Pregenerated sensors for USP30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029592Ensembl transcript IDs: ENSMUST00000031588.12, ENSMUST00000200119.3, ENSMUST00000202603.4
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCACTaGTGCAGGCTGCAAGAGAGTGAGGCAGCTCCATTAGCAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AHLCACQATRLRSQH*CRLQESEAAPLAAE Trigger: CTCAGCTGCTAATGGAGCTGCCTCACTCTCTTGCAGCCTGCAGCAGTGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 90 bp | ATGGTTGCGACCACATCGGCGAGCACAGAGATGACGAGCGAGAACTaGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: MVATTSASTEMTSEN*LRGAPSRLSPLALA Trigger: TGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTCTCGCTCGTCATCTCTGTGCTCGCCGATGTGGTCGCAACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 90 bp | GGGCTGGCTTGCACGTGTACACGTGGCATGCCTTTGCTTTTATCCTaGACAGTGTGGACCTCACCATGGGCCCTGGCTCTGGGCTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: GLACTCTRGMPLLLS*TVWTSPWALALGWP Trigger: AGGCCAGCCCAGAGCCAGGGCCCATGGTGAGGTCCACACTGTCCAGGATAAAAGCAAAGGCATGCCACGTGTACACGTGCAAGCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR GCA 90 bp | AGGCTGAGGGCTCTAGAGGGCTGGCTTGCACGTGTACACGTGGCATaGCTTTGCTTTTATCCTGGACAGTGTGGACCTCACCATGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: RLRALEGWLARVHVA*LCFYPGQCGPHHGP Trigger: GGGCCCATGGTGAGGTCCACACTGTCCAGGATAAAAGCAAAGGCATGCCACGTGTACACGTGCAAGCCAGCCCTCTAGAGCCCTCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR TCA 90 bp | CTTCCGAAGCGGATCAGAGGTGCAGATGACACAGCTCAGGAAGAGTaGTCACTCCTGGTCCTCCGTGGGCGGCACAGGGAACTCGAGATT | + |
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Preference number: 1 (lower is better) Translates to: LPKRIRGADDTAQEE*SLLVLRGRHRELEI Trigger: AATCTCGAGTTCCCTGTGCCGCCCACGGAGGACCAGGAGTGATCACTCTTCCTGAGCTGTGTCATCTGCACCTCTGATCCGCTTCGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 90 bp | CACACAGGACATCTTCCAGTTCACCCTGGCAGTGCTGTGTGGGTCTaGCTCCCTTGTGGAGCCTGCTCTCAGAATACACAGAAGGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: HTGHLPVHPGSAVWV*LPCGACSQNTQKAE Trigger: CTCAGCCTTCTGTGTATTCTGAGAGCAGGCTCCACAAGGGAGCCAGACCCACACAGCACTGCCAGGGTGAACTGGAAGATGTCCTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 90 bp | GGATCAGAGGTGCAGATGACACAGCTCAGGAAGAGTGATCACTCCTaGTCCTCCGTGGGCGGCACAGGGAACTCGAGATTACAAAAGGCG | + |
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Preference number: 1 (lower is better) Translates to: GSEVQMTQLRKSDHS*SSVGGTGNSRLQKA Trigger: CGCCTTTTGTAATCTCGAGTTCCCTGTGCCGCCCACGGAGGACCAGGAGTGATCACTCTTCCTGAGCTGTGTCATCTGCACCTCTGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR GCA 90 bp | GGCTGGCCTAGAACTTGCAGTGATCCTCCTGCCTCAGTCTCCACGTaGTGGGATGCCAGGTTGAGCCACCACACTGTTTTAGGCATTCTT | + |
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Preference number: 1 (lower is better) Translates to: GWPRTCSDPPASVST*WDARLSHHTVLGIL Trigger: AAGAATGCCTAAAACAGTGTGGTGGCTCAACCTGGCATCCCAGCACGTGGAGACTGAGGCAGGAGGATCACTGCAAGTTCTAGGCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 90 bp | GAGCCTGCTCTCAGAATACACAGAAGGCTGAGGGCTCTAGAGGGCTaGCTTGCACGTGTACACGTGGCATGCCTTTGCTTTTATCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: EPALRIHRRLRALEG*LARVHVACLCFYPG Trigger: TCCAGGATAAAAGCAAAGGCATGCCACGTGTACACGTGCAAGCCAGCCCTCTAGAGCCCTCAGCCTTCTGTGTATTCTGAGAGCAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR GCA 90 bp | TGCTCTCAGAATACACAGAAGGCTGAGGGCTCTAGAGGGCTGGCTTaGACGTGTACACGTGGCATGCCTTTGCTTTTATCCTGGACAGTG | + |
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Preference number: 1 (lower is better) Translates to: CSQNTQKAEGSRGLA*TCTRGMPLLLSWTV Trigger: CACTGTCCAGGATAAAAGCAAAGGCATGCCACGTGTACACGTGCAAGCCAGCCCTCTAGAGCCCTCAGCCTTCTGTGTATTCTGAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR TCA 90 bp | GAGGCTTTCTTTATTGAGCTTGCTTGTCTTAAGAGGGTGAGTCTGTaGTCATCCTGGCAGGGGGAACAGACAGGCATGGCACTGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: EAFFIELACLKRVSL*SSWQGEQTGMALAP Trigger: TGGTGCCAGTGCCATGCCTGTCTGTTCCCCCTGCCAGGATGATCACAGACTCACCCTCTTAAGACAAGCAAGCTCAATAAAGAAAGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 90 bp | TCTGGAATGTCTGCCAGCTCACCCCCGGCAGAGAAAACACATCCTTaGCCTTACCTCAGTGACCTTTGGATAGGTCAGGTTCCAAACCTT | + |
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Preference number: 1 (lower is better) Translates to: SGMSASSPPAEKTHP*PYLSDLWIGQVPNL Trigger: AAGGTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTAAGGCCAAGGATGTGTTTTCTCTGCCGGGGGTGAGCTGGCAGACATTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR TCA 90 bp | GTGCTGGGATGCCAGGTTGAGCCACCACACTGTTTTAGGCATTCTTaGACTATTCTTTTGGCCTCTGAGGAGCCTGGAAGGACAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: VLGCQVEPPHCFRHS*TILLASEEPGRTRL Trigger: AAGCCTTGTCCTTCCAGGCTCCTCAGAGGCCAAAAGAATAGTTCAAGAATGCCTAAAACAGTGTGGTGGCTCAACCTGGCATCCCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR GCA 90 bp | AGCCAAACTGCAGGATTTTGCTCCACTTCTGCTCAGGTATCATGCTaGTTCCGTCCTTACCGTAGGCTGACTGAGAAAGCAAGGTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SQTAGFCSTSAQVSC*FRPYRRLTEKARSR Trigger: TCTGGACCTTGCTTTCTCAGTCAGCCTACGGTAAGGACGGAAGCAGCATGATACCTGAGCAGAAGTGGAGCAAAATCCTGCAGTTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 90 bp | AGGTTGAGCCACCACACTGTTTTAGGCATTCTTGAACTATTCTTTTaGCCTCTGAGGAGCCTGGAAGGACAAGGCTTTCCCAGCGTCACA | + |
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Preference number: 1 (lower is better) Translates to: RLSHHTVLGILELFF*PLRSLEGQGFPSVT Trigger: TGTGACGCTGGGAAAGCCTTGTCCTTCCAGGCTCCTCAGAGGCCAAAAGAATAGTTCAAGAATGCCTAAAACAGTGTGGTGGCTCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR GCA 90 bp | TGTGTGCATGTGTGTGCACATATGTGGACATATGTGTGTGTTATGTaGATGCACAGGGAGGCCAGAGGTGCCAGATCACCTGGTACTATA | + |
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Preference number: 1 (lower is better) Translates to: CVHVCAHMWTYVCVM*MHREARGARSPGTI Trigger: TATAGTACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCACATAACACACACATATGTCCACATATGTGCACACACATGCACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR TCA 90 bp | GTAATAATTTACAAAATGAGGAAGGACATTAGCGCTCGGTCAGGGTaGCACATCTACAGCGGCTCACGCACACAATTGTCCTCTCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: VIIYKMRKDISARSG*HIYSGSRTQLSSQP Trigger: TGGCTGAGAGGACAATTGTGTGCGTGAGCCGCTGTAGATGTGTCACCCTGACCGAGCGCTAATGTCCTTCCTCATTTTGTAAATTATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR GCA 90 bp | ATTACAGCAGAGAAAAGGTGGCTTCTGGGATCTGCTTCTTTTCATTaGCTCTGTCAGGTAAGACGCTCTAGACACACAGGACATCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: ITAEKRWLLGSASFH*LCQVRRSRHTGHLP Trigger: TGGAAGATGTCCTGTGTGTCTAGAGCGTCTTACCTGACAGAGGCAATGAAAAGAAGCAGATCCCAGAAGCCACCTTTTCTCTGCTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 90 bp | CTAAGAGCCATTTTTAATAGTCAGTGCTCTGTGCTTTCTCTTAGCTaGAAGGAGTTGGTGTTTGCTTTACCACAGAGAACAGGAAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: LRAIFNSQCSVLSLS*KELVFALPQRTGKV Trigger: AACCTTTCCTGTTCTCTGTGGTAAAGCAAACACCAACTCCTTCCAGCTAAGAGAAAGCACAGAGCACTGACTATTAAAAATGGCTCTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 90 bp | GAAGTAGGTGCCTACTGTGAAGAACTTAAAACTAGGAGCCATCATTaGTCATTACCTAATGTAATAATTTACAAAATGAGGAAGGACATT | + |
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Preference number: 1 (lower is better) Translates to: EVGAYCEELKTRSHH*SLPNVIIYKMRKDI Trigger: AATGTCCTTCCTCATTTTGTAAATTATTACATTAGGTAATGACCAATGATGGCTCCTAGTTTTAAGTTCTTCACAGTAGGCACCTACTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR GCA 90 bp | CCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCAGAGCAGCAGGACTGGTaGCTGGGGCCCACAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PRPGSPVRLPGYEVAKPAEQQDW*LGPTAL Trigger: CAGGGCTGTGGGCCCCAGGCACCAGTCCTGCTGCTC...TGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | CCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCAGTGTGGACCTCACCATaGGCCCTGGCTCTGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PRPGSPVRLPGYEVAKPAVWTSP*ALALGW Trigger: CCAGCCCAGAGCCAGGGCCCATGGTGAGGTCCACAC...TGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR GCA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTTGGGGCCCACAGCCCTaGACGGTGCTCTATGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVWGPQP*TVLYGH Trigger: GTGACCATAGAGCACCGTGCAGGGCTGTGGGCCCCA...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTATGACGAGCGAGAACTaGCTCCGGGGAGCCCCATCG | + |
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Preference number: 2 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVMTSEN*LRGAPS Trigger: CGATGGGGCTCCCCGGAGCCAGTTCTCGCTCGTCAT...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR GCA 90 bp | CCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCAAGTTCACCCTGGCAGTaGTGTGTGGGTCTGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PRPGSPVRLPGYEVAKPASSPWQ*CVGLAP Trigger: GGGAGCCAGACCCACACAGCACTGCCAGGGTGAACT...TGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | GAACTGGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACCAGGAGCAGCAGGACTaGTGCCTGGGGCCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: ELAPGSPIASVSFGACRDQEQQD*CLGPTA Trigger: GGCTGTGGGCCCCAGGCACCAGTCCTGCTGCTCCTG...GTCTCTGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR GCA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTCAGGGAGGCCAGAGGTaGCAGATCACCTGGTACTAT | + |
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Preference number: 2 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVQGGQR*QITWYY Trigger: ATAGTACCAGGTGATCTGGCACCTCTGGCCTCCCTG...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR GCA 90 bp | GAACTGGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACTGGAGGTGGTCAGGCTaGAGCTGGCACACGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ELAPGSPIASVSFGACRDWRWSG*SWHTEA Trigger: GGCTTCCGTGTGCCAGCTGCAGCCTGACCACCTCCA...GTCTCTGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | CCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCATCTTCCAGTTCACCCTaGCAGTGCTGTGTGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PRPGSPVRLPGYEVAKPASSSSP*QCCVGL Trigger: CAGACCCACACAGCACTGCCAGGGTGAACTGGAAGA...TGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | CCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCATCCATGAGGCTAGTCTaGAAAGGGGAGAGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PRPGSPVRLPGYEVAKPASMRLV*KGERPS Trigger: ACTGGGCCTCTCCCCTTTCCAGACTAGCCTCATGGA...TGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR TCA 90 bp | GAACTGGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACCCAGCGTCACAGCTGTaGCTCTCAGGTCACGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: ELAPGSPIASVSFGACRDPASQL*LSGHAW Trigger: CCAAGCGTGACCTGAGAGTCACAGCTGTGACGCTGG...GTCTCTGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR GCA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGTGTGTGTTATGTGCATaGACAGGGAGGCCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: TRGRAHLCACQATRLRSQCVLCA*TGRPEV Trigger: CACCTCTGGCCTCCCTGTGCATGCACATAACACACA...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR TCA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCCAAAGGCTGCCCTCTaGGAACACCTAGCATATTAC | + |
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Preference number: 2 (lower is better) Translates to: TRGRAHLCACQATRLRSQPKAAL*EHLAYY Trigger: GTAATATGCTAGGTGTTCTCAGAGGGCAGCCTTTGG...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR TCA 90 bp | CCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCATATTCTTTTGGCCTCTaGGGAGCCTGGAAGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: PRPGSPVRLPGYEVAKPAYSFGL*GAWKDK Trigger: CTTGTCCTTCCAGGCTCCTCAGAGGCCAAAAGAATA...TGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR GCA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTCTCCCTTGTGGAGCCTaGTCTCAGAATACACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVLPCGA*SQNTQK Trigger: CTTCTGTGTATTCTGAGAGCAGGCTCCACAAGGGAG...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | CGGCACAAAGACTCTCGAGGGAAGAGGCCCCGGAGGACAGTGGAGGTGGTCAGGAGGGCTCTAGAGGGCTaGCTTGCACGTGTACACGTG | + |
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Preference number: 2 (lower is better) Translates to: RHKDSRGKRPRRTVEVVRRALEG*LARVHV Trigger: CACGTGTACACGTGCAAGCCAGCCCTCTAGAGCCCT...CCTGACCACCTCCACTGTCCTCCGGGGCCTCTTCCCTCGAGAGTCTTTGTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR GCA 90 bp | GAACTGGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACGGCTGGCCTAGAACTTaGAGTGATCCTCCTGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: ELAPGSPIASVSFGACRDGWPRT*SDPPAS Trigger: TGAGGCAGGAGGATCACTGCAAGTTCTAGGCCAGCC...GTCTCTGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR GCA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGTATGTGTGTGTTATGTaGATGCACAGGGAGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: TRGRAHLCACQATRLRSQYVCVM*MHREAR Trigger: TCTGGCCTCCCTGTGCATGCACATAACACACACATA...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCTCTCAGGTCACGCTTaGTCTCACAACAATGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TRGRAHLCACQATRLRSQLSGHA*SHNNGK Trigger: TTTCCCATTGTTGTGAGACCAAGCGTGACCTGAGAG...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGTACCTCAGTGACCTTTaGATAGGTCAGGTTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TRGRAHLCACQATRLRSQYLSDL*IGQVPN Trigger: GTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTA...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTCTAAAGCACCGCACTTaGCTGTTTCCTAACAAAACC | + |
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Preference number: 2 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVLKHRT*LFPNKT Trigger: GGTTTTGTTAGGAAACAGCCAAGTGCGGTGCTTTAG...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGTGCTTTCTCTTAGCTaGAAGGAGTTGGTGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVVLSLS*KELVFA Trigger: AGCAAACACCAACTCCTTCCAGCTAAGAGAAAGCAC...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTACACAGGTACTAATGTaGAGACAAATCTGTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVTQVLM*RQICPA Trigger: GGCTGGACAGATTTGTCTCCACATTAGTACCTGTGT...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR TCA 90 bp | CGGCACAAAGACTCTCGAGGGAAGAGGCCCCGGAGGACAGTGGAGGTGGTCAGGCTCTATGGTCACAAGTaGCTGCCGGCTTTTGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: RHKDSRGKRPRRTVEVVRLYGHK*LPAFVF Trigger: GAACACAAAAGCCGGCAGTCACTTGTGACCATAGAG...CCTGACCACCTCCACTGTCCTCCGGGGCCTCTTCCCTCGAGAGTCTTTGTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGCCTGGCAGTGCTGTGTaGGTCTGGCTCCCTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RQGLVRALETSKPSPTTMPGSAV*VWLPCG Trigger: TCCACAAGGGAGCCAGACCCACACAGCACTGCCAGG...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | GAACTGGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACGAGAAAACACATCCTTaGCCTTACCTCAGTGACCTT | + |
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Preference number: 2 (lower is better) Translates to: ELAPGSPIASVSFGACRDEKTHP*PYLSDL Trigger: AAGGTCACTGAGGTAAGGCCAAGGATGTGTTTTCTC...GTCTCTGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR GCA 90 bp | ATCATCCTGGCAGGGGGAACAGACAGGCATGGCACTGGCACCATAGCAGGCAAGGTGCAAACAGGACCCTaGAGAGACCATTCTCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: IILAGGTDRHGTGTIAGKVQTGP*RDHSHS Trigger: AGAATGAGAATGGTCTCTGCAGGGTCCTGTTTGCAC...CTTGCCTGCTATGGTGCCAGTGCCATGCCTGTCTGTTCCCCCTGCCAGGATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR CCA 90 bp | GAACTGGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACAGAAAAGGTGGCTTCTaGGATCTGCTTCTTTTCATT | + |
|
Preference number: 2 (lower is better) Translates to: ELAPGSPIASVSFGACRDRKGGF*DLLLFI Trigger: AATGAAAAGAAGCAGATCCCAGAAGCCACCTTTTCT...GTCTCTGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR CCA 90 bp | CATCCTTGGCCTTACCTCAGTGACCTTTGGATAGGTCAGGTTCCAAACCTTAGAGAGAGACTGCCACCCTaGGTTAGGGCCTGCTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: HPWPYLSDLWIGQVPNLRERLPP*VRACSS Trigger: GGAAGAGCAGGCCCTAACCCAGGGTGGCAGTCTCTC...TCTAAGGTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTAAGGCCAAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR CCA 90 bp | TATGTGTGTGTTATGTGCATGCACAGGGAGGCCAGAGGTGCCAGATCACCTGGTAGGAGGAGGATGCCATaGGACACCCACCAAAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: YVCVMCMHREARGARSPGRRRMP*DTHQKD Trigger: GTCTTTTTGGTGGGTGTCCCATGGCATCCTCCTCCT...ACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCACATAACACACACATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGACAGCAGAGAAAAGGTaGCTTCTGGGATCTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RQGLVRALETSKPSPTTMTAEKR*LLGSAS Trigger: AGAAGCAGATCCCAGAAGCCACCTTTTCTCTGCTGT...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTTGGCCTTACCTCAGTGACCTTTGGATAGGTCAGGTTCCAAACCTTAGAACAGCTCAGGAAGAGTaGTCACTCCTGGTCCTCCGT | + |
|
Preference number: 2 (lower is better) Translates to: HPWPYLSDLWIGQVPNLRTAQEE*SLLVLR Trigger: ACGGAGGACCAGGAGTGATCACTCTTCCTGAGCTGT...TCTAAGGTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTAAGGCCAAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR TCA 90 bp | GTCTGTGGGGCTGCTGTGTCGTGGAGTCCAGCACAGCATAGTCTCAGAGTCTCAGTACCGTTTGCTTATTaGAACCATGAGAGTCACACA | + |
|
Preference number: 2 (lower is better) Translates to: VCGAAVSWSPAQHSLRVSVPFAY*NHESHT Trigger: TGTGTGACTCTCATGGTTTCAATAAGCAAACGGTAC...TGAGACTCTGAGACTATGCTGTGCTGGACTCCACGACACAGCAGCCCCACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR GCA 90 bp | GATTGCTTGCTTGCCCACTGTAGGTACAAAGATGGTTGCGACCACATCGGCGAGCACGTGGCATGCCTTTaGTTTTATCCTGGACAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: DCLLAHCRYKDGCDHIGEHVACL*FYPGQC Trigger: ACACTGTCCAGGATAAAAGCAAAGGCATGCCACGTG...CTCGCCGATGTGGTCGCAACCATCTTTGTACCTACAGTGGGCAAGCAAGCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | GTGCATGCACAGGGAGGCCAGAGGTGCCAGATCACCTGGTACTATAGTTATGGGCTTGAACTATTCTTTTaGCCTCTGAGGAGCCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VHAQGGQRCQITWYYSYGLELFF*PLRSLE Trigger: TTCCAGGCTCCTCAGAGGCCAAAAGAATAGTTCAAG...CCCATAACTATAGTACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR TCA 90 bp | TATGTGTGTGTTATGTGCATGCACAGGGAGGCCAGAGGTGCCAGATCACCTGGTTGTTTTAGGCATTCTTaGACTATTCTTTTGGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YVCVMCMHREARGARSPGCFRHS*TILLAS Trigger: AGAGGCCAAAAGAATAGTTCAAGAATGCCTAAAACA...ACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCACATAACACACACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CCA 90 bp | TTACCTAATGTAATAATTTACAAAATGAGGAAGGACATTAGCGCTCGGTCAGGGATGCCTAGGCACATCTaGAATGTCTGCCAGCTCACC | + |
|
Preference number: 2 (lower is better) Translates to: LPNVIIYKMRKDISARSGMPRHI*NVCQLT Trigger: GGTGAGCTGGCAGACATTCCAGATGTGCCTAGGCAT...CCCTGACCGAGCGCTAATGTCCTTCCTCATTTTGTAAATTATTACATTAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR CCA 90 bp | TTACCTAATGTAATAATTTACAAAATGAGGAAGGACATTAGCGCTCGGTCAGGGCCTTTGCTTTTATCCTaGACAGTGTGGACCTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: LPNVIIYKMRKDISARSGPLLLS*TVWTSP Trigger: TGGTGAGGTCCACACTGTCCAGGATAAAAGCAAAGG...CCCTGACCGAGCGCTAATGTCCTTCCTCATTTTGTAAATTATTACATTAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR GCA 90 bp | TTACCTAATGTAATAATTTACAAAATGAGGAAGGACATTAGCGCTCGGTCAGGGTCTGCTTCTTTTCATTaGCTCTGTCAGGTAAGACGC | + |
|
Preference number: 2 (lower is better) Translates to: LPNVIIYKMRKDISARSGSASFH*LCQVRR Trigger: GCGTCTTACCTGACAGAGGCAATGAAAAGAAGCAGA...CCCTGACCGAGCGCTAATGTCCTTCCTCATTTTGTAAATTATTACATTAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | ACACTCAGCACGGACACCCGAGGCCGGGCTCACCTGTaGGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TLSTDTRGRAHL*ACQATRLRSQH Trigger: GTGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTGAGTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | GCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTaGGAAGCCAGCACTGCTGCAGGCTGCAAGAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: AGLTCAPARLRG*EASTAAGCKRV Trigger: CACTCTCTTGCAGCCTGCAGCAGTGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR-3UTR CAA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTAGTGACTGCCGGCTTTaGTGTTCATCTCAGCCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVSDCRL*CSSQPG Trigger: TCCGGGCTGAGATGAACACAAAAGCCGGCAGTCACT...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR CCA 72 bp | ACAAAGACTCTCGAGGGAAGAGGCCCCGGAGGACAGTaGAGGTGGTCAGGCTGCAGCTGGCACACGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TKTLEGRGPGGQ*RWSGCSWHTEA Trigger: GGCTTCCGTGTGCCAGCTGCAGCCTGACCACCTCCACTGTCCTCCGGGGCCTCTTCCCTCGAGAGTCTTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR TCA 72 bp | CAAAGATGGTTGCGACCACATCGGCGAGCACAGAGATaGCGAGCGAGAACTGGCTCCGGGGAGCCCCATCGC | + |
|
Preference number: 3 (lower is better) Translates to: QRWLRPHRRAQR*RARTGSGEPHR Trigger: GCGATGGGGCTCCCCGGAGCCAGTTCTCGCTCGTCATCTCTGTGCTCGCCGATGTGGTCGCAACCATCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR CCA 72 bp | ACCACATCGGCGAGCACAGAGATGACGAGCGAGAACTaGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TTSASTEMTSEN*LRGAPSRLSPL Trigger: CAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTCTCGCTCGTCATCTCTGTGCTCGCCGATGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR CAA 90 bp | CCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCAGGAAGGAGTTGGTGTTaGCTTTACCACAGAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: PRPGSPVRLPGYEVAKPAGRSWC*LYHREQ Trigger: CTGTTCTCTGTGGTAAAGCAAACACCAACTCCTTCC...TGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | TGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCACTaGTGCAGGCTGCAAGAGAGTGAGGCAGCTCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: CACQATRLRSQH*CRLQESEAAPL Trigger: TAATGGAGCTGCCTCACTCTCTTGCAGCCTGCAGCAGTGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTATCTGCTTCTTTTCATaGCCTCTGTCAGGTAAGACG | + |
|
Preference number: 3 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVICFFS*PLSGKT Trigger: CGTCTTACCTGACAGAGGCAATGAAAAGAAGCAGAT...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR TCA 72 bp | CGGATCAGAGGTGCAGATGACACAGCTCAGGAAGAGTaGTCACTCCTGGTCCTCCGTGGGCGGCACAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RIRGADDTAQEE*SLLVLRGRHRE Trigger: TTCCCTGTGCCGCCCACGGAGGACCAGGAGTGATCACTCTTCCTGAGCTGTGTCATCTGCACCTCTGATCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR CCA 72 bp | CAGCCCGGAAGCCAGGTCTGTGGGGCTGCTGTGTCGTaGAGTCCAGCACAGCATAGTCTCAGAGTCTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QPGSQVCGAAVS*SPAQHSLRVSS Trigger: ACTTGAGACTCTGAGACTATGCTGTGCTGGACTCCACGACACAGCAGCCCCACAGACCTGGCTTCCGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR CCA 72 bp | TGGTGCCTGGGGCCCACAGCCCTGCACGGTGCTCTATaGTCACAAGTGACTGCCGGCTTTTGTGTTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: WCLGPTALHGAL*SQVTAGFCVHL Trigger: GAGATGAACACAAAAGCCGGCAGTCACTTGTGACCATAGAGCACCGTGCAGGGCTGTGGGCCCCAGGCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR TCA 72 bp | GCCTGGAAGGACAAGGCTTTCCCAGCGTCACAGCTGTaGCTCTCAGGTCACGCTTGGTCTCACAACAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: AWKDKAFPASQL*LSGHAWSHNNG Trigger: CCCATTGTTGTGAGACCAAGCGTGACCTGAGAGTCACAGCTGTGACGCTGGGAAAGCCTTGTCCTTCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR GCA 72 bp | GAGGGCTGGCTTGCACGTGTACACGTGGCATGCCTTTaGTTTTATCCTGGACAGTGTGGACCTCACCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: EGWLARVHVACL*FYPGQCGPHHG Trigger: CCCATGGTGAGGTCCACACTGTCCAGGATAAAAGCAAAGGCATGCCACGTGTACACGTGCAAGCCAGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR CCA 72 bp | TGCACGTGTACACGTGGCATGCCTTTGCTTTTATCCTaGACAGTGTGGACCTCACCATGGGCCCTGGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CTCTRGMPLLLS*TVWTSPWALAL Trigger: CAGAGCCAGGGCCCATGGTGAGGTCCACACTGTCCAGGATAAAAGCAAAGGCATGCCACGTGTACACGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CCA 72 bp | GTGCAGATGACACAGCTCAGGAAGAGTGATCACTCCTaGTCCTCCGTGGGCGGCACAGGGAACTCGAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: VQMTQLRKSDHS*SSVGGTGNSRL Trigger: TAATCTCGAGTTCCCTGTGCCGCCCACGGAGGACCAGGAGTGATCACTCTTCCTGAGCTGTGTCATCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR TCA 72 bp | GACAGACAGACAGACAGACAGACAGACAGGGCCTGGTaGGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: DRQTDRQTDRAW*ELLKPQSQAPP Trigger: TGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCTGTCTGTCTGTCTGTCTGTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | GCTCTAGAGGGCTGGCTTGCACGTGTACACGTGGCATaGCTTTGCTTTTATCCTGGACAGTGTGGACCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ALEGWLARVHVA*LCFYPGQCGPH Trigger: GTGAGGTCCACACTGTCCAGGATAAAAGCAAAGGCATGCCACGTGTACACGTGCAAGCCAGCCCTCTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR CCA 72 bp | GTGCATGCACAGGGAGGCCAGAGGTGCCAGATCACCTaGTACTATAGTTATGGGTGGTTGTGGGCTGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VHAQGGQRCQIT*YYSYGWLWAAQ Trigger: TTGAGCAGCCCACAACCACCCATAACTATAGTACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | GATTGCTTGCTTGCCCACTGTAGGTACAAAGATGGTTaGGACCACATCGGCGAGCACAGAGATGACGAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: DCLLAHCRYKDG*DHIGEHRDDER Trigger: TCGCTCGTCATCTCTGTGCTCGCCGATGTGGTCGCAACCATCTTTGTACCTACAGTGGGCAAGCAAGCAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR CCA 72 bp | GGTCACACCTGCTTGGTCCCAAATAGTTCTACTAGCTaGGGACCAAGTGTGCAAACAGGACCCTGCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GHTCLVPNSSTS*GPSVQTGPCRD Trigger: GTCTCTGCAGGGTCCTGTTTGCACACTTGGTCCCCAGCTAGTAGAACTATTTGGGACCAAGCAGGTGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR CAA 90 bp | GTGCATGCACAGGGAGGCCAGAGGTGCCAGATCACCTGGTACTATAGTTATGGGCCAAACTGCAGGATTTaGCTCCACTTCTGCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VHAQGGQRCQITWYYSYGPNCRI*LHFCSG Trigger: ACCTGAGCAGAAGTGGAGCAAAATCCTGCAGTTTGG...CCCATAACTATAGTACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | AATACACAGAAGGCTGAGGGCTCTAGAGGGCTGGCTTaGACGTGTACACGTGGCATGCCTTTGCTTTTATCC | + |
|
Preference number: 3 (lower is better) Translates to: NTQKAEGSRGLA*TCTRGMPLLLS Trigger: GGATAAAAGCAAAGGCATGCCACGTGTACACGTGCAAGCCAGCCCTCTAGAGCCCTCAGCCTTCTGTGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | GCAGGATTTTGCTCCACTTCTGCTCAGGTATCATGCTaGTTCCGTCCTTACCGTAGGCTGACTGAGAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AGFCSTSAQVSC*FRPYRRLTEKA Trigger: TGCTTTCTCAGTCAGCCTACGGTAAGGACGGAAGCAGCATGATACCTGAGCAGAAGTGGAGCAAAATCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | TGTGTGTGTTATGTGCATGCACAGGGAGGCCAGAGGTaGCAGATCACCTGGTACTATAGTTATGGGTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CVCYVHAQGGQR*QITWYYSYGWL Trigger: CAACCACCCATAACTATAGTACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCACATAACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR TCA 72 bp | GAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATaGTATCTACTCCAACAAGGTCACACCTGCTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ELLKPQSQAPPQ*YLLQQGHTCLV Trigger: GACCAAGCAGGTGTGACCTTGTTGGAGTAGATATCATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | ACTGCAGGATTTTGCTCCACTTCTGCTCAGGTATCATaGTGCTTCCGTCCTTACCGTAGGCTGACTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TAGFCSTSAQVS*CFRPYRRLTEK Trigger: TTTCTCAGTCAGCCTACGGTAAGGACGGAAGCAGCATGATACCTGAGCAGAAGTGGAGCAAAATCCTGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR CCA 72 bp | TGGGTGGTTGTGGGCTGCTCAACACAGGTACTAATGTaGAGACAAATCTGTCCAGCCCCTAAGAGCCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: WVVVGCSTQVLM*RQICPAPKSHF Trigger: AAAATGGCTCTTAGGGGCTGGACAGATTTGTCTCCACATTAGTACCTGTGTTGAGCAGCCCACAACCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR TCA 72 bp | AGGCTTTCTTTATTGAGCTTGCTTGTCTTAAGAGGGTaGGTCTGTGATCATCCTGGCAGGGGGAACAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: RLSLLSLLVLRG*VCDHPGRGNRQ Trigger: CTGTCTGTTCCCCCTGCCAGGATGATCACAGACTCACCCTCTTAAGACAAGCAAGCTCAATAAAGAAAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR-3UTR CAA 90 bp | CATCCTTGGCCTTACCTCAGTGACCTTTGGATAGGTCAGGTTCCAAACCTTAGAAGGTGTCTTGAGGCTTaGGGAGGAGATAAGGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HPWPYLSDLWIGQVPNLRRCLEA*GGDKVL Trigger: TAAAACCTTATCTCCTCCCAAAGCCTCAAGACACCT...TCTAAGGTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTAAGGCCAAGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | GCATATTACAGCAGAGAAAAGGTGGCTTCTGGGATCTaGTTCTTTTCATTGCCTCTGTCAGGTAAGACGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AYYSREKVASGI*FFSLPLSGKTL Trigger: GAGCGTCTTACCTGACAGAGGCAATGAAAAGAAGCAGATCCCAGAAGCCACCTTTTCTCTGCTGTAATATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | ATATCTATGGTGAAATGTCAGGGGCTAGCCAAAGGCTaGCCTCTGAGAACACCTAGCATATTACAGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ISMVKCQGLAKG*PLRTPSILQQR Trigger: TCTCTGCTGTAATATGCTAGGTGTTCTCAGAGGGCAGCCTTTGGCTAGCCCCTGACATTTCACCATAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR GCA 72 bp | TCTGTCCAGCCCCTAAGAGCCATTTTTAATAGTCAGTaGTCTGTGCTTTCTCTTAGCTGGAAGGAGTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SVQPLRAIFNSQ*SVLSLSWKELV Trigger: CACCAACTCCTTCCAGCTAAGAGAAAGCACAGAGCACTGACTATTAAAAATGGCTCTTAGGGGCTGGACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| 3UTR CCA 72 bp | ATTTTTAATAGTCAGTGCTCTGTGCTTTCTCTTAGCTaGAAGGAGTTGGTGTTTGCTTTACCACAGAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: IFNSQCSVLSLS*KELVFALPQRT Trigger: TGTTCTCTGTGGTAAAGCAAACACCAACTCCTTCCAGCTAAGAGAAAGCACAGAGCACTGACTATTAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR GCA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGGACCAGCTGAGCCGCTaGAGGTGGATGCAGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRGRAHLCACQATRLRSQDQLSR*RWMQRH Trigger: GTGCCTCTGCATCCACCTGCAGCGGCTCAGCTGGTC...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CCA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGTGTGTGGCCCCTGCTaGTCCCTGGAGTACTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVVCGPC*SLEYWV Trigger: CACCCAGTACTCCAGGGACCAGCAGGGGCCACACAC...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | CAGCACGGACACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTCTGAGCCGCTGCAGGTaGATGCAGAGGCACTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QHGHPRPGSPVRLPGYEVLSRCR*MQRHCG Trigger: GCCACAGTGCCTCTGCATCCACCTGCAGCGGCTCAG...AACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGTGTCCGTGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CAA 72 bp | GGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTaGCGAAGCCAGCACTGCTGCAGGCTGCAAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRAHLCACQATR*RSQHCCRLQES Trigger: ACTCTCTTGCAGCCTGCAGCAGTGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | CCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCATGCGTCCTGTACTTCTaGGGCAGACCCTGGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRPGSPVRLPGYEVAKPACVLYF*GRPWVL Trigger: GAGAACCCAGGGTCTGCCCCAGAAGTACAGGACGCA...TGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR TCA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGTCTGGGAGCCATTTCTaGCTGCTGCTCCAGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: TRGRAHLCACQATRLRSQSGSHF*LLLQGM Trigger: CATTCCCTGGAGCAGCAGTCAGAAATGGCTCCCAGA...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | CGGCACAAAGACTCTCGAGGGAAGAGGCCCCGGAGGACAGTGGAGGTGGTCAGGCTTTGGGGCCGCCTGTaGGTCCTGTACTTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RHKDSRGKRPRRTVEVVRLWGRL*VLYFWG Trigger: GCCCCAGAAGTACAGGACGCACAGGCGGCCCCAAAG...CCTGACCACCTCCACTGTCCTCCGGGGCCTCTTCCCTCGAGAGTCTTTGTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGTGCACATCAAACAAGTaGGTGACTCGAGGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TRGRAHLCACQATRLRSQCTSNK*VTRGWR Trigger: CCGCCAGCCTCGAGTCACCCACTTGTTTGATGTGCA...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | CGGCACAAAGACTCTCGAGGGAAGAGGCCCCGGAGGACAGTGGAGGTGGTCAGGGTGGTCCAGTGTCAGTaGGTGCCCCCAAGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHKDSRGKRPRRTVEVVRVVQCQ*VPPSGS Trigger: GCTGCCACTTGGGGGCACCCACTGACACTGGACCAC...CCTGACCACCTCCACTGTCCTCCGGGGCCTCTTCCCTCGAGAGTCTTTGTGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR TCA 90 bp | GAACTGGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACCATCAAACAAGTGGGTaGCTCGAGGCTGGCGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELAPGSPIASVSFGACRDHQTSG*LEAGGL Trigger: GAGACCGCCAGCCTCGAGTCACCCACTTGTTTGATG...GTCTCTGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | CGGCACAAAGACTCTCGAGGGAAGAGGCCCCGGAGGACAGTGGAGGTGGTCAGGCAGGCAGACAGGCCCTaGAGCAGCGAGTTCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHKDSRGKRPRRTVEVVRQADRP*SSEFMK Trigger: CTTCATGAACTCGCTGCTGCAGGGCCTGTCTGCCTG...CCTGACCACCTCCACTGTCCTCCGGGGCCTCTTCCCTCGAGAGTCTTTGTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | CCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGCATCCACAGCCATTGGTTaGTGGTTGAGAGAGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRPGSPVRLPGYEVAKPASTAIG*WLREGS Trigger: AGAACCCTCTCTCAACCAGCAACCAATGGCTGTGGA...TGCTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | ATCATCCTGGCAGGGGGAACAGACAGGCATGGCACTGGCACCATAGCAGGCAAGGTGGCTTTGGGGCCATaGTGGCTGGGCTTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IILAGGTDRHGTGTIAGKVALGP*WLGLCP Trigger: GGGACACAAGCCCAGCCAGCATGGCCCCAAAGCCAC...CTTGCCTGCTATGGTGCCAGTGCCATGCCTGTCTGTTCCCCCTGCCAGGATGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGATGGTGAACGACAACTaGCATCAAGCGGAAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRGRAHLCACQATRLRSQMVNDN*HQAEEV Trigger: TACCTCTTCCGCTTGATGGCAGTTGTCGTTCACCAT...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR TCA 90 bp | GAACTGGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACGTGACCGTCTGTAGGTaGCAAAGTGTCCAGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELAPGSPIASVSFGACRDVTVCR*QSVQSA Trigger: TGCACTCTGGACACTTTGTCACCTACAGACGGTCAC...GTCTCTGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGGAGGACAGGACCTCCTaGAGGCTGGCCTTGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: RQGLVRALETSKPSPTTMEDRTS*RLALRT Trigger: CGTCCGCAAGGCCAGCCTGCAGGAGGTCCTGTCCTC...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGTGGGGCCATGCTGGCTaGGCTTGTGTCCCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQGLVRALETSKPSPTTMWGHAG*ACVPGG Trigger: GCCTCCTGGGACACAAGCCCAGCCAGCATGGCCCCA...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CCA 90 bp | GTCTGTGGGGCTGCTGTGTCGTGGAGTCCAGCACAGCATAGTCTCAGAGTCTCAGGTTCTCGGTGGCTTTaGGGCCATGCTGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCGAAVSWSPAQHSLRVSGSRWL*GHAGWA Trigger: AGCCCAGCCAGCATGGCCCCAAAGCCACCGAGAACC...TGAGACTCTGAGACTATGCTGTGCTGGACTCCACGACACAGCAGCCCCACAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGCGGGGAAGGCAGGGCTaGCAACAGAGACGGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGLVRALETSKPSPTTMRGRQG*QQRRGA Trigger: TGCTCCCCGTCTCTGTTGCCAGCCCTGCCTTCCCCG...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | CGGCACAAAGACTCTCGAGGGAAGAGGCCCCGGAGGACAGTGGAGGTGGTCAGGTTGAGAGAGGGTTCTTaGCAGAAGGTGGTGACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHKDSRGKRPRRTVEVVRLREGS*QKVVTV Trigger: GACGGTCACCACCTTCTGCCAAGAACCCTCTCTCAA...CCTGACCACCTCCACTGTCCTCCGGGGCCTCTTCCCTCGAGAGTCTTTGTGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGGGACCTCCTGCAGGCTaGCCTTGCGGACGGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RQGLVRALETSKPSPTTMGPPAG*PCGRCR Trigger: ACGACACCGTCCGCAAGGCCAGCCTGCAGGAGGTCC...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR TCA 90 bp | GGAGTCCAGCACAGCATAGTCTCAGAGTCTCAAGTCCTCAGTATGCACAGTGAGCGTGGCTGGACCAGCTaGGCCGCTGCAGGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GVQHSIVSESQVLSMHSERGWTS*AAAGGC Trigger: GCATCCACCTGCAGCGGCTCAGCTGGTCCAGCCACG...CTCACTGTGCATACTGAGGACTTGAGACTCTGAGACTATGCTGTGCTGGACTCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | ATCATCCTGGCAGGGGGAACAGACAGGCATGGCACTGGCACCATAGCAGGCAAGAACATAGATCCCTGCTaGCAGGGCAGCGGCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: IILAGGTDRHGTGTIAGKNIDPC*QGSGNP Trigger: GGGATTGCCGCTGCCCTGGCAGCAGGGATCTATGTT...CTTGCCTGCTATGGTGCCAGTGCCATGCCTGTCTGTTCCCCCTGCCAGGATGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGGCCGCTGCAGGTGGATaGAGAGGCACTGTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQGLVRALETSKPSPTTMAAAGG*RGTVAA Trigger: AGCTGCCACAGTGCCTCTGCATCCACCTGCAGCGGC...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | AATACACAGAAGGCTGAGGGCTCTAGAGGGCTGGCTTGCACGTGTACACGTGGCTCCAGTGATTGGTCGTaGGGTGAGGGGACCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NTQKAEGSRGLACTCTRGSSDWS*GEGTLS Trigger: CGAGAGGGTCCCCTCACCCCACGACCAATCACTGGA...GCCACGTGTACACGTGCAAGCCAGCCCTCTAGAGCCCTCAGCCTTCTGTGTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | GAACTGGCTCCGGGGAGCCCCATCGCGTCTGTCTCCTTTGGCGCTTGCAGAGACGAAATCCACAGCCATTaGTTGCTGGTTGAGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELAPGSPIASVSFGACRDEIHSH*LLVERG Trigger: CCCTCTCTCAACCAGCAACCAATGGCTGTGGATTTC...GTCTCTGCAAGCGCCAAAGGAGACAGACGCGATGGGGCTCCCCGGAGCCAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR TCA 90 bp | ATCATCCTGGCAGGGGGAACAGACAGGCATGGCACTGGCACCATAGCAGGCAAGAGGTATTCCCCAGATTaGCAAGGCCAGGCACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IILAGGTDRHGTGTIAGKRYSPD*QGQAQA Trigger: GGCTTGTGCCTGGCCTTGTCAATCTGGGGAATACCT...CTTGCCTGCTATGGTGCCAGTGCCATGCCTGTCTGTTCCCCCTGCCAGGATGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | CATCCTTGGCCTTACCTCAGTGACCTTTGGATAGGTCAGGTTCCAAACCTTAGAGTGCGCAGGAAGCGCTaGAGGGCCTTGTCGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPWPYLSDLWIGQVPNLRVRRKR*RALSAA Trigger: GGCGGCCGACAAGGCCCTGCAGCGCTTCCTGCGCAC...TCTAAGGTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTAAGGCCAAGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | TATGTGTGTGTTATGTGCATGCACAGGGAGGCCAGAGGTGCCAGATCACCTGGTAACTGCACGTGCTCGTaGCGCTTCAAGGGCGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YVCVMCMHREARGARSPGNCTCS*RFKGVP Trigger: CGGCACGCCCTTGAAGCGGCACGAGCACGTGCAGTT...ACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCACATAACACACACATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR TCA 90 bp | GATTGCTTGCTTGCCCACTGTAGGTACAAAGATGGTTGCGACCACATCGGCGAGAGACCTCGTCCTCGGTaGCTTCTTGGCAGGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DCLLAHCRYKDGCDHIGERPRPR*LLGRTE Trigger: CTCTGTCCTGCCAAGAAGTCACCGAGGACGAGGTCT...CTCGCCGATGTGGTCGCAACCATCTTTGTACCTACAGTGGGCAAGCAAGCAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | CATCCTTGGCCTTACCTCAGTGACCTTTGGATAGGTCAGGTTCCAAACCTTAGATTCAAGGGCGTGCCGTaGCTGGACCAGCTGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HPWPYLSDLWIGQVPNLRFKGVP*LDQLSR Trigger: GCGGCTCAGCTGGTCCAGCCACGGCACGCCCTTGAA...TCTAAGGTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTAAGGCCAAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CAA 72 bp | AGAGGGCTGGCTTGCACGTGTACACGTGGCATGCCTTaGCTTTTATCCTGGACAGTGTGGACCTCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLACTCTRGMP*LLSWTVWTSPW Trigger: CCATGGTGAGGTCCACACTGTCCAGGATAAAAGCAAAGGCATGCCACGTGTACACGTGCAAGCCAGCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR TCA 90 bp | GTGCATGCACAGGGAGGCCAGAGGTGCCAGATCACCTGGTACTATAGTTATGGGCGGACTCTGATGAGATaGAGTGGTGAAGGCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VHAQGGQRCQITWYYSYGRTLMR*SGEGSG Trigger: ACCACTGCCTTCACCACTTCATCTCATCAGAGTCCG...CCCATAACTATAGTACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR TCA 90 bp | GTCTGTGGGGCTGCTGTGTCGTGGAGTCCAGCACAGCATAGTCTCAGAGTCTCATGCATGTCTCCATGGTaGACGACAACTGCCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCGAAVSWSPAQHSLRVSCMSPW*TTTAIK Trigger: CTTGATGGCAGTTGTCGTTCACCATGGAGACATGCA...TGAGACTCTGAGACTATGCTGTGCTGGACTCCACGACACAGCAGCCCCACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR GCA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGGGAGCCATTTCTGACTaGTGCTCCAGGGAATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RQGLVRALETSKPSPTTMGAISD*CSRECT Trigger: TGTGCATTCCCTGGAGCAGCAGTCAGAAATGGCTCC...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | TGTGGGGCTGCTGTGTCGTGGAGTCCAGCACAGCATAGTCTCAGAGTCTCAAGTTGGTCCCTGGAGTACTaGGTGGTAAACTCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGAAVSWSPAQHSLRVSSWSLEY*VVNSSS Trigger: GCTGGAAGAGTTTACCACCCAGTACTCCAGGGACCA...ACTTGAGACTCTGAGACTATGCTGTGCTGGACTCCACGACACAGCAGCCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | CATCCTTGGCCTTACCTCAGTGACCTTTGGATAGGTCAGGTTCCAAACCTTAGAGCACTGGTGAGTGTGTaGCCCCTGCTGGTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPWPYLSDLWIGQVPNLRALVSV*PLLVPG Trigger: TCCAGGGACCAGCAGGGGCCACACACTCACCAGTGC...TCTAAGGTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTAAGGCCAAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| 3UTR CAA 72 bp | AAAGGCGTCCCCAGAGGTGGGAGGTGTCTTGAGGCTTaGGGAGGAGATAAGGTTTTAATGATGGAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGVPRGGRCLEA*GGDKVLMMEPR Trigger: CCTGGGCTCCATCATTAAAACCTTATCTCCTCCCAAAGCCTCAAGACACCTCCCACCTCTGGGGACGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR TCA 90 bp | TGTGGGGCTGCTGTGTCGTGGAGTCCAGCACAGCATAGTCTCAGAGTCTCAAGTTGGCAGCTGGAATACTaGGAGAAAGGCTGTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGAAVSWSPAQHSLRVSSWQLEY*EKGCQR Trigger: CCTTTGACAGCCTTTCTCTCAGTATTCCAGCTGCCA...ACTTGAGACTCTGAGACTATGCTGTGCTGGACTCCACGACACAGCAGCCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR TCA 90 bp | GTACACGTGGCATGCCTTTGCTTTTATCCTGGACAGTGTGGACCTCACCATGGGCTTGGCAGAAGGTGGTaGCCGTCTGTAGGTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHVACLCFYPGQCGPHHGLGRRW*PSVGDK Trigger: TTTGTCACCTACAGACGGTCACCACCTTCTGCCAAG...CCCATGGTGAGGTCCACACTGTCCAGGATAAAAGCAAAGGCATGCCACGTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | TATGTGTGTGTTATGTGCATGCACAGGGAGGCCAGAGGTGCCAGATCACCTGGTTCCTCGGTGACTTCTTaGCAGGACAGAGCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YVCVMCMHREARGARSPGSSVTS*QDRAFR Trigger: CCTGAAAGCTCTGTCCTGCCAAGAAGTCACCGAGGA...ACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCACATAACACACACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS-3UTR CCA 90 bp | CATCCTTGGCCTTACCTCAGTGACCTTTGGATAGGTCAGGTTCCAAACCTTAGAGAGACTTCCAGTGATTaGTCGTGGGGTGAGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HPWPYLSDLWIGQVPNLRETSSD*SWGEGT Trigger: GGTCCCCTCACCCCACGACCAATCACTGGAAGTCTC...TCTAAGGTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTAAGGCCAAGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CCA 90 bp | GATTGCTTGCTTGCCCACTGTAGGTACAAAGATGGTTGCGACCACATCGGCGAGAGCGGAAGAGGTATGTaGAGGAGCTGTAGTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DCLLAHCRYKDGCDHIGESGRGM*RSCSQE Trigger: TTCCTGACTACAGCTCCTCCACATACCTCTTCCGCT...CTCGCCGATGTGGTCGCAACCATCTTTGTACCTACAGTGGGCAAGCAAGCAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR GCA 90 bp | TATGTGTGTGTTATGTGCATGCACAGGGAGGCCAGAGGTGCCAGATCACCTGGTTCAAAGGACGAGATCTaGCATCTGTACATTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YVCVMCMHREARGARSPGSKDEI*HLYILR Trigger: CCTGAGAATGTACAGATGGCAGATCTCGTCCTTTGA...ACCAGGTGATCTGGCACCTCTGGCCTCCCTGTGCATGCACATAACACACACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR GCA 90 bp | CATCCTTGGCCTTACCTCAGTGACCTTTGGATAGGTCAGGTTCCAAACCTTAGAGCCATTTCTGACTGCTaGTCCAGGGAATGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: HPWPYLSDLWIGQVPNLRAISDC*SRECTS Trigger: TGATGTGCATTCCCTGGAGCAGCAGTCAGAAATGGC...TCTAAGGTTTGGAACCTGACCTATCCAAAGGTCACTGAGGTAAGGCCAAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CCA 90 bp | TTACCTAATGTAATAATTTACAAAATGAGGAAGGACATTAGCGCTCGGTCAGGGCCCCCAAGTGGCAGCTaGAATACTGAGAGAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPNVIIYKMRKDISARSGPPSGS*NTERKA Trigger: AGCCTTTCTCTCAGTATTCCAGCTGCCACTTGGGGG...CCCTGACCGAGCGCTAATGTCCTTCCTCATTTTGTAAATTATTACATTAGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CCA 90 bp | TTACCTAATGTAATAATTTACAAAATGAGGAAGGACATTAGCGCTCGGTCAGGGACAGCCATTGGTTGCTaGTTGAGAGAGGGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPNVIIYKMRKDISARSGTAIGC*LREGSW Trigger: CCAAGAACCCTCTCTCAACCAGCAACCAATGGCTGT...CCCTGACCGAGCGCTAATGTCCTTCCTCATTTTGTAAATTATTACATTAGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS CCA 90 bp | CTGACTCAGACCTGGCTTTGGGGCCGCCTGTGCGTCCTGTACTTCTaGGGCAGACCCTGGGTTCTCGGTGGCTTTGGGGCCATGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTQTWLWGRLCVLYF*GRPWVLGGFGAMLA Trigger: AGCCAGCATGGCCCCAAAGCCACCGAGAACCCAGGGTCTGCCCCAGAAGTACAGGACGCACAGGCGGCCCCAAAGCCAGGTCTGAGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CCA 90 bp | GTGCGTCCTGTACTTCTGGGGCAGACCCTGGGTTCTCGGTGGCTTTaGGGCCATGCTGGCTGGGCTTGTGTCCCAGGAGGCGGTACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VRPVLLGQTLGSRWL*GHAGWACVPGGGTC Trigger: ACAAGTACCGCCTCCTGGGACACAAGCCCAGCCAGCATGGCCCCAAAGCCACCGAGAACCCAGGGTCTGCCCCAGAAGTACAGGACGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS-3UTR CAA 90 bp | ATCATCCTGGCAGGGGGAACAGACAGGCATGGCACTGGCACCATAGCAGGCAAGGGGTTCTCGGTGGCTTaGGGGCCATGCTGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IILAGGTDRHGTGTIAGKGFSVA*GPCWLG Trigger: GCCCAGCCAGCATGGCCCCAAAGCCACCGAGAACCC...CTTGCCTGCTATGGTGCCAGTGCCATGCCTGTCTGTTCCCCCTGCCAGGATGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS GCA 90 bp | TCGTGCCGCTTCAAGGGCGTGCCGTGGCTGGACCAGCTGAGCCGCTaGAGGTGGATGCAGAGGCACTGTGGCAGCTTTCCGAGTTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCRFKGVPWLDQLSR*RWMQRHCGSFPSFN Trigger: GTTAAAACTCGGAAAGCTGCCACAGTGCCTCTGCATCCACCTGCAGCGGCTCAGCTGGTCCAGCCACGGCACGCCCTTGAAGCGGCACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CCA 90 bp | AACTCGTTAAACTGCACGTGCTCGTGCCGCTTCAAGGGCGTGCCGTaGCTGGACCAGCTGAGCCGCTGCAGGTGGATGCAGAGGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSLNCTCSCRFKGVP*LDQLSRCRWMQRHC Trigger: ACAGTGCCTCTGCATCCACCTGCAGCGGCTCAGCTGGTCCAGCCACGGCACGCCCTTGAAGCGGCACGAGCACGTGCAGTTTAACGAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CCA 90 bp | CTGGGGCAGACCCTGGGTTCTCGGTGGCTTTGGGGCCATGCTGGCTaGGCTTGTGTCCCAGGAGGCGGTACTTGTAGAAGTCCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LGQTLGSRWLWGHAG*ACVPGGGTCRSPSS Trigger: TGATGATGGACTTCTACAAGTACCGCCTCCTGGGACACAAGCCCAGCCAGCATGGCCCCAAAGCCACCGAGAACCCAGGGTCTGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS-3UTR CAA 90 bp | ACCCGAGGCCGGGCTCACCTGTGCGCCTGCCAGGCTACGAGGTTGCGAAGCCAGTCAATCTTTGTACAGTaGTCACACACAACGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TRGRAHLCACQATRLRSQSIFVQ*SHTTSR Trigger: GCGAGACGTTGTGTGTGACAACTGTACAAAGATTGA...CTGGCTTCGCAACCTCGTAGCCTGGCAGGCGCACAGGTGAGCCCGGCCTCGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CAA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGTCCTGCAGGCTGGCCTaGCGGACGGTGTCGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RQGLVRALETSKPSPTTMSCRLA*RTVSSE Trigger: TTCTGACGACACCGTCCGCAAGGCCAGCCTGCAGGA...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS GCA 90 bp | GGCTGGCCTTGCGGACGGTGTCGTCAGAAATCCACAGCCATTGGTTaGTGGTTGAGAGAGGGTTCTTGGCAGAAGGTGGTGACCGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GWPCGRCRQKSTAIG*WLREGSWQKVVTVC Trigger: ACAGACGGTCACCACCTTCTGCCAAGAACCCTCTCTCAACCAGCAACCAATGGCTGTGGATTTCTGACGACACCGTCCGCAAGGCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS CCA 90 bp | TGCAGGCTGGCCTTGCGGACGGTGTCGTCAGAAATCCACAGCCATTaGTTGCTGGTTGAGAGAGGGTTCTTGGCAGAAGGTGGTGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: CRLALRTVSSEIHSH*LLVERGFLAEGGDR Trigger: ACGGTCACCACCTTCTGCCAAGAACCCTCTCTCAACCAGCAACCAATGGCTGTGGATTTCTGACGACACCGTCCGCAAGGCCAGCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS TCA 90 bp | TCAGGACGTCCAGCAGACAGCTGGCGTCCAAGACCTCGTCCTCGGTaGCTTCTTGGCAGGACAGAGCTTTCAGGAGGTTCAGCAGTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SGRPADSWRPRPRPR*LLGRTELSGGSAVL Trigger: TAACACTGCTGAACCTCCTGAAAGCTCTGTCCTGCCAAGAAGTCACCGAGGACGAGGTCTTGGACGCCAGCTGTCTGCTGGACGTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 ENSMUST00000202603.4 |
||
| CDS CCA 90 bp | GGAGCCATTTCTGACTGCTGCTCCAGGGAATGCACATCAAACAAGTaGGTGACTCGAGGCTGGCGGTCTCTCTCGTCCTCCAGTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAISDCCSRECTSNK*VTRGWRSLSSSSDE Trigger: CTCATCACTGGAGGACGAGAGAGACCGCCAGCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGCAGTCAGAAATGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS CCA 90 bp | TGGCCTTGCGGACGGTGTCGTCAGAAATCCACAGCCATTGGTTGCTaGTTGAGAGAGGGTTCTTGGCAGAAGGTGGTGACCGTCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: WPCGRCRQKSTAIGC*LREGSWQKVVTVCR Trigger: CCTACAGACGGTCACCACCTTCTGCCAAGAACCCTCTCTCAACCAGCAACCAATGGCTGTGGATTTCTGACGACACCGTCCGCAAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS CCA 90 bp | CTGGGAGCCATTTCTGACTGCTCCAGGGAATGCACATCAAACAAGTaGGTGACTCGAGGCTGGCGGTCTCTCTCGTCCTCCAGTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGAISDCSRECTSNK*VTRGWRSLSSSSDE Trigger: CTCATCACTGGAGGACGAGAGAGACCGCCAGCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGTCAGAAATGGCTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200119.3 |
||
| CDS-3UTR CAA 90 bp | AATACACAGAAGGCTGAGGGCTCTAGAGGGCTGGCTTGCACGTGTACACGTGGCGTCCTCGGTGACTTCTaGGCAGGACAGAGCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NTQKAEGSRGLACTCTRGVLGDF*AGQSFQ Trigger: CTGAAAGCTCTGTCCTGCCAAGAAGTCACCGAGGAC...GCCACGTGTACACGTGCAAGCCAGCCCTCTAGAGCCCTCAGCCTTCTGTGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CAA 90 bp | AATACACAGAAGGCTGAGGGCTCTAGAGGGCTGGCTTGCACGTGTACACGTGGCGTTGAGAGAGGGTTCTaGGCAGAAGGTGGTGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: NTQKAEGSRGLACTCTRGVERGF*AEGGDR Trigger: ACGGTCACCACCTTCTGCCAAGAACCCTCTCTCAAC...GCCACGTGTACACGTGCAAGCCAGCCCTCTAGAGCCCTCAGCCTTCTGTGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CAA 90 bp | ATCATCCTGGCAGGGGGAACAGACAGGCATGGCACTGGCACCATAGCAGGCAAGATCCACAGCCATTGGTaGCTGGTTGAGAGAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IILAGGTDRHGTGTIAGKIHSHW*LVERGF Trigger: GAACCCTCTCTCAACCAGCAACCAATGGCTGTGGAT...CTTGCCTGCTATGGTGCCAGTGCCATGCCTGTCTGTTCCCCCTGCCAGGATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS TCA 90 bp | AGGGGACCCTCTCGTGTGGCAAGTGACTTGTCTGGGAGCCATTTCTaGCTGCTGCTCCAGGGAATGCACATCAAACAAGTGGGTGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: RGPSRVASDLSGSHF*LLLQGMHIKQVGDS Trigger: CGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACACGAGAGGGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS TCA 90 bp | AGGGGACCCTCTCGTGTGGCAAGTGACTTGTCTGGGAGCCATTTCTaGCTGCTCCAGGGAATGCACATCAAACAAGTGGGTGACTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGPSRVASDLSGSHF*LLQGMHIKQVGDSR Trigger: CCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACACGAGAGGGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200119.3 |
||
| CDS GCA 90 bp | GACCCTCTCGTGTGGCAAGTGACTTGTCTGGGAGCCATTTCTGACTaGTGCTCCAGGGAATGCACATCAAACAAGTGGGTGACTCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DPLVWQVTCLGAISD*CSRECTSNKWVTRG Trigger: GCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACACGAGAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS GCA 90 bp | GACCCTCTCGTGTGGCAAGTGACTTGTCTGGGAGCCATTTCTGACTaGTCCAGGGAATGCACATCAAACAAGTGGGTGACTCGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DPLVWQVTCLGAISD*SRECTSNKWVTRGW Trigger: CCAGCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACACGAGAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200119.3 |
||
| CDS-3UTR CAA 90 bp | GTACACGTGGCATGCCTTTGCTTTTATCCTGGACAGTGTGGACCTCACCATGGGGCCATTGGTTGCTGGTaGAGAGAGGGTTCTTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VHVACLCFYPGQCGPHHGAIGCW*REGSWQ Trigger: CTGCCAAGAACCCTCTCTCAACCAGCAACCAATGGC...CCCATGGTGAGGTCCACACTGTCCAGGATAAAAGCAAAGGCATGCCACGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS GCA 90 bp | GGTGACAAAGTGTCCAGAGTGCATGTCTCCATGGTGAACGACAACTaGCATCAAGCGGAAGAGGTATGTGGAGGAGCTGTAGTCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GDKVSRVHVSMVNDN*HQAEEVCGGAVVRN Trigger: GTTCCTGACTACAGCTCCTCCACATACCTCTTCCGCTTGATGGCAGTTGTCGTTCACCATGGAGACATGCACTCTGGACACTTTGTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CAA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGTGGTGTTCACAGTGTTaGCACACCATGTTACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQGLVRALETSKPSPTTMWCSQC*HTMLLV Trigger: CACCAGTAACATGGTGTGCAAACACTGTGAACACCA...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CAA 90 bp | AGACAGGGCCTGGTGAGAGCTCTTGAAACCTCAAAGCCAAGCCCCACCACAATGCCCTCGCTTCAATCTTaGTACAGTTGTCACACACAA | + |
|
Preference number: 5 (lower is better) Translates to: RQGLVRALETSKPSPTTMPSLQS*YSCHTQ Trigger: TTGTGTGTGACAACTGTACAAAGATTGAAGCGAGGG...CATTGTGGTGGGGCTTGGCTTTGAGGTTTCAAGAGCTCTCACCAGGCCCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS-3UTR CAA 90 bp | TTACCTAATGTAATAATTTACAAAATGAGGAAGGACATTAGCGCTCGGTCAGGGGACTCAGACCTGGCTTaGGGGCCGCCTGTGCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPNVIIYKMRKDISARSGDSDLA*GPPVRP Trigger: AGGACGCACAGGCGGCCCCAAAGCCAGGTCTGAGTC...CCCTGACCGAGCGCTAATGTCCTTCCTCATTTTGTAAATTATTACATTAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS GCA 72 bp | TTGTATCTGACGGCCGCCCCGGTGCGCAGGAAGCGCTaGAGGGCCTTGTCGGCCGCCGTCCTCGCCGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LYLTAAPVRRKR*RALSAAVLAAC Trigger: GCAGGCGGCGAGGACGGCGGCCGACAAGGCCCTGCAGCGCTTCCTGCGCACCGGGGCGGCCGTCAGATACAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CCA 72 bp | GGCCGCCTGTGCGTCCTGTACTTCTGGGGCAGACCCTaGGTTCTCGGTGGCTTTGGGGCCATGCTGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRLCVLYFWGRP*VLGGFGAMLAG Trigger: CCCAGCCAGCATGGCCCCAAAGCCACCGAGAACCCAGGGTCTGCCCCAGAAGTACAGGACGCACAGGCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CCA 72 bp | AACTGCACGTGCTCGTGCCGCTTCAAGGGCGTGCCGTaGCTGGACCAGCTGAGCCGCTGCAGGTGGATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NCTCSCRFKGVP*LDQLSRCRWMQ Trigger: CTGCATCCACCTGCAGCGGCTCAGCTGGTCCAGCCACGGCACGCCCTTGAAGCGGCACGAGCACGTGCAGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CCA 72 bp | ACCTGGCTTTGGGGCCGCCTGTGCGTCCTGTACTTCTaGGGCAGACCCTGGGTTCTCGGTGGCTTTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TWLWGRLCVLYF*GRPWVLGGFGA Trigger: GGCCCCAAAGCCACCGAGAACCCAGGGTCTGCCCCAGAAGTACAGGACGCACAGGCGGCCCCAAAGCCAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CCA 72 bp | GTACTTCTGGGGCAGACCCTGGGTTCTCGGTGGCTTTaGGGCCATGCTGGCTGGGCTTGTGTCCCAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLLGQTLGSRWL*GHAGWACVPGG Trigger: GCCTCCTGGGACACAAGCCCAGCCAGCATGGCCCCAAAGCCACCGAGAACCCAGGGTCTGCCCCAGAAGTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CAA 72 bp | TGTACTTCTGGGGCAGACCCTGGGTTCTCGGTGGCTTaGGGGCCATGCTGGCTGGGCTTGTGTCCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CTSGADPGFSVA*GPCWLGLCPRR Trigger: CCTCCTGGGACACAAGCCCAGCCAGCATGGCCCCAAAGCCACCGAGAACCCAGGGTCTGCCCCAGAAGTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CAA 90 bp | TGTGCGTCCTGTACTTCTGGGGCAGACCCTGGGTTCTCGGTGGCTTaGGGGCCATGCTGGCTGGGCTTGTGTCCCAGGAGGCGGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: CASCTSGADPGFSVA*GPCWLGLCPRRRYL Trigger: CAAGTACCGCCTCCTGGGACACAAGCCCAGCCAGCATGGCCCCAAAGCCACCGAGAACCCAGGGTCTGCCCCAGAAGTACAGGACGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CAA 90 bp | CCCTGCTGGTCCCTGGAGTACTGGGTGGTAAACTCTTCCAGCCACTaGACAAACGCAGGGCAGGCAGACAGGCCCTGCAGCAGCGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PCWSLEYWVVNSSSH*TNAGQADRPCSSEF Trigger: GAACTCGCTGCTGCAGGGCCTGTCTGCCTGCCCTGCGTTTGTCAAGTGGCTGGAAGAGTTTACCACCCAGTACTCCAGGGACCAGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 ENSMUST00000202603.4 |
||
| CDS TCA 72 bp | TGGTCGTGGGGTGAGGGGACCCTCTCGTGTGGCAAGTaGCTTGTCTGGGAGCCATTTCTGACTGCTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WSWGEGTLSCGK*LVWEPFLTAPG Trigger: CCCTGGAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACACGAGAGGGTCCCCTCACCCCACGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200119.3 |
||
| CDS TCA 72 bp | TGGTCGTGGGGTGAGGGGACCCTCTCGTGTGGCAAGTaGCTTGTCTGGGAGCCATTTCTGACTGCTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WSWGEGTLSCGK*LVWEPFLTAAP Trigger: TGGAGCAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACACGAGAGGGTCCCCTCACCCCACGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS GCA 72 bp | TCCATCATCAGGAACTCGTTAAACTGCACGTGCTCGTaGCGCTTCAAGGGCGTGCCGTGGCTGGACCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SIIRNSLNCTCS*RFKGVPWLDQL Trigger: CAGCTGGTCCAGCCACGGCACGCCCTTGAAGCGGCACGAGCACGTGCAGTTTAACGAGTTCCTGATGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CAA 72 bp | TCCCTGGAGTACTGGGTGGTAAACTCTTCCAGCCACTaGACAAACGCAGGGCAGGCAGACAGGCCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLEYWVVNSSSH*TNAGQADRPCS Trigger: GCTGCAGGGCCTGTCTGCCTGCCCTGCGTTTGTCAAGTGGCTGGAAGAGTTTACCACCCAGTACTCCAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 ENSMUST00000202603.4 |
||
| CDS CAA 90 bp | AGGCTGGCCTTGCGGACGGTGTCGTCAGAAATCCACAGCCATTGGTaGCTGGTTGAGAGAGGGTTCTTGGCAGAAGGTGGTGACCGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLALRTVSSEIHSHW*LVERGFLAEGGDRL Trigger: CAGACGGTCACCACCTTCTGCCAAGAACCCTCTCTCAACCAGCAACCAATGGCTGTGGATTTCTGACGACACCGTCCGCAAGGCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS TCA 72 bp | CCAGCAGACAGCTGGCGTCCAAGACCTCGTCCTCGGTaGCTTCTTGGCAGGACAGAGCTTTCAGGAGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PADSWRPRPRPR*LLGRTELSGGS Trigger: TGAACCTCCTGAAAGCTCTGTCCTGCCAAGAAGTCACCGAGGACGAGGTCTTGGACGCCAGCTGTCTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 ENSMUST00000202603.4 |
||
| CDS TCA 72 bp | ACTGCTGCTCCAGGGAATGCACATCAAACAAGTGGGTaGCTCGAGGCTGGCGGTCTCTCTCGTCCTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TAAPGNAHQTSG*LEAGGLSRPPV Trigger: CACTGGAGGACGAGAGAGACCGCCAGCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS TCA 72 bp | CAGCGGCAATCCCACCGATCACTCCCCAGTTCTTCATaGCTTTGTATCTGCCTCGGGTGGGAAGGCCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: QRQSHRSLPSSS*LCICLGWEGPT Trigger: TGTGGGGCCTTCCCACCCGAGGCAGATACAAAGTCATGAAGAACTGGGGAGTGATCGGTGGGATTGCCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202603.4 |
||
| CDS TCA 72 bp | CTGACTGCTCCAGGGAATGCACATCAAACAAGTGGGTaGCTCGAGGCTGGCGGTCTCTCTCGTCCTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LTAPGNAHQTSG*LEAGGLSRPPV Trigger: CACTGGAGGACGAGAGAGACCGCCAGCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200119.3 |
||
| CDS CCA 72 bp | TCTGACTGCTGCTCCAGGGAATGCACATCAAACAAGTaGGTGACTCGAGGCTGGCGGTCTCTCTCGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SDCCSRECTSNK*VTRGWRSLSSS Trigger: GGAGGACGAGAGAGACCGCCAGCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGCAGTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS CCA 72 bp | GTCTTCCATGGAAAGGGTGCTGAGACTTCCAGTGATTaGTCGTGGGGTGAGGGGACCCTCTCGTGTGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VFHGKGAETSSD*SWGEGTLSCGK Trigger: CTTGCCACACGAGAGGGTCCCCTCACCCCACGACCAATCACTGGAAGTCTCAGCACCCTTTCCATGGAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
||
| CDS CCA 72 bp | CCTCAGACCTATACTCTCGCCCCTGCTGCTGCACCCTaGACAGAACTCGCTCATAGAACAGCAGGTAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PQTYTLAPAAAP*TELAHRTAGRH Trigger: GTGCCTACCTGCTGTTCTATGAGCGAGTTCTGTCCAGGGTGCAGCAGCAGGGGCGAGAGTATAGGTCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
||
| CDS GCA 72 bp | CTCTGTAATGGGACCCCAAATAACATAGATCCCTGCTaGCAGGGCAGCGGCAATCCCACCGATCACTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LCNGTPNNIDPC*QGSGNPTDHSP Trigger: TGGGGAGTGATCGGTGGGATTGCCGCTGCCCTGGCAGCAGGGATCTATGTTATTTGGGGTCCCATTACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 ENSMUST00000202603.4 |
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| CDS CAA 72 bp | ACAGCTGGCGTCCAAGACCTCGTCCTCGGTGACTTCTaGGCAGGACAGAGCTTTCAGGAGGTTCAGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: TAGVQDLVLGDF*AGQSFQEVQQC Trigger: ACACTGCTGAACCTCCTGAAAGCTCTGTCCTGCCAAGAAGTCACCGAGGACGAGGTCTTGGACGCCAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 ENSMUST00000202603.4 |
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| CDS CAA 72 bp | GCAATCCCACCGATCACTCCCCAGTTCTTCATGACTTaGTATCTGCCTCGGGTGGGAAGGCCCCACAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AIPPITPQFFMT*YLPRVGRPHSK Trigger: CTTGCTGTGGGGCCTTCCCACCCGAGGCAGATACAAAGTCATGAAGAACTGGGGAGTGATCGGTGGGATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202603.4 |
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| CDS GCA 72 bp | TGCGGACGGTGTCGTCAGAAATCCACAGCCATTGGTTaGTGGTTGAGAGAGGGTTCTTGGCAGAAGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: CGRCRQKSTAIG*WLREGSWQKVV Trigger: CACCACCTTCTGCCAAGAACCCTCTCTCAACCAGCAACCAATGGCTGTGGATTTCTGACGACACCGTCCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS GCA 72 bp | ACTTGTCTGGGAGCCATTTCTGACTGCTCCAGGGAATaGACATCAAACAAGTGGGTGACTCGAGGCTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TCLGAISDCSRE*TSNKWVTRGWR Trigger: CCGCCAGCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGTCAGAAATGGCTCCCAGACAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200119.3 |
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| CDS CCA 72 bp | AGGGAATGCACATCAAACAAGTGGGTGACTCGAGGCTaGCGGTCTCTCTCGTCCTCCAGTGATGAGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: RECTSNKWVTRG*RSLSSSSDEVM Trigger: CATCACCTCATCACTGGAGGACGAGAGAGACCGCCAGCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
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| CDS CCA 72 bp | GGACGGTGTCGTCAGAAATCCACAGCCATTGGTTGCTaGTTGAGAGAGGGTTCTTGGCAGAAGGTGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: GRCRQKSTAIGC*LREGSWQKVVT Trigger: GGTCACCACCTTCTGCCAAGAACCCTCTCTCAACCAGCAACCAATGGCTGTGGATTTCTGACGACACCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS CCA 72 bp | GCCTTGCGGACGGTGTCGTCAGAAATCCACAGCCATTaGTTGCTGGTTGAGAGAGGGTTCTTGGCAGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: ALRTVSSEIHSH*LLVERGFLAEG Trigger: ACCTTCTGCCAAGAACCCTCTCTCAACCAGCAACCAATGGCTGTGGATTTCTGACGACACCGTCCGCAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS CCA 72 bp | ATTTCTGACTGCTCCAGGGAATGCACATCAAACAAGTaGGTGACTCGAGGCTGGCGGTCTCTCTCGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ISDCSRECTSNK*VTRGWRSLSSS Trigger: GGAGGACGAGAGAGACCGCCAGCCTCGAGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGTCAGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200119.3 |
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| CDS CAA 72 bp | CCTTCTCCCCGGTCAGTGTCCCCCTCGCTTCAATCTTaGTACAGTTGTCACACACAACGTCTCGCACGGACT | + |
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Preference number: 6 (lower is better) Translates to: PSPRSVSPSLQS*YSCHTQRLART Trigger: AGTCCGTGCGAGACGTTGTGTGTGACAACTGTACAAAGATTGAAGCGAGGGGGACACTGACCGGGGAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
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| CDS CAA 90 bp | GATGCTCCACCTTCTCCCCGGTCAGTGTCCCCCTCGCTTCAATCTTaGTACAGTTGTCACACACAACGTCTCGCACGGACTCTGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: DAPPSPRSVSPSLQS*YSCHTQRLARTLMR Trigger: TCTCATCAGAGTCCGTGCGAGACGTTGTGTGTGACAACTGTACAAAGATTGAAGCGAGGGGGACACTGACCGGGGAGAAGGTGGAGCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
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| CDS CAA 72 bp | CCGGTCAGTGTCCCCCTCGCTTCAATCTTTGTACAGTaGTCACACACAACGTCTCGCACGGACTCTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: PVSVPLASIFVQ*SHTTSRTDSDE Trigger: CTCATCAGAGTCCGTGCGAGACGTTGTGTGTGACAACTGTACAAAGATTGAAGCGAGGGGGACACTGACCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
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| CDS CAA 72 bp | TTGCGGACGGTGTCGTCAGAAATCCACAGCCATTGGTaGCTGGTTGAGAGAGGGTTCTTGGCAGAAGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LRTVSSEIHSHW*LVERGFLAEGG Trigger: ACCACCTTCTGCCAAGAACCCTCTCTCAACCAGCAACCAATGGCTGTGGATTTCTGACGACACCGTCCGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS CAA 90 bp | ACCTTCTCCCCGGTCAGTGTCCCCCTCGCTTCAATCTTTGTACAGTaGTCACACACAACGTCTCGCACGGACTCTGATGAGATGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: TFSPVSVPLASIFVQ*SHTTSRTDSDEMKW Trigger: CCACTTCATCTCATCAGAGTCCGTGCGAGACGTTGTGTGTGACAACTGTACAAAGATTGAAGCGAGGGGGACACTGACCGGGGAGAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
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| CDS TCA 72 bp | GAGGGTTCTTGGCAGAAGGTGGTGACCGTCTGTAGGTaGCAAAGTGTCCAGAGTGCATGTCTCCATGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: EGSWQKVVTVCR*QSVQSACLHGE Trigger: TTCACCATGGAGACATGCACTCTGGACACTTTGTCACCTACAGACGGTCACCACCTTCTGCCAAGAACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS GCA 72 bp | GTGTGGCAAGTGACTTGTCTGGGAGCCATTTCTGACTaGTGCTCCAGGGAATGCACATCAAACAAGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VWQVTCLGAISD*CSRECTSNKWV Trigger: CACCCACTTGTTTGATGTGCATTCCCTGGAGCAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS GCA 72 bp | GTGTCCAGAGTGCATGTCTCCATGGTGAACGACAACTaGCATCAAGCGGAAGAGGTATGTGGAGGAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: VSRVHVSMVNDN*HQAEEVCGGAV Trigger: TACAGCTCCTCCACATACCTCTTCCGCTTGATGGCAGTTGTCGTTCACCATGGAGACATGCACTCTGGACAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS TCA 72 bp | TCTCGTGTGGCAAGTGACTTGTCTGGGAGCCATTTCTaGCTGCTGCTCCAGGGAATGCACATCAAACAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SRVASDLSGSHF*LLLQGMHIKQV Trigger: CACTTGTTTGATGTGCATTCCCTGGAGCAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACACGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031588.12 |
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| CDS TCA 72 bp | TCTCGTGTGGCAAGTGACTTGTCTGGGAGCCATTTCTaGCTGCTCCAGGGAATGCACATCAAACAAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SRVASDLSGSHF*LLQGMHIKQVG Trigger: ACCCACTTGTTTGATGTGCATTCCCTGGAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACACGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200119.3 |
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| CDS GCA 72 bp | GTGTGGCAAGTGACTTGTCTGGGAGCCATTTCTGACTaGTCCAGGGAATGCACATCAAACAAGTGGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: VWQVTCLGAISD*SRECTSNKWVT Trigger: AGTCACCCACTTGTTTGATGTGCATTCCCTGGAGCAGTCAGAAATGGCTCCCAGACAAGTCACTTGCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200119.3 |
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| CDS TCA 72 bp | TCTGGTGTTCACAGTGTTTGCACACCATGTTACTGGTaGGTCTTCCATGGAAAGGGTGCTGAGACTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SGVHSVCTPCYW*VFHGKGAETSS Trigger: ACTGGAAGTCTCAGCACCCTTTCCATGGAAGACTCACCAGTAACATGGTGTGCAAACACTGTGAACACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031588.12 ENSMUST00000200119.3 |
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