RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP31 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063317

Ensembl transcript IDs: ENSMUST00000046929.7

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTaGGGATACTGGGGATCTCAGGGAATTCTCCAGAATGGCCTGGGG +
Preference number: 1 (lower is better)
Translates to: NGIKSLGAAQAFQVP*GYWGSQGILQNGLG
Trigger: CCCCAGGCCATTCTGGAGAATTCCCTGAGATCCCCAGTATCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 90 bp CGCTGCAGAGTTCATAGCAGCAGAGAGCTCGGCTCTGGGAGGCTGTaGCAAAGCTGTCCCAGCTCTGATGTTTTCCTGATAGCCTTAAAA +
Preference number: 1 (lower is better)
Translates to: RCRVHSSRELGSGRL*QSCPSSDVFLIALK
Trigger: TTTTAAGGCTATCAGGAAAACATCAGAGCTGGGACAGCTTTGGCACAGCCTCCCAGAGCCGAGCTCTCTGCTGCTATGAACTCTGCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 90 bp CTACTGGAAAGCAGTCAAAAGGAAGACTGGCACCAGGATCCACACTaGATGTATAGCGCTCAGCCTCACCCCACATCAACAGACCATCAG +
Preference number: 1 (lower is better)
Translates to: LLESSQKEDWHQDPH*MYSAQPHPTSTDHQ
Trigger: CTGATGGTCTGTTGATGTGGGGTGAGGCTGAGCGCTATACATGCAGTGTGGATCCTGGTGCCAGTCTTCCTTTTGACTGCTTTCCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 90 bp ATTCATCGCGCTGTTGGTTGGTGCTGTGTGTCTCCTGGGAATGACTaGCCTACCAGGCTAAGCAGAAACTCTGACCTACCATCTGAGTTT +
Preference number: 1 (lower is better)
Translates to: IHRAVGWCCVSPGND*PTRLSRNSDLPSEF
Trigger: AAACTCAGATGGTAGGTCAGAGTTTCTGCTTAGCCTGGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCGATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 90 bp GCTCTCCGGACGTTAGCTGGACAGGATTTACCAGCTTGTTTCCGTTaGCAACGATCACTCCTTGACACTGACTTGGTATCTTCCAGGACA +
Preference number: 1 (lower is better)
Translates to: ALRTLAGQDLPACFR*QRSLLDTDLVSSRT
Trigger: TGTCCTGGAAGATACCAAGTCAGTGTCAAGGAGTGATCGTTGTCAACGGAAACAAGCTGGTAAATCCTGTCCAGCTAACGTCCGGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 90 bp CAGAGAGCTCGGCTCTGGGAGGCTGTGCCAAAGCTGTCCCAGCTCTaGTGTTTTCCTGATAGCCTTAAAATACGGACCATGTCAGATAAA +
Preference number: 1 (lower is better)
Translates to: QRARLWEAVPKLSQL*CFPDSLKIRTMSDK
Trigger: TTTATCTGACATGGTCCGTATTTTAAGGCTATCAGGAAAACATCAGAGCTGGGACAGCTTTGGCACAGCCTCCCAGAGCCGAGCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 90 bp CTGACACCTTTTCATTTTCTTGTCCAGAGCAACTGGAGCTCTTCCTaGGTGCCCTGCATGGCAGTGATGATTCTCACCGTAAACTGTTGG +
Preference number: 1 (lower is better)
Translates to: LTPFHFLVQSNWSSS*VPCMAVMILTVNCW
Trigger: CCAACAGTTTACGGTGAGAATCATCACTGCCATGCAGGGCACTCAGGAAGAGCTCCAGTTGCTCTGGACAAGAAAATGAAAAGGTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 90 bp AGAGTAGACATAAATAAGCTACTGGAAAGCAGTCAAAAGGAAGACTaGCACCAGGATCCACACTGCATGTATAGCGCTCAGCCTCACCCC +
Preference number: 1 (lower is better)
Translates to: RVDINKLLESSQKED*HQDPHCMYSAQPHP
Trigger: GGGGTGAGGCTGAGCGCTATACATGCAGTGTGGATCCTGGTGCCAGTCTTCCTTTTGACTGCTTTCCAGTAGCTTATTTATGTCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 90 bp AACGATCACTCCTTGACACTGACTTGGTATCTTCCAGGACACAAGTaGTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTGGGCCCAAAT +
Preference number: 1 (lower is better)
Translates to: NDHSLTLTWYLPGHK*SSFLLASVCKVGPN
Trigger: ATTTGGGCCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGATACCAAGTCAGTGTCAAGGAGTGATCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 90 bp ATGGGCCTGAACTCAATTTTAACCAGTGGTGAGAGGCACAGTTGGTaGGCAAAGCTACACAACACAAATGCCTACAGGAAAACCCAACAG +
Preference number: 1 (lower is better)
Translates to: MGLNSILTSGERHSW*AKLHNTNAYRKTQQ
Trigger: CTGTTGGGTTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCACCACTGGTTAAAATTGAGTTCAGGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 90 bp CTGAGTTTGGCCCCAAAGTACACATGTTCACTGTGCCCAAATCACTaGGAGAAAGATTTTAATAACCAAGTCCCTAACCCTGCCTCAGAA +
Preference number: 1 (lower is better)
Translates to: LSLAPKYTCSLCPNH*EKDFNNQVPNPASE
Trigger: TTCTGAGGCAGGGTTAGGGACTTGGTTATTAAAATCTTTCTCCCAGTGATTTGGGCACAGTGAACATGTGTACTTTGGGGCCAAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 90 bp CACTTTCTTCCAGCCTGCAGGAAGGATACTCTGCCGTCCTTTTACTaGAAAATTAAACTTATACAGAGCTCACTAATGGTGGCTCGTGAA +
Preference number: 1 (lower is better)
Translates to: HFLPACRKDTLPSFY*KIKLIQSSLMVARE
Trigger: TTCACGAGCCACCATTAGTGAGCTCTGTATAAGTTTAATTTTGCAGTAAAAGGACGGCAGAGTATCCTTCCTGCAGGCTGGAAGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 90 bp TCCACAAGCCTTGGAAAAGTGTCTTCTTTATCTGTGAGAATTCAGTaGGGTGCCCTTCTCATACATAAGAATGTAATTTGTAACTACATG +
Preference number: 1 (lower is better)
Translates to: STSLGKVSSLSVRIQ*GALLIHKNVICNYM
Trigger: CATGTAGTTACAAATTACATTCTTATGTATGAGAAGGGCACCTCACTGAATTCTCACAGATAAAGAAGACACTTTTCCAAGGCTTGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 90 bp GTTAAAGCAAGGTGGAAGGGTGATTTAAGGAATGATGTAGCCTCATaGACACAATGTTTACAGGAAAAGAGAGCAAGAATAAAAAGGATT +
Preference number: 1 (lower is better)
Translates to: VKARWKGDLRNDVAS*TQCLQEKRARIKRI
Trigger: AATCCTTTTTATTCTTGCTCTCTTTTCCTGTAAACATTGTGTGCATGAGGCTACATCATTCCTTAAATCACCCTTCCACCTTGCTTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 90 bp TCCACTCCTGCTTGCAAAATACTATTTTATACACAATCTTACCAATaGCCAAGGAGATTGGCGAAGAAATATATGCAAAGCAACCTAAAC +
Preference number: 1 (lower is better)
Translates to: STPACKILFYTQSYQ*PRRLAKKYMQSNLN
Trigger: GTTTAGGTTGCTTTGCATATATTTCTTCGCCAATCTCCTTGGTCATTGGTAAGATTGTGTATAAAATAGTATTTTGCAAGCAGGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 90 bp GAAATGAGCTTTGCTCATAACTCTTTAATCCACATTCCCTTAAACTaGCACTACTGCTCCCTTTACATACCAACCCTATTAGTTTTATTA +
Preference number: 1 (lower is better)
Translates to: EMSFAHNSLIHIPLN*HYCSLYIPTLLVLL
Trigger: TAATAAAACTAATAGGGTTGGTATGTAAAGGGAGCAGTAGTGGCAGTTTAAGGGAATGTGGATTAAAGAGTTATGAGCAAAGCTCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGATTTGGGAAGCCACAATaGGGCATGGGGACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGFGKPQ*GMGTGG
Trigger: TCCTCCTGTCCCCATGCCCCATTGTGGCTTCCCAAA...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGACTGACGCCGGTAGGTaGGAAGCTCCCAAATCTTCC +
Preference number: 2 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLTDAGR*EAPKSS
Trigger: GGAAGATTTGGGAGCTTCCCACCTACCGGCGTCAGT...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGAGGGAATTCTCCAGAATaGCCTGGGGAGAGTCTACAC +
Preference number: 2 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGGNSPE*PGESLH
Trigger: GTGTAGACTCTCCCCAGGCCATTCTGGAGAATTCCC...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGAGCTGGACGGTGGGCATaGACAATTGTTTTCCTTACA +
Preference number: 2 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGAGRWA*TIVFLT
Trigger: TGTAAGGAAAACAATTGTGCATGCCCACCGTCCAGC...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR TCA 90 bp TCTTCCAGGACACAAGTGCTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTGGGTGTGTCTCCTGGGAATaGCTGCCCTACCAGGCTAAG +
Preference number: 2 (lower is better)
Translates to: SSRTQVLKLSACLCMQSGCVSWE*LPYQAK
Trigger: CTTAGCCTGGTAGGGCAGTCATTCCCAGGAGACACA...CCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp CGCGCTGTTGGTTGGTGCTGTGTGTCTCCTGGGAATGACTGCCCTACCAGGCTAATAAAACAAGATTGGTaGCTAAACTCAAGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: RAVGWCCVSPGNDCPTRLIKQDW*LNSSRA
Trigger: AGCCCTGCTTGAGTTTAGCCACCAATCTTGTTTTAT...TAGCCTGGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp TCTTCCAGGACACAAGTGCTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTGGGAGTCAAAAGGAAGACTaGCACCAGGATCCACACTGC +
Preference number: 2 (lower is better)
Translates to: SSRTQVLKLSACLCMQSGSQKED*HQDPHC
Trigger: GCAGTGTGGATCCTGGTGCCAGTCTTCCTTTTGACT...CCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 90 bp TTCCTGAGTGCCCTGCATGGCAGTGATGATTCTCACCGTAAACTGTaGGCAAAAAGATGGTGTACCCACATCCTTCAGTTCTCACCGCAA +
Preference number: 2 (lower is better)
Translates to: FLSALHGSDDSHRKL*AKRWCTHILQFSPQ
Trigger: TTGCGGTGAGAACTGAAGGATGTGGGTACACCATCTTTTTGCCAACAGTTTACGGTGAGAATCATCACTGCCATGCAGGGCACTCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR TCA 90 bp AGCCTCACCCCACATCAACAGACCATCAGTAGCTCTTGGCAAGAGGCAACTTCTCCACCCTGGACTAGCTaGGTATATATACCTGAGAAA +
Preference number: 2 (lower is better)
Translates to: SLTPHQQTISSSWQEATSPPWTS*VYIPEK
Trigger: TTTCTCAGGTATATATACTCAGCTAGTCCAGGGTGG...AGAAGTTGCCTCTTGCCAAGAGCTACTGATGGTCTGTTGATGTGGGGTGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAAGCATTCCAAGTCCCTTaGGGATACTGGGGATCTCAG +
Preference number: 2 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKAFQVP*GYWGSQ
Trigger: CTGAGATCCCCAGTATCCCCAAGGGACTTGGAATGC...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR TCA 90 bp TCTTCCAGGACACAAGTGCTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTGGGTGTCTTCTTTATCTGTaGGAATTCAGTGAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: SSRTQVLKLSACLCMQSGCLLYL*EFSEVP
Trigger: GGGCACCTCACTGAATTCTCACAGATAAAGAAGACA...CCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR TCA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAAAAACAGCTTGGGGTCTaGTCAAAAGGCAGCATGGGA +
Preference number: 2 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKKQLGV*SKGSMG
Trigger: TCCCATGCTGCCTTTTGATCAGACCCCAAGCTGTTT...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAAAAAGCAAGAGCAGCCTaGACACTAGCAGCTAGGTTG +
Preference number: 2 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKKARAA*TLAARL
Trigger: CAACCTAGCTGCTAGTGTGCAGGCTGCTCTTGCTTT...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCTCCTATCCCTGCCCCTaGCCCATGGGAAACAATAGT +
Preference number: 2 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSSYPCP*PMGNNS
Trigger: ACTATTGTTTCCCATGGGGCAGGGGCAGGGATAGGA...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAAAGCCACAATGGGGCATaGGGACAGGAGGAGTATAAA +
Preference number: 2 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKSHNGA*GQEEYK
Trigger: TTTATACTCCTCCTGTCCCCATGCCCCATTGTGGCT...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp TCTTCCAGGACACAAGTGCTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTGGGAGAGCTTTAATGCTTTaGGAAGCCACAATGGGGCAT +
Preference number: 2 (lower is better)
Translates to: SSRTQVLKLSACLCMQSGRALML*EATMGH
Trigger: ATGCCCCATTGTGGCTTCCCAAAGCATTAAAGCTCT...CCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTCATCGCGCTGTTGGTTaGTGCTGTGTGTCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: HYLCIQRQPTEETVTSASHRAVG*CCVSPG
Trigger: CCCAGGAGACACACAGCACCAACCAACAGCGCGATG...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCAATTCATCGCGCTGTTaGTTGGTGCTGTGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSNSSRC*LVLCVS
Trigger: GGAGACACACAGCACCAACCAACAGCGCGATGAATT...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 90 bp GATTTTTATTTAACAGCAAAACAACATTACCAATTCATCGCGCTGTaGGTTGGTGCTGTGTGTCTCCTGGGAATGACTGCCCTACCAGGC +
Preference number: 2 (lower is better)
Translates to: DFYLTAKQHYQFIAL*VGAVCLLGMTALPG
Trigger: GCCTGGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCGATGAATTGGTAATGTTGTTTTGCTGTTAAATAAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR TCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAAGGCCAGGGTCTCAAGTaGCAGGAGCATATGAGCTTT +
Preference number: 2 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKGQGLK*QEHMSF
Trigger: AAAGCTCATATGCTCCTGTCACTTGAGACCCTGGCC...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp AGCCTCACCCCACATCAACAGACCATCAGTAGCTCTTGGCAAGAGGCAACTTCTTTAGCTTGGTATCAATaGTTTGCCTATGGCTGTTAT +
Preference number: 2 (lower is better)
Translates to: SLTPHQQTISSSWQEATSLAWYQ*FAYGCY
Trigger: ATAACAGCCATAGGCAAAGCATTGATACCAAGCTAA...AGAAGTTGCCTCTTGCCAAGAGCTACTGATGGTCTGTTGATGTGGGGTGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTCGCGCTGTTGGTTGGTaGTGTGTGTCTCCTGGGAAT +
Preference number: 2 (lower is better)
Translates to: HYLCIQRQPTEETVTSASRAVGW*CVSPGN
Trigger: ATTCCCAGGAGACACACAGCACCAACCAACAGCGCG...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCCTCAAGCTTTCTGCTTaGCTCTGTATGCAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSLKLSA*LCMQSG
Trigger: CCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAG...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp GATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCACAACAAAGACTGGTAGATaGGGCCAAAGTGCAGAAAGC +
Preference number: 2 (lower is better)
Translates to: DKLFVGSLMLNGMRTHSTTKTGR*GQSAES
Trigger: GCTTTCTGCACTTTGGCCCCATCTACCAGTCTTTGT...TGTGCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR TCA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAAATGTCACCTTCCTCTTaGATCCATCTATTAGTAACG +
Preference number: 2 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKMSPSS*IHLLVT
Trigger: CGTTACTAATAGATGGATTCAAGAGGAAGGTGACAT...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp TCAGTCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTGGGAAGCCACAATGATTTCCACAAGCCTTaGAAAAGTGTCTTCTTTATC +
Preference number: 2 (lower is better)
Translates to: SVTPRQDRESFNALGSHNDFHKP*KSVFFI
Trigger: GATAAAGAAGACACTTTTCCAAGGCTTGTGGAAATC...ATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTTCTCCGGACGTTAGCTaGACAGGATTTACCAGCTTG +
Preference number: 2 (lower is better)
Translates to: HYLCIQRQPTEETVTSASSPDVS*TGFTSL
Trigger: CAAGCTGGTAAATCCTGTCCAGCTAACGTCCGGAGA...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCCACCAGGATCCACACTaGATGTATAGCGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCHQDPH*MYSAQP
Trigger: AGGCTGAGCGCTATACATGCAGTGTGGATCCTGGTG...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAATACTTACCCTCAAGCTaGTTTTCATGCCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKYLPSS*FSCQQE
Trigger: TTCCTGCTGGCATGAAAAGCAGCTTGAGGGTAAGTA...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 90 bp GGACTAGCTGAGTATATATACCTGAGAAACATTAGTGTTAAGATATaGCCCTTACAAAGACTGGTAGATGGGGCCAAAGTGCAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: GLAEYIYLRNISVKI*PLQRLVDGAKVQKA
Trigger: TGCTTTCTGCACTTTGGCCCCATCTACCAGTCTTTGTAAGGGCAATATCTTAACACTAATGTTTCTCAGGTATATATACTCAGCTAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR TCA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCACACTTTTAACAATTTaGACTCCACACACACACTCA +
Preference number: 2 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSTLLTI*TPHTHS
Trigger: TGAGTGTGTGTGTGGAGTTCAAATTGTTAAAAGTGT...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTGACTCTGTTTCTGAATaGTGGGTCAGAGATTACCTC +
Preference number: 2 (lower is better)
Translates to: HYLCIQRQPTEETVTSASDSVSE*WVRDYL
Trigger: GAGGTAATCTCTGACCCAGCATTCAGAAACAGAGTC...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTTGCCAGGGGAACACATaGATTCAGACTCTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFCQGNT*IQTLFL
Trigger: CAGAAACAGAGTCTGAATGCATGTGTTCCCCTGGCA...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp GATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCACAAATGATGTAGCCTCATaGACACAATGTTTACAGGAA +
Preference number: 2 (lower is better)
Translates to: DKLFVGSLMLNGMRTHSTNDVAS*TQCLQE
Trigger: TTCCTGTAAACATTGTGTGCATGAGGCTACATCATT...TGTGCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAATTATTCCAGTTAGCTTaGTATCAATGCTTTGCCTAT +
Preference number: 2 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKLFQLA*YQCFAY
Trigger: ATAGGCAAAGCATTGATACCAAGCTAACTGGAATAA...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCGTTGTTAAAGCAAGGTaGAAGGGTGATTTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSVVKAR*KGDLRN
Trigger: ATTCCTTAAATCACCCTTCCACCTTGCTTTAACAAC...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTGATCAAAAGGCAGCATaGGACATCAAGCCATCACAG +
Preference number: 2 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFDQKAA*DIKPSQ
Trigger: CTGTGATGGCTTGATGTCCCATGCTGCCTTTTGATC...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp GATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCACACGTAGTTTCTCTGTATaGTTTTTAATCAGTTGCTTG +
Preference number: 2 (lower is better)
Translates to: DKLFVGSLMLNGMRTHSTRSFSV*FLISCL
Trigger: CAAGCAACTGATTAAAAAGCATACAGAGAAACTACG...TGTGCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCTGTCCAATCCACTCCTaGTTGCAAAATACTATTTTA +
Preference number: 2 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSCPIHS*LQNTIL
Trigger: TAAAATAGTATTTTGCAAGCAGGAGTGGATTGGACA...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTTTACACACACTGAACTaGGTAGACAGCATTGTGGTA +
Preference number: 2 (lower is better)
Translates to: HYLCIQRQPTEETVTSASLHTLN*VDSIVV
Trigger: TACCACAATGCTGTCTACCCAGTTCAGTGTGTGTAA...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp AGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTGCATTACACATGTTCACTGTaGCCAAATCACTGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: RRNVSRSFSVCFLISCLHYTCSL*PNHWEK
Trigger: TTTCTCCCAGTGATTTGGGCACAGTGAACATGTGTA...ATGCAAGCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCAGTGCTCAAGCTTTCTaGTTGCCTCTGTATGCAAAG +
Preference number: 2 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCSAQAF*LPLYAK
Trigger: CTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACT...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTCCTATGGCTGTTATTTaGTTCAATGGCAGAATAAGG +
Preference number: 2 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTPMAVI*FNGRIR
Trigger: CCTTATTCTGCCATTGAACCAAATAACAGCCATAGG...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTTCAATGCTTTGCCTATaGCTGTTATTTGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: HYLCIQRQPTEETVTSASSMLCL*LLFGSM
Trigger: CATTGAACCAAATAACAGCCATAGGCAAAGCATTGA...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 90 bp AGTATATACACCAGTGTATGTTCAACATGTCCAATCCACTCCTGCTaGCAAAATACTATTTTATACACAATCTTACCAATGACCAAGGAG +
Preference number: 2 (lower is better)
Translates to: SIYTSVCSTCPIHSC*QNTILYTILPMTKE
Trigger: CTCCTTGGTCATTGGTAAGATTGTGTATAAAATAGTATTTTGCAAGCAGGAGTGGATTGGACATGTTGAACATACACTGGTGTATATACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR GCA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCAAAATCAAAACTGCATaGACATATGCACTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCKIKTA*TYALQS
Trigger: GGACTGCAGTGCATATGTGCATGCAGTTTTGATTTT...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 90 bp CTAAAGGGACTATTCAGATTATTTTCTACAATTATTCCAGTTAGCTaGGTATCAATGCTTTGCCTATGGCTGTTATTTGGTTCAATGGCA +
Preference number: 2 (lower is better)
Translates to: LKGLFRLFSTIIPVS*VSMLCLWLLFGSMA
Trigger: TGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATACCAAGCTAACTGGAATAATTGTAGAAAATAATCTGAATAGTCCCTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp AGGAGGCCCAGTGCTGCCTGTGGGTTACACCGGTGCTaGCAGAGCAGGGCAGGGTTTGCAAGGCTAGGCAGG +
Preference number: 3 (lower is better)
Translates to: RRPSAACGLHRC*QSRAGFARLGR
Trigger: CCTGCCTAGCCTTGCAAACCCTGCCCTGCTCTGGCAGCACCGGTGTAACCCACAGGCAGCACTGGGCCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp CCTAGAGGGAGTGAACCTGAGCAGGAGGCCCAGTGCTaGCTGTGGGTTACACCGGTGCTGCCAGAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: PRGSEPEQEAQC*LWVTPVLPEQG
Trigger: GCCCTGCTCTGGCAGCACCGGTGTAACCCACAGGCAGCACTGGGCCTCCTGCTCAGGTTCACTCCCTCTAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp GGGAGTGAACCTGAGCAGGAGGCCCAGTGCTGCCTGTaGGTTACACCGGTGCTGCCAGAGCAGGGCAGGGTT +
Preference number: 3 (lower is better)
Translates to: GSEPEQEAQCCL*VTPVLPEQGRV
Trigger: AACCCTGCCCTGCTCTGGCAGCACCGGTGTAACCCACAGGCAGCACTGGGCCTCCTGCTCAGGTTCACTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp AGACCTAGAGGGAGTGAACCTGAGCAGGAGGCCCAGTaGTGCCTGTGGGTTACACCGGTGCTGCCAGAGCAG +
Preference number: 3 (lower is better)
Translates to: RPRGSEPEQEAQ*CLWVTPVLPEQ
Trigger: CTGCTCTGGCAGCACCGGTGTAACCCACAGGCAGCACTGGGCCTCCTGCTCAGGTTCACTCCCTCTAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp GGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGATACTaGGGATCTCAGGGAATTCTCCAGAATGGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: GAAQAFQVPWGY*GSQGILQNGLG
Trigger: CCCCAGGCCATTCTGGAGAATTCCCTGAGATCCCCAGTATCCCCAAGGGACTTGGAATGCCTGGGCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp AAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTaGGGATACTGGGGATCTCAGGGAATTCTCCAGAAT +
Preference number: 3 (lower is better)
Translates to: KSLGAAQAFQVP*GYWGSQGILQN
Trigger: ATTCTGGAGAATTCCCTGAGATCCCCAGTATCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp TGTCAGCCCCAGAGTAGAATCTGGAGAGAGGCTGTGTaGATTAATTCAGACCCCTCAGGGCACTCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: CQPQSRIWREAV*INSDPSGHSAC
Trigger: GCAGGCAGAGTGCCCTGAGGGGTCTGAATTAATTCACACAGCCTCTCTCCAGATTCTACTCTGGGGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp GCTGTTGGTTGGTGCTGTGTGTCTCCTGGGAATGACTaGCCTACCAGGCTAAGCAGAAACTCTGACCTACCA +
Preference number: 3 (lower is better)
Translates to: AVGWCCVSPGND*PTRLSRNSDLP
Trigger: TGGTAGGTCAGAGTTTCTGCTTAGCCTGGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp TCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTaGGAAGCCACAATGGGGCATGGGGACAGGAGGAGT +
Preference number: 3 (lower is better)
Translates to: SHQGRTERALML*EATMGHGDRRS
Trigger: ACTCCTCCTGTCCCCATGCCCCATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp CGGCTCTGGGAGGCTGTGCCAAAGCTGTCCCAGCTCTaGTGTTTTCCTGATAGCCTTAAAATACGGACCATG +
Preference number: 3 (lower is better)
Translates to: RLWEAVPKLSQL*CFPDSLKIRTM
Trigger: CATGGTCCGTATTTTAAGGCTATCAGGAAAACATCAGAGCTGGGACAGCTTTGGCACAGCCTCCCAGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp AGCAGTCAAAAGGAAGACTGGCACCAGGATCCACACTaGATGTATAGCGCTCAGCCTCACCCCACATCAACA +
Preference number: 3 (lower is better)
Translates to: SSQKEDWHQDPH*MYSAQPHPTST
Trigger: TGTTGATGTGGGGTGAGGCTGAGCGCTATACATGCAGTGTGGATCCTGGTGCCAGTCTTCCTTTTGACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGACATCATCTGAGGAGTaGTTAAAGCAAGGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLTSSEE*LKQGGR
Trigger: CCTTCCACCTTGCTTTAACAACTCCTCAGATGATGT...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp ACATCCCACATGCTTTCTCTTACTGACGCCGGTAGGTaGGAAGCTCCCAAATCTTCCTTAGCAGCTCCAAGT +
Preference number: 3 (lower is better)
Translates to: TSHMLSLTDAGR*EAPKSSLAAPS
Trigger: ACTTGGAGCTGCTAAGGAAGATTTGGGAGCTTCCCACCTACCGGCGTCAGTAAGAGAAAGCATGTGGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp AAAACAACATTACCAATTCATCGCGCTGTTGGTTGGTaGTGTGTGTCTCCTGGGAATGACTGCCCTACCAGG +
Preference number: 3 (lower is better)
Translates to: KTTLPIHRAVGW*CVSPGNDCPTR
Trigger: CCTGGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCGATGAATTGGTAATGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp AGCAAAACAACATTACCAATTCATCGCGCTGTTGGTTaGTGCTGTGTGTCTCCTGGGAATGACTGCCCTACC +
Preference number: 3 (lower is better)
Translates to: SKTTLPIHRAVG*CCVSPGNDCPT
Trigger: GGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCGATGAATTGGTAATGTTGTTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp CATGCCAGGGGAACACATGCATTCAGACTCTGTTTCTaGATGCTGGGTCAGAGATTACCTCTTCAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: HARGTHAFRLCF*MLGQRLPLQSR
Trigger: TCTGCTCTGAAGAGGTAATCTCTGACCCAGCATTCAGAAACAGAGTCTGAATGCATGTGTTCCCCTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp ATGATTAAAGGAGGATTCCATGTGATCAAGGCAACCTaGTGGCTGCACAACTGTGGCACCGCACAGCTCTTT +
Preference number: 3 (lower is better)
Translates to: MIKGGFHVIKAT*WLHNCGTAQLF
Trigger: AAAGAGCTGTGCGGTGCCACAGTTGTGCAGCCATCAGGTTGCCTTGATCACATGGAATCCTCCTTTAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp TTTCATTTTCTTGTCCAGAGCAACTGGAGCTCTTCCTaGGTGCCCTGCATGGCAGTGATGATTCTCACCGTA +
Preference number: 3 (lower is better)
Translates to: FHFLVQSNWSSS*VPCMAVMILTV
Trigger: TACGGTGAGAATCATCACTGCCATGCAGGGCACTCAGGAAGAGCTCCAGTTGCTCTGGACAAGAAAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp CAATGGGATGAGGACACACAGCACAGTGGATTATTCTaGAGATGGTATAGTGTGCCTGGCTCACCACAGACT +
Preference number: 3 (lower is better)
Translates to: QWDEDTQHSGLF*RWYSVPGSPQT
Trigger: AGTCTGTGGTGAGCCAGGCACACTATACCATCTTCAGAATAATCCACTGTGCTGTGTGTCCTCATCCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp TGGCCAGGGTCTCAAGTGACAGGAGCATATGAGCTTTaGCCTTCCACATCATCTGAGGAGTTGTTAAAGCAA +
Preference number: 3 (lower is better)
Translates to: WPGSQVTGAYEL*PSTSSEELLKQ
Trigger: TTGCTTTAACAACTCCTCAGATGATGTGGAAGGGCAAAGCTCATATGCTCCTGTCACTTGAGACCCTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp AGTTTAGAGGGACTGACAATGCCTCCCATCCCTCAATaGTCTCCACATCCATCCATACAGAGGGTTAATGTG +
Preference number: 3 (lower is better)
Translates to: SLEGLTMPPIPQ*SPHPSIQRVNV
Trigger: CACATTAACCCTCTGTATGGATGGATGTGGAGATCATTGAGGGATGGGAGGCATTGTCAGTCCCTCTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp TCCTTGACACTGACTTGGTATCTTCCAGGACACAAGTaGTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTG +
Preference number: 3 (lower is better)
Translates to: SLTLTWYLPGHK*SSFLLASVCKV
Trigger: CACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGATACCAAGTCAGTGTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp CCCTGCATGGCAGTGATGATTCTCACCGTAAACTGTTaGCAAAAAGATGGTGTACCCACATCCTTCAGTTCT +
Preference number: 3 (lower is better)
Translates to: PCMAVMILTVNC*QKDGVPTSFSS
Trigger: AGAACTGAAGGATGTGGGTACACCATCTTTTTGCCAACAGTTTACGGTGAGAATCATCACTGCCATGCAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAAGACAACGATCACTCCTaGACACTGACTTGGTATCTT +
Preference number: 3 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKDNDHS*TLTWYL
Trigger: AAGATACCAAGTCAGTGTCAAGGAGTGATCGTTGTC...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp CTGCTTGCCTCTGTATGCAAAGTGGGCCCAAATGGATaGATGATTAAAGGAGGATTCCATGTGATCAAGGCA +
Preference number: 3 (lower is better)
Translates to: LLASVCKVGPNG*MIKGGFHVIKA
Trigger: TGCCTTGATCACATGGAATCCTCCTTTAATCATTCATCCATTTGGGCCCACTTTGCATACAGAGGCAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp ACGTTAGCTGGACAGGATTTACCAGCTTGTTTCCGTTaGCAACGATCACTCCTTGACACTGACTTGGTATCT +
Preference number: 3 (lower is better)
Translates to: TLAGQDLPACFR*QRSLLDTDLVS
Trigger: AGATACCAAGTCAGTGTCAAGGAGTGATCGTTGTCAACGGAAACAAGCTGGTAAATCCTGTCCAGCTAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAAGAGAGCTTTAATGCTTaGGGAAGCCACAATGGGGCA +
Preference number: 3 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKESFNA*GSHNGA
Trigger: TGCCCCATTGTGGCTTCCCAAAGCATTAAAGCTCTC...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAACCCAGAACACTATCTTaGTATTCAACGACAACCTAC +
Preference number: 3 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKPRTLS*YSTTTY
Trigger: GTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGG...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp GTCCCACCTGAAAGGTGCAGTCAGGTTAAACATCAATaGACCCTTTATAAACTAAAGCAAGAGCAGCCTGCA +
Preference number: 3 (lower is better)
Translates to: VPPERCSQVKHQ*TLYKLKQEQPA
Trigger: TGCAGGCTGCTCTTGCTTTAGTTTATAAAGGGTTCATTGATGTTTAACCTGACTGCACCTTTCAGGTGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp CCAGCCTGCAGGAAGGATACTCTGCCGTCCTTTTACTaGAAAATTAAACTTATACAGAGCTCACTAATGGTG +
Preference number: 3 (lower is better)
Translates to: PACRKDTLPSFY*KIKLIQSSLMV
Trigger: CACCATTAGTGAGCTCTGTATAAGTTTAATTTTGCAGTAAAAGGACGGCAGAGTATCCTTCCTGCAGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp TGCAGTCCCTTCACAGAAATACTGAAGAGTGAGGCCTaGGAACCACGAGCCTTAGAATTTAGTAACTACAAA +
Preference number: 3 (lower is better)
Translates to: CSPFTEILKSEA*EPRALEFSNYK
Trigger: TTTGTAGTTACTAAATTCTAAGGCTCGTGGTTCCCAGGCCTCACTCTTCAGTATTTCTGTGAAGGGACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp GATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCACACTTGGTATCAATGCTTaGCCTATGGCTGTTATTTGG +
Preference number: 3 (lower is better)
Translates to: DKLFVGSLMLNGMRTHSTLGINA*PMAVIW
Trigger: CCAAATAACAGCCATAGGCAAAGCATTGATACCAAG...TGTGCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp TACTACAAAAGCTCAAAGTTCCAGCCACCCTCAACCTaGAAGCTACCAGCTAATGTTAACATTAGCAGCAAA +
Preference number: 3 (lower is better)
Translates to: YYKSSKFQPPST*KLPANVNISSK
Trigger: TTTGCTGCTAATGTTAACATTAGCTGGTAGCTTGCAGGTTGAGGGTGGCTGGAACTTTGAGCTTTTGTAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp AGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTGCATGCTCAAGCTTTCTGCTaGCCTCTGTATGCAAAGTGG +
Preference number: 3 (lower is better)
Translates to: RRNVSRSFSVCFLISCLHAQAFC*PLYAKW
Trigger: CCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGC...ATGCAAGCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp CATCTGAGTTTGGCCCCAAAGTACACATGTTCACTGTaGCCAAATCACTGGGAGAAAGATTTTAATAACCAA +
Preference number: 3 (lower is better)
Translates to: HLSLAPKYTCSL*PNHWEKDFNNQ
Trigger: TTGGTTATTAAAATCTTTCTCCCAGTGATTTGGGCACAGTGAACATGTGTACTTTGGGGCCAAACTCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp CTTCTGATGCCACTCAACAATCCACATGAAGATAAATTCTGCTCAGATGAAACCGCCTATGGCTGTTATTaGGTTCAATGGCAGAATAAG +
Preference number: 3 (lower is better)
Translates to: LLMPLNNPHEDKFCSDETAYGCY*VQWQNK
Trigger: CTTATTCTGCCATTGAACCAAATAACAGCCATAGGC...GGTTTCATCTGAGCAGAATTTATCTTCATGTGGATTGTTGAGTGGCATCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp AGGTGGAAGGGTGATTTAAGGAATGATGTAGCCTCATaGACACAATGTTTACAGGAAAAGAGAGCAAGAATA +
Preference number: 3 (lower is better)
Translates to: RWKGDLRNDVAS*TQCLQEKRARI
Trigger: TATTCTTGCTCTCTTTTCCTGTAAACATTGTGTGCATGAGGCTACATCATTCCTTAAATCACCCTTCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp CATGAAGATAAATTCTGCTCAGATGAAACCCAAGGCTaGCTGTTCATCTGTCTATACACTGATAGCGTAATT +
Preference number: 3 (lower is better)
Translates to: HEDKFCSDETQG*LFICLYTDSVI
Trigger: AATTACGCTATCAGTGTATAGACAGATGAACAGTCAGCCTTGGGTTTCATCTGAGCAGAATTTATCTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp TTTGCTCATAACTCTTTAATCCACATTCCCTTAAACTaGCACTACTGCTCCCTTTACATACCAACCCTATTA +
Preference number: 3 (lower is better)
Translates to: FAHNSLIHIPLN*HYCSLYIPTLL
Trigger: TAATAGGGTTGGTATGTAAAGGGAGCAGTAGTGGCAGTTTAAGGGAATGTGGATTAAAGAGTTATGAGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTCATGTCACCTTCCTCTaGAATCCATCTATTAGTAAC +
Preference number: 3 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTHVTFL*NPSISN
Trigger: GTTACTAATAGATGGATTCAAGAGGAAGGTGACATG...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp TTTCTAACAGAAACAAGCAGCATCAGGGAAGGAAAATaGTACCAACTCAGGCTTCAGTTTGGAATAAAATTT +
Preference number: 3 (lower is better)
Translates to: FLTETSSIREGK*YQLRLQFGIKF
Trigger: AAATTTTATTCCAAACTGAAGCCTGAGTTGGTACCATTTTCCTTCCCTGATGCTGCTTGTTTCTGTTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CCA 72 bp AGCTGCAAAGTATTTCTAAGAGATTTCCACAAGCCTTaGAAAAGTGTCTTCTTTATCTGTGAGAATTCAGTG +
Preference number: 3 (lower is better)
Translates to: SCKVFLRDFHKP*KSVFFICENSV
Trigger: CACTGAATTCTCACAGATAAAGAAGACACTTTTCCAAGGCTTGTGGAAATCTCTTAGAAATACTTTGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp AGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTGCATATTATTCCAGTTAGCTaGGTATCAATGCTTTGCCTA +
Preference number: 3 (lower is better)
Translates to: RRNVSRSFSVCFLISCLHIIPVS*VSMLCL
Trigger: TAGGCAAAGCATTGATACCAAGCTAACTGGAATAAT...ATGCAAGCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR-3UTR CAA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCAGATTTCCACAAGCCTaGGAAAAGTGTCTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCRFPQA*EKCLLY
Trigger: ATAAAGAAGACACTTTTCCAAGGCTTGTGGAAATCT...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp CTTGGAAAAGTGTCTTCTTTATCTGTGAGAATTCAGTaGGGTGCCCTTCTCATACATAAGAATGTAATTTGT +
Preference number: 3 (lower is better)
Translates to: LGKVSSLSVRIQ*GALLIHKNVIC
Trigger: ACAAATTACATTCTTATGTATGAGAAGGGCACCTCACTGAATTCTCACAGATAAAGAAGACACTTTTCCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR GCA 72 bp AACTCTTTAATCCACATTCCCTTAAACTGCCACTACTaGTCCCTTTACATACCAACCCTATTAGTTTTATTA +
Preference number: 3 (lower is better)
Translates to: NSLIHIPLNCHY*SLYIPTLLVLL
Trigger: TAATAAAACTAATAGGGTTGGTATGTAAAGGGAGCAGTAGTGGCAGTTTAAGGGAATGTGGATTAAAGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR TCA 72 bp GCTTGCAAAATACTATTTTATACACAATCTTACCAATaGCCAAGGAGATTGGCGAAGAAATATATGCAAAGC +
Preference number: 3 (lower is better)
Translates to: ACKILFYTQSYQ*PRRLAKKYMQS
Trigger: GCTTTGCATATATTTCTTCGCCAATCTCCTTGGTCATTGGTAAGATTGTGTATAAAATAGTATTTTGCAAGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGTCCCCTGCTCTGGCCTaGTTCACCCGAGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLSPALA*FTRGEL
Trigger: CAGCTCCCCTCGGGTGAATCAGGCCAGAGCAGGGGA...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CGCGCTGTTGGTTGGTGCTGTGTGTCTCCTGGGAATGACTGCCCTACCAGGCTACTGGCTAGCCAAGGCTaGCCTCCCCTTGCGCATGTT +
Preference number: 4 (lower is better)
Translates to: RAVGWCCVSPGNDCPTRLLASQG*PPLAHV
Trigger: AACATGCGCAAGGGGAGGCCAGCCTTGGCTAGCCAG...TAGCCTGGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGAGCAGCGTGGCGTTCATaGAGCACGTGTTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGAAWRS*STCCRG
Trigger: ACCACGGCAACACGTGCTTCATGAACGCCACGCTGC...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp CGCTCAGCCTCACCCCACATCAACAGACCATCAGTAGCTCTTGGCAAGAGGCAACGCCATGGGGACCAATaGGATGGCAAGCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSASPHINRPSVALGKRQRHGDQ*DGKLQL
Trigger: CAGCTGGAGCTTGCCATCTCATTGGTCCCCATGGCG...TTGCCTCTTGCCAAGAGCTACTGATGGTCTGTTGATGTGGGGTGAGGCTGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGAGCGTCTGGAGGAGGCTaGAGAAGTCACACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGASGGG*RSHTGL
Trigger: CAAGCCAGTGTGACTTCTGCAGCCTCCTCCAGACGC...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGTGTTGTCCCCTGCTCTaGCCTGATTCACCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLCCPLL*PDSPEG
Trigger: CCCCTCGGGTGAATCAGGCCAGAGCAGGGGACAACA...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGATTGGGGAGTCCCCTaGGAAGCGGGAAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLDWGVP*EAGRRT
Trigger: AGTTCTCCTTCCCGCTTCTCAGGGGACTCCCCAATC...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp CGCTCAGCCTCACCCCACATCAACAGACCATCAGTAGCTCTTGGCAAGAGGCAACACACTTGTGCTAGGTaGACGCAGGCTGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RSASPHINRPSVALGKRQHTCAR*TQAGHG
Trigger: TCCATGGCCAGCCTGCGTTCACCTAGCACAAGTGTG...TTGCCTCTTGCCAAGAGCTACTGATGGTCTGTTGATGTGGGGTGAGGCTGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGACAGCTTCCCGAAGTCTaGCAACAGTCCCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGQLPEV*QQSQTE
Trigger: CTCTGTCTGGGACTGTTGCCAGACTTCGGGAAGCTG...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CGCGCTGTTGGTTGGTGCTGTGTGTCTCCTGGGAATGACTGCCCTACCAGGCTACTGCAGAAGTCACACTaGCTTGCTTGCTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RAVGWCCVSPGNDCPTRLLQKSH*LACFLG
Trigger: TCCCAGGAAGCAAGCAAGCCAGTGTGACTTCTGCAG...TAGCCTGGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGCCAAGGACGTGCGTCTaGAGGAGGCTGCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLPRTCV*RRLQKS
Trigger: TGACTTCTGCAGCCTCCTCCAGACGCACGTCCTTGG...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGAGACAGAGAAGATTCCTaGCTAGCCAAGGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGDREDS*LAKAGL
Trigger: GAGGCCAGCCTTGGCTAGCCAGGAATCTTCTCTGTC...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CGCTCAGCCTCACCCCACATCAACAGACCATCAGTAGCTCTTGGCAAGAGGCAATGTCCTGGAAGAATCTaGTTTGCTCCGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RSASPHINRPSVALGKRQCPGRI*FAPTAG
Trigger: GCCCGCTGTCGGAGCAAAGCAGATTCTTCCAGGACA...TTGCCTCTTGCCAAGAGCTACTGATGGTCTGTTGATGTGGGGTGAGGCTGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CGCTCAGCCTCACCCCACATCAACAGACCATCAGTAGCTCTTGGCAAGAGGCAAAATCTTTTCCCTTGCTaGCCAGTGCAGGCCCGGTTA +
Preference number: 4 (lower is better)
Translates to: RSASPHINRPSVALGKRQNLFPC*PVQARL
Trigger: TAACCGGGCCTGCACTGGGCAGCAAGGGAAAAGATT...TTGCCTCTTGCCAAGAGCTACTGATGGTCTGTTGATGTGGGGTGAGGCTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGCCTCACCCCACATCAACAGACCATCAGTAGCTCTTGGCAAGAGGCAACTTCTCACTCTGTTGTCCCCTaGTCTGGCCTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: SLTPHQQTISSSWQEATSHSVVP*SGLIHP
Trigger: CGGGTGAATCAGGCCAGAGCAGGGGACAACAGAGTG...AGAAGTTGCCTCTTGCCAAGAGCTACTGATGGTCTGTTGATGTGGGGTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGAGATGACATGGATTCCTaGGACCTGGGGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGDDMDS*DLGEDS
Trigger: AGAATCTTCCCCCAGGTCCCAGGAATCCATGTCATC...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGACAGAAGATCTGGATaGCAAGCTTTGACGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLDRRSG*QALTLH
Trigger: GTGCAGCGTCAAAGCTTGTCATCCAGATCTTCTGTC...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TATCAATGCTTTGCCTATGGCTGTTATTTGGTTCAATGGCAGAATAAGGCGACAACGTGTTGCCGTGGTTaGGGAGCCCCGCCACGCCGG +
Preference number: 4 (lower is better)
Translates to: YQCFAYGCYLVQWQNKATTCCRG*GAPPRR
Trigger: CCGGCGTGGCGGGGCTCCGCAACCACGGCAACACGT...TGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGTCGACCTTGTTTTGCTaGAGTTGGTGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLSTLFC*SWCWGR
Trigger: TCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGA...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAAGGCTTGCTTGCTTCCTaGGAGCCGGCTCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKGLLAS*EPAHPV
Trigger: CACTGGGTGAGCCGGCTCCCAGGAAGCAAGCAAGCC...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGATCCCACCAGCCTTTTTaGATAGCAAGGTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGSHQPF*IARLSC
Trigger: GCAAGACAACCTTGCTATCCAAAAAGGCTGGTGGGA...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGTCTTCTGACAGCTGCTaGACATCGCTATCATCGAAG +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLSSDSC*TSLSSK
Trigger: CTTCGATGATAGCGATGTGCAGCAGCTGTCAGAAGA...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGTTGTTTTGCTGCAGTTaGTGCTGGGGAAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLLFCCS*CWGRQS
Trigger: AGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAA...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGACTTGGTTGTGCTCTCTaGCTTCTTTGTGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGLGCAL*LLCERI
Trigger: GATTCTCTCACAAAGAAGCCAGAGAGCACAACCAAG...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGAGCGGGCAGGTTTCATaGAAACCTTTACAGGAACAG +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLSGQVS*KPLQEQ
Trigger: CTGTTCCTGTAAAGGTTTCCATGAAACCTGCCCGCT...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTCGGCGCCCTCGGAGCTaGGGTGCGAGAGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFRRPRS*GARAWT
Trigger: TGTCCACGCTCTCGCACCTCAGCTCCGAGGGCGCCG...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp CGCTCAGCCTCACCCCACATCAACAGACCATCAGTAGCTCTTGGCAAGAGGCAACAATTTTCCAGGGTCTaGGTCATCTTTGAACACACC +
Preference number: 4 (lower is better)
Translates to: RSASPHINRPSVALGKRQQFSRV*VIFEHT
Trigger: GGTGTGTTCAAAGATGACTCAGACCCTGGAAAATTG...TTGCCTCTTGCCAAGAGCTACTGATGGTCTGTTGATGTGGGGTGAGGCTGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TCAGTCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTGGGAAGCCACAATGGAGGCTGGCCACTCTaGTTTACAGCATGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SVTPRQDRESFNALGSHNGGWPL*FTAWLR
Trigger: CCTCAACCATGCTGTAAAGCAGAGTGGCCAGCCTCC...ATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CGCGCTGTTGGTTGGTGCTGTGTGTCTCCTGGGAATGACTGCCCTACCAGGCTAAAGGGTCAAAAGTGTTaGTCTGTTTCTGACAATGAG +
Preference number: 4 (lower is better)
Translates to: RAVGWCCVSPGNDCPTRLKGQKC*SVSDNE
Trigger: CTCATTGTCAGAAACAGAGCAACACTTTTGACCCTT...TAGCCTGGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGATAGCAAGGTTGTCTTaGCAAGATCAGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLIARLS*QDQLTS
Trigger: GGAGGTCAACTGATCTTGGCAAGACAACCTTGCTAT...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp TCTTCCAGGACACAAGTGCTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTGGGGAGGTTTCACCTCTTTaGCTGGAGAGCTGTCAACAG +
Preference number: 4 (lower is better)
Translates to: SSRTQVLKLSACLCMQSGEVSPL*LESCQQ
Trigger: CTGTTGACAGCTCTCCAGTCAAAGAGGTGAAACCTC...CCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TATCAATGCTTTGCCTATGGCTGTTATTTGGTTCAATGGCAGAATAAGGCGACACCTGCTGCAGCTGCTTaGAGTGTGGGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YQCFAYGCYLVQWQNKATPAAAA*SVGTSR
Trigger: CCTGGAGGTGCCCACACTGCAAGCAGCTGCAGCAGG...TGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTAAGCACGTGTTGCCGTaGTTGCGGAGCCCCGCCACG +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASKHVLP*LRSPAT
Trigger: CGTGGCGGGGCTCCGCAACCACGGCAACACGTGCTT...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGCTGCAAAGTATTTCTAAGAGATTTCCACAAGCCTTGGAAAAGTGTCTTCTTTACCAGATGCGCCAGCTaGTCGGTGACCTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SCKVFLRDFHKPWKSVFFTRCAS*SVTSPW
Trigger: CCAGGGCGAGGTCACCGAGCAGCTGGCGCATCTGGT...AAAGAAGACACTTTTCCAAGGCTTGTGGAAATCTCTTAGAAATACTTTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAAGTGATGCTCCCCTGCTaGAGCTGCTTGCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKVMLPC*SCLQCG
Trigger: CCCACACTGCAAGCAGCTGCAGCAGGGGAGCATCAC...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 72 bp GGTATCTTCCAGGACACAAGTGCTCAAGCTTTCTGCTaGCCTCTGTATGCAAAGTGGGCCCAAATGGATGAA +
Preference number: 4 (lower is better)
Translates to: GIFQDTSAQAFC*PLYAKWAQMDE
Trigger: TTCATCCATTTGGGCCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 72 bp GCCCTGCATGGCAGTGATGATTCTCACCGTAAACTGTaGGCAAAAAGATGGTGTACCCACATCCTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: ALHGSDDSHRKL*AKRWCTHILQF
Trigger: GAACTGAAGGATGTGGGTACACCATCTTTTTGCCAACAGTTTACGGTGAGAATCATCACTGCCATGCAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGATCTGTACTGGGCTTaGAAAAGTTCTTGTACAAAA +
Preference number: 4 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLDLYWA*KSSCTK
Trigger: TTTTGTACAAGAACTTTTTCAAGCCCAGTACAGATC...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGCCTCACCCCACATCAACAGACCATCAGTAGCTCTTGGCAAGAGGCAACTTCTTCTGTTAACACAATCTaGTCAGTGGGGATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SLTPHQQTISSSWQEATSSVNTI*SVGIFV
Trigger: GACAAAGATCCCCACTGATCAGATTGTGTTAACAGA...AGAAGTTGCCTCTTGCCAAGAGCTACTGATGGTCTGTTGATGTGGGGTGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTTGTGTTTGGCTGCTGTaGGCCGGGAGGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFCVWLL*AGRLMA
Trigger: GGCCATCAGCCTCCCGGCTCACAGCAGCCAAACACA...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TCAGTCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTGGGAAGCCACAATTCATCTTCTGACAGCTaGTGCACATCGCTATCATCG +
Preference number: 4 (lower is better)
Translates to: SVTPRQDRESFNALGSHNSSSDS*CTSLSS
Trigger: CGATGATAGCGATGTGCAGCAGCTGTCAGAAGATGA...ATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTGAGAGGCCAAGGACGTaGGTCTGGAGGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFERPRT*VWRRLQ
Trigger: CTGCAGCCTCCTCCAGACGCACGTCCTTGGCCTCTC...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TCAGTCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTGGGAAGCCACAATGGGAAGACTTGGATCTaGGAGCAGATAGCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SVTPRQDRESFNALGSHNGKTWI*EQIARN
Trigger: ATTCCTTGCTATCTGCTCGCAGATCCAAGTCTTCCC...ATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTTTCCATGACAGCCAGTaGGGCCCGGCCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFFHDSQ*GPAHSL
Trigger: AAGGCTGTGGGCCGGGCCCCACTGGCTGTCATGGAA...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTAGAGCTCGGTGTTACTaGGGCACTGCAGCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTRARCY*GTAAWR
Trigger: ACGCCACGCTGCAGTGCCTCAGTAACACCGAGCTCT...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAATCTCTGGCTTCTTTGTaGGAGAATCTGAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKSLASL*ENLSGL
Trigger: CAAGCCACTCAGATTCTCTCACAAAGAAGCCAGAGA...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAAAGCCGGCTCACCCAGTaGTCACACAGAGACGAACTT +
Preference number: 4 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKSRLTQ*SHRDEL
Trigger: AAGTTCGTCTCTGTGTGAGCACTGGGTGAGCCGGCT...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTTCACACTGGCTTGCTTaGTTCCTGGGAGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASSHWLA*FLGAGS
Trigger: TGAGCCGGCTCCCAGGAAGCAAGCAAGCCAGTGTGA...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TCAGTCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTGGGAAGCCACAATTTTTTGAGAAGGCCGTaGAGAGGTTTGCATGCTAGA +
Preference number: 4 (lower is better)
Translates to: SVTPRQDRESFNALGSHNFLRRP*RGLHAR
Trigger: TCTAGCATGCAAACCTCTGCACGGCCTTCTCAAAAA...ATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGACTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp GATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCACACAGAGCAGGAACTCCTaGGCATCATGCTGGGAATTT +
Preference number: 4 (lower is better)
Translates to: DKLFVGSLMLNGMRTHSTQSRNS*ASCWEF
Trigger: AAATTCCCAGCATGATGCCCAGGAGTTCCTGCTCTG...TGTGCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAAGGCTTCAGAGGAGGCTaGCCACTCTGCTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKGFRGG*PLCFTA
Trigger: TGCTGTAAAGCAGAGTGGCCAGCCTCCTCTGAAGCC...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp TCAGTCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTGGGAAGCCACAATACACAATCTGATCAGTaGGGATCTTTGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: SVTPRQDRESFNALGSHNTQSDQ*GSLSPW
Trigger: CCATGGAGACAAAGATCCCCACTGATCAGATTGTGT...ATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAAATAGGGCCGTCGCCATaGGGACCAATGAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKIGPSP*GPMRWQ
Trigger: TTGCCATCTCATTGGTCCCCATGGCGACGGCCCTAT...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTAGCGGGAAGGAGAACTaGAGCGCATCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASSGKEN*SASAAW
Trigger: CCAAGCTGCAGATGCGCTCCAGTTCTCCTTCCCGCT...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCAACGCAGGCTGGCCATaGAGGAGCTCCGGACGTGCT +
Preference number: 4 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCNAGWP*RSSGRA
Trigger: AGCACGTCCGGAGCTCCTCCATGGCCAGCCTGCGTT...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 72 bp TTAACAGCAAAACAACATTACCAATTCATCGCGCTGTaGGTTGGTGCTGTGTGTCTCCTGGGAATGACTGCC +
Preference number: 4 (lower is better)
Translates to: LTAKQHYQFIAL*VGAVCLLGMTA
Trigger: GGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCGATGAATTGGTAATGTTGTTTTGCTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp TCAGTCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTGGGAAGCCACAATCTTGATACACTACAGTaGCATAGAGAGGCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: SVTPRQDRESFNALGSHNLDTLQ*HREALY
Trigger: ATACAAGGCCTCTCTATGTCACTGTAGTGTATCAAG...ATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGCTGCAAAGTATTTCTAAGAGATTTCCACAAGCCTTGGAAAAGTGTCTTCTTTTGTGAGCCGGGAGGCTaGTGGCCTTTCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SCKVFLRDFHKPWKSVFFCEPGG*WPFSVL
Trigger: CAAGACAGAGAAAGGCCATCAGCCTCCCGGCTCACA...AAAGAAGACACTTTTCCAAGGCTTGTGGAAATCTCTTAGAAATACTTTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TATCAATGCTTTGCCTATGGCTGTTATTTGGTTCAATGGCAGAATAAGGCGACAGTGTTACTGAGGCACTaGAGCGTGGCGTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: YQCFAYGCYLVQWQNKATVLLRH*SVAFMK
Trigger: CTTCATGAACGCCACGCTGCAGTGCCTCAGTAACAC...TGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGCTGCAAAGTATTTCTAAGAGATTTCCACAAGCCTTGGAAAAGTGTCTTCTTTCCAAATCTTTTCCCTTaGTGCCCAGTGCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SCKVFLRDFHKPWKSVFFPNLFP*CPVQAR
Trigger: CCGGGCCTGCACTGGGCAGCAAGGGAAAAGATTTGG...AAAGAAGACACTTTTCCAAGGCTTGTGGAAATCTCTTAGAAATACTTTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp GATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCACACAGACGGACACTCTCTaGATCAGGGATATACTCATC +
Preference number: 4 (lower is better)
Translates to: DKLFVGSLMLNGMRTHSTQTDTL*IRDILI
Trigger: GATGAGTATATCCCTGATGCAGAGAGTGTCCGTCTG...TGTGCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp GTGAGAGGCACAGTTGGTGAGCAAAGCTACACAACACAAATGCCTACAGGAAAATGGTGCCATGATGATTaGACACAGCATACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VRGTVGEQSYTTQMPTGKWCHDD*TQHTGH
Trigger: ATGACCTGTATGCTGTGTGCAATCATCATGGCACCA...TTTTCCTGTAGGCATTTGTGTTGTGTAGCTTTGCTCACCAACTGTGCCTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCTGTAAGCTGTCTGCGTaGACACCTCATCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSCKLSA*TPHLLT
Trigger: TGTCAGAAGATGAGGTGTGCACGCAGACAGCTTACA...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGCTGCAAAGTATTTCTAAGAGATTTCCACAAGCCTTGGAAAAGTGTCTTCTTTGAAGTCACACTGGCTTaGTTGCTTCCTGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SCKVFLRDFHKPWKSVFFEVTLA*LLPGSR
Trigger: CCGGCTCCCAGGAAGCAAGCAAGCCAGTGTGACTTC...AAAGAAGACACTTTTCCAAGGCTTGTGGAAATCTCTTAGAAATACTTTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CTTCTGATGCCACTCAACAATCCACATGAAGATAAATTCTGCTCAGATGAAACCTGCTGCAGTTGGTGCTaGGGAAGACAGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: LLMPLNNPHEDKFCSDETCCSWC*GRQSVM
Trigger: CATCACAGACTGTCTTCCCCAGCACCAACTGCAGCA...GGTTTCATCTGAGCAGAATTTATCTTCATGTGGATTGTTGAGTGGCATCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp GATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCACACAAGCCGTTCCTCCTTaGTGTAGAGTTGGAAACACT +
Preference number: 4 (lower is better)
Translates to: DKLFVGSLMLNGMRTHSTQAVPP*CRVGNT
Trigger: AGTGTTTCCAACTCTACACCAAGGAGGAACGGCTTG...TGTGCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTTGGGGACCAATGAGATaGCAAGCTCCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASWGPMR*QAPAAL
Trigger: CAGAGCAGCTGGAGCTTGCCATCTCATTGGTCCCCA...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCGTGAGAGAATCTGAGTaGCTTGGAGGTTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSVRESE*LGGFTS
Trigger: AGAGGTGAAACCTCCAAGCCACTCAGATTCTCTCAC...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 72 bp ATTTACCAGCTTGTTTCCGTTGACAACGATCACTCCTaGACACTGACTTGGTATCTTCCAGGACACAAGTGC +
Preference number: 4 (lower is better)
Translates to: IYQLVSVDNDHS*TLTWYLPGHKC
Trigger: GCACTTGTGTCCTGGAAGATACCAAGTCAGTGTCAAGGAGTGATCGTTGTCAACGGAAACAAGCTGGTAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAATTGACACAATACTCTTaGAGTCGCGGCTGTGTTGCG +
Preference number: 4 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKLTQYS*SRGCVA
Trigger: CGCAACACAGCCGCGACTTCAAGAGTATTGTGTCAA...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTTCACTTGGTTCCTGGTaGCTACCAGAAAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASSLGSW*LPERFR
Trigger: GCGGAACCTTTCTGGTAGTCACCAGGAACCAAGTGA...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp TATCAATGCTTTGCCTATGGCTGTTATTTGGTTCAATGGCAGAATAAGGCGACAGGTAGAGGAGGAAGATaGATGCCTTCCACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: YQCFAYGCYLVQWQNKATGRGGR*MPSTCP
Trigger: AGGACAAGTGGAAGGCATTCATCTTCCTCCTCTACC...TGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp TATCAATGCTTTGCCTATGGCTGTTATTTGGTTCAATGGCAGAATAAGGCGACAAGTGTTCTTACTGACTaGCTTGACAGAGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: YQCFAYGCYLVQWQNKATSVLTD*LDRAPT
Trigger: GGTGGGAGCTCTGTCAAGTCAGTCAGTAAGAACACT...TGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CTTCTGATGCCACTCAACAATCCACATGAAGATAAATTCTGCTCAGATGAAACCACTGTCTTCTCTAGGTaGAGGACAAAGGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LLMPLNNPHEDKFCSDETTVFSR*RTKGSP
Trigger: TGGACTGCCCTTTGTCCTGCACCTAGAGAAGACAGT...GGTTTCATCTGAGCAGAATTTATCTTCATGTGGATTGTTGAGTGGCATCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGCTGCAAAGTATTTCTAAGAGATTTCCACAAGCCTTGGAAAAGTGTCTTCTTTGTTTCACATGAGCTGTaGCGCCTGGTCCACAGGACT +
Preference number: 4 (lower is better)
Translates to: SCKVFLRDFHKPWKSVFFVSHEL*RLVHRT
Trigger: AGTCCTGTGGACCAGGCGGCACAGCTCATGTGAAAC...AAAGAAGACACTTTTCCAAGGCTTGTGGAAATCTCTTAGAAATACTTTGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCGAACTGGAGCGCATCTaGAGCTTGGCAGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCELERI*SLADRD
Trigger: GTCCCTGTCTGCCAAGCTGCAGATGCGCTCCAGTTC...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCAGGCTGGCCTCCCCTTaGGCATGTTCTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCRLASP*ACSSLA
Trigger: AGCCAGAGAAGAACATGCGCAAGGGGAGGCCAGCCT...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTTCCGGTCAGAAGTCCTaGTCTTCCCAGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTSGQKS*SSQKGR
Trigger: CCTTCCCTTCTGGGAAGAGCAGGACTTCTGACCGGA...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CTTCTGATGCCACTCAACAATCCACATGAAGATAAATTCTGCTCAGATGAAACCTCCTGGGCATCATGCTaGGAATTTCCTCGATACTGC +
Preference number: 4 (lower is better)
Translates to: LLMPLNNPHEDKFCSDETSWASC*EFPRYC
Trigger: GCAGTATCGAGGAAATTCCCAGCATGATGCCCAGGA...GGTTTCATCTGAGCAGAATTTATCTTCATGTGGATTGTTGAGTGGCATCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CTTCTGATGCCACTCAACAATCCACATGAAGATAAATTCTGCTCAGATGAAACCCTTTCTACTGTTGGGTaGCACAAGGGCTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLMPLNNPHEDKFCSDETLSTVG*HKGCSS
Trigger: GGAAGAACAGCCCTTGTGCCACCCAACAGTAGAAAG...GGTTTCATCTGAGCAGAATTTATCTTCATGTGGATTGTTGAGTGGCATCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTTGCCCTTTCTACTGTTaGGTGGCACAAGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASCPFYC*VAQGLF
Trigger: GAACAGCCCTTGTGCCACCCAACAGTAGAAAGGGCA...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp TTTTCTACAATTATTCCAGTTAGCTTGGTATCAATGCTTTGCCTATGGCTGTTACAGCTGCTTGCAGTGTaGGCACCTCCAGGCATCATC +
Preference number: 4 (lower is better)
Translates to: FSTIIPVSLVSMLCLWLLQLLAV*APPGII
Trigger: GATGATGCCTGGAGGTGCCCACACTGCAAGCAGCTG...TAACAGCCATAGGCAAAGCATTGATACCAAGCTAACTGGAATAATTGTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp AGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTGCATGTGAAGGAGATGACATaGATTCCTGGGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RRNVSRSFSVCFLISCLHVKEMT*IPGTWG
Trigger: CCCCCAGGTCCCAGGAATCCATGTCATCTCCTTCAC...ATGCAAGCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTGGTCATCTGTGTCACTaGAGGAACGATGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASGHLCH*RNDGTH
Trigger: ATGGGTTCCATCGTTCCTTCAGTGACACAGATGACC...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp TTTTCTACAATTATTCCAGTTAGCTTGGTATCAATGCTTTGCCTATGGCTGTTACTGGATGACAAGCTTTaGCGCTGCACGCTTCTCACG +
Preference number: 4 (lower is better)
Translates to: FSTIIPVSLVSMLCLWLLLDDKL*RCTLLT
Trigger: CGTGAGAAGCGTGCAGCGTCAAAGCTTGTCATCCAG...TAACAGCCATAGGCAAAGCATTGATACCAAGCTAACTGGAATAATTGTAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAAAACTCCTGGGCATCATaGTGGGAATTTCCTCGATAC +
Preference number: 4 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKNSWAS*WEFPRY
Trigger: GTATCGAGGAAATTCCCAGCATGATGCCCAGGAGTT...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CTTCTGATGCCACTCAACAATCCACATGAAGATAAATTCTGCTCAGATGAAACCTCCAAGATCTCCTTCTaGAGAAGGTCCCATGCTACT +
Preference number: 4 (lower is better)
Translates to: LLMPLNNPHEDKFCSDETSKISF*RRSHAT
Trigger: AGTAGCATGGGACCTTCTGCAGAAGGAGATCTTGGA...GGTTTCATCTGAGCAGAATTTATCTTCATGTGGATTGTTGAGTGGCATCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTAATGTGATGCTCCCCTaGTGCAGCTGCTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFNVMLP*CSCLQC
Trigger: ACACTGCAAGCAGCTGCAGCAGGGGAGCATCACATT...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTCCTTATCCTCAGACTTaGTGTCCCTCTTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASPYPQT*CPSSTQ
Trigger: CTGGGTTGAAGAGGGACAGCAAGTCTGAGGATAAGG...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCAGCGCATCTGCAGCTTaGCAGACAGGGACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCSASAA*QTGTKK
Trigger: CTTCTTGGTCCCTGTCTGCCAAGCTGCAGATGCGCT...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAAAGCCTAAGCTTTGTCTaGAGCCTTCTCTACTCAAGC +
Preference number: 4 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKSLSFV*SLLYSS
Trigger: GCTTGAGTAGAGAAGGCTCCAGACAAAGCTTAGGCT...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTCTAGCTGGGAAGACTTaGATCTGCGAGCAGATAGCA +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASLAGKT*ICEQIA
Trigger: TGCTATCTGCTCGCAGATCCAAGTCTTCCCAGCTAG...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 72 bp AGCATGCTTTCTGAGCTGGACGGTGGGCATGCACAATaGTTTTCCTTACAAAATGATTGGTCATGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SMLSELDGGHAQ*FSLQNDWSCSK
Trigger: TTTTGAGCATGACCAATCATTTTGTAAGGAAAACAATTGTGCATGCCCACCGTCCAGCTCAGAAAGCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTGCATTGCTCTCGTCTATTGTaGCTGTCACTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RRNVSRSFSVCFLISCLHCSRLL*LSLGSW
Trigger: CCAGGAACCAAGTGACAGTCACAATAGACGAGAGCA...ATGCAAGCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp TATCAATGCTTTGCCTATGGCTGTTATTTGGTTCAATGGCAGAATAAGGCGACATTTCTGTCTCAAGGCTaGCTTAAAGAAGGACAGTCC +
Preference number: 4 (lower is better)
Translates to: YQCFAYGCYLVQWQNKATFLSQG*LKEGQS
Trigger: GGACTGTCCTTCTTTAAGTCAGCCTTGAGACAGAAA...TGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCGTTCTTGTACAAAAGTaGTACACACAGGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSVLVQK*YTQEKV
Trigger: GACCTTTTCCTGTGTGTAGCACTTTTGTACAAGAAC...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTGAGGAGGAAGATGAATaGCTTCCACTTGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASEEEDE*LPLVLE
Trigger: TTCCAGGACAAGTGGAAGGCATTCATCTTCCTCCTC...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTGCTCCAGAATCTAGCTaGGAAGACTTGGATCTGCGA +
Preference number: 4 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTAPESS*EDLDLR
Trigger: TCGCAGATCCAAGTCTTCCCAGCTAGATTCTGGAGC...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp TATCAATGCTTTGCCTATGGCTGTTATTTGGTTCAATGGCAGAATAAGGCGACACTGCAACGCATTCTTTaGCACAATACTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: YQCFAYGCYLVQWQNKATLQRIL*HNTLEV
Trigger: GACTTCAAGAGTATTGTGTCAAAGAATGCGTTGCAG...TGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAACAGTCAAGGGGAACTTaGCCATATTCTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKQSRGT*PYSEVS
Trigger: TGAAACTTCAGAATATGGTCAAGTTCCCCTTGACTG...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TTTTCTACAATTATTCCAGTTAGCTTGGTATCAATGCTTTGCCTATGGCTGTTACCACACCGATCCTCATaGAGTGGGAACATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: FSTIIPVSLVSMLCLWLLPHRSS*SGNISL
Trigger: AAGGGAAATGTTCCCACTGCATGAGGATCGGTGTGG...TAACAGCCATAGGCAAAGCATTGATACCAAGCTAACTGGAATAATTGTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTTTGCTGCAGTTGGTaGTGGGGAAGACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCFCCSW*WGRQSV
Trigger: CACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAA...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTCAAGTGATCCCCTTGTaGTCGGTTTTTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTQVIPL*SVFAWC
Trigger: ACACCAAGCAAAAACCGAGCACAAGGGGATCACTTG...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp CTTCTGATGCCACTCAACAATCCACATGAAGATAAATTCTGCTCAGATGAAACCTTGTTCCTTTCCAACTaGATTTGTGTTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLMPLNNPHEDKFCSDETLFLSN*ICVWLL
Trigger: CAGCAGCCAAACACAAATGCAGTTGGAAAGGAACAA...GGTTTCATCTGAGCAGAATTTATCTTCATGTGGATTGTTGAGTGGCATCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTGGATCTTTGTCTCCATaGATACAGCTTCCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFGSLSP*IQLPEV
Trigger: GACTTCGGGAAGCTGTATCCATGGAGACAAAGATCC...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp AGCTGCAAAGTATTTCTAAGAGATTTCCACAAGCCTTGGAAAAGTGTCTTCTTTACAGAGACGAACTTGTaGAACCTGCCACTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: SCKVFLRDFHKPWKSVFFTETNL*NLPLSY
Trigger: ATAGCTCAGTGGCAGGTTCCACAAGTTCGTCTCTGT...AAAGAAGACACTTTTCCAAGGCTTGTGGAAATCTCTTAGAAATACTTTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCGCGCATGTTCTTCTCTaGCTCAGAAGTGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCAHVLL*LRSAFG
Trigger: TCCAAAGGCACTTCTGAGCCAGAGAAGAACATGCGC...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp GATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCACATCTCAAAGGCAAAAATaGAATCACTTTCATGAACTG +
Preference number: 4 (lower is better)
Translates to: DKLFVGSLMLNGMRTHSTSQRQK*NHFHEL
Trigger: CAGTTCATGAAAGTGATTGCATTTTTGCCTTTGAGA...TGTGCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR GCA 90 bp AGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTGCATGCAGAAGCAGACTTTTaGTTCTGTGGTGAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RRNVSRSFSVCFLISCLHAEADF*FCGEGD
Trigger: ATCTCCTTCACCACAGAAGCAAAAGTCTGCTTCTGC...ATGCAAGCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp CACTATCTTTGTATTCAACGACAACCTACAGAGGAAACTGTAACTTCAGCTAGTTTTCACCTCTTTGACTaGAGAGCTGTCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: HYLCIQRQPTEETVTSASFHLFD*RAVNRI
Trigger: GATTCTGTTGACAGCTCTCCAGTCAAAGAGGTGAAA...ACTAGCTGAAGTTACAGTTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTATGCAATCACTTTCATaGACTGTCTCCAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTMQSLS*TVSRSS
Trigger: AGATGACCTGGAGACAGTTCATGAAAGTGATTGCAT...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CCA 90 bp AGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTGCATTACCGAAGCAAGAAATaGAGACTTTGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: RRNVSRSFSVCFLISCLHYRSKK*RLCHHL
Trigger: CAGGTGATGACAAAGTCTCCATTTCTTGCTTCGGTA...ATGCAAGCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 72 bp TTAGCTTGGTATCAATGCTTTGCCTATGGCTGTTATTaGGTTCAATGGCAGAATAAGGCGACACTTTTAACA +
Preference number: 4 (lower is better)
Translates to: LAWYQCFAYGCY*VQWQNKATLLT
Trigger: TGTTAAAAGTGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATACCAAGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR TCA 90 bp AGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTGCATAACTTGACCATATTCTaGAGTTTCATACGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RRNVSRSFSVCFLISCLHNLTIF*SFIRLS
Trigger: AGACAGGCGTATGAAACTTCAGAATATGGTCAAGTT...ATGCAAGCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
3UTR CAA 72 bp ACCAGTGTATGTTCAACATGTCCAATCCACTCCTGCTaGCAAAATACTATTTTATACACAATCTTACCAATG +
Preference number: 4 (lower is better)
Translates to: TSVCSTCPIHSC*QNTILYTILPM
Trigger: CATTGGTAAGATTGTGTATAAAATAGTATTTTGCAAGCAGGAGTGGATTGGACATGTTGAACATACACTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp CTGGCCGTGCGGCCCGCGGCCCGCCGGCTGCTCCGACTCCGGCTCTaGCTCCGGTCGGCCCGCCCGGTACTGGCCCAGAGCCAGGTACTC +
Preference number: 5 (lower is better)
Translates to: LAVRPAARRLLRLRL*LRSARPVLAQSQVL
Trigger: GAGTACCTGGCTCTGGGCCAGTACCGGGCGGGCCGACCGGAGCCAGAGCCGGAGTCGGAGCAGCCGGCGGGCCGCGGGCCGCACGGCCAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp CTGCGGAGGCCGCCGCGGTCCGGGGCGGCGCCCTCGGAGCTGAGGTaGGAGAGCGTGGACAGCGTCTTGAGGACGCGGCTCATGAAACTG +
Preference number: 5 (lower is better)
Translates to: LRRPPRSGAAPSELR*ESVDSVLRTRLMKL
Trigger: CAGTTTCATGAGCCGCGTCCTCAAGACGCTGTCCACGCTCTCGCACCTCAGCTCCGAGGGCGCCGCCCCGGACCGCGGCGGCCTCCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp GGCTGCTCCGACTCCGGCTCTGGCTCCGGTCGGCCCGCCCGGTACTaGCCCAGAGCCAGGTACTCGGCGAAGAGCTCGGTGTTACTGAGG +
Preference number: 5 (lower is better)
Translates to: GCSDSGSGSGRPARY*PRARYSAKSSVLLR
Trigger: CCTCAGTAACACCGAGCTCTTCGCCGAGTACCTGGCTCTGGGCCAGTACCGGGCGGGCCGACCGGAGCCAGAGCCGGAGTCGGAGCAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp CATGGAGGAGCTCCGGACGTGCTTGCCATCCACTCTGTTGTCCCCTaGTCTGGCCTGATTCACCCGAGGGGAGCTGGGTTTGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: HGGAPDVLAIHSVVP*SGLIHPRGAGFGGG
Trigger: TCCACCTCCAAACCCAGCTCCCCTCGGGTGAATCAGGCCAGAGCAGGGGACAACAGAGTGGATGGCAAGCACGTCCGGAGCTCCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 90 bp AGACTTGCTGTCCCTCTTCAACCCAGAGCGCACACTTGTGCTAGGTaGACGCAGGCTGGCCATGGAGGAGCTCCGGACGTGCTTGCCATC +
Preference number: 5 (lower is better)
Translates to: RLAVPLQPRAHTCAR*TQAGHGGAPDVLAI
Trigger: GATGGCAAGCACGTCCGGAGCTCCTCCATGGCCAGCCTGCGTTCACCTAGCACAAGTGTGCGCTCTGGGTTGAAGAGGGACAGCAAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp TACAGACTCAGACAGAGAGGCCAAGGACGTGCGTCTGGAGGAGGCTaGAGAAGTCACACTGGCTTGCTTGCTTCCTGGGAGCCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: YRLRQRGQGRASGGG*RSHTGLLASWEPAH
Trigger: GTGAGCCGGCTCCCAGGAAGCAAGCAAGCCAGTGTGACTTCTGCAGCCTCCTCCAGACGCACGTCCTTGGCCTCTCTGTCTGAGTCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp GATGTAGTCCTCAGGGTCCCTCCCGAGTCCATAGGGCCGTCGCCATaGGGACCAATGAGATGGCAAGCTCCAGCTGCTCTGGCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: DVVLRVPPESIGPSP*GPMRWQAPAALASL
Trigger: AAGAGAAGCCAGAGCAGCTGGAGCTTGCCATCTCATTGGTCCCCATGGCGACGGCCCTATGGACTCGGGAGGGACCCTGAGGACTACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp TCATCACCTGCCTCGCCAATCCTTTCAAGGGTGGAGGCAGATCCATaGATTGGGGAGTCCCCTGAGAAGCGGGAAGGAGAACTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SSPASPILSRVEADP*IGESPEKREGELER
Trigger: GCGCTCCAGTTCTCCTTCCCGCTTCTCAGGGGACTCCCCAATCCATGGATCTGCCTCCACCCTTGAAAGGATTGGCGAGGCAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp AGCACATCAGGCAGAGTCCACAGGCTTAATGTGATGCTCCCCTGCTaGAGCTGCTTGCAGTGTGGGCACCTCCAGGCATCATCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: STSGRVHRLNVMLPC*SCLQCGHLQASSGA
Trigger: TGCTCCAGATGATGCCTGGAGGTGCCCACACTGCAAGCAGCTGCAGCAGGGGAGCATCACATTAAGCCTGTGGACTCTGCCTGATGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGTTCATGAAGCACGTGTaGCCGTGGTTGCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLFMKHV*PWLRSP
Trigger: GGGGCTCCGCAACCACGGCAACACGTGCTTCATGAA...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp CGCGCTGTTGGTTGGTGCTGTGTGTCTCCTGGGAATGACTGCCCTACCAGGCTAGAACTAGGGGAGCTCTaGGTTGTGCTCTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: RAVGWCCVSPGNDCPTRLELGEL*VVLSGF
Trigger: GAAGCCAGAGAGCACAACCAAGAGCTCCCCTAGTTC...TAGCCTGGTAGGGCAGTCATTCCCAGGAGACACACAGCACCAACCAACAGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 90 bp AATCCTTTCAAGGGTGGAGGCAGATCCATGGATTGGGGAGTCCCCTaGGAAGCGGGAAGGAGAACTGGAGCGCATCTGCAGCTTGGCAGA +
Preference number: 5 (lower is better)
Translates to: NPFKGGGRSMDWGVP*EAGRRTGAHLQLGR
Trigger: TCTGCCAAGCTGCAGATGCGCTCCAGTTCTCCTTCCCGCTTCTCAGGGGACTCCCCAATCCATGGATCTGCCTCCACCCTTGAAAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp GAAGTCACACTGGCTTGCTTGCTTCCTGGGAGCCGGCTCACCCAGTaGTCACACAGAGACGAACTTGTGGAACCTGCCACTGAGCTATTG +
Preference number: 5 (lower is better)
Translates to: EVTLACLLPGSRLTQ*SHRDELVEPATELL
Trigger: CAATAGCTCAGTGGCAGGTTCCACAAGTTCGTCTCTGTGTGAGCACTGGGTGAGCCGGCTCCCAGGAAGCAAGCAAGCCAGTGTGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp TCTCCCCTGTCATCTCTACAGACTCAGACAGAGAGGCCAAGGACGTaGGTCTGGAGGAGGCTGCAGAAGTCACACTGGCTTGCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: SPLSSLQTQTERPRT*VWRRLQKSHWLACF
Trigger: GAAGCAAGCAAGCCAGTGTGACTTCTGCAGCCTCCTCCAGACGCACGTCCTTGGCCTCTCTGTCTGAGTCTGTAGAGATGACAGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp TTCCTGGCTAGCCAAGGCTGGCCTCCCCTTGCGCATGTTCTTCTCTaGCTCAGAAGTGCCTTTGGAACTAGGGGAGCTCTTGGTTGTGCT +
Preference number: 5 (lower is better)
Translates to: FLASQGWPPLAHVLL*LRSAFGTRGALGCA
Trigger: AGCACAACCAAGAGCTCCCCTAGTTCCAAAGGCACTTCTGAGCCAGAGAAGAACATGCGCAAGGGGAGGCCAGCCTTGGCTAGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp ATAAGCACATCAGGCAGAGTCCACAGGCTTAATGTGATGCTCCCCTaGTGCAGCTGCTTGCAGTGTGGGCACCTCCAGGCATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: ISTSGRVHRLNVMLP*CSCLQCGHLQASSG
Trigger: TCCAGATGATGCCTGGAGGTGCCCACACTGCAAGCAGCTGCAGCAGGGGAGCATCACATTAAGCCTGTGGACTCTGCCTGATGTGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp GATCAGTGGGGATCTTTGTCTCCATGGATACAGCTTCCCGAAGTCTaGCAACAGTCCCAGACAGAGGCACAGCCACACCGATCCTCATGC +
Preference number: 5 (lower is better)
Translates to: DQWGSLSPWIQLPEV*QQSQTEAQPHRSSC
Trigger: GCATGAGGATCGGTGTGGCTGTGCCTCTGTCTGGGACTGTTGCCAGACTTCGGGAAGCTGTATCCATGGAGACAAAGATCCCCACTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp CTTGTCGCTTGCCACTCTGGTGGGCAAGTCTACTCGACCTTGTTTTaGTGCAGTTGGTGCTGGGGAAGACAGTCTGTGATGATCCAAGCC +
Preference number: 5 (lower is better)
Translates to: LVACHSGGQVYSTLF*CSWCWGRQSVMIQA
Trigger: GGCTTGGATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp AAATGGAGACTTTGTCATCACCTGCCTCGCCAATCCTTTCAAGGGTaGAGGCAGATCCATGGATTGGGGAGTCCCCTGAGAAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: KWRLCHHLPRQSFQG*RQIHGLGSPLRSGK
Trigger: CTTCCCGCTTCTCAGGGGACTCCCCAATCCATGGATCTGCCTCCACCCTTGAAAGGATTGGCGAGGCAGGTGATGACAAAGTCTCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TCAGTCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTGGGAAGCCACAATGAAGTCGCGGCTGTGTaGCGGGGTGTACTCCAGCGT +
Preference number: 5 (lower is better)
Translates to: SVTPRQDRESFNALGSHNEVAAV*RGVLQR
Trigger: ACGCTGGAGTACACCCCGCAACACAGCCGCGACTTC...ATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp CTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGGGAAAGAAGGAGATGGGCTaGACAGAGAAGATTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LNGIKSLGAAQAFQVPWGKKEMG*TEKIPG
Trigger: GCCAGGAATCTTCTCTGTCAAGCCCATCTCCTTCTT...TCCCCAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 90 bp TTGACAGCCAAGGGGCTGGTGACAGAAGATCTGGATGACAAGCTTTaGCGCTGCACGCTTCTCACGAACGGTCGAGTAGAAAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LTAKGLVTEDLDDKL*RCTLLTNGRVEKPP
Trigger: TGGAGGCTTTTCTACTCGACCGTTCGTGAGAAGCGTGCAGCGTCAAAGCTTGTCATCCAGATCTTCTGTCACCAGCCCCTTGGCTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp GTCGCTTGCCACTCTGGTGGGCAAGTCTACTCGACCTTGTTTTGCTaGAGTTGGTGCTGGGGAAGACAGTCTGTGATGATCCAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: VACHSGGQVYSTLFC*SWCWGRQSVMIQAK
Trigger: TTTGGCTTGGATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp CCCAGTGCAGGCCCGGTTACATACAAGCAGAACAATCTTGTCGCTTaGCACTCTGGTGGGCAAGTCTACTCGACCTTGTTTTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PSAGPVTYKQNNLVA*HSGGQVYSTLFCCS
Trigger: ACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGATTGTTCTGCTTGTATGTAACCGGGCCTGCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TCTTCCAGGACACAAGTGCTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTGGGAGAAGTCACACTGGCTaGCTTGCTTCCTGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: SSRTQVLKLSACLCMQSGRSHTG*LASWEP
Trigger: CGGCTCCCAGGAAGCAAGCAAGCCAGTGTGACTTCT...CCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TCAGTCACACCAAGGCAGGACAGAGAGAGCTTTAATGCTTTGGGAAGCCACAATAAGGCTGGCCTCCCCTaGCGCATGTTCTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SVTPRQDRESFNALGSHNKAGLP*RMFFSG
Trigger: GCCAGAGAAGAACATGCGCAAGGGGAGGCCAGCCTT...ATTGTGGCTTCCCAAAGCATTAAAGCTCTCTCTGTCCTGCCTTGGTGTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp GTTCCGCAGACTACCGAAGCAAGAAATGGAGACTTTGTCATCACCTaGCTCGCCAATCCTTTCAAGGGTGGAGGCAGATCCATGGATTGG +
Preference number: 5 (lower is better)
Translates to: VPQTTEARNGDFVIT*LANPFKGGGRSMDW
Trigger: CCAATCCATGGATCTGCCTCCACCCTTGAAAGGATTGGCGAGGCAGGTGATGACAAAGTCTCCATTTCTTGCTTCGGTAGTCTGCGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp AGGCCCGGTTACATACAAGCAGAACAATCTTGTCGCTTGCCACTCTaGTGGGCAAGTCTACTCGACCTTGTTTTGCTGCAGTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RPGYIQAEQSCRLPL*WASLLDLVLLQLVL
Trigger: CAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGATTGTTCTGCTTGTATGTAACCGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp GTGGTCGACCTGCTACTGGGAGACAAGGGAGCTCCAGAATCTAGCTaGGAAGACTTGGATCTGCGAGCAGATAGCAAGGAATGTTTAGCA +
Preference number: 5 (lower is better)
Translates to: VVDLLLGDKGAPESS*EDLDLRADSKECLA
Trigger: TGCTAAACATTCCTTGCTATCTGCTCGCAGATCCAAGTCTTCCCAGCTAGATTCTGGAGCTCCCTTGTCTCCCAGTAGCAGGTCGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGCTGCAAAGTATTTCTAAGAGATTTCCACAAGCCTTGGAAAAGTGTCTTCTTTCACGTGTTGCCGTGGTaGCGGAGCCCCGCCACGCCG +
Preference number: 5 (lower is better)
Translates to: SCKVFLRDFHKPWKSVFFHVLPW*RSPATP
Trigger: CGGCGTGGCGGGGCTCCGCAACCACGGCAACACGTG...AAAGAAGACACTTTTCCAAGGCTTGTGGAAATCTCTTAGAAATACTTTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 90 bp GCAATTTTCATTGACAGCCAAGGGGCTGGTGACAGAAGATCTGGATaGCAAGCTTTGACGCTGCACGCTTCTCACGAACGGTCGAGTAGA +
Preference number: 5 (lower is better)
Translates to: AIFIDSQGAGDRRSG*QALTLHASHERSSR
Trigger: TCTACTCGACCGTTCGTGAGAAGCGTGCAGCGTCAAAGCTTGTCATCCAGATCTTCTGTCACCAGCCCCTTGGCTGTCAATGAAAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 90 bp AGGGGAGCTCTTGGTTGTGCTCTCTGGCTTCTTTGTGAGAGAATCTaGGTGGCTTGGAGGTTTCACCTCTTTGACTGGAGAGCTGTCAAC +
Preference number: 5 (lower is better)
Translates to: RGALGCALWLLCERI*VAWRFHLFDWRAVN
Trigger: GTTGACAGCTCTCCAGTCAAAGAGGTGAAACCTCCAAGCCACTCAGATTCTCTCACAAAGAAGCCAGAGAGCACAACCAAGAGCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp AAGATCTCCTTCTGCAGAAGGTCCCATGCTACTGTCTTCTCTAGGTaGAGGACAAAGGGCAGTCCAAATCTTTTCCCTTGCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: KISFCRRSHATVFSR*RTKGSPNLFPCCPV
Trigger: CACTGGGCAGCAAGGGAAAAGATTTGGACTGCCCTTTGTCCTGCACCTAGAGAAGACAGTAGCATGGGACCTTCTGCAGAAGGAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp CAAGCCGTTCCTCCTTGGTGTAGAGTTGGAAACACTGTGATAAAGTaGAGGTTTGTGGCTGATGATGCTGCTCCTTCTGCAGACGGACAC +
Preference number: 5 (lower is better)
Translates to: QAVPPWCRVGNTVIK*RFVADDAAPSADGH
Trigger: GTGTCCGTCTGCAGAAGGAGCAGCATCATCAGCCACAAACCTGCACTTTATCACAGTGTTTCCAACTCTACACCAAGGAGGAACGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TCTTCCAGGACACAAGTGCTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTGGGCCTGCCACTGAGCTATaGGCTGACCATGATGGGATA +
Preference number: 5 (lower is better)
Translates to: SSRTQVLKLSACLCMQSGPATEL*ADHDGI
Trigger: TATCCCATCATGGTCAGCCAATAGCTCAGTGGCAGG...CCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGTGGCCTTTCTCTGTCTaGTCATCTGCAGTGTTCTTA +
Preference number: 5 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLWPFSV*SSAVFL
Trigger: TAAGAACACTGCAGATGACAAGACAGAGAAAGGCCA...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 90 bp TTTGCTTGGTGTGTCTACAACACTGGAGTTCAATTTTCCAGGGTCTaGGTCATCTTTGAACACACCTTCCATGACAGCCAGTGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: FAWCVYNTGVQFSRV*VIFEHTFHDSQWGP
Trigger: CGGGCCCCACTGGCTGTCATGGAAGGTGTGTTCAAAGATGACTCAGACCCTGGAAAATTGAACTCCAGTGTTGTAGACACACCAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp CACTCTGGTGGGCAAGTCTACTCGACCTTGTTTTGCTGCAGTTGGTaGTGGGGAAGACAGTCTGTGATGATCCAAGCCAAATTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: HSGGQVYSTLFCCSW*WGRQSVMIQAKFQV
Trigger: CACTTGAAATTTGGCTTGGATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp CTTTCGTCTCCTTGTCCCATTCTACTACCAGTTTCACATGAGCTGTaGCGCCTGGTCCACAGGACTTTAATGCCCTTTCTACTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: LSSPCPILLPVSHEL*RLVHRTLMPFLLLG
Trigger: ACCCAACAGTAGAAAGGGCATTAAAGTCCTGTGGACCAGGCGGCACAGCTCATGTGAAACTGGTAGTAGAATGGGACAAGGAGACGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp AGGAGGAAGATGAATGCCTTCCACTTGTCCTGGAAGAATCTGCTTTaGTCCGACAGCGGGCAGGTTTCATGGAAACCTTTACAGGAACAG +
Preference number: 5 (lower is better)
Translates to: RRKMNAFHLSWKNLL*SDSGQVSWKPLQEQ
Trigger: CTGTTCCTGTAAAGGTTTCCATGAAACCTGCCCGCTGTCGGAGCAAAGCAGATTCTTCCAGGACAAGTGGAAGGCATTCATCTTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp TGCCACTCTGGTGGGCAAGTCTACTCGACCTTGTTTTGCTGCAGTTaGTGCTGGGGAAGACAGTCTGTGATGATCCAAGCCAAATTTCAA +
Preference number: 5 (lower is better)
Translates to: CHSGGQVYSTLFCCS*CWGRQSVMIQAKFQ
Trigger: TTGAAATTTGGCTTGGATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp TTGTCCTGGAAGAATCTGCTTTGCTCCGACAGCGGGCAGGTTTCATaGAAACCTTTACAGGAACAGGAGAAGAAGGAGATGGGCTTGACA +
Preference number: 5 (lower is better)
Translates to: LSWKNLLCSDSGQVS*KPLQEQEKKEMGLT
Trigger: TGTCAAGCCCATCTCCTTCTTCTCCTGTTCCTGTAAAGGTTTCCATGAAACCTGCCCGCTGTCGGAGCAAAGCAGATTCTTCCAGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGTGCTAAATGGCATCAAAAGCCTGGGAGCCGCCCAGGCATTCCAAGTCCCTTGGTCCTTAGAGACAAGTaGTTCCTTTCCAACTGCATT +
Preference number: 5 (lower is better)
Translates to: SAKWHQKPGSRPGIPSPLVLRDK*FLSNCI
Trigger: AATGCAGTTGGAAAGGAACAACTTGTCTCTAAGGAC...CAAGGGACTTGGAATGCCTGGGCGGCTCCCAGGCTTTTGATGCCATTTAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp TCTGGTGGGCAAGTCTACTCGACCTTGTTTTGCTGCAGTTGGTGCTaGGGAAGACAGTCTGTGATGATCCAAGCCAAATTTCAAGTGGTT +
Preference number: 5 (lower is better)
Translates to: SGGQVYSTLFCCSWC*GRQSVMIQAKFQVV
Trigger: AACCACTTGAAATTTGGCTTGGATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp GAGCTCTTGGTTGTGCTCTCTGGCTTCTTTGTGAGAGAATCTGAGTaGCTTGGAGGTTTCACCTCTTTGACTGGAGAGCTGTCAACAGAA +
Preference number: 5 (lower is better)
Translates to: ELLVVLSGFFVRESE*LGGFTSLTGELSTE
Trigger: TTCTGTTGACAGCTCTCCAGTCAAAGAGGTGAAACCTCCAAGCCACTCAGATTCTCTCACAAAGAAGCCAGAGAGCACAACCAAGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 90 bp ACATTTCTGTTAACACAATCTGATCAGTGGGGATCTTTGTCTCCATaGATACAGCTTCCCGAAGTCTGGCAACAGTCCCAGACAGAGGCA +
Preference number: 5 (lower is better)
Translates to: TFLLTQSDQWGSLSP*IQLPEVWQQSQTEA
Trigger: TGCCTCTGTCTGGGACTGTTGCCAGACTTCGGGAAGCTGTATCCATGGAGACAAAGATCCCCACTGATCAGATTGTGTTAACAGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTCTCCGGAACAGCCGCTaGCTGAACGAGCGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTLRNSR*LNERFS
Trigger: GGAGAAGCGCTCGTTCAGCAAGCGGCTGTTCCGGAG...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTGTCACACTGGCTTGCTaGCTTCCTGGGAGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFVTLAC*LPGSRL
Trigger: GAGCCGGCTCCCAGGAAGCAAGCAAGCCAGTGTGAC...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 90 bp AAGAAATCTTTCGTCTCCTTGTCCCATTCTACTACCAGTTTCACATaGGCTGTGCCGCCTGGTCCACAGGACTTTAATGCCCTTTCTACT +
Preference number: 5 (lower is better)
Translates to: KKSFVSLSHSTTSFT*AVPPGPQDFNALST
Trigger: AGTAGAAAGGGCATTAAAGTCCTGTGGACCAGGCGGCACAGCTCATGTGAAACTGGTAGTAGAATGGGACAAGGAGACGAAAGATTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp GGTTTGTGGCTGATGATGCTGCTCCTTCTGCAGACGGACACTCTCTaGATCAGGGATATACTCATCTTCTGTGTTCACAAACAAGAAATC +
Preference number: 5 (lower is better)
Translates to: GLWLMMLLLLQTDTL*IRDILIFCVHKQEI
Trigger: GATTTCTTGTTTGTGAACACAGAAGATGAGTATATCCCTGATGCAGAGAGTGTCCGTCTGCAGAAGGAGCAGCATCATCAGCCACAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 90 bp ACAGTAGGTCTCAAGAAATACTTCATCTTCTCCAAGATCTCCTTCTaGAGAAGGTCCCATGCTACTGTCTTCTCTAGGTGCAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: TVGLKKYFIFSKISF*RRSHATVFSRCRTK
Trigger: CTTTGTCCTGCACCTAGAGAAGACAGTAGCATGGGACCTTCTGCAGAAGGAGATCTTGGAGAAGATGAAGTATTTCTTGAGACCTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTAGCGTGGACAGCGTCTaGAGGACGCGGCTCATGAAA +
Preference number: 5 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTSVDSV*RTRLMK
Trigger: TTTCATGAGCCGCGTCCTCAAGACGCTGTCCACGCT...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TCTTCCAGGACACAAGTGCTCAAGCTTTCTGCTTGCCTCTGTATGCAAAGTGGGGGCTTGAAAAAGTTCTaGTACAAAAGTGCTACACAC +
Preference number: 5 (lower is better)
Translates to: SSRTQVLKLSACLCMQSGGLKKF*YKSATH
Trigger: GTGTGTAGCACTTTTGTACAAGAACTTTTTCAAGCC...CCCACTTTGCATACAGAGGCAAGCAGAAAGCTTGAGCACTTGTGTCCTGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp CTTCTGATGCCACTCAACAATCCACATGAAGATAAATTCTGCTCAGATGAAACCATGCCCTTTCTACTGTaGGGTGGCACAAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LLMPLNNPHEDKFCSDETMPFLL*GGTRAV
Trigger: AACAGCCCTTGTGCCACCCAACAGTAGAAAGGGCAT...GGTTTCATCTGAGCAGAATTTATCTTCATGTGGATTGTTGAGTGGCATCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTAGGCAGATCCATGGATaGGGGAGTCCCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTRQIHG*GSPLRS
Trigger: GCTTCTCAGGGGACTCCCCAATCCATGGATCTGCCT...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCGGGTCTGAGTCATCTTaGAACACACCTTCCATGACA +
Preference number: 5 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSGSESS*NTPSMT
Trigger: TGTCATGGAAGGTGTGTTCAAAGATGACTCAGACCC...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAACCCTTATCCTCAGACTaGCTGTCCCTCTTCAACCCA +
Preference number: 5 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKPLSSD*LSLFNP
Trigger: TGGGTTGAAGAGGGACAGCAAGTCTGAGGATAAGGG...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCTCTTGCCAAGATCAGTaGACCTCCGGGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSSCQDQ*TSGFLS
Trigger: AGAAAGAAACCCGGAGGTCAACTGATCTTGGCAAGA...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp CAAAACCCAACCCAGAACACTATCTTTGTATTCAACGACAACCTACAGAGGAAAGGAGGTTTCACCTCTTaGACTGGAGAGCTGTCAACA +
Preference number: 5 (lower is better)
Translates to: QNPTQNTIFVFNDNLQRKGGFTS*TGELST
Trigger: TGTTGACAGCTCTCCAGTCAAAGAGGTGAAACCTCC...TTTCCTCTGTAGGTTGTCGTTGAATACAAAGATAGTGTTCTGGGTTGGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTGGCTCAGAAGTGCCTTaGGAACTAGGGGAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFGSEVP*ELGELL
Trigger: CAAGAGCTCCCCTAGTTCCAAAGGCACTTCTGAGCC...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTCAACTGCATTTGTGTTaGGCTGCTGTGAGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTQLHLC*AAVSRE
Trigger: CTCCCGGCTCACAGCAGCCAAACACAAATGCAGTTG...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TATCAATGCTTTGCCTATGGCTGTTATTTGGTTCAATGGCAGAATAAGGCGACACCTTTCCAACTGCATTaGTGTTTGGCTGCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: YQCFAYGCYLVQWQNKATPFQLH*CLAAVS
Trigger: GCTCACAGCAGCCAAACACAAATGCAGTTGGAAAGG...TGTCGCCTTATTCTGCCATTGAACCAAATAACAGCCATAGGCAAAGCATTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TCAGATAAACTTTTTGTAGGCAGTCTGATGCTCAATGGGATGAGGACACACAGCAAATCTTTCGTCTCCTaGTCCCATTCTACTACCAGT +
Preference number: 5 (lower is better)
Translates to: SDKLFVGSLMLNGMRTHSKSFVS*SHSTTS
Trigger: ACTGGTAGTAGAATGGGACAAGGAGACGAAAGATTT...GCTGTGTGTCCTCATCCCATTGAGCATCAGACTGCCTACAAAAAGTTTATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTTTCTTACTGACTGACTaGACAGAGCTCCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFFLLTD*TELPPA
Trigger: GGCTGGTGGGAGCTCTGTCAAGTCAGTCAGTAAGAA...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTGATCAGTGGGGATCTTaGTCTCCATGGATACAGCTT +
Preference number: 5 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFDQWGS*SPWIQL
Trigger: AAGCTGTATCCATGGAGACAAAGATCCCCACTGATC...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTTGCATGGGGAAGATTCTTTTTaGGGTTGGGTAGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: RRNVSRSFSVCFLISCLHGEDSF*GWVEEE
Trigger: TTCCTCCTCTACCCAACCCAAAAAAGAATCTTCCCC...ATGCAAGCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGCAACCTAAACTCACATTCATATTCACCCACACTGATGATTAAGCCACATTTTTATGGGGTAGAGGAATaGGCAAAGAAATGCACAGAA +
Preference number: 5 (lower is better)
Translates to: SNLNSHSYSPTLMIKPHFYGVEE*AKKCTE
Trigger: TTCTGTGCATTTCTTTGCCAATTCCTCTACCCCATA...AAAATGTGGCTTAATCATCAGTGTGGGTGAATATGAATGTGAGTTTAGGTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp ATTCTAAGACTGTTTCAGGAGCTCAAAGCACATAAATGCTCAATTCCTGATACTGTGGGAACATTTCCCTaGATACACTACAGTGACATA +
Preference number: 5 (lower is better)
Translates to: ILRLFQELKAHKCSIPDTVGTFP*IHYSDI
Trigger: TATGTCACTGTAGTGTATCAAGGGAAATGTTCCCAC...AGTATCAGGAATTGAGCATTTATGTGCTTTGAGCTCCTGAAACAGTCTTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCTCCTGGCGGAATCTCTaGAGGTGTATAATAAGCACA +
Preference number: 5 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCSWRNL*RCIIST
Trigger: TGTGCTTATTATACACCTCAAGAGATTCCGCCAGGA...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp TTTCTAAGACGCAATGTTTCTCGTAGTTTCTCTGTATGCTTTTTAATCAGTTGCATGAATGCCTTCCACTaGTCCTGGAAGAATCTGCTT +
Preference number: 5 (lower is better)
Translates to: FLRRNVSRSFSVCFLISCMNAFH*SWKNLL
Trigger: AAGCAGATTCTTCCAGGACAAGTGGAAGGCATTCAT...GCAACTGATTAAAAAGCATACAGAGAAACTACGAGAAACATTGCGTCTTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS-3UTR CAA 90 bp AGCTGCAAAGTATTTCTAAGAGATTTCCACAAGCCTTGGAAAAGTGTCTTCTTTAGATCTGTACTGGGCTaGAAAAAGTTCTTGTACAAA +
Preference number: 5 (lower is better)
Translates to: SCKVFLRDFHKPWKSVFFRSVLG*KKFLYK
Trigger: TTTGTACAAGAACTTTTTCAAGCCCAGTACAGATCT...AAAGAAGACACTTTTCCAAGGCTTGTGGAAATCTCTTAGAAATACTTTGCAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp CCGCCGCGGTCCGGGGCGGCGCCCTCGGAGCTGAGGTaGGAGAGCGTGGACAGCGTCTTGAGGACGCGGCTC +
Preference number: 6 (lower is better)
Translates to: PPRSGAAPSELR*ESVDSVLRTRL
Trigger: GAGCCGCGTCCTCAAGACGCTGTCCACGCTCTCGCACCTCAGCTCCGAGGGCGCCGCCCCGGACCGCGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp GACTCCGGCTCTGGCTCCGGTCGGCCCGCCCGGTACTaGCCCAGAGCCAGGTACTCGGCGAAGAGCTCGGTG +
Preference number: 6 (lower is better)
Translates to: DSGSGSGRPARY*PRARYSAKSSV
Trigger: CACCGAGCTCTTCGCCGAGTACCTGGCTCTGGGCCAGTACCGGGCGGGCCGACCGGAGCCAGAGCCGGAGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp GGTGAACGCAGGCTGGCCATGGAGGAGCTCCGGACGTaGTTGCCATCCACTCTGTTGTCCCCTGCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: GERRLAMEELRT*LPSTLLSPALA
Trigger: GGCCAGAGCAGGGGACAACAGAGTGGATGGCAAGCACGTCCGGAGCTCCTCCATGGCCAGCCTGCGTTCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp CTCAGGGTCCCTCCCGAGTCCATAGGGCCGTCGCCATaGGGACCAATGAGATGGCAAGCTCCAGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: LRVPPESIGPSP*GPMRWQAPAAL
Trigger: CAGAGCAGCTGGAGCTTGCCATCTCATTGGTCCCCATGGCGACGGCCCTATGGACTCGGGAGGGACCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 72 bp GTCCCTCTTCAACCCAGAGCGCACACTTGTGCTAGGTaGACGCAGGCTGGCCATGGAGGAGCTCCGGACGTG +
Preference number: 6 (lower is better)
Translates to: VPLQPRAHTCAR*TQAGHGGAPDV
Trigger: CACGTCCGGAGCTCCTCCATGGCCAGCCTGCGTTCACCTAGCACAAGTGTGCGCTCTGGGTTGAAGAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp GCTCCGGACGTGCTTGCCATCCACTCTGTTGTCCCCTaGTCTGGCCTGATTCACCCGAGGGGAGCTGGGTTT +
Preference number: 6 (lower is better)
Translates to: APDVLAIHSVVP*SGLIHPRGAGF
Trigger: AAACCCAGCTCCCCTCGGGTGAATCAGGCCAGAGCAGGGGACAACAGAGTGGATGGCAAGCACGTCCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp AACGCAGGCTGGCCATGGAGGAGCTCCGGACGTGCTTaGCATCCACTCTGTTGTCCCCTGCTCTGGCCTGAT +
Preference number: 6 (lower is better)
Translates to: NAGWPWRSSGRA*HPLCCPLLWPD
Trigger: ATCAGGCCAGAGCAGGGGACAACAGAGTGGATGGCAAGCACGTCCGGAGCTCCTCCATGGCCAGCCTGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 72 bp TGCTTGCCATCCACTCTGTTGTCCCCTGCTCTGGCCTaGTTCACCCGAGGGGAGCTGGGTTTGGAGGTGGAG +
Preference number: 6 (lower is better)
Translates to: CLPSTLLSPALA*FTRGELGLEVE
Trigger: CTCCACCTCCAAACCCAGCTCCCCTCGGGTGAATCAGGCCAGAGCAGGGGACAACAGAGTGGATGGCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp TCCCCTGAGAAGCGGGAAGGAGAACTGGAGCGCATCTaGAGCTTGGCAGACAGGGACCAAGAAGGCCGCATG +
Preference number: 6 (lower is better)
Translates to: SPEKREGELERI*SLADRDQEGRM
Trigger: CATGCGGCCTTCTTGGTCCCTGTCTGCCAAGCTGCAGATGCGCTCCAGTTCTCCTTCCCGCTTCTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp GGAGGCTGCAGAAGTCACACTGGCTTGCTTGCTTCCTaGGAGCCGGCTCACCCAGTGCTCACACAGAGACGA +
Preference number: 6 (lower is better)
Translates to: GGCRSHTGLLAS*EPAHPVLTQRR
Trigger: TCGTCTCTGTGTGAGCACTGGGTGAGCCGGCTCCCAGGAAGCAAGCAAGCCAGTGTGACTTCTGCAGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp GGATTGGGGAGTCCCCTGAGAAGCGGGAAGGAGAACTaGAGCGCATCTGCAGCTTGGCAGACAGGGACCAAG +
Preference number: 6 (lower is better)
Translates to: GLGSPLRSGKEN*SASAAWQTGTK
Trigger: CTTGGTCCCTGTCTGCCAAGCTGCAGATGCGCTCCAGTTCTCCTTCCCGCTTCTCAGGGGACTCCCCAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 72 bp AAGGGTGGAGGCAGATCCATGGATTGGGGAGTCCCCTaGGAAGCGGGAAGGAGAACTGGAGCGCATCTGCAG +
Preference number: 6 (lower is better)
Translates to: KGGGRSMDWGVP*EAGRRTGAHLQ
Trigger: CTGCAGATGCGCTCCAGTTCTCCTTCCCGCTTCTCAGGGGACTCCCCAATCCATGGATCTGCCTCCACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp GGCAGAGTCCACAGGCTTAATGTGATGCTCCCCTGCTaGAGCTGCTTGCAGTGTGGGCACCTCCAGGCATCA +
Preference number: 6 (lower is better)
Translates to: GRVHRLNVMLPC*SCLQCGHLQAS
Trigger: TGATGCCTGGAGGTGCCCACACTGCAAGCAGCTGCAGCAGGGGAGCATCACATTAAGCCTGTGGACTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp TCAGGCAGAGTCCACAGGCTTAATGTGATGCTCCCCTaGTGCAGCTGCTTGCAGTGTGGGCACCTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: SGRVHRLNVMLP*CSCLQCGHLQA
Trigger: TGCCTGGAGGTGCCCACACTGCAAGCAGCTGCAGCAGGGGAGCATCACATTAAGCCTGTGGACTCTGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp CTGGCTTGCTTGCTTCCTGGGAGCCGGCTCACCCAGTaGTCACACAGAGACGAACTTGTGGAACCTGCCACT +
Preference number: 6 (lower is better)
Translates to: LACLLPGSRLTQ*SHRDELVEPAT
Trigger: AGTGGCAGGTTCCACAAGTTCGTCTCTGTGTGAGCACTGGGTGAGCCGGCTCCCAGGAAGCAAGCAAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp CACCTGCCTCGCCAATCCTTTCAAGGGTGGAGGCAGATCCATGGATaGGGGAGTCCCCTGAGAAGCGGGAAGGAGAACTGGAGCGCATCT +
Preference number: 6 (lower is better)
Translates to: HLPRQSFQGWRQIHG*GSPLRSGKENWSAS
Trigger: AGATGCGCTCCAGTTCTCCTTCCCGCTTCTCAGGGGACTCCCCAATCCATGGATCTGCCTCCACCCTTGAAAGGATTGGCGAGGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp GGGCCCGGCCCACAGCCTTGTGCTCTCGTCTATTGTGACTGTCACTaGGTTCCTGGTGACTACCAGAAAGGTTCCGCAGACTACCGAAGC +
Preference number: 6 (lower is better)
Translates to: GPGPQPCALVYCDCH*VPGDYQKGSADYRS
Trigger: GCTTCGGTAGTCTGCGGAACCTTTCTGGTAGTCACCAGGAACCAAGTGACAGTCACAATAGACGAGAGCACAAGGCTGTGGGCCGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp GCCTCGCCAATCCTTTCAAGGGTGGAGGCAGATCCATaGATTGGGGAGTCCCCTGAGAAGCGGGAAGGAGAA +
Preference number: 6 (lower is better)
Translates to: ASPILSRVEADP*IGESPEKREGE
Trigger: TTCTCCTTCCCGCTTCTCAGGGGACTCCCCAATCCATGGATCTGCCTCCACCCTTGAAAGGATTGGCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp CGCCAATCCTTTCAAGGGTGGAGGCAGATCCATGGATaGGGGAGTCCCCTGAGAAGCGGGAAGGAGAACTGG +
Preference number: 6 (lower is better)
Translates to: RQSFQGWRQIHG*GSPLRSGKENW
Trigger: CCAGTTCTCCTTCCCGCTTCTCAGGGGACTCCCCAATCCATGGATCTGCCTCCACCCTTGAAAGGATTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp GGGCTTGACAGAGAAGATTCCTGGCTAGCCAAGGCTGGCCTCCCCTaGCGCATGTTCTTCTCTGGCTCAGAAGTGCCTTTGGAACTAGGG +
Preference number: 6 (lower is better)
Translates to: GLDREDSWLAKAGLP*RMFFSGSEVPLELG
Trigger: CCCTAGTTCCAAAGGCACTTCTGAGCCAGAGAAGAACATGCGCAAGGGGAGGCCAGCCTTGGCTAGCCAGGAATCTTCTCTGTCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp CAGCTGCTTGCAGTGTGGGCACCTCCAGGCATCATCTaGAGCAAGCCGTTCCTCCTTGGTGTAGAGTTGGAA +
Preference number: 6 (lower is better)
Translates to: QLLAVWAPPGII*SKPFLLGVELE
Trigger: TTCCAACTCTACACCAAGGAGGAACGGCTTGCTCCAGATGATGCCTGGAGGTGCCCACACTGCAAGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp AGCCAAGGCTGGCCTCCCCTTGCGCATGTTCTTCTCTaGCTCAGAAGTGCCTTTGGAACTAGGGGAGCTCTT +
Preference number: 6 (lower is better)
Translates to: SQGWPPLAHVLL*LRSAFGTRGAL
Trigger: AAGAGCTCCCCTAGTTCCAAAGGCACTTCTGAGCCAGAGAAGAACATGCGCAAGGGGAGGCCAGCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp GGAGAAGAAGGAGATGGGCTTGACAGAGAAGATTCCTaGCTAGCCAAGGCTGGCCTCCCCTTGCGCATGTTC +
Preference number: 6 (lower is better)
Translates to: GEEGDGLDREDS*LAKAGLPLRMF
Trigger: GAACATGCGCAAGGGGAGGCCAGCCTTGGCTAGCCAGGAATCTTCTCTGTCAAGCCCATCTCCTTCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp GAGAAGCGGGAAGGAGAACTGGAGCGCATCTGCAGCTaGGCAGACAGGGACCAAGAAGGCCGCATGCAATTT +
Preference number: 6 (lower is better)
Translates to: EKREGELERICS*ADRDQEGRMQF
Trigger: AAATTGCATGCGGCCTTCTTGGTCCCTGTCTGCCAAGCTGCAGATGCGCTCCAGTTCTCCTTCCCGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp GAGTCCCCTGAGAAGCGGGAAGGAGAACTGGAGCGCATCTGCAGCTaGGCAGACAGGGACCAAGAAGGCCGCATGCAATTTTCATTGACA +
Preference number: 6 (lower is better)
Translates to: ESPEKREGELERICS*ADRDQEGRMQFSLT
Trigger: TGTCAATGAAAATTGCATGCGGCCTTCTTGGTCCCTGTCTGCCAAGCTGCAGATGCGCTCCAGTTCTCCTTCCCGCTTCTCAGGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp GCTGGCCTCCCCTTGCGCATGTTCTTCTCTGGCTCAGAAGTGCCTTaGGAACTAGGGGAGCTCTTGGTTGTGCTCTCTGGCTTCTTTGTG +
Preference number: 6 (lower is better)
Translates to: AGLPLRMFFSGSEVP*ELGELLVVLSGFFV
Trigger: CACAAAGAAGCCAGAGAGCACAACCAAGAGCTCCCCTAGTTCCAAAGGCACTTCTGAGCCAGAGAAGAACATGCGCAAGGGGAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp GGATCTTTGTCTCCATGGATACAGCTTCCCGAAGTCTaGCAACAGTCCCAGACAGAGGCACAGCCACACCGA +
Preference number: 6 (lower is better)
Translates to: GSLSPWIQLPEV*QQSQTEAQPHR
Trigger: TCGGTGTGGCTGTGCCTCTGTCTGGGACTGTTGCCAGACTTCGGGAAGCTGTATCCATGGAGACAAAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp AGAAGCGGGAAGGAGAACTGGAGCGCATCTGCAGCTTaGCAGACAGGGACCAAGAAGGCCGCATGCAATTTT +
Preference number: 6 (lower is better)
Translates to: RSGKENWSASAA*QTGTKKAACNF
Trigger: AAAATTGCATGCGGCCTTCTTGGTCCCTGTCTGCCAAGCTGCAGATGCGCTCCAGTTCTCCTTCCCGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp CTTTGTCATCACCTGCCTCGCCAATCCTTTCAAGGGTaGAGGCAGATCCATGGATTGGGGAGTCCCCTGAGA +
Preference number: 6 (lower is better)
Translates to: LCHHLPRQSFQG*RQIHGLGSPLR
Trigger: TCTCAGGGGACTCCCCAATCCATGGATCTGCCTCCACCCTTGAAAGGATTGGCGAGGCAGGTGATGACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp GTCGCTTGCCACTCTGGTGGGCAAGTCTACTCGACCTaGTTTTGCTGCAGTTGGTGCTGGGGAAGACAGTCT +
Preference number: 6 (lower is better)
Translates to: VACHSGGQVYST*FCCSWCWGRQS
Trigger: AGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp CGCCTGGTCCACAGGACTTTAATGCCCTTTCTACTGTaGGGTGGCACAAGGGCTGTTCTTCCTGAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: RLVHRTLMPFLL*GGTRAVLPEAA
Trigger: TGCTGCCTCAGGAAGAACAGCCCTTGTGCCACCCAACAGTAGAAAGGGCATTAAAGTCCTGTGGACCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp CACAGAGACGAACTTGTGGAACCTGCCACTGAGCTATaGGCTGACCATGATGGGATAGCTGTCCGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: HRDELVEPATEL*ADHDGIAVRLW
Trigger: CCAGAGGCGGACAGCTATCCCATCATGGTCAGCCAATAGCTCAGTGGCAGGTTCCACAAGTTCGTCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp CCCTTGCGCATGTTCTTCTCTGGCTCAGAAGTGCCTTaGGAACTAGGGGAGCTCTTGGTTGTGCTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: PLRMFFSGSEVP*ELGELLVVLSG
Trigger: GCCAGAGAGCACAACCAAGAGCTCCCCTAGTTCCAAAGGCACTTCTGAGCCAGAGAAGAACATGCGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp GCCCAGTGCAGGCCCGGTTACATACAAGCAGAACAATCTTGTCGCTaGCCACTCTGGTGGGCAAGTCTACTCGACCTTGTTTTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: AQCRPGYIQAEQSCR*PLWWASLLDLVLLQ
Trigger: CTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGATTGTTCTGCTTGTATGTAACCGGGCCTGCACTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp TGCCACTCTGGTGGGCAAGTCTACTCGACCTTGTTTTaGTGCAGTTGGTGCTGGGGAAGACAGTCTGTGATG +
Preference number: 6 (lower is better)
Translates to: CHSGGQVYSTLF*CSWCWGRQSVM
Trigger: CATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp GGTGGGCAAGTCTACTCGACCTTGTTTTGCTGCAGTTaGTGCTGGGGAAGACAGTCTGTGATGATCCAAGCC +
Preference number: 6 (lower is better)
Translates to: GGQVYSTLFCCS*CWGRQSVMIQA
Trigger: GGCTTGGATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp CCAGTGCAGGCCCGGTTACATACAAGCAGAACAATCTaGTCGCTTGCCACTCTGGTGGGCAAGTCTACTCGA +
Preference number: 6 (lower is better)
Translates to: PVQARLHTSRTI*SLATLVGKSTR
Trigger: TCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGATTGTTCTGCTTGTATGTAACCGGGCCTGCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp GGCCGTGCAGAGGTTTGCATGCTAGAAGACAGCTTTTaGGAGCCTTTCTCAGTGGTCGACCTGCTACTGGGA +
Preference number: 6 (lower is better)
Translates to: GRAEVCMLEDSF*EPFSVVDLLLG
Trigger: TCCCAGTAGCAGGTCGACCACTGAGAAAGGCTCCAAAAAGCTGTCTTCTAGCATGCAAACCTCTGCACGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp TCTTGTCGCTTGCCACTCTGGTGGGCAAGTCTACTCGACCTTGTTTaGCTGCAGTTGGTGCTGGGGAAGACAGTCTGTGATGATCCAAGC +
Preference number: 6 (lower is better)
Translates to: SCRLPLWWASLLDLV*LQLVLGKTVCDDPS
Trigger: GCTTGGATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp CCTTGCTGCCCAGTGCAGGCCCGGTTACATACAAGCAGAACAATCTaGTCGCTTGCCACTCTGGTGGGCAAGTCTACTCGACCTTGTTTT +
Preference number: 6 (lower is better)
Translates to: PCCPVQARLHTSRTI*SLATLVGKSTRPCF
Trigger: AAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGATTGTTCTGCTTGTATGTAACCGGGCCTGCACTGGGCAGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 72 bp AAGGGGCTGGTGACAGAAGATCTGGATGACAAGCTTTaGCGCTGCACGCTTCTCACGAACGGTCGAGTAGAA +
Preference number: 6 (lower is better)
Translates to: KGLVTEDLDDKL*RCTLLTNGRVE
Trigger: TTCTACTCGACCGTTCGTGAGAAGCGTGCAGCGTCAAAGCTTGTCATCCAGATCTTCTGTCACCAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp CACTCTGGTGGGCAAGTCTACTCGACCTTGTTTTGCTaGAGTTGGTGCTGGGGAAGACAGTCTGTGATGATC +
Preference number: 6 (lower is better)
Translates to: HSGGQVYSTLFC*SWCWGRQSVMI
Trigger: GATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp TGCAGGACAAAGGGCAGTCCAAATCTTTTCCCTTGCTaGCCAGTGCAGGCCCGGTTACATACAAGCAGAACA +
Preference number: 6 (lower is better)
Translates to: CRTKGSPNLFPC*PVQARLHTSRT
Trigger: TGTTCTGCTTGTATGTAACCGGGCCTGCACTGGGCAGCAAGGGAAAAGATTTGGACTGCCCTTTGTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp CTGCTACTGGGAGACAAGGGAGCTCCAGAATCTAGCTaGGAAGACTTGGATCTGCGAGCAGATAGCAAGGAA +
Preference number: 6 (lower is better)
Translates to: LLLGDKGAPESS*EDLDLRADSKE
Trigger: TTCCTTGCTATCTGCTCGCAGATCCAAGTCTTCCCAGCTAGATTCTGGAGCTCCCTTGTCTCCCAGTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp TTGCCACTCTGGTGGGCAAGTCTACTCGACCTTGTTTaGCTGCAGTTGGTGCTGGGGAAGACAGTCTGTGAT +
Preference number: 6 (lower is better)
Translates to: LPLWWASLLDLV*LQLVLGKTVCD
Trigger: ATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp CCACAGCCTTGTGCTCTCGTCTATTGTGACTGTCACTaGGTTCCTGGTGACTACCAGAAAGGTTCCGCAGAC +
Preference number: 6 (lower is better)
Translates to: PQPCALVYCDCH*VPGDYQKGSAD
Trigger: GTCTGCGGAACCTTTCTGGTAGTCACCAGGAACCAAGTGACAGTCACAATAGACGAGAGCACAAGGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp TGCAGCTTGGCAGACAGGGACCAAGAAGGCCGCATGCAATTTTCATaGACAGCCAAGGGGCTGGTGACAGAAGATCTGGATGACAAGCTT +
Preference number: 6 (lower is better)
Translates to: CSLADRDQEGRMQFS*TAKGLVTEDLDDKL
Trigger: AAGCTTGTCATCCAGATCTTCTGTCACCAGCCCCTTGGCTGTCAATGAAAATTGCATGCGGCCTTCTTGGTCCCTGTCTGCCAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp AACAATCTTGTCGCTTGCCACTCTGGTGGGCAAGTCTACTCGACCTaGTTTTGCTGCAGTTGGTGCTGGGGAAGACAGTCTGTGATGATC +
Preference number: 6 (lower is better)
Translates to: NNLVACHSGGQVYST*FCCSWCWGRQSVMI
Trigger: GATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp GGGCAAGTCTACTCGACCTTGTTTTGCTGCAGTTGGTaGTGGGGAAGACAGTCTGTGATGATCCAAGCCAAA +
Preference number: 6 (lower is better)
Translates to: GQVYSTLFCCSW*WGRQSVMIQAK
Trigger: TTTGGCTTGGATCATCACAGACTGTCTTCCCCAGCACCAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp GGCCCGGTTACATACAAGCAGAACAATCTTGTCGCTTaGCACTCTGGTGGGCAAGTCTACTCGACCTTGTTT +
Preference number: 6 (lower is better)
Translates to: GPVTYKQNNLVA*HSGGQVYSTLF
Trigger: AAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGATTGTTCTGCTTGTATGTAACCGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp ACCTCCAGGCATCATCTGGAGCAAGCCGTTCCTCCTTaGTGTAGAGTTGGAAACACTGTGATAAAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: TSRHHLEQAVPP*CRVGNTVIKCR
Trigger: CCTGCACTTTATCACAGTGTTTCCAACTCTACACCAAGGAGGAACGGCTTGCTCCAGATGATGCCTGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp AGGCCCGGTTACATACAAGCAGAACAATCTTGTCGCTaGCCACTCTGGTGGGCAAGTCTACTCGACCTTGTT +
Preference number: 6 (lower is better)
Translates to: RPGYIQAEQSCR*PLWWASLLDLV
Trigger: AACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGATTGTTCTGCTTGTATGTAACCGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp AGGTTCCGCAGACTACCGAAGCAAGAAATGGAGACTTaGTCATCACCTGCCTCGCCAATCCTTTCAAGGGTG +
Preference number: 6 (lower is better)
Translates to: RFRRLPKQEMET*SSPASPILSRV
Trigger: CACCCTTGAAAGGATTGGCGAGGCAGGTGATGACAAAGTCTCCATTTCTTGCTTCGGTAGTCTGCGGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp GCTGACTTAAAGAAGGACAGTCCCTTATCCTCAGACTaGCTGTCCCTCTTCAACCCAGAGCGCACACTTGTG +
Preference number: 6 (lower is better)
Translates to: ADLKKDSPLSSD*LSLFNPERTLV
Trigger: CACAAGTGTGCGCTCTGGGTTGAAGAGGGACAGCAAGTCTGAGGATAAGGGACTGTCCTTCTTTAAGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp GAGGAGGAAGATGAATGCCTTCCACTTGTCCTGGAAGAATCTGCTTaGCTCCGACAGCGGGCAGGTTTCATGGAAACCTTTACAGGAACA +
Preference number: 6 (lower is better)
Translates to: EEEDECLPLVLEESA*LRQRAGFMETFTGT
Trigger: TGTTCCTGTAAAGGTTTCCATGAAACCTGCCCGCTGTCGGAGCAAAGCAGATTCTTCCAGGACAAGTGGAAGGCATTCATCTTCCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp GAAGGAGATGACATGGATTCCTGGGACCTGGGGGAAGATTCTTTTTaGGGTTGGGTAGAGGAGGAAGATGAATGCCTTCCACTTGTCCTG +
Preference number: 6 (lower is better)
Translates to: EGDDMDSWDLGEDSF*GWVEEEDECLPLVL
Trigger: CAGGACAAGTGGAAGGCATTCATCTTCCTCCTCTACCCAACCCAAAAAAGAATCTTCCCCCAGGTCCCAGGAATCCATGTCATCTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp TGTCTCAAGGCTGACTTAAAGAAGGACAGTCCCTTATCCTCAGACTaGCTGTCCCTCTTCAACCCAGAGCGCACACTTGTGCTAGGTGAA +
Preference number: 6 (lower is better)
Translates to: CLKADLKKDSPLSSD*LSLFNPERTLVLGE
Trigger: TTCACCTAGCACAAGTGTGCGCTCTGGGTTGAAGAGGGACAGCAAGTCTGAGGATAAGGGACTGTCCTTCTTTAAGTCAGCCTTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp GACTTGACAGAGCTCCCACCAGCCTTTTTGGATAGCAAGGTTGTCTaGCCAAGATCAGTTGACCTCCGGGTTTCTTTCTGTCTCAAGGCT +
Preference number: 6 (lower is better)
Translates to: DLTELPPAFLDSKVV*PRSVDLRVSFCLKA
Trigger: AGCCTTGAGACAGAAAGAAACCCGGAGGTCAACTGATCTTGGCAAGACAACCTTGCTATCCAAAAAGGCTGGTGGGAGCTCTGTCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 72 bp ATGTCCAGGCCAGTCAAGGGGAACTTGACCATATTCTaGAGTTTCATACGCCTGTCTCCTTCCTGGCGGAAT +
Preference number: 6 (lower is better)
Translates to: MSRPVKGNLTIF*SFIRLSPSWRN
Trigger: ATTCCGCCAGGAAGGAGACAGGCGTATGAAACTTCAGAATATGGTCAAGTTCCCCTTGACTGGCCTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp CAAAGGGCAGTCCAAATCTTTTCCCTTGCTGCCCAGTaGAGGCCCGGTTACATACAAGCAGAACAATCTTGT +
Preference number: 6 (lower is better)
Translates to: QRAVQIFSLAAQ*RPGYIQAEQSC
Trigger: ACAAGATTGTTCTGCTTGTATGTAACCGGGCCTGCACTGGGCAGCAAGGGAAAAGATTTGGACTGCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp TTCTGCAGAAGGTCCCATGCTACTGTCTTCTCTAGGTaGAGGACAAAGGGCAGTCCAAATCTTTTCCCTTGC +
Preference number: 6 (lower is better)
Translates to: FCRRSHATVFSR*RTKGSPNLFPC
Trigger: GCAAGGGAAAAGATTTGGACTGCCCTTTGTCCTGCACCTAGAGAAGACAGTAGCATGGGACCTTCTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp CCTTGTCCCATTCTACTACCAGTTTCACATGAGCTGTaGCGCCTGGTCCACAGGACTTTAATGCCCTTTCTA +
Preference number: 6 (lower is better)
Translates to: PCPILLPVSHEL*RLVHRTLMPFL
Trigger: TAGAAAGGGCATTAAAGTCCTGTGGACCAGGCGGCACAGCTCATGTGAAACTGGTAGTAGAATGGGACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp GTTGTGCTCTCTGGCTTCTTTGTGAGAGAATCTGAGTaGCTTGGAGGTTTCACCTCTTTGACTGGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: VVLSGFFVRESE*LGGFTSLTGEL
Trigger: CAGCTCTCCAGTCAAAGAGGTGAAACCTCCAAGCCACTCAGATTCTCTCACAAAGAAGCCAGAGAGCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp TCTGGCTCAGAAGTGCCTTTGGAACTAGGGGAGCTCTaGGTTGTGCTCTCTGGCTTCTTTGTGAGAGAATCT +
Preference number: 6 (lower is better)
Translates to: SGSEVPLELGEL*VVLSGFFVRES
Trigger: AGATTCTCTCACAAAGAAGCCAGAGAGCACAACCAAGAGCTCCCCTAGTTCCAAAGGCACTTCTGAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp GATGAATGCCTTCCACTTGTCCTGGAAGAATCTGCTTaGCTCCGACAGCGGGCAGGTTTCATGGAAACCTTT +
Preference number: 6 (lower is better)
Translates to: DECLPLVLEESA*LRQRAGFMETF
Trigger: AAAGGTTTCCATGAAACCTGCCCGCTGTCGGAGCAAAGCAGATTCTTCCAGGACAAGTGGAAGGCATTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp GACATGGATTCCTGGGACCTGGGGGAAGATTCTTTTTaGGGTTGGGTAGAGGAGGAAGATGAATGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: DMDSWDLGEDSF*GWVEEEDECLP
Trigger: TGGAAGGCATTCATCTTCCTCCTCTACCCAACCCAAAAAAGAATCTTCCCCCAGGTCCCAGGAATCCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp ATGTTCTTCTCTGGCTCAGAAGTGCCTTTGGAACTAGGGGAGCTCTaGGTTGTGCTCTCTGGCTTCTTTGTGAGAGAATCTGAGTGGCTT +
Preference number: 6 (lower is better)
Translates to: MFFSGSEVPLELGEL*VVLSGFFVRESEWL
Trigger: AAGCCACTCAGATTCTCTCACAAAGAAGCCAGAGAGCACAACCAAGAGCTCCCCTAGTTCCAAAGGCACTTCTGAGCCAGAGAAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 72 bp CATGAGGTGTCATGTCCAGGCCAGTCAAGGGGAACTTaGCCATATTCTGAAGTTTCATACGCCTGTCTCCTT +
Preference number: 6 (lower is better)
Translates to: HEVSCPGQSRGT*PYSEVSYACLL
Trigger: AAGGAGACAGGCGTATGAAACTTCAGAATATGGTCAAGTTCCCCTTGACTGGCCTGGACATGACACCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp CCTCCTTGGTGTAGAGTTGGAAACACTGTGATAAAGTaGAGGTTTGTGGCTGATGATGCTGCTCCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: PPWCRVGNTVIK*RFVADDAAPSA
Trigger: TGCAGAAGGAGCAGCATCATCAGCCACAAACCTGCACTTTATCACAGTGTTTCCAACTCTACACCAAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp ATGAATGCCTTCCACTTGTCCTGGAAGAATCTGCTTTaGTCCGACAGCGGGCAGGTTTCATGGAAACCTTTA +
Preference number: 6 (lower is better)
Translates to: MNAFHLSWKNLL*SDSGQVSWKPL
Trigger: TAAAGGTTTCCATGAAACCTGCCCGCTGTCGGAGCAAAGCAGATTCTTCCAGGACAAGTGGAAGGCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp TTAACACAATCTGATCAGTGGGGATCTTTGTCTCCATaGATACAGCTTCCCGAAGTCTGGCAACAGTCCCAG +
Preference number: 6 (lower is better)
Translates to: LTQSDQWGSLSP*IQLPEVWQQSQ
Trigger: CTGGGACTGTTGCCAGACTTCGGGAAGCTGTATCCATGGAGACAAAGATCCCCACTGATCAGATTGTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp ATACAAGCAGAACAATCTTGTCGCTTGCCACTCTGGTaGGCAAGTCTACTCGACCTTGTTTTGCTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: IQAEQSCRLPLW*ASLLDLVLLQL
Trigger: CAACTGCAGCAAAACAAGGTCGAGTAGACTTGCCCACCAGAGTGGCAAGCGACAAGATTGTTCTGCTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp AGTTATTCCCACGACACTGACCACACGCAAACTGAATaGGCATACCTGGATGCTGACAGTAGGTCTCAAGAA +
Preference number: 6 (lower is better)
Translates to: SYSHDTDHTQTE*AYLDADSRSQE
Trigger: TTCTTGAGACCTACTGTCAGCATCCAGGTATGCCCATTCAGTTTGCGTGTGGTCAGTGTCGTGGGAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp AAGAATCTGCTTTGCTCCGACAGCGGGCAGGTTTCATaGAAACCTTTACAGGAACAGGAGAAGAAGGAGATG +
Preference number: 6 (lower is better)
Translates to: KNLLCSDSGQVS*KPLQEQEKKEM
Trigger: CATCTCCTTCTTCTCCTGTTCCTGTAAAGGTTTCCATGAAACCTGCCCGCTGTCGGAGCAAAGCAGATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp AGCCACACCGATCCTCATGCAGTGGGAACATTTCCCTaGATACACTACAGTGACATAGAGAGGCCTTGTATG +
Preference number: 6 (lower is better)
Translates to: SHTDPHAVGTFP*IHYSDIERPCM
Trigger: CATACAAGGCCTCTCTATGTCACTGTAGTGTATCAAGGGAAATGTTCCCACTGCATGAGGATCGGTGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp GGCTTCTTTGTGAGAGAATCTGAGTGGCTTGGAGGTTTCACCTCTTaGACTGGAGAGCTGTCAACAGAATCACTCTGGTCCACATATGCA +
Preference number: 6 (lower is better)
Translates to: GFFVRESEWLGGFTS*TGELSTESLWSTYA
Trigger: TGCATATGTGGACCAGAGTGATTCTGTTGACAGCTCTCCAGTCAAAGAGGTGAAACCTCCAAGCCACTCAGATTCTCTCACAAAGAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 90 bp TGGCCTTTCTCTGTCTTGTCATCTGCAGTGTTCTTACTGACTGACTaGACAGAGCTCCCACCAGCCTTTTTGGATAGCAAGGTTGTCTTG +
Preference number: 6 (lower is better)
Translates to: WPFSVLSSAVFLLTD*TELPPAFLDSKVVL
Trigger: CAAGACAACCTTGCTATCCAAAAAGGCTGGTGGGAGCTCTGTCAAGTCAGTCAGTAAGAACACTGCAGATGACAAGACAGAGAAAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS GCA 72 bp CTGATGATGCTGCTCCTTCTGCAGACGGACACTCTCTaGATCAGGGATATACTCATCTTCTGTGTTCACAAA +
Preference number: 6 (lower is better)
Translates to: LMMLLLLQTDTL*IRDILIFCVHK
Trigger: TTTGTGAACACAGAAGATGAGTATATCCCTGATGCAGAGAGTGTCCGTCTGCAGAAGGAGCAGCATCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CAA 72 bp TCTGTCTTGTCATCTGCAGTGTTCTTACTGACTGACTaGACAGAGCTCCCACCAGCCTTTTTGGATAGCAAG +
Preference number: 6 (lower is better)
Translates to: SVLSSAVFLLTD*TELPPAFLDSK
Trigger: CTTGCTATCCAAAAAGGCTGGTGGGAGCTCTGTCAAGTCAGTCAGTAAGAACACTGCAGATGACAAGACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS TCA 72 bp TGTGTCTACAACACTGGAGTTCAATTTTCCAGGGTCTaGGTCATCTTTGAACACACCTTCCATGACAGCCAG +
Preference number: 6 (lower is better)
Translates to: CVYNTGVQFSRV*VIFEHTFHDSQ
Trigger: CTGGCTGTCATGGAAGGTGTGTTCAAAGATGACTCAGACCCTGGAAAATTGAACTCCAGTGTTGTAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7
CDS CCA 72 bp ACCTCTTTGACTGGAGAGCTGTCAACAGAATCACTCTaGTCCACATATGCAATCTGGTTATTATTATCAAAA +
Preference number: 6 (lower is better)
Translates to: TSLTGELSTESL*STYAIWLLLSK
Trigger: TTTTGATAATAATAACCAGATTGCATATGTGGACCAGAGTGATTCTGTTGACAGCTCTCCAGTCAAAGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046929.7