHAAILKQFNKRYYTLKLQ*RSGHQT Trigger: AGTTTGATGACCAGAGCGTCACTGAAGTTTCAGAGT...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGACATGGGGGTTTTCAATaGTGGATTACTGGGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRHGGFQ*WITGNF Trigger: AAAATTCCCAGTAATCCAGCATTGAAAACCCCCATG...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAAGCAGCAAGACAATCTTaGAAGGTAACTACTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKAARQS*KVTTGP Trigger: GGGTCCAGTAGTTACCTTGCAAGATTGTCTTGCTGC...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | ATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTAGCTGGGCTGTCCTTTaGAAGAAATGGCTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: IVELLTSHDQANSSEYSISWAVL*KKWLKI Trigger: GATCTTCAGCCATTTCTTGCAAAGGACAGCCCAGCT...AATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAAAAATCCACATCTGACTaGCTCTTCTCTTCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKKSTSD*LFSSST Trigger: GGTGGAGGAAGAGAAGAGCCAGTCAGATGTGGATTT...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTTGCTTTGACTATAGTTaGGTGACTGGAGGAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VIRTLSKPKYLQCYKGFACFDYS*VTGGVQ Trigger: CTGCACTCCTCCAGTCACCCAACTATAGTCAAAGCA...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGAAGGGGGAAGGAAACATaGGTGCTAATTTTGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGRGKET*VLILVE Trigger: TTCCACCAAAATTAGCACCCATGTTTCCTTCCCCCT...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTTGTCACAATCTGAGCTaGGCTGTCCTTTGCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSCHNLS*AVLCKK Trigger: TTTCTTGCAAAGGACAGCCCAGCTCAGATTGTGACA...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR TCA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGCGAATATGTCGGAGATaGCACTTCTGTATTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QENQHALRNVLNVCASSERICRR*HFCISY Trigger: ATAAGAAATACAGAAGTGTCATCTCCGACATATTCG...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR TCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAATCTTCACATACTCCATaGAGAAAGCTATCCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKSSHTP*RKLSTP Trigger: AGGGGTGGATAGCTTTCTTCATGGAGTATGTGAAGA...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR GCA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGACCACCATATATAGACTaGAGGAAATTCCATGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVCASSENNFSLELCVLRPPYID*RKFHVS Trigger: AGAAACATGGAATTTCCTGCAGTCTATATATGGTGG...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR GCA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATTCAATCTTTTCCTCTaGTTGGAGTACATCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGFNLFL*LEYIRV Trigger: GACCCTGATGTACTCCAAGCAGAGGAAAAGATTGAA...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR GCA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCATTCAATCTTTTCCTCTaGTTGGAGTACATCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ENQENQHALRNVLNVCASFNLFL*LEYIRV Trigger: GACCCTGATGTACTCCAAGCAGAGGAAAAGATTGAA...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CCA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTTTGCAAGGTAACTACTaGACCCCAAAACCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIRTLSKPKYLQCYKGFALQGNY*TPKPAL Trigger: AAGAGCTGGTTTTGGGGTCCAGTAGTTACCTTGCAA...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 |
||
| CDS-3UTR CCA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTAGGGGGAAGGAAACATaGGTGCTAATTTTGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VELLTSHDQANSSEYSIIRGKET*VLILVE Trigger: TTCCACCAAAATTAGCACCCATGTTTCCTTCCCCCT...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTCGTTATTTCACCAACTaGATCCAAATGTGGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSRYFTN*IQMWTM Trigger: CATTGTCCACATTTGGATTCAGTTGGTGAAATAACG...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAATACTCGAAGAGTGGTaGGGTTCACAGTTAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TISFDTFHTSCSQNRSGLILEEW*GSQLDN Trigger: ATTATCTAACTGTGAACCTCACCACTCTTCGAGTAT...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGATGTTCAACAAATTTaGTATCCTCCGCCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIRTLSKPKYLQCYKGFADVQQI*YPPPLL Trigger: AAGGAGAGGCGGAGGATATCAAATTTGTTGAACATC...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTGAGAAAATCATTATTTaGAATAGGGCCAGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSEKIII*NRARFS Trigger: GCTGAACCTGGCCCTATTTCAAATAATGATTTTCTC...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR TCA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATATTCCATGTTTCTTCTaGAATTTGACCAGAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDANHHAAILKQFNKRYYIPCFF*NLTRVC Trigger: GCAGACTCTGGTCAAATTTCAGAAGAAACATGGAAT...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR TCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTCCATGTTTCTTCTaGAATTTGACCAGAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSIPCFF*NLTRVC Trigger: GCAGACTCTGGTCAAATTTCAGAAGAAACATGGAAT...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR GCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTCTGCTTTTTCCTCTTTaGAGATGTAGACTGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSLLFPL*RCRLSF Trigger: AAAGCTCAGTCTACATCTGCAAAGAGGAAAAAGCAG...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR GCA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTTTTGTGCCTCTTCACTaGTCTTCCTGTAGAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VELLTSHDQANSSEYSIIFVPLH*SSCRKG Trigger: TCCTTTTCTACAGGAAGAGCAGTGAAGAGGCACAAA...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR GCA 90 bp | ATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTTTTGTGCCTCTTCACTaGTCTTCCTGTAGAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVELLTSHDQANSSEYSIFVPLH*SSCRKG Trigger: TCCTTTTCTACAGGAAGAGCAGTGAAGAGGCACAAA...AATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAGCTAGGTCATTCAGATaGACATCAGTGATAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TISFDTFHTSCSQNRSGLARSFR*TSVIDS Trigger: AGAATCTATCACTGATGTCCATCTGAATGACCTAGC...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGCGAAATCTTTTAAGGTaGATACACAAAATCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QENQHALRNVLNVCASSERNLLR*IHKISG Trigger: TCCTGAGATTTTGTGTATCCACCTTAAAAGATTTCG...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAAACAGTAAAAAGTAGCTaGGGAGTCCTCCTCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKTVKSS*GVLLLK Trigger: TTTCAAGAGGAGGACTCCCCAGCTACTTTTTACTGT...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAAATCTTTTCCTCTGCTTaGAGTACATCAGGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKIFSSA*STSGST Trigger: TGTTGACCCTGATGTACTCCAAGCAGAGGAAAAGAT...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTATCTTTTCCTCTGCTTaGAGTACATCAGGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VIRTLSKPKYLQCYKGFAIFSSA*STSGST Trigger: TGTTGACCCTGATGTACTCCAAGCAGAGGAAAAGAT...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR TCA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTATACTCGAAGAGTGGTaGGGTTCACAGTTAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: VELLTSHDQANSSEYSIIILEEW*GSQLDN Trigger: ATTATCTAACTGTGAACCTCACCACTCTTCGAGTAT...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR TCA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGACGAATATGTCGGAGATaGCACTTCTGTATTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGRICRR*HFCISY Trigger: ATAAGAAATACAGAAGTGTCATCTCCGACATATTCG...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR TCA 90 bp | ATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTCCATGTTTCTTCTaGAATTTGACCAGAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IVELLTSHDQANSSEYSIIPCFF*NLTRVC Trigger: GCAGACTCTGGTCAAATTTCAGAAGAAACATGGAAT...AATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR GCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAACATGGGGGTTTTCAATaGTGGATTACTGGGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKHGGFQ*WITGNF Trigger: AAAATTCCCAGTAATCCAGCATTGAAAACCCCCATG...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTGGAGGAATACCTCCATaGATACAGAGAAAATCATTA | + |
|
Preference number: 4 (lower is better) Translates to: HIVELLTSHDQANSSEYSGGIPP*IQRKSL Trigger: TAATGATTTTCTCTGTATCCATGGAGGTATTCCTCC...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAGGAGGAATACCTCCATaGATACAGAGAAAATCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ENQENQHALRNVLNVCASGGIPP*IQRKSL Trigger: TAATGATTTTCTCTGTATCCATGGAGGTATTCCTCC...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR GCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAACCACCATATATAGACTaGAGGAAATTCCATGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKPPYID*RKFHVS Trigger: AGAAACATGGAATTTCCTGCAGTCTATATATGGTGG...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR GCA 90 bp | ATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTCCACCATATATAGACTaGAGGAAATTCCATGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVELLTSHDQANSSEYSIPPYID*RKFHVS Trigger: AGAAACATGGAATTTCCTGCAGTCTATATATGGTGG...AATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTGGAGGAATACCTCCATaGATACAGAGAAAATCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VELLTSHDQANSSEYSIIGGIPP*IQRKSL Trigger: TAATGATTTTCTCTGTATCCATGGAGGTATTCCTCC...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CCA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAACGAAATCTTTTAAGGTaGATACACAAAATCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKRNLLR*IHKISG Trigger: TCCTGAGATTTTGTGTATCCACCTTAAAAGATTTCG...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS TCA 90 bp | GATGTGTTTGATAGCCTGGTCTACATAGCACGTTCCAGGCCAGCCTaGGGCTCTGCCGTGTATCTGCACTTTGACGGTCTCCTGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DVFDSLVYIARSRPA*GSAVYLHFDGLLAV Trigger: AACAGCCAGGAGACCGTCAAAGTGCAGATACACGGCAGAGCCTCAGGCTGGCCTGGAACGTGCTATGTAGACCAGGCTATCAAACACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
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| CDS CCA 90 bp | GGCCAGCCTGAGGCTCTGCCGTGTATCTGCACTTTGACGGTCTCCTaGCTGTTTAGGTCAACTGTTTCACACACTGTGTCCCTGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQPEALPCICTLTVS*LFRSTVSHTVSLSL Trigger: CAAAGACAGGGACACAGTGTGTGAAACAGTTGACCTAAACAGCCAGGAGACCGTCAAAGTGCAGATACACGGCAGAGCCTCAGGCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
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| CDS-3UTR CAA 90 bp | ACATACTCCATGAAGAAAGCTATCCACCCCTGCGGGGCGTACGCTTCACCACATCCGTGTATCTGCACTTaGACGGTCTCCTGGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TYSMKKAIHPCGAYASPHPCICT*TVSWLF Trigger: AAACAGCCAGGAGACCGTCAAAGTGCAGATACACGG...ATGTGGTGAAGCGTACGCCCCGCAGGGGTGGATAGCTTTCTTCATGGAGTATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
||
| CDS-3UTR CAA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGTCCTCAGGAAAGCCTTaGGAGCCACTCTCATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMSSGKP*EPLSFS Trigger: AGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGGA...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
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| CDS TCA 90 bp | GGCAATGTAGTGCCCACTACTTGCAGTCCCATGGTGACAGATGACTaGCAGGAGATCATATGTCACAATCTGAGCTGGGCTGTCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GNVVPTTCSPMVTDD*QEIICHNLSWAVLC Trigger: GCAAAGGACAGCCCAGCTCAGATTGTGACATATGATCTCCTGTCAGTCATCTGTCACCATGGGACTGCAAGTAGTGGGCACTACATTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | GTTACGGGACCGTTTACCTTTCTTGTGTGGAGGCGACAGTCCTGGCCACAGACTCAGTTAGATAATGCTTaGTCTCCTGCGAGTGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: VTGPFTFLVWRRQSWPQTQLDNA*SPASVW Trigger: CCATACACTCGCAGGAGACAAAGCATTATCTAACTG...AGTCTGTGGCCAGGACTGTCGCCTCCACACAAGAAAGGTAAACGGTCCCGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS-3UTR CAA 90 bp | GCCCACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCAGTTAGATAATGCTTaGTCTCCTGCGAGTGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: AHKLRFLQPSLPGTGRQMQLDNA*SPASVW Trigger: CCATACACTCGCAGGAGACAAAGCATTATCTAACTG...CATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS TCA 90 bp | ACCTCCAGGCACGCCCACAGGTTTGGTCCTCTGACTTTACAGTCCTaGCAAGCGCCGAGAGATTTCTGTATCAAGTCCTCTTTCGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: TSRHAHRFGPLTLQS*QAPRDFCIKSSFVI Trigger: AATAACGAAAGAGGACTTGATACAGAAATCTCTCGGCGCTTGTCAGGACTGTAAAGTCAGAGGACCAAACCTGTGGGCGTGCCTGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123237.8 |
||
| CDS TCA 90 bp | TTCTCCAGGCACGCCCACAGGTTTGGTCCTCTGACTTTACAGTCCTaGCAAGCGCCGAGAGATTTCTGTATCAAGTCCTCTTTCGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: FSRHAHRFGPLTLQS*QAPRDFCIKSSFVI Trigger: AATAACGAAAGAGGACTTGATACAGAAATCTCTCGGCGCTTGTCAGGACTGTAAAGTCAGAGGACCAAACCTGTGGGCGTGCCTGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ACAAACCTCTTCACATACTCCATGAAGAAAGCTATCCACCCCTGCGGGGCGTACTCGGCATTTGCCTTGTaGATCTTATTGCACACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNLFTYSMKKAIHPCGAYSAFAL*ILLHTF Trigger: GAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGA...GTACGCCCCGCAGGGGTGGATAGCTTTCTTCATGGAGTATGTGAAGAGGTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
||
| CDS GCA 90 bp | TCAACAAATTTGATATCCTCCGCCTCTCCTTTTGTGCCTCTTCACTaGTCTTCCTGTAGAAAAGGACGTAGGCCTCGGCATTCTGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: STNLISSASPFVPLH*SSCRKGRRPRHSVQ Trigger: CTGTACAGAATGCCGAGGCCTACGTCCTTTTCTACAGGAAGAGCAGTGAAGAGGCACAAAAGGAGAGGCGGAGGATATCAAATTTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CATGAGACAACAAACCTCTTCACATACTCCATGAAGAAAGCTATCCACCCCTGCACTGTGTCCCTGTCTTaGTCCAGTTCTACATCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HETTNLFTYSMKKAIHPCTVSLS*SSSTSA Trigger: TGCCGATGTAGAACTGGACAAAGACAGGGACACAGT...GCAGGGGTGGATAGCTTTCTTCATGGAGTATGTGAAGAGGTTTGTTGTCTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
||
| CDS-3UTR CAA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGCCTCCGCCTCTCCTTTaGTGCCTCTTCACTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PKYLQCYKGFAGSACRTKPPPLL*CLFTAL Trigger: AAGAGCAGTGAAGAGGCACAAAAGGAGAGGCGGAGG...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGTGGGGAGTCCTCCTCTaGAAATGCTCTGTTGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PKYLQCYKGFAGSACRTKWGVLL*KCSVEP Trigger: CGGCTCAACAGAGCATTTCAAGAGGAGGACTCCCCA...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGACCAGAGTCTGCTCCTaGCTTGAGCATCACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKYLQCYKGFAGSACRTKTRVCS*LEHHTA Trigger: GGCAGTGTGATGCTCAAGCAAGGAGCAGACTCTGGT...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGGATCCTGGCCTGCTCTaGTGCCACAACTCGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: QENQHALRNVLNVCASSEDPGLL*CHNSVI Trigger: AATGACCGAGTTGTGGCACAAGAGCAGGCCAGGATC...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CACCCTATCGCACGTCAGACACTGTACCGAGCTAATGACTGTTCCATCGAATATGCCTTGTTGATCTTATaGCACACCTTCTCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HPIARQTLYRANDCSIEYALLIL*HTFSFC Trigger: GCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGC...ATATTCGATGGAACAGTCATTAGCTCGGTACAGTGTCTGACGTGCGATAGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
||
| CDS-3UTR CAA 90 bp | CACAAACTTAGGTTCCTCCAGCCAAGCCTACCAGGTACTGGGAGACAGATGCCATCACAACTGTACATGTaGTCACCTTTAAGTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HKLRFLQPSLPGTGRQMPSQLYM*SPLSSS Trigger: AGATGAACTTAAAGGTGACAACATGTACAGTTGTGA...TGGCATCTGTCTCCCAGTACCTGGTAGGCTTGGCTGGAGGAACCTAAGTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | TTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAAGAGCTGGGCTGTCCTTaGCAAGAAATGGCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LQCYKGFAGSACRTKVREELGCP*QEMAED Trigger: ATCTTCAGCCATTTCTTGCAAAGGACAGCCCAGCTC...TTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGCCTCCGCCTCTCCTTTaGTGCCTCTTCACTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QENQHALRNVLNVCASSEPPPLL*CLFTAL Trigger: AAGAGCAGTGAAGAGGCACAAAAGGAGAGGCGGAGG...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAAGTGAGCCGTGTATCTGCACTTaGACGGTCTCCTGGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QENQHALRNVLNVCASSEPCICT*TVSWLF Trigger: AAACAGCCAGGAGACCGTCAAAGTGCAGATACACGG...CTCACTTGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTATTAGCCAGGTCCTCCTaGCCAGGAATCGGCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TISFDTFHTSCSQNRSGLLARSS*PGIGKD Trigger: GTCCTTGCCGATTCCTGGCAAGGAGGACCTGGCTAA...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATTAGCCAGGTCCTCCTaGCCAGGAATCGGCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGLARSS*PGIGKD Trigger: GTCCTTGCCGATTCCTGGCAAGGAGGACCTGGCTAA...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS TCA 90 bp | TATGTAGAACTGAAGGAGGCTAGGTTCCATGATGTTCAACAAATTTaGTATCCTCCGCCTCTCCTTTTGTGCCTCTTCACTGCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YVELKEARFHDVQQI*YPPPLLLCLFTALP Trigger: AGGAAGAGCAGTGAAGAGGCACAAAAGGAGAGGCGGAGGATATCAAATTTGTTGAACATCATGGAACCTAGCCTCCTTCAGTTCTACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | AAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAACCTAGTTACCAACTACAGTTTTAATTCCTaGGAACAGATTAGCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KGLLDLPVEQRSENLVTNYSFNS*EQISRH Trigger: GTGCCGGCTAATCTGTTCCAAGGAATTAAAACTGTA...GTTGGTAACTAGGTTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGAACTGTGTCCCTGTCTTaGTCCAGTTCTACATCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NVCASSENNFSLELCVLRTVSLS*SSSTSA Trigger: TGCCGATGTAGAACTGGACAAAGACAGGGACACAGT...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAATTAGCCAGGTCCTCCTaGCCAGGAATCGGCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKLARSS*PGIGKD Trigger: GTCCTTGCCGATTCCTGGCAAGGAGGACCTGGCTAA...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGAACCAGAGTCTGCTCCTaGCTTGAGCATCACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGTRVCS*LEHHTA Trigger: GGCAGTGTGATGCTCAAGCAAGGAGCAGACTCTGGT...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | TTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGTCAGAGAAAATCTTTTCCTCTGCTaGGAGTACATCAGGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LQCYKGFAGSACRTKVRENLFLC*EYIRVN Trigger: GTTGACCCTGATGTACTCCAAGCAGAGGAAAAGATT...TTCTCTGACCTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTGATCCTGGCCTGCTCTaGTGCCACAACTCGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VELLTSHDQANSSEYSIIDPGLL*CHNSVI Trigger: AATGACCGAGTTGTGGCACAAGAGCAGGCCAGGATC...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGATCCTGGCCTGCTCTaGTGCCACAACTCGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VIRTLSKPKYLQCYKGFADPGLL*CHNSVI Trigger: AATGACCGAGTTGTGGCACAAGAGCAGGCCAGGATC...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGGCCTTGTTGATCTTATaGCACACCTTCTCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PKYLQCYKGFAGSACRTKALLIL*HTFSFC Trigger: GCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGC...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTACCGTGTATCTGCACTTaGACGGTCTCCTGGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TISFDTFHTSCSQNRSGLPCICT*TVSWLF Trigger: AAACAGCCAGGAGACCGTCAAAGTGCAGATACACGG...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTTGGGGAGTCCTCCTCTaGAAATGCTCTGTTGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VELLTSHDQANSSEYSIIWGVLL*KCSVEP Trigger: CGGCTCAACAGAGCATTTCAAGAGGAGGACTCCCCA...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTACCAGAGTCTGCTCCTaGCTTGAGCATCACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VELLTSHDQANSSEYSIITRVCS*LEHHTA Trigger: GGCAGTGTGATGCTCAAGCAAGGAGCAGACTCTGGT...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS TCA 90 bp | AAAATACTTCTTTGCTGCAAGCATAACACCATACTCGAAGAGTGGTaGGGTTCACAGTTAGATAATGCTTTGTCTCCTGCGAGTGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: KILLCCKHNTILEEW*GSQLDNALSPASVW Trigger: CCATACACTCGCAGGAGACAAAGCATTATCTAACTGTGAACCTCACCACTCTTCGAGTATGGTGTTATGCTTGCAGCAAAGAAGTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000123237.8 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAACTGTGTCCCTGTCTTaGTCCAGTTCTACATCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TISFDTFHTSCSQNRSGLTVSLS*SSSTSA Trigger: TGCCGATGTAGAACTGGACAAAGACAGGGACACAGT...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAGGCAGCAAGACAATCTaGCAAGGTAACTACTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: ENQENQHALRNVLNVCASGSKTI*QGNYWT Trigger: GGTCCAGTAGTTACCTTGCAAGATTGTCTTGCTGCC...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATGGCAGCAAGACAATCTaGCAAGGTAACTACTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TDANHHAAILKQFNKRYYGSKTI*QGNYWT Trigger: GGTCCAGTAGTTACCTTGCAAGATTGTCTTGCTGCC...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTGAGCTGGGCTGTCCTTaGCAAGAAATGGCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HIVELLTSHDQANSSEYSELGCP*QEMAED Trigger: ATCTTCAGCCATTTCTTGCAAAGGACAGCCCAGCTC...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | AATGTGTGTGCATCAAGTGAGAATAACTTCTCATTAGAGCTCTGTGTCCTCAGATACAGTTTTAATTCCTaGGAACAGATTAGCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NVCASSENNFSLELCVLRYSFNS*EQISRH Trigger: GTGCCGGCTAATCTGTTCCAAGGAATTAAAACTGTA...TCTGAGGACACAGAGCTCTAATGAGAAGTTATTCTCACTTGATGCACACACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTATCCTCAGGAAAGCCTTaGGAGCCACTCTCATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TISFDTFHTSCSQNRSGLSSGKP*EPLSFS Trigger: AGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGGA...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ACAGATGCCAACCACCATGCTGCCATTCTGAAACAGTTTAATAAACGTTATTATTCCTCAGGAAAGCCTTaGGAGCCACTCTCATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TDANHHAAILKQFNKRYYSSGKP*EPLSFS Trigger: AGAAAATGAGAGTGGCTCCAAAGGCTTTCCTGAGGA...ATAATAACGTTTATTAAACTGTTTCAGAATGGCAGCATGGTGGTTGGCATCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026507.13 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | GTAATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTACTGTGTCCCTGTCTTaGTCCAGTTCTACATCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VIRTLSKPKYLQCYKGFATVSLS*SSSTSA Trigger: TGCCGATGTAGAACTGGACAAAGACAGGGACACAGT...AGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAAGAGCTGGGCTGTCCTTaGCAAGAAATGGCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKELGCP*QEMAED Trigger: ATCTTCAGCCATTTCTTGCAAAGGACAGCCCAGCTC...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGACAGTTAGATAATGCTTaGTCTCCTGCGAGTGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGQLDNA*SPASVW Trigger: CCATACACTCGCAGGAGACAAAGCATTATCTAACTG...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCACTGGACACTGTTTTCTaGTGTTTGTTGAGGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ENQENQHALRNVLNVCASLDTVF*CLLRLS Trigger: AGACAGCCTCAACAAACACAAGAAAACAGTGTCCAG...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTGCCTTGTTGATCTTATaGCACACCTTCTCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HIVELLTSHDQANSSEYSALLIL*HTFSFC Trigger: GCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGC...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | GAAAATCAAGAGAATCAACATGCTTTGCGGAATGTTTTGAATGTGTGTGCATCAGCCTTGTTGATCTTATaGCACACCTTCTCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ENQENQHALRNVLNVCASALLIL*HTFSFC Trigger: GCAGAAAGAGAAGGTGTGCAATAAGATCAACAAGGC...TGATGCACACACATTCAAAACATTCCGCAAAGCATGTTGATTCTCTTGATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
||
| CDS-3UTR CAA 90 bp | ACAATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTATCGGCATTTGCCTTGTaGATCTTATTGCACACCTTC | + |
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Preference number: 5 (lower is better) Translates to: TISFDTFHTSCSQNRSGLSAFAL*ILLHTF Trigger: GAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGA...TAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CAA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCGGCATTTGCCTTGTaGATCTTATTGCACACCTTC | + |
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Preference number: 5 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGSAFAL*ILLHTF Trigger: GAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGA...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CAA 90 bp | CCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGATCTGCCTGTAGAACAAAGTCACAACTGTACATGTaGTCACCTTTAAGTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: PKYLQCYKGFAGSACRTKSQLYM*SPLSSS Trigger: AGATGAACTTAAAGGTGACAACATGTACAGTTGTGA...CTTTGTTCTACAGGCAGATCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CAA 90 bp | ATAAGAACATTATCGAAGCCAAAGTATTTACAGTGCTACAAAGGGTTTGCTGGAAATCTTTTCCTCTGCTaGGAGTACATCAGGGTCAAC | + |
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Preference number: 5 (lower is better) Translates to: IRTLSKPKYLQCYKGFAGNLFLC*EYIRVN Trigger: GTTGACCCTGATGTACTCCAAGCAGAGGAAAAGATT...TCCAGCAAACCCTTTGTAGCACTGTAAATACTTTGGCTTCGATAATGTTCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CAA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAACAGTTAGATAATGCTTaGTCTCCTGCGAGTGTATGG | + |
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Preference number: 5 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKQLDNA*SPASVW Trigger: CCATACACTCGCAGGAGACAAAGCATTATCTAACTG...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CAA 90 bp | CATATAGTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTTACAGTTTTAATTCCTaGGAACAGATTAGCCGGCAC | + |
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Preference number: 5 (lower is better) Translates to: HIVELLTSHDQANSSEYSYSFNS*EQISRH Trigger: GTGCCGGCTAATCTGTTCCAAGGAATTAAAACTGTA...AGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAACTATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CAA 90 bp | GTTGAGCTTTTGACATCACATGATCAAGCAAACAGCAGTGAATACTCTATTATTTCGGCATTTGCCTTGTaGATCTTATTGCACACCTTC | + |
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Preference number: 5 (lower is better) Translates to: VELLTSHDQANSSEYSIISAFAL*ILLHTF Trigger: GAAGGTGTGCAATAAGATCAACAAGGCAAATGCCGA...AATAATAGAGTATTCACTGCTGTTTGCTTGATCATGTGATGTCAAAAGCTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CAA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAAAATCTTTTCCTCTGCTaGGAGTACATCAGGGTCAAC | + |
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Preference number: 5 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKNLFLC*EYIRVN Trigger: GTTGACCCTGATGTACTCCAAGCAGAGGAAAAGATT...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS-3UTR CAA 90 bp | ATCTCATTTGACACATTCCATACTTCATGCTCTCAAAATAGAAGTGGCCTAAAATCACAACTGTACATGTaGTCACCTTTAAGTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: ISFDTFHTSCSQNRSGLKSQLYM*SPLSSS Trigger: AGATGAACTTAAAGGTGACAACATGTACAGTTGTGA...TTTTAGGCCACTTCTATTTTGAGAGCATGAAGTATGGAATGTGTCAAATGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS TCA 72 bp | GATAGCCTGGTCTACATAGCACGTTCCAGGCCAGCCTaGGGCTCTGCCGTGTATCTGCACTTTGACGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: DSLVYIARSRPA*GSAVYLHFDGL Trigger: GAGACCGTCAAAGTGCAGATACACGGCAGAGCCTCAGGCTGGCCTGGAACGTGCTATGTAGACCAGGCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197600.2 |
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| CDS GCA 72 bp | CAGTTAGATAATGCTTTGTCTCCTGCGAGTGTATGGTaGTGTGGTCCACTTGCGACTCCCCGCAGCCAACAT | + |
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Preference number: 6 (lower is better) Translates to: QLDNALSPASVW*CGPLATPRSQH Trigger: ATGTTGGCTGCGGGGAGTCGCAAGTGGACCACAGCACCATACACTCGCAGGAGACAAAGCATTATCTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000123237.8 ENSMUST00000197748.5 |
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| CDS CCA 72 bp | TCACAGTTAGATAATGCTTTGTCTCCTGCGAGTGTATaGTGCTGTGGTCCACTTGCGACTCCCCGCAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SQLDNALSPASV*CCGPLATPRSQ Trigger: TTGGCTGCGGGGAGTCGCAAGTGGACCACAGCACCATACACTCGCAGGAGACAAAGCATTATCTAACTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000123237.8 ENSMUST00000197748.5 |
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| CDS TCA 72 bp | ACTCAATTTGGCAGGTGTGGCAGATGTAGAGATGGTTaGCAGCAGGCCCTCCTCCATACCTGCTATAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: TQFGRCGRCRDG*QQALLHTCYRG Trigger: ACCTCTATAGCAGGTATGGAGGAGGGCCTGCTGTCAACCATCTCTACATCTGCCACACCTGCCAAATTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS CAA 72 bp | GGAGATCATATGTCACAATCTGAGCTGGGCTGTCCTTaGCAAGAAATGGCTGAAGATCGAGGCCTTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GDHMSQSELGCP*QEMAEDRGLPG Trigger: CCCTGGAAGGCCTCGATCTTCAGCCATTTCTTGCAAAGGACAGCCCAGCTCAGATTGTGACATATGATCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS TCA 72 bp | ATCTTTTCCTCTGCTTGGAGTACATCAGGGTCAACATaGACAACTGGAGGTCGGAGGATAACTTCAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: IFSSAWSTSGST*TTGGRRITSGP Trigger: GGGGCCTGAAGTTATCCTCCGACCTCCAGTTGTTCATGTTGACCCTGATGTACTCCAAGCAGAGGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS CCA 72 bp | TCTAAACCACTGCATGCTGATACAGTAAAAAGTAGCTaGGGAGTCCTCCTCTTGAAATGCTCTGTTGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SKPLHADTVKSS*GVLLLKCSVEP Trigger: CGGCTCAACAGAGCATTTCAAGAGGAGGACTCCCCAGCTACTTTTTACTGTATCAGCATGCAGTGGTTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000197748.5 |
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| CDS TCA 72 bp | CTTTGCTGCAAGCATAACACCATACTCGAAGAGTGGTaGGGTTCACAGTTAGATAATGCTTTGTCTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LCCKHNTILEEW*GSQLDNALSPA Trigger: CGCAGGAGACAAAGCATTATCTAACTGTGAACCTCACCACTCTTCGAGTATGGTGTTATGCTTGCAGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026507.13 ENSMUST00000117492.9 ENSMUST00000123237.8 ENSMUST00000197748.5 |
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