Pregenerated sensors for USP32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000804Ensembl transcript IDs: ENSMUST00000000821.15, ENSMUST00000108075.9, ENSMUST00000172515.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCCATCTaGGCTGGACACCATGGCTGCCTTTCCTTTCTCCTGGTTCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: WQLPHPAVRLYRRAI*AGHHGCLSFLLVLR Trigger: TCTGAGAACCAGGAGAAAGGAAAGGCAGCCATGGTGTCCAGCTCAGATGGCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR CAA 90 bp | TTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAGGCAGTaGTTTAAGACAACTGCTCCAACTGTGCCGAGAACTAGGCGGTTA | + |
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Preference number: 2 (lower is better) Translates to: LQVYSLFWEGGQPRQ*FKTTAPTVPRTRRL Trigger: TAACCGCCTAGTTCTCGGCACAGTTGGAGCAGTTGTCTTAAACAACTGCCTAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTAAACCCTGTGGCAGCTaGCACACCCAGCAGTGCGCC | + |
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Preference number: 2 (lower is better) Translates to: RGSDNKPESIPRVLMNIFKPCGS*HTQQCA Trigger: GGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTT...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTATCACAACACGAACACTaGCTACATTGGTATTTACTA | + |
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Preference number: 2 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLSQHEH*LHWYLL Trigger: TAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGA...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR-3UTR GCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACTTCCTAGAAGCTGTGTaGAACATCAGCTTGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYFLEAV*NISLGP Trigger: AGGTCCCAAGCTGATGTTGCACACAGCTTCTAGGAA...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR GCA 72 bp | TGGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTaGGCCTCTACAGGAGGGCCATCTGAGCTGGACACC | + |
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Preference number: 3 (lower is better) Translates to: WCKPCGSCHTQQ*ASTGGPSELDT Trigger: GGTGTCCAGCTCAGATGGCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR TCA 72 bp | CCACACCCAGCAGTGCGCCTCTACAGGAGGGCCATCTaGGCTGGACACCATGGCTGCCTTTCCTTTCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: PHPAVRLYRRAI*AGHHGCLSFLL Trigger: CAGGAGAAAGGAAAGGCAGCCATGGTGTCCAGCTCAGATGGCCCTCCTGTAGAGGCGCACTGCTGGGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR CCA 72 bp | CCCAGCAGTGCGCCTCTACAGGAGGGCCATCTGAGCTaGACACCATGGCTGCCTTTCCTTTCTCCTGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PSSAPLQEGHLS*TPWLPFLSPGS Trigger: AGAACCAGGAGAAAGGAAAGGCAGCCATGGTGTCCAGCTCAGATGGCCCTCCTGTAGAGGCGCACTGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR CCA 72 bp | TGCAACATCAGCTTGGGACCTATGGTGCAAACCCTGTaGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGG | + |
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Preference number: 3 (lower is better) Translates to: CNISLGPMVQTL*QLPHPAVRLYR Trigger: CCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACCATAGGTCCCAAGCTGATGTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR GCA 72 bp | CTGGCTTCGCAGCCGCCTACCTTCCTAGAAGCTGTGTaGAACATCAGCTTGGGACCTATGGTGCAAACCCTG | + |
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Preference number: 3 (lower is better) Translates to: LASQPPTFLEAV*NISLGPMVQTL Trigger: CAGGGTTTGCACCATAGGTCCCAAGCTGATGTTGCACACAGCTTCTAGGAAGGTAGGCGGCTGCGAAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR GCA 72 bp | GAGACTCTTCGGTTCAGACTGACCGTCATATGCCTCTaGCACCAATCACTGTTTCAAACACAAAACCAACAA | + |
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Preference number: 3 (lower is better) Translates to: ETLRFRLTVICL*HQSLFQTQNQQ Trigger: TTGTTGGTTTTGTGTTTGAAACAGTGATTGGTGGCAGAGGCATATGACGGTCAGTCTGAACCGAAGAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000821.15 ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCCAGCCAGGGGGCCCCTaGAGCAGGCTGATAACCCAC | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGQPGGP*SRLITH Trigger: GTGGGTTATCAGCCTGCTGCAGGGGCCCCCTGGCTG...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCAGGGCGAATAGGTGGTaGAACCAATGGACCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGRANRW*NQWTKG Trigger: ACCTTTGGTCCATTGGTTTCACCACCTATTCGCCCT...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCGACATTTGCACTGAGTaGAGATGGGCTCTTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGDICTE*RWALAQ Trigger: CTGAGCAAGAGCCCATCTTCACTCAGTGCAAATGTC...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCGCTGCAGACCATACCTaGTTTCTCGTTCCAACCATC | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGAADHT*FLVPTI Trigger: GATGGTTGGAACGAGAAAGCAGGTATGGTCTGCAGC...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCTGTCCGCCATCTTCTTaGCGTCTGTCTTTGGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGCPPSS*RLSLAE Trigger: TTCTGCCAAAGACAGACGGCAAGAAGATGGCGGACA...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCGCATCCCAAAGAGACTaGGGCGATTCTTCTGAGATG | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGASQRD*GDSSEM Trigger: CATCTCAGAAGAATCGCCCCAGTCTCTTTGGGATGC...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCCAATTGTGTCCTGGCTaGAGACCATACCTGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGQLCPG*RPYLLS Trigger: AGAAAGCAGGTATGGTCTGCAGCCAGGACACAATTG...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCCATTGCTATAGCCATTaGCACATGCCTCATGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGHCYSH*HMPHAH Trigger: ATGAGCATGAGGCATGTGGCAATGGCTATAGCAATG...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCGGTATGTACAGTACATaGAACAATCAGTGGCATCCC | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGGMYST*NNQWHP Trigger: GGGATGCCACTGATTGTTCCATGTACTGTACATACC...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCCAGGAATATCATCAGTaGGGTTATCTTTCCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGQEYHQ*GYLSRP Trigger: AGGTCTGGAAAGATAACCGCACTGATGATATTCCTG...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCTGGCGCCCTTTTCTGTaGGAACTTTATGTCTATCTA | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGWRPFL*ELYVYL Trigger: TAGATAGACATAAAGTTCCCACAGAAAAGGGCGCCA...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCGATGGCCCACCTTTGTaGTATCATGTGCATTCAATA | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGDGPPL*YHVHSI Trigger: TATTGAATGCACATGATACCACAAAGGTGGGCCATC...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTACATGATCCAGAGGAGTaGCCAGCTCAGGCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLHDPEE*PAQAGC Trigger: GCAGCCAGCCTGAGCTGGTCACTCCTCTGGATCATG...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCCGATTTTACAGCCTCTaGAAAATCTATACCATGGAC | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGRFYSL*KIYTMD Trigger: GTCCATGGTATAGATTTTGCAGAGGCTGTAAAATCG...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCATTAAGTTATTGAAATaGAGCCCTTTGGATGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GANPVAAATPSSAPLQEGIKLLK*SPLDVP Trigger: TGGAACATCCAAAGGGCTGCATTTCAATAACTTAAT...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAACTCTTCCAAATGTGTaGCTCCAGCCAGAGTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLTLPNV*LQPEFG Trigger: ACCAAACTCTGGCTGGAGTCACACATTTGGAAGAGT...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | GAAGGGCCAGGTTTGATCCATACCAATGATAAAGTGCTCTCCACACGGGTTCTGACTGCCAGTAGACTCTaGGGCTTCAGATGCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: EGPGLIHTNDKVLSTRVLTASRL*GFRCRR Trigger: TCTTCTGCATCTGAAGCCTCAGAGTCTACTGGCAGT...CAGAACCCGTGTGGAGAGCACTTTATCATTGGTATGGATCAAACCTGGCCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172515.2 |
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| CDS-3UTR GCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAAGTGTTATGCTGCCTTaGAAAGCACATATCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLSVMLP*KAHICP Trigger: GGGGCAGATATGTGCTTTGCAAGGCAGCATAACACT...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAAAACCAATTGTGTCCTaGCTGCAGACCATACCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLKPIVS*LQTIPA Trigger: AGCAGGTATGGTCTGCAGCCAGGACACAATTGGTTT...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| 3UTR CAA 72 bp | TACTCACTCTTCTGGGAAGGGGGTCAACCTAGGCAGTaGTTTAAGACAACTGCTCCAACTGTGCCGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: YSLFWEGGQPRQ*FKTTAPTVPRT Trigger: AGTTCTCGGCACAGTTGGAGCAGTTGTCTTAAACAACTGCCTAGGTTGACCCCCTTCCCAGAAGAGTGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTATGGGATTTGTCCTGTTaGGTTCATAAAGATGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLWDLSC*VHKDAS Trigger: GGAGGCATCTTTATGAACTCAACAGGACAAATCCCA...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTACTGAGAAACACTTCCTaGGTGTATCTGGGACTTTAC | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLLRNTS*VYLGLY Trigger: GTAAAGTCCCAGATACACTCAGGAAGTGTTTCTCAG...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTATACCTTTTCACCCTCTaGGAAACACTTCCTGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLYLFTL*ETLPEC Trigger: ACACTCAGGAAGTGTTTCTCAGAGGGTGAAAAGGTA...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTATATTCTTTCCACTGTTaGCACCACTGCATGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLYSFHC*HHCMEM Trigger: CATCTCCATGCAGTGGTGGCAACAGTGGAAAGAATA...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAGAGCATATTTTGCTATaGTCCACCGGAGCTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLEHILL*STGALR Trigger: CCTTAAAGCTCCGGTGGACCATAGCAAAATATGCTC...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAGCTATTCTTGATTACTaGTCTAGGAAGGGCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLAILDY*SRKGQV Trigger: AACCTGGCCCTTCCTAGACCAGTAATCAAGAATAGC...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAGATATTGATAGCCCATaGTGTCATCACAATCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLDIDSP*CHHNPV Trigger: CACAGGATTGTGATGACAGCATGGGCTATCAATATC...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTATTACCATCCACCACATaGAGCATTCTCTCCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLLPSTT*SILSIS Trigger: AGAAATGGAGAGAATGCTCCATGTGGTGGATGGTAA...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAGTTATCAATTGCTCCTaGCTTCTGAGGATTAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLVINCS*LLRIKV Trigger: CACCTTAATCCTCAGAAGCCAGGAGCAATTGATAAC...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTGCGCCTCCTCGTAGCTaGGGAATCCGATCCGTGACT | + |
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Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFAPPRS*GIRSVT Trigger: AGTCACGGATCGGATTCCTCAGCTACGAGGAGGCGC...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTATTGTCAGAAGTGTTATaGTGCCTTGCAAAGCACATA | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLLSEVL*CLAKHI Trigger: TATGTGCTTTGCAAGGCAGCATAACACTTCTGACAA...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAGCTCCTAGTAAACACTaGTTGTTATTGTCAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLAPSKH*LLLSEV Trigger: CACTTCTGACAATAACAACCAGTGTTTACTAGGAGC...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CCA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTACCCAGAATTCCTGAATaGCACGAAATTGCATATAGA | + |
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Preference number: 4 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLPRIPE*HEIAYR Trigger: TCTATATGCAATTTCGTGCCATTCAGGAATTCTGGG...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR TCA 90 bp | GAAGGGCCAGGTTTGATCCATACCAATGATAAAGTGCTCTCCACACGGGTTCTGAACCAAGGTTATTACTaGTTCTATCTTCTCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: EGPGLIHTNDKVLSTRVLNQGYY*FYLLHA Trigger: AGCATGGAGAAGATAGAATCAGTAATAACCTTGGTT...CAGAACCCGTGTGGAGAGCACTTTATCATTGGTATGGATCAAACCTGGCCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172515.2 |
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| CDS-3UTR GCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACGTGAAGATGGGCTCTTaGTCAGGAGCACATCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYVKMGS*SGAHPP Trigger: AGGAGGATGTGCTCCTGAGCAAGAGCCCATCTTCAC...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR GCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTCCAGCTCAGGCTGGCTaGCTCCCAATACATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFPAQAG*LPIHVF Trigger: GAAGACATGTATTGGGAGGCAGCCAGCCTGAGCTGG...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTGTGACCAGCTCAGGCTaGCTGCCTCCCAATACATGT | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFVTSSG*LPPNTC Trigger: ACATGTATTGGGAGGCAGCCAGCCTGAGCTGGTCAC...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACTGTCACTGTCATCAGTaGGGGTCACATATACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYCHCHQ*GSHIHP Trigger: GGGGTGTATATGTGACCCTCACTGATGACAGTGACA...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACACTGCCAGTAGACTCTaGGGCTTCAGATGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYTASRL*GFRCRR Trigger: TCTTCTGCATCTGAAGCCTCAGAGTCTACTGGCAGT...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACTATCTGCCCCTGGTGTaGCAGAATACAGAAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYYLPLV*QNTESH Trigger: GTGGCTTTCTGTATTCTGGCACACCAGGGGCAGATA...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACCCCACCCAGAATTCCTaGATGGCACGAAATTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYPTQNS*MARNCI Trigger: TATGCAATTTCGTGCCATTCAGGAATTCTGGGTGGG...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACCTTTCAGTTCAACCCTaGAGAGAACTCCATCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYLSVQP*RELHHG Trigger: ACCGTGATGGAGTTCTCTCCAGGGTTGAACTGAAAG...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACGTGAATAATCAGGATTaGAGGAAGCCTCCAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYVNNQD*RKPPEV Trigger: GACCTCTGGAGGCTTCCTCCAATCCTGATTATTCAC...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTATTGCTCCTGGCTTCTaGGGATTAAGGTGCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFIAPGF*GLRCKR Trigger: CCTTTTGCACCTTAATCCTCAGAAGCCAGGAGCAAT...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTGCCTTTACTGGTTCCTaGGTTACTAGTGGCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFAFTGS*VTSGWL Trigger: TAACCAGCCACTAGTAACTCAGGAACCAGTAAAGGC...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACGGAAGAGGCGGCATATaGCCATTCACTATTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYGRGGI*PFTIPF Trigger: AAATGGAATAGTGAATGGTCATATGCCGCCTCTTCC...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACTGGCTGGTTATCAATTaGTCCTGGCTTCTGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYWLVIN*SWLLRI Trigger: AATCCTCAGAAGCCAGGAGCAATTGATAACCAGCCA...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTCTTCCTGAGTGTATCTaGGACTTTACCATCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFLPECI*DFTIHH Trigger: GTGGTGGATGGTAAAGTCCCAGATACACTCAGGAAG...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTGCACATATCTGCCCCTaGTGTGCCAGAATACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFAHICP*CARIQK Trigger: TTTCTGTATTCTGGCACACCAGGGGCAGATATGTGC...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACCACAGGATATCTCCTTaGAGTCTATGTGATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYHRISP*SLCDCH Trigger: GTGACAATCACATAGACTTCAAGGAGATATCCTGTG...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTAATTGGACTGCAAGCTaGAACTGGAGATGCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFNWTAS*NWRCRN Trigger: ATTCCTGCATCTCCAGTTTCAGCTTGCAGTCCAATT...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTCCAGACCTCCAAAAGTaGAACTACCATGTCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFPDLQK*NYHVFQ Trigger: CTGAAAGACATGGTAGTTGCACTTTTGGAGGTCTGG...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACACATATGGTTTCTCGTaGACTCGGTTGAGATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYTYGFS*TRLRSS Trigger: TGAAGATCTCAACCGAGTCCACGAGAAACCATATGT...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTTCTCCACACGGGTTCTaGGACCATTTCATAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFSPHGF*DHFIIS Trigger: AGAGATTATGAAATGGTCCCAGAACCCGTGTGGAGA...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTGCAAAATCTATACCATaGACACCAGGCACAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFAKSIP*TPGTGV Trigger: AACTCCTGTGCCTGGTGTCCATGGTATAGATTTTGC...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACAGAGGTCCAGTTTCTTaGTTGCCAAACAGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYRGPVS*LPNSVF Trigger: AAACACACTGTTTGGCAACCAAGAAACTGGACCTCT...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTGTTTCTCCAGATCGATaGTGTCTGACTCTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFVSPDR*CLTLPN Trigger: ATTTGGAAGAGTCAGACATCATCGATCTGGAGAAAC...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACGGCTGGCATCATATTTaGCATATTCTTTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYGWHHI*HILSTV Trigger: AACAGTGGAAAGAATATGTCAAATATGATGCCAGCC...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACCAACTATTAAGTTATTaGAATGCAGCCCTTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYQLLSY*NAALWM Trigger: CATCCAAAGGGCTGCATTTCAATAACTTAATAGTTG...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACTCCTTGAAGTCTATGTaGTTGTCACGATTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYSLKSM*LSRFSS Trigger: TGATGAAAATCGTGACAATCACATAGACTTCAAGGA...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACCCTTTCTACAATGTCTaGCAAATCCATATGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYPFYNV*QIHMQF Trigger: GAATTGCATATGGATTTGTCAGACATTGTAGAAAGG...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACAACCAAGGTTATTACTaGTTCTATCTTCTCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYNQGYY*FYLLHA Trigger: AGCATGGAGAAGATAGAATCAGTAATAACCTTGGTT...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTTGGACAATTTATTTTTaGTGCCAATTTGAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSDNKPESIPRVLMNIFWTIYF*CQFEAA Trigger: GGCTGCCTCAAATTGGCAGCAAAAATAAATTGTCCA...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCGACTCCAGCCAGAGTTaGGTAGAAAGTAGGAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GANPVAAATPSSAPLQEGDSSQS*VESRSV Trigger: GACACTCCTACTTTCTACCAAACTCTGGCTGGAGTC...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCCAGAGGTCCAGTTTCTaGGTTGCCAAACAGTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GANPVAAATPSSAPLQEGQRSSF*VAKQCV Trigger: AACACACTGTTTGGCAACCAAGAAACTGGACCTCTG...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCTTGAAATGCAGCCCTTaGGATGTTCCACCAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GANPVAAATPSSAPLQEGLKCSP*DVPPKE Trigger: TTCTTTTGGTGGAACATCCAAAGGGCTGCATTTCAA...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCTATGCTGGCAAAGAGTaGGGTCTCTTGGTACTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GANPVAAATPSSAPLQEGYAGKE*GLLVLK Trigger: TTTTAGTACCAAGAGACCCAACTCTTTGCCAGCATA...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCCCTAGTAAACACTGGTaGTTATTGTCAGAAGTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GANPVAAATPSSAPLQEGPSKHW*LLSEVL Trigger: TAACACTTCTGACAATAACAACCAGTGTTTACTAGG...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCAAACCCTGTGGCAGCTGCCACACCCAGCAGTGCGCCTCTACAGGAGGGCGGAAGTTCTTTATGTTaGAACTATGCACTTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GANPVAAATPSSAPLQEGGSSLC*NYALLQ Trigger: TTGCAGAAGTGCATAGTTCAAACATAAAGAACTTCC...GCCCTCCTGTAGAGGCGCACTGCTGGGTGTGGCAGCTGCCACAGGGTTTGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAGTGGCTGGTTATCAATaGCTCCTGGCTTCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLVAGYQ*LLASED Trigger: ATCCTCAGAAGCCAGGAGCAATTGATAACCAGCCAC...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAGAGATGATAAACCAATaGTGTCCTGGCTGCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLEMINQ*CPGCRP Trigger: TGGTCTGCAGCCAGGACACAATTGGTTTATCATCTC...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS CCA 90 bp | CCACTGTTGCCACCACTGCATGGAGATGATAAACCAATTGTGTCCTaGCTGCAGACCATACCTGCTTTCTCGTTCCAACCATCCTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLLPPLHGDDKPIVS*LQTIPAFSFQPSSN Trigger: ATTAGAGGATGGTTGGAACGAGAAAGCAGGTATGGTCTGCAGCCAGGACACAATTGGTTTATCATCTCCATGCAGTGGTGGCAACAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCACTCCTTCCTTGCAAGTATACTCACTCTTCTGGGAAGGGGGTCAACCTAGGTCCAGTTTCTTGGTaGCCAAACAGTGTGTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RPLLPCKYTHSSGKGVNLGPVSW*PNSVFY Trigger: GTAAAACACACTGTTTGGCAACCAAGAAACTGGACC...TAGGTTGACCCCCTTCCCAGAAGAGTGAGTATACTTGCAAGGAAGGAGTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS GCA 90 bp | GTTGTTATTGTCAGAAGTGTTATGCTGCCTTGCAAAGCACATATCTaGCCCTGGTGTGCCAGAATACAGAAAGCCACTGCCAGTAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: VVIVRSVMLPCKAHI*PWCARIQKATASRL Trigger: GAGTCTACTGGCAGTGGCTTTCTGTATTCTGGCACACCAGGGGCAGATATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS GCA 90 bp | GGGCTGGCATCATATTTGACATATTCTTTCCACTGTTGCCACCACTaGATGGAGATGATAAACCAATTGTGTCCTGGCTGCAGACCATAC | + |
|
Preference number: 5 (lower is better) Translates to: GLASYLTYSFHCCHH*MEMINQLCPGCRPY Trigger: GTATGGTCTGCAGCCAGGACACAATTGGTTTATCATCTCCATGCAGTGGTGGCAACAGTGGAAAGAATATGTCAAATATGATGCCAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS GCA 90 bp | CCATTGGCTCCTAGTAAACACTGGTTGTTATTGTCAGAAGTGTTATaGTGCCTTGCAAAGCACATATCTGCCCCTGGTGTGCCAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: PLAPSKHWLLLSEVL*CLAKHISAPGVPEY Trigger: GTATTCTGGCACACCAGGGGCAGATATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACTAGGAGCCAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS GCA 90 bp | TGTTGCCACCACTGCATGGAGATGATAAACCAATTGTGTCCTGGCTaGAGACCATACCTGCTTTCTCGTTCCAACCATCCTCTAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: CCHHCMEMINQLCPG*RPYLLSRSNHPLII Trigger: AATTATTAGAGGATGGTTGGAACGAGAAAGCAGGTATGGTCTGCAGCCAGGACACAATTGGTTTATCATCTCCATGCAGTGGTGGCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS GCA 90 bp | TTGGCTCCTAGTAAACACTGGTTGTTATTGTCAGAAGTGTTATGCTaGCTTGCAAAGCACATATCTGCCCCTGGTGTGCCAGAATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LAPSKHWLLLSEVLC*LAKHISAPGVPEYR Trigger: TCTGTATTCTGGCACACCAGGGGCAGATATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACTAGGAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS GCA 90 bp | TTCAGGAATATCATCAGTGCGGTTATCTTTCCAGACCTCCAAAAGTaGAACTACCATGTCTTTCAGTTCAACCCTGGAGAGAACTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FRNIISAVIFPDLQK*NYHVFQFNPGENSI Trigger: GATGGAGTTCTCTCCAGGGTTGAACTGAAAGACATGGTAGTTGCACTTTTGGAGGTCTGGAAAGATAACCGCACTGATGATATTCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS GCA 90 bp | ATTACAACAGGGCTGGCATCATATTTGACATATTCTTTCCACTGTTaGCACCACTGCATGGAGATGATAAACCAATTGTGTCCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ITTGLASYLTYSFHC*HHCMEMINQLCPGC Trigger: GCAGCCAGGACACAATTGGTTTATCATCTCCATGCAGTGGTGGCAACAGTGGAAAGAATATGTCAAATATGATGCCAGCCCTGTTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
||
| CDS-3UTR CAA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACAAGTGTTATGCTGCCTaGCAAAGCACATATCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYKCYAA*QSTYLP Trigger: GGGCAGATATGTGCTTTGCAAGGCAGCATAACACTT...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CCA 90 bp | GGATTAAGGTGCAAAAGGATATTCCCATTGGCTCCTAGTAAACACTaGTTGTTATTGTCAGAAGTGTTATGCTGCCTTGCAAAGCACATA | + |
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Preference number: 5 (lower is better) Translates to: GLRCKRIFPLAPSKH*LLLSEVLCCLAKHI Trigger: TATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACTAGGAGCCAATGGGAATATCCTTTTGCACCTTAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CAA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACCTCTTGAAGGCATCTTaGAGTCGTTTCAGCTCAACA | + |
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Preference number: 5 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYLLKAS*SRFSST Trigger: TGTTGAGCTGAAACGACTCAAAGATGCCTTCAAGAG...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS GCA 90 bp | CTACAATGTCTGACAAATCCATATGCAATTCAGGAATATCATCAGTaGGGTTATCTTTCCAGACCTCCAAAAGTGCAACTACCATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: LQCLTNPYAIQEYHQ*GYLSRPPKVQLPCL Trigger: AAGACATGGTAGTTGCACTTTTGGAGGTCTGGAAAGATAACCGCACTGATGATATTCCTGAATTGCATATGGATTTGTCAGACATTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CAA 90 bp | GTTACTGATCTCAGCTATCACAACACGAACACTGACTACATTGGTATTTACTACTCCGTTTTGCTATTCTaGATTACTGGTCTAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: VTDLSYHNTNTDYIGIYYSVLLF*ITGLGR Trigger: CCTTCCTAGACCAGTAATCAAGAATAGCAAAACGGA...GTAGTAAATACCAATGTAGTCAGTGTTCGTGTTGTGATAGCTGAGATCAGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CAA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTGGGCTGGCATCATATTaGACATATTCTTTCCACTGT | + |
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Preference number: 5 (lower is better) Translates to: RGSDNKPESIPRVLMNIFGLASY*TYSFHC Trigger: ACAGTGGAAAGAATATGTCAAATATGATGCCAGCCC...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS-3UTR CAA 90 bp | AGAGGATCTGACAACAAACCAGAATCAATTCCCAGGGTCTTGATGAATATTTTTCCATCCTCTAATAATTaGTCCTTCTTCTTCTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: RGSDNKPESIPRVLMNIFPSSNN*SFFFWS Trigger: ACTCCAGAAGAAGAAGGACAAATTATTAGAGGATGG...AAAAATATTCATCAAGACCCTGGGAATTGATTCTGGTTTGTTGTCAGATCCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS GCA 72 bp | GTCAGAAGTGTTATGCTGCCTTGCAAAGCACATATCTaGCCCTGGTGTGCCAGAATACAGAAAGCCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: VRSVMLPCKAHI*PWCARIQKATA Trigger: GGCAGTGGCTTTCTGTATTCTGGCACACCAGGGGCAGATATGTGCTTTGCAAGGCAGCATAACACTTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CCA 72 bp | AGTGTTATGCTGCCTTGCAAAGCACATATCTGCCCCTaGTGTGCCAGAATACAGAAAGCCACTGCCAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SVMLPCKAHICP*CARIQKATASR Trigger: TCTACTGGCAGTGGCTTTCTGTATTCTGGCACACCAGGGGCAGATATGTGCTTTGCAAGGCAGCATAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CAA 72 bp | CACTGTTGCCACCACTGCATGGAGATGATAAACCAATaGTGTCCTGGCTGCAGACCATACCTGCTTTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: HCCHHCMEMINQ*CPGCRPYLLSR Trigger: ACGAGAAAGCAGGTATGGTCTGCAGCCAGGACACAATTGGTTTATCATCTCCATGCAGTGGTGGCAACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CAA 90 bp | TATTCTTTCCACTGTTGCCACCACTGCATGGAGATGATAAACCAATaGTGTCCTGGCTGCAGACCATACCTGCTTTCTCGTTCCAACCAT | + |
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Preference number: 6 (lower is better) Translates to: YSFHCCHHCMEMINQ*CPGCRPYLLSRSNH Trigger: ATGGTTGGAACGAGAAAGCAGGTATGGTCTGCAGCCAGGACACAATTGGTTTATCATCTCCATGCAGTGGTGGCAACAGTGGAAAGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CAA 90 bp | CTCCTAGTAAACACTGGTTGTTATTGTCAGAAGTGTTATGCTGCCTaGCAAAGCACATATCTGCCCCTGGTGTGCCAGAATACAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LLVNTGCYCQKCYAA*QSTYLPLVCQNTES Trigger: GCTTTCTGTATTCTGGCACACCAGGGGCAGATATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACTAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS GCA 72 bp | AGTAAACACTGGTTGTTATTGTCAGAAGTGTTATGCTaGCTTGCAAAGCACATATCTGCCCCTGGTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SKHWLLLSEVLC*LAKHISAPGVP Trigger: TGGCACACCAGGGGCAGATATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS GCA 72 bp | CCTAGTAAACACTGGTTGTTATTGTCAGAAGTGTTATaGTGCCTTGCAAAGCACATATCTGCCCCTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: PSKHWLLLSEVL*CLAKHISAPGV Trigger: CACACCAGGGGCAGATATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS TCA 72 bp | CCCTGCAGCAGGCTGATAACCCACAGGATATCTCCTTaGAGTCTATGTGATTGTCACGATTTTCATCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: PCSRLITHRISP*SLCDCHDFHQK Trigger: CTTTTGATGAAAATCGTGACAATCACATAGACTTCAAGGAGATATCCTGTGGGTTATCAGCCTGCTGCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS TCA 72 bp | GTTACTAGTGGCTGGTTATCAATTGCTCCTGGCTTCTaGGGATTAAGGTGCAAAAGGATATTCCCATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VTSGWLSIAPGF*GLRCKRIFPLA Trigger: AGCCAATGGGAATATCCTTTTGCACCTTAATCCTCAGAAGCCAGGAGCAATTGATAACCAGCCACTAGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CAA 90 bp | AATTACAACAGGGCTGGCATCATATTTGACATATTCTTTCCACTGTaGCCACCACTGCATGGAGATGATAAACCAATTGTGTCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: NYNRAGIIFDIFFPL*PPLHGDDKPIVSWL Trigger: CAGCCAGGACACAATTGGTTTATCATCTCCATGCAGTGGTGGCAACAGTGGAAAGAATATGTCAAATATGATGCCAGCCCTGTTGTAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CAA 90 bp | TGCAAAAGGATATTCCCATTGGCTCCTAGTAAACACTGGTTGTTATaGTCAGAAGTGTTATGCTGCCTTGCAAAGCACATATCTGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: CKRIFPLAPSKHWLL*SEVLCCLAKHISAP Trigger: AGGGGCAGATATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACTAGGAGCCAATGGGAATATCCTTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CAA 90 bp | TTAAGGTGCAAAAGGATATTCCCATTGGCTCCTAGTAAACACTGGTaGTTATTGTCAGAAGTGTTATGCTGCCTTGCAAAGCACATATCT | + |
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Preference number: 6 (lower is better) Translates to: LRCKRIFPLAPSKHW*LLSEVLCCLAKHIS Trigger: AGATATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACTAGGAGCCAATGGGAATATCCTTTTGCACCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CAA 72 bp | ATATTCCCATTGGCTCCTAGTAAACACTGGTTGTTATaGTCAGAAGTGTTATGCTGCCTTGCAAAGCACATA | + |
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Preference number: 6 (lower is better) Translates to: IFPLAPSKHWLL*SEVLCCLAKHI Trigger: TATGTGCTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACTAGGAGCCAATGGGAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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| CDS CAA 72 bp | AAAAGGATATTCCCATTGGCTCCTAGTAAACACTGGTaGTTATTGTCAGAAGTGTTATGCTGCCTTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KRIFPLAPSKHW*LLSEVLCCLAK Trigger: CTTTGCAAGGCAGCATAACACTTCTGACAATAACAACCAGTGTTTACTAGGAGCCAATGGGAATATCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108075.9 |
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