Pregenerated sensors for USP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032376Ensembl transcript IDs: ENSMUST00000098613.9, ENSMUST00000127569.8, ENSMUST00000139547.8, ENSMUST00000174387.2
Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCTGAGTGCTGGAACTAAAGGCGAGCGCCACCACTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPRTQKSACL*LLSAGTKGERHHCP Trigger: CGGGCAGTGGTGGCGCTCGCCTTTAGTTCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR TCA 90 bp | GACACAGCAGTGGTGACGGCCTGGTCTGCAGTCGGAAGGAATTCCTaGGCAGTCACTGTGAAACCGGTGGGCCACAGACCTGCACACACG | + |
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Preference number: 1 (lower is better) Translates to: DTAVVTAWSAVGRNS*AVTVKPVGHRPAHT Trigger: CGTGTGTGCAGGTCTGTGGCCCACCGGTTTCACAGTGACTGCTCAGGAATTCCTTCCGACTGCAGACCAGGCCGTCACCACTGCTGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR GCA 90 bp | AAGGAATTCCTGAGCAGTCACTGTGAAACCGGTGGGCCACAGACCTaGACACACGATCCTCACGATGGAGTCGCTGACCTGGCTGCTATG | + |
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Preference number: 1 (lower is better) Translates to: KEFLSSHCETGGPQT*THDPHDGVADLAAM Trigger: CATAGCAGCCAGGTCAGCGACTCCATCGTGAGGATCGTGTGTGCAGGTCTGTGGCCCACCGGTTTCACAGTGACTGCTCAGGAATTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR GCA 90 bp | TGCCCAGTGGTGACAGTCACACACACATGTGCCTCCTCTTTCCTGTaGTGTGGCATCTTCTCGGGGCTGTCAGAAGACCCATGCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: CPVVTVTHTCASSFL*CGIFSGLSEDPCSG Trigger: TCCAGAGCATGGGTCTTCTGACAGCCCCGAGAAGATGCCACAGCACAGGAAAGAGGAGGCACATGTGTGTGTGACTGTCACCACTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR CCA 90 bp | TGGGGAGGGCGGGTGTCAGGATCCAGACTTACTCGAAGCCATCTGTaGTTCGGCTTATGTTCAGAGGGCCTGAAAGTCCTGGCAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: WGGRVSGSRLTRSHL*FGLCSEGLKVLAEE Trigger: CTCTTCTGCCAGGACTTTCAGGCCCTCTGAACATAAGCCGAACCACAGATGGCTTCGAGTAAGTCTGGATCCTGACACCCGCCCTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR GCA 90 bp | TCTTTCCTGTGCTGTGGCATCTTCTCGGGGCTGTCAGAAGACCCATaGTCTGGAAACAGTTCCTACCTGAGCCTTTCCAAAGCCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: SFLCCGIFSGLSEDP*SGNSSYLSLSKAWA Trigger: TGCCCAGGCTTTGGAAAGGCTCAGGTAGGAACTGTTTCCAGAGCATGGGTCTTCTGACAGCCCCGAGAAGATGCCACAGCACAGGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR CCA 90 bp | AGTGGTGACAGTCACACACACATGTGCCTCCTCTTTCCTGTGCTGTaGCATCTTCTCGGGGCTGTCAGAAGACCCATGCTCTGGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: SGDSHTHMCLLFPVL*HLLGAVRRPMLWKQ Trigger: CTGTTTCCAGAGCATGGGTCTTCTGACAGCCCCGAGAAGATGCCACAGCACAGGAAAGAGGAGGCACATGTGTGTGTGACTGTCACCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR TCA 90 bp | ACTTGGAGTTTCCTGTTGCCATGGGCTGACAGGACAGGATATGCATaGGGCCCTGCCTCAGCATACGCTCTGAGCAAAAGTTGCATGCAG | + |
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Preference number: 1 (lower is better) Translates to: TWSFLLPWADRTGYA*GPASAYALSKSCMQ Trigger: CTGCATGCAACTTTTGCTCAGAGCGTATGCTGAGGCAGGGCCTCATGCATATCCTGTCCTGTCAGCCCATGGCAACAGGAAACTCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR GCA 90 bp | TGTCACAGTGCTGTCATTGAAATGGAACCAGCGGCCTTCGTGAACTaGATATGCTGTGTAATGTCCAGAACCAACCCCAGAGCCATGGTG | + |
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Preference number: 1 (lower is better) Translates to: CHSAVIEMEPAAFVN*ICCVMSRTNPRAMV Trigger: CACCATGGCTCTGGGGTTGGTTCTGGACATTACACAGCATATGCAGTTCACGAAGGCCGCTGGTTCCATTTCAATGACAGCACTGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR TCA 90 bp | CCTTCCCAACGGTCTCCTCATCAGTCACTGTCACAGTGCTGTCATTaGAATGGAACCAGCGGCCTTCGTGAACTGCATATGCTGTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: PSQRSPHQSLSQCCH*NGTSGLRELHMLCN Trigger: ATTACACAGCATATGCAGTTCACGAAGGCCGCTGGTTCCATTTCAATGACAGCACTGTGACAGTGACTGATGAGGAGACCGTTGGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR GCA 90 bp | AGTGCTGTCATTGAAATGGAACCAGCGGCCTTCGTGAACTGCATATaGTGTGTAATGTCCAGAACCAACCCCAGAGCCATGGTGTACAAC | + |
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Preference number: 1 (lower is better) Translates to: SAVIEMEPAAFVNCI*CVMSRTNPRAMVYN Trigger: GTTGTACACCATGGCTCTGGGGTTGGTTCTGGACATTACACAGCATATGCAGTTCACGAAGGCCGCTGGTTCCATTTCAATGACAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR TCA 90 bp | TCGAGGAGGTGGATGTGGAACAGGCTGTGTTGGAGTTGTACACTCTaGCTTAAAGGTTTCAATACCTGCAAACCGAATCACTGGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SRRWMWNRLCWSCTL*LKGFNTCKPNHWPP Trigger: TGGAGGCCAGTGATTCGGTTTGCAGGTATTGAAACCTTTAAGTCAGAGTGTACAACTCCAACACAGCCTGTTCCACATCCACCTCCTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR TCA 90 bp | AATGACATCTTGGCATCATACAGACTACTAAGTCTTAATGGCCAATaGTCTTGGCATGGCCACCACTCCCTTGAGGGCTACTGCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: NDILASYRLLSLNGQ*SWHGHHSLEGYCPV Trigger: CACTGGGCAGTAGCCCTCAAGGGAGTGGTGGCCATGCCAAGATCATTGGCCATTAAGACTTAGTAGTCTGTATGATGCCAAGATGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR TCA 90 bp | GACTTACTCGAAGCCATCTGTGGTTCGGCTTATGTTCAGAGGGCCTaGAAGTCCTGGCAGAAGAGCAGCCCATTGAAGTTACAAGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: DLLEAICGSAYVQRA*KSWQKSSPLKLQVF Trigger: GAAAACTTGTAACTTCAATGGGCTGCTCTTCTGCCAGGACTTTCAGGCCCTCTGAACATAAGCCGAACCACAGATGGCTTCGAGTAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR CCA 90 bp | GATGACTCATGGTCAGGAGGTATTACAGTTTTTCTGCTCCAGCTCTaGCCTGACGCTCCACATAAAACAGAATGTAGGCCTTTGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: DDSWSGGITVFLLQL*PDAPHKTECRPLPS Trigger: GGAAGGCAAAGGCCTACATTCTGTTTTATGTGGAGCGTCAGGCCAGAGCTGGAGCAGAAAAACTGTAATACCTCCTGACCATGAGTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR TCA 90 bp | TTTCCAAAGCCTGGGCAAGAGGTGACTTCAGCAGTTGGAGGACCATaGGAGAGTTTAGGGGACGGTAGAGGTTACAATGGGTTAAACATA | + |
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Preference number: 1 (lower is better) Translates to: FPKPGQEVTSAVGGP*ESLGDGRGYNGLNI Trigger: TATGTTTAACCCATTGTAACCTCTACCGTCCCCTAAACTCTCTCATGGTCCTCCAACTGCTGAAGTCACCTCTTGCCCAGGCTTTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR TCA 90 bp | CTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCCCAAACTGTaGGTGGAATCTGAGGATCATGCTTGGTACTTTAGCTCAGGACAC | + |
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Preference number: 1 (lower is better) Translates to: LTLARKRSFLPCPKL*VESEDHAWYFSSGH Trigger: GTGTCCTGAGCTAAAGTACCAAGCATGATCCTCAGATTCCACTCACAGTTTGGGGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR GCA 90 bp | TTGACAGTGCCAGCTCTGTGTGCGTACTGTGTAAGTCATTACAGTTaGCCAGTCAGAGGCAAAGATATAAATGCCAGAGGAGCCTGGATT | + |
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Preference number: 1 (lower is better) Translates to: LTVPALCAYCVSHYS*PVRGKDINARGAWI Trigger: AATCCAGGCTCCTCTGGCATTTATATCTTTGCCTCTGACTGGGCAACTGTAATGACTTACACAGTACGCACACAGAGCTGGCACTGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR CCA 90 bp | CACAGGTGTGACACACGACACTCAACCAGGGCCAGCGCATATGACTaGTTTAATTACATCATCTGCCACTACACACTGAGTAGAATACAG | + |
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Preference number: 1 (lower is better) Translates to: HRCDTRHSTRASAYD*FNYIICHYTLSRIQ Trigger: CTGTATTCTACTCAGTGTGTAGTGGCAGATGATGTAATTAAACCAGTCATATGCGCTGGCCCTGGTTGAGTGTCGTGTGTCACACCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR CCA 90 bp | ACTAAGGTGTTTTCATTGGAGGTAATTAGCGACAACAGCCCTTCCTaGGCTTGCAGCCTTTCTCCTAGCAGGACAGTGAGTATTAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TKVFSLEVISDNSPS*ACSLSPSRTVSISC Trigger: ACAGCTAATACTCACTGTCCTGCTAGGAGAAAGGCTGCAAGCCCAGGAAGGGCTGTTGTCGCTAATTACCTCCAATGAAAACACCTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR CCA 90 bp | AACTCTTCTACTAAAGACACATTGCTGTCCCCTTGGCTCCTGGTGTaGTATGTTCGCCTTCCTGCTGTTTTCCCATTCCTTAACTCCACA | + |
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Preference number: 1 (lower is better) Translates to: NSSTKDTLLSPWLLV*YVRLPAVFPFLNST Trigger: TGTGGAGTTAAGGAATGGGAAAACAGCAGGAAGGCGAACATACCACACCAGGAGCCAAGGGGACAGCAATGTGTCTTTAGTAGAAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR TCA 90 bp | GTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGGAGTaGATTAAAACCCAGAGCTTCTATGACTCCACTTCTGCCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: VQRHILSPGSASGRE*IKTQSFYDSTSAWK Trigger: CTTCCAGGCAGAAGTGGAGTCATAGAAGCTCTGGGTTTTAATTCACTCCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR TCA 90 bp | CAGCTGCCCTGCTTTTTAGGAAGCTGTGCTGCAGATCTGGAAGTATaGAGCTGCTCTAAGTGCATACAACTTGGTGGAAACCTAAGACTA | + |
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Preference number: 1 (lower is better) Translates to: QLPCFLGSCAADLEV*SCSKCIQLGGNLRL Trigger: TAGTCTTAGGTTTCCACCAAGTTGTATGCACTTAGAGCAGCTTCATACTTCCAGATCTGCAGCACAGCTTCCTAAAAAGCAGGGCAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR GCA 90 bp | CACATGTACTTCATCATGGGTGTTCAGATGGGCACTGCATATGGGTaGAGTCACTTTCTCAAAGAGTCTTCATGGTGTCACTCAGCCATT | + |
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Preference number: 1 (lower is better) Translates to: HMYFIMGVQMGTAYG*SHFLKESSWCHSAI Trigger: AATGGCTGAGTGACACCATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACACCCATGATGAAGTACATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR CCA 90 bp | AACTTCCTCGACTCTGTCCCACATATGAGGCAGTTGACCTCGTTCTaGAGAATTCCTCCAAATATTGCTGTGACAACAGTTGATGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: NFLDSVPHMRQLTSF*RIPPNIAVTTVDAP Trigger: TGGAGCATCAACTGTTGTCACAGCAATATTTGGAGGAATTCTCCAGAACGAGGTCAACTGCCTCATATGTGGGACAGAGTCGAGGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR CCA 90 bp | CCCTTGCTAGGAAGAGGTCATTTTTACCATGCCCCAAACTGTGAGTaGAATCTGAGGATCATGCTTGGTACTTTAGCTCAGGACACTAAT | + |
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Preference number: 1 (lower is better) Translates to: PLLGRGHFYHAPNCE*NLRIMLGTLAQDTN Trigger: ATTAGTGTCCTGAGCTAAAGTACCAAGCATGATCCTCAGATTCCACTCACAGTTTGGGGCATGGTAAAAATGACCTCTTCCTAGCAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR TCA 90 bp | TATGGCACATATACAACTCTGTCTCATCAAGTTCCTCTAGGTCAGTaGAGCTGCGAAGGCAATCTCTTAAGGAGCAAACTGGCCCATTTT | + |
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Preference number: 1 (lower is better) Translates to: YGTYTTLSHQVPLGQ*SCEGNLLRSKLAHF Trigger: AAAATGGGCCAGTTTGCTCCTTAAGAGATTGCCTTCGCAGCTTCACTGACCTAGAGGAACTTGATGAGACAGAGTTGTATATGTGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR GCA 90 bp | CACTCAACCAGGGCCAGCGCATATGACTGGTTTAATTACATCATCTaGCACTACACACTGAGTAGAATACAGTGGATAAGCTTAGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: HSTRASAYDWFNYII*HYTLSRIQWISLEF Trigger: GAACTCTAAGCTTATCCACTGTATTCTACTCAGTGTGTAGTGGCAGATGATGTAATTAAACCAGTCATATGCGCTGGCCCTGGTTGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR CCA 90 bp | TGGTTTAATTACATCATCTGCCACTACACACTGAGTAGAATACAGTaGATAAGCTTAGAGTTCTCCACCATGGAGAGACTTGTGTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: WFNYIICHYTLSRIQ*ISLEFSTMERLVLP Trigger: TGGCAACACAAGTCTCTCCATGGTGGAGAACTCTAAGCTTATCCACTGTATTCTACTCAGTGTGTAGTGGCAGATGATGTAATTAAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR CCA 90 bp | ATTGAAAAGTGCATACTGAAATTTGACTCTTGGATCAAGTATTTATaGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCA | + |
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Preference number: 1 (lower is better) Translates to: IEKCILKFDSWIKYL*KMEMLSGVVDDSWS Trigger: TGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAAATACTTGATCCAAGAGTCAAATTTCAGTATGCACTTTTCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 ENSMUST00000174387.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGGTACTTGCCCTGCACTGTCCTGTACCCAGCCCTGACATAACTAGTGTGGAGACACAGCAGTGGTaGCGGCCTGGTCTGCAGTCG | + |
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Preference number: 2 (lower is better) Translates to: GKVLALHCPVPSPDITSVETQQW*RPGLQS Trigger: CGACTGCAGACCAGGCCGTCACCACTGCTGTGTCTC...CACACTAGTTATGTCAGGGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGGCTCAAACCAGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACAGCGGCCCAGTCTGCTaGTGCTGCTCCACCTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SVAQTSRTRAAHASTSWNSGPVC*CCSTWL Trigger: AAGCCAGGTGGAGCAGCAGCAGCAGACTGGGCCGCT...GTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCTGGTTTGAGCCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAAGGTACTTGCCCTGCACTGTCCTGTACCCAGCCCTGACATAACTAGTGTGGAAAGGTACTTGCCCTaGACTGTCCTGTACCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GKVLALHCPVPSPDITSVERYLP*TVLYPA Trigger: GGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTC...CACACTAGTTATGTCAGGGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR CAA 90 bp | GCTGTTAGGTATCAGAGTGTGTCGGTGCGGCTCCTCTGCTCACCCTaGCTAGGAAGAGGTCATTTTTACCATGCCCCAAACTGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: AVRYQSVSVRLLCSP*LGRGHFYHAPNCEW Trigger: CCACTCACAGTTTGGGGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGCACCGACACACTCTGATACCTAACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR CAA 90 bp | CTCCAGCTCTGGCCTGACGCTCCACATAAAACAGAATGTAGGCCTTaGCCTTCCCAACGGTCTCCTCATCAGTCACTGTCACAGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LQLWPDAPHKTECRP*PSQRSPHQSLSQCC Trigger: ACAGCACTGTGACAGTGACTGATGAGGAGACCGTTGGGAAGGCAAAGGCCTACATTCTGTTTTATGTGGAGCGTCAGGCCAGAGCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGATGGTCAGACAGATCCACCCACAGGACATACCTCTACCATGCAGCTGAATCTGACCTGGCTGCTATaGAGACAGCAGTCAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SDGQTDPPTGHTSTMQLNLTWLL*RQQSGW Trigger: CCACCCTGACTGCTGTCTTCATAGCAGCCAGGTCAG...ATTCAGCTGCATGGTAGAGGTATGTCCTGTGGGTGGATCTGTCTGACCATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTCATTACAGTTGCCCAGTCAGAGGCAAAGATATAAATGCCAGAGGAGCCTGGAGACACAGCAGTGGTaGCGGCCTGGTCTGCAGTCG | + |
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Preference number: 2 (lower is better) Translates to: KSLQLPSQRQRYKCQRSLETQQW*RPGLQS Trigger: CGACTGCAGACCAGGCCGTCACCACTGCTGTGTCTC...CAGGCTCCTCTGGCATTTATATCTTTGCCTCTGACTGGGCAACTGTAATGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR GCA 90 bp | AAGACCAGAGACAAGAAATGGAGCAGTTCTGGAACTCTAGCACAGGTGCAACGGGGTGACGGCCTGGTCTaGAGTCGGAAGGAATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KTRDKKWSSSGTLAQVQRGDGLV*SRKEFL Trigger: CAGGAATTCCTTCCGACTGCAGACCAGGCCGTCACC...CCGTTGCACCTGTGCTAGAGTTCCAGAACTGCTCCATTTCTTGTCTCTGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGCAACGGGACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGGCAGTCTGGCTGCCTTaGCATAAAGCACACAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: QVQRDWQSYLMLRHSNPEAVWLP*HKAHSV Trigger: GACACTGTGTGCTTTATGGCAAGGCAGCCAGACTGC...CTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTCCCGTTGCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACTCAGCACACTTCCTCGTAAGACCTCACCTCTaGTGGTCAGACAGATCCACC | + |
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Preference number: 2 (lower is better) Translates to: SRTRAAHASTSWNSAHFLVRPHL*WSDRST Trigger: GGTGGATCTGTCTGACCATCAGAGGTGAGGTCTTAC...GAGGAAGTGTGCTGAGTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR TCA 90 bp | GCGGCTCCTCTGCTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCCCAAAAACCCAGAGCTTCTATaGCTCCACTTCTGCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: AAPLLTLARKRSFLPCPKNPELL*LHFCLE Trigger: TTCCAGGCAGAAGTGGAGTCATAGAAGCTCTGGGTT...TTTGGGGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGGTACTTGCCCTGCACTGTCCTGTACCCAGCCCTGACATAACTAGTGTGTCACAGTGCTGTCATTaGAATGGAACCAGCGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GKVLALHCPVPSPDITSVSQCCH*NGTSGL Trigger: AAGGCCGCTGGTTCCATTTCAATGACAGCACTGTGA...CACACTAGTTATGTCAGGGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR-3UTR GCA 90 bp | TCGGTGCGGCTCCTCTGCTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCACTTTCACCTGGTTCTaGTTCAGGCAGGGAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: SVRLLCSPLLGRGHFYHATFTWF*FRQGVN Trigger: ATTCACTCCCTGCCTGAAGCAGAACCAGGTGAAAGT...GGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGCACCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGGCTCAAACCAGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACCTGTGTGGGAGGACTTaGAGTTTCCTGTTGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: SVAQTSRTRAAHASTSWNLCGRT*SFLLPW Trigger: CCATGGCAACAGGAAACTCCAAGTCCTCCCACACAG...GTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCTGGTTTGAGCCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGGCTCAAACCAGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACCTATCCCCACCTGTGTaGGAGGACTTGGAGTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SVAQTSRTRAAHASTSWNLSPPV*EDLEFP Trigger: AGGAAACTCCAAGTCCTCCCACACAGGTGGGGATAG...GTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCTGGTTTGAGCCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGGTGCGGCTCCTCTGCTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCAGAAGACCCATGCTCTaGAAACAGTTCCTACCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SVRLLCSPLLGRGHFYHARRPML*KQFLPE Trigger: CTCAGGTAGGAACTGTTTCCAGAGCATGGGTCTTCT...GGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGCACCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR-3UTR CCA 90 bp | CATATGCTGTGTAATGTCCAGAACCAACCCCAGAGCCATGGTGTACAACCACAGTGTCCCCTTGGCTCCTaGTGTGGTATGTTCGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HMLCNVQNQPQSHGVQPQCPLGS*CGMFAF Trigger: GAAGGCGAACATACCACACCAGGAGCCAAGGGGACA...CTGTGGTTGTACACCATGGCTCTGGGGTTGGTTCTGGACATTACACAGCATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTGCAACGGGACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGTTTCTGCTCCAGCTCTaGCCTGACGCTCCACATAAA | + |
|
Preference number: 2 (lower is better) Translates to: QVQRDWQSYLMLRHSNPEFLLQL*PDAPHK Trigger: TTTATGTGGAGCGTCAGGCCAGAGCTGGAGCAGAAA...CTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTCCCGTTGCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTCATTACAGTTGCCCAGTCAGAGGCAAAGATATAAATGCCAGAGGAGCCTGCTGACCTGGCTGCTATaGAGACAGCAGTCAGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: KSLQLPSQRQRYKCQRSLLTWLL*RQQSGW Trigger: CCACCCTGACTGCTGTCTTCATAGCAGCCAGGTCAG...CAGGCTCCTCTGGCATTTATATCTTTGCCTCTGACTGGGCAACTGTAATGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGTAGTTGATGACTCATGGTCAGGAGGTATTACAGTTTTTCTGCTCCAGCTCCTGACCTGGCTGCTATaGAGACAGCAGTCAGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GVVDDSWSGGITVFLLQLLTWLL*RQQSGW Trigger: CCACCCTGACTGCTGTCTTCATAGCAGCCAGGTCAG...GAGCTGGAGCAGAAAAACTGTAATACCTCCTGACCATGAGTCATCAACTACACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | GACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGACACAGCAGTGGCCAAAAGGTAGCGCATaGATTCATGGGCATCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: DWQSYLMLRHSNPETQQWPKGSA*IHGHPA Trigger: AGCAGGATGCCCATGAATTCATGCGCTACCTTTTGG...CCACTGCTGTGTCTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGACTTGTGTTGCCACAAACTGTTTCTATCCCCACCTGTGTGGGAGGACTTGTCGAGGAGGTGGATGTaGAACAGGCTGTGTTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RDLCCHKLFLSPPVWEDLSRRWM*NRLCWS Trigger: ACTCCAACACAGCCTGTTCCACATCCACCTCCTCGA...CAAGTCCTCCCACACAGGTGGGGATAGAAACAGTTTGTGGCAACACAAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACAGAACCCCTTAATGACTACTCCCCTTTCCTCCTGCCCATGTAGGCTACAACATGCCTCTACCTCATaGAACTCAGCACACTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: PQNPLMTTPLSSCPCRLQHASTS*NSAHFL Trigger: GAGGAAGTGTGCTGAGTTCCATGAGGTAGAGGCATG...TTGTAGCCTACATGGGCAGGAGGAAAGGGGAGTAGTCATTAAGGGGTTCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGGTACTTGCCCTGCACTGTCCTGTACCCAGCCCTGACATAACTAGTGTGGATGGGCACTGCATATaGGTGCAGTCACTTTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: GKVLALHCPVPSPDITSVDGHCI*VQSLSQ Trigger: TTGAGAAAGTGACTGCACCCATATGCAGTGCCCATC...CACACTAGTTATGTCAGGGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | GACAACAGCCCTTCCTGGGCTTGCAGCCTTTCTCCTAGCAGGACAGTGAGTATTGCCCCAAACTGTGAGTaGAATCTGAGGATCATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: DNSPSWACSLSPSRTVSIAPNCE*NLRIML Trigger: AAGCATGATCCTCAGATTCCACTCACAGTTTGGGGC...AATACTCACTGTCCTGCTAGGAGAAAGGCTGCAAGCCCAGGAAGGGCTGTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTAGAATTCTCCTGTAGAATTGCTGAGCGGGAAACACCATTGAAGCCACCCCCTTGGCTCCTGGTGTaGTATGTTCGCCTTCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SVEFSCRIAERETPLKPPPWLLV*YVRLPA Trigger: AGCAGGAAGGCGAACATACCACACCAGGAGCCAAGG...GGGTGGCTTCAATGGTGTTTCCCGCTCAGCAATTCTACAGGAGAATTCTACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGGCTCAAACCAGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACACATTGCTGTCCCCTTaGCTCCTGGTGTGGTATGTT | + |
|
Preference number: 2 (lower is better) Translates to: SVAQTSRTRAAHASTSWNTLLSP*LLVWYV Trigger: AACATACCACACCAGGAGCCAAGGGGACAGCAATGT...GTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCTGGTTTGAGCCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTCATTACAGTTGCCCAGTCAGAGGCAAAGATATAAATGCCAGAGGAGCCTGGCTACTGCCCAGTGGTaGCAGTCACACACACATGTG | + |
|
Preference number: 2 (lower is better) Translates to: KSLQLPSQRQRYKCQRSLATAQW*QSHTHV Trigger: CACATGTGTGTGTGACTGTCACCACTGGGCAGTAGC...CAGGCTCCTCTGGCATTTATATCTTTGCCTCTGACTGGGCAACTGTAATGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR-3UTR TCA 90 bp | CATATGCTGTGTAATGTCCAGAACCAACCCCAGAGCCATGGTGTACAACCACAGAGCGGGAAACACCATTaGAGCCACCCTGAAGTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: HMLCNVQNQPQSHGVQPQSGKHH*SHPEVL Trigger: TAGAACTTCAGGGTGGCTTCAATGGTGTTTCCCGCT...CTGTGGTTGTACACCATGGCTCTGGGGTTGGTTCTGGACATTACACAGCATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGGTACTTGCCCTGCACTGTCCTGTACCCAGCCCTGACATAACTAGTGTGACATGTACTTCATCATaGGTGTTCAGATGGGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: GKVLALHCPVPSPDITSVTCTSS*VFRWAL Trigger: CAGTGCCCATCTGAACACCCATGATGAAGTACATGT...CACACTAGTTATGTCAGGGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR CAA 90 bp | CTTGACAGTGCCAGCTCTGTGTGCGTACTGTGTAAGTCATTACAGTaGCCCAGTCAGAGGCAAAGATATAAATGCCAGAGGAGCCTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LDSASSVCVLCKSLQ*PSQRQRYKCQRSLD Trigger: ATCCAGGCTCCTCTGGCATTTATATCTTTGCCTCTGACTGGGCAACTGTAATGACTTACACAGTACGCACACAGAGCTGGCACTGTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGGTGTCGGAAGGAATTCCTaGGCAGTCACTGTGAAACCG | + |
|
Preference number: 2 (lower is better) Translates to: FRWALHMGAVTFSKSLHGVGRNS*AVTVKP Trigger: CGGTTTCACAGTGACTGCTCAGGAATTCCTTCCGAC...ACCATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTGCATATGCTGTGTAATGTCCAGAACCAACCCCAGAGCCATGGTGTACAACGCTTCAGGCAGGGAGTaGATTAAAACCCAGAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: NCICCVMSRTNPRAMVYNASGRE*IKTQSF Trigger: GAAGCTCTGGGTTTTAATTCACTCCCTGCCTGAAGC...GTTGTACACCATGGCTCTGGGGTTGGTTCTGGACATTACACAGCATATGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGGCTCAAACCAGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACCGCTTGCTTCTGAACTaGCTTGGAATATCTAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SVAQTSRTRAAHASTSWNRLLLN*LGISKE Trigger: CTCCTTAGATATTCCAAGTCAGTTCAGAAGCAAGCG...GTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCTGGTTTGAGCCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | CATATGCTGTGTAATGTCCAGAACCAACCCCAGAGCCATGGTGTACAACCACAGACTGGCCCATTTTCCTaGTTCTTAGAGCGCTTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: HMLCNVQNQPQSHGVQPQTGPFS*FLERLL Trigger: AAGCAAGCGCTCTAAGAATCAGGAAAATGGGCCAGT...CTGTGGTTGTACACCATGGCTCTGGGGTTGGTTCTGGACATTACACAGCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGTCGAGGAGGTGGATGTaGAACAGGCTGTGTTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: CSDGHCIWVQSLSQRVFMSRRWM*NRLCWS Trigger: ACTCCAACACAGCCTGTTCCACATCCACCTCCTCGA...CATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR CAA 90 bp | ATACAGTGGATAAGCTTAGAGTTCTCCACCATGGAGAGACTTGTGTaGCCACAAACTGTTTCTATCCCCACCTGTGTGGGAGGACTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: IQWISLEFSTMERLV*PQTVSIPTCVGGLG Trigger: TCCAAGTCCTCCCACACAGGTGGGGATAGAAACAGTTTGTGGCAACACAAGTCTCTCCATGGTGGAGAACTCTAAGCTTATCCACTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR TCA 90 bp | GCGGCTCCTCTGCTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCCCAAAATACGGTCATTGTACTaGGGGATTCAAGTTAGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: AAPLLTLARKRSFLPCPKIRSLY*GIQVSV Trigger: TACACTAACTTGAATCCCTCAGTACAATGACCGTAT...TTTGGGGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACTCAGCACACTTCCTCAAAGGTTTCAATACCTaGAAACCGAATCACTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SRTRAAHASTSWNSAHFLKGFNT*KPNHWP Trigger: AGGCCAGTGATTCGGTTTGCAGGTATTGAAACCTTT...GAGGAAGTGTGCTGAGTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGGTGCGGCCTTCGTGAACTaGATATGCTGTGTAATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: FRWALHMGAVTFSKSLHGAAFVN*ICCVMS Trigger: GGACATTACACAGCATATGCAGTTCACGAAGGCCGC...ACCATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR-3UTR CCA 90 bp | AATGGATCAAACTTCCTCGACTCTGTCCCACATATGAGGCAGTTGACCTCGTTCGGCCTGTGGCACAAATaGCAGTCGTACTTCCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: NGSNFLDSVPHMRQLTSFGLWHK*QSYFHL Trigger: TAAATGGAAGTACGACTGCCATTTGTGCCACAGGCC...GAACGAGGTCAACTGCCTCATATGTGGGACAGAGTCGAGGAAGTTTGATCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGGGTCGGAAGGAATTCCTaGGCAGTCACTGTGAAACCG | + |
|
Preference number: 2 (lower is better) Translates to: KLFLFRDIYFHLVLLQAGVGRNS*AVTVKP Trigger: CGGTTTCACAGTGACTGCTCAGGAATTCCTTCCGAC...CCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| 3UTR-3UTR TCA 90 bp | CATATGCTGTGTAATGTCCAGAACCAACCCCAGAGCCATGGTGTACAACCACAGCTCCAAATATTGCTGTaGCAACAGTTGATGCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: HMLCNVQNQPQSHGVQPQLQILL*QQLMLH Trigger: ATGGAGCATCAACTGTTGTCACAGCAATATTTGGAG...CTGTGGTTGTACACCATGGCTCTGGGGTTGGTTCTGGACATTACACAGCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACCCATGCTCTGGAAACAGTTCCTACCTGAGCCTTTCCAAAGCCTGGGCAAGACAAAAATTAGTTGGTaGTCATGTTGGGTAAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: RPMLWKQFLPEPFQSLGKTKISW*SCWVSH Trigger: GTGACTTACCCAACATGAGCACCAACTAATTTTTGT...CTTGCCCAGGCTTTGGAAAGGCTCAGGTAGGAACTGTTTCCAGAGCATGGGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAAAGGTACTTGCCCTGCACTGTCCTGTACCCAGCCCTGACATAACTAGTGTGACAAAAATTAGTTGGTaGTCATGTTGGGTAAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: GKVLALHCPVPSPDITSVTKISW*SCWVSH Trigger: GTGACTTACCCAACATGAGCACCAACTAATTTTTGT...CACACTAGTTATGTCAGGGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTGGCTCAAACCAGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACTCACTCAGCCATTGCTaGTTAAGTAAAACCAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SVAQTSRTRAAHASTSWNSLSHC*LSKTKQ Trigger: TTGCTTGGTTTTACTTAAGCAGCAATGGCTGAGTGA...GTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCTGGTTTGAGCCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCATTACAGTTGCCCAGTCAGAGGCAAAGATATAAATGCCAGAGGAGCCTGGATGGGCACTGCATATaGGTGCAGTCACTTTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: KSLQLPSQRQRYKCQRSLDGHCI*VQSLSQ Trigger: TTGAGAAAGTGACTGCACCCATATGCAGTGCCCATC...CAGGCTCCTCTGGCATTTATATCTTTGCCTCTGACTGGGCAACTGTAATGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGGCTCAAACCAGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACCTGAGTAGAATACAGTaGATAAGCTTAGAGTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SVAQTSRTRAAHASTSWNLSRIQ*ISLEFS Trigger: GGAGAACTCTAAGCTTATCCACTGTATTCTACTCAG...GTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCTGGTTTGAGCCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTTTGTTGTTCTGCATAAAATTTAGACCTGTGTTGTGCAAGAGAACCCTACCAACCCCAGAGCCATaGTGTACAACCACAGCAGCG | + |
|
Preference number: 2 (lower is better) Translates to: TALLFCIKFRPVLCKRTLPTPEP*CTTTAA Trigger: CGCTGCTGTGGTTGTACACCATGGCTCTGGGGTTGG...TAGGGTTCTCTTGCACAACACAGGTCTAAATTTTATGCAGAACAACAAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR CAA 90 bp | AGGAATGGATCAAACTTCCTCGACTCTGTCCCACATATGAGGCAGTaGACCTCGTTCTGGAGAATTCCTCCAAATATTGCTGTGACAACA | + |
|
Preference number: 2 (lower is better) Translates to: RNGSNFLDSVPHMRQ*TSFWRIPPNIAVTT Trigger: TGTTGTCACAGCAATATTTGGAGGAATTCTCCAGAACGAGGTCAACTGCCTCATATGTGGGACAGAGTCGAGGAAGTTTGATCCATTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCAGGGAGTGAATTAAAACCCAGAGCTTCTATGACTCCACTTCTGCCTGGAAATCAAAATGCCTGCTaGGGTTTTCTGGTAGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: QAGSELKPRASMTPLLPGNQNAC*GFLVEQ Trigger: TTGTTCTACCAGAAAACCTCAGCAGGCATTTTGATT...TCCAGGCAGAAGTGGAGTCATAGAAGCTCTGGGTTTTAATTCACTCCCTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCTTTGTTGTTCTGCATAAAATTTAGACCTGTGTTGTGCAAGAGAACCCTAGAAAGGTACTTGCCCTaGACTGTCCTGTACCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: TALLFCIKFRPVLCKRTLERYLP*TVLYPA Trigger: GGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTC...TAGGGTTCTCTTGCACAACACAGGTCTAAATTTTATGCAGAACAACAAAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGGCTACTAAAGACACATTaGTGTCCCCTTGGCTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: KLFLFRDIYFHLVLLQAGLLKTH*CPLGSW Trigger: CCAGGAGCCAAGGGGACAGCAATGTGTCTTTAGTAG...CCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | AATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAGGAAAGTCGAGGAGGTGGATGTaGAACAGGCTGTGTTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: NINVELSHVSINFTGQGKSRRWM*NRLCWS Trigger: ACTCCAACACAGCCTGTTCCACATCCACCTCCTCGA...CTTTCCTTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGAGTTCTCCACCATGGAGAGACTTGTGTTGCCACAAACTGTTTCTATCCCCTCAAAGAGTCTTCATaGTGTCACTCAGCCATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LRVLHHGETCVATNCFYPLKESS*CHSAIA Trigger: AGCAATGGCTGAGTGACACCATGAAGACTCTTTGAG...GGGATAGAAACAGTTTGTGGCAACACAAGTCTCTCCATGGTGGAGAACTCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGGCTTTTAAACACGTATTTGCACTTGTCAGTGTTCCTAGCCTGTCTGCCCCCCCAAACTGGAAATTaGAAAGTGCATACTGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: AGLLNTYLHLSVFLACLPPQTGN*KVHTEI Trigger: AATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGG...GGGCAGACAGGCTAGGAACACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCAGGGAGTGAATTAAAACCCAGAGCTTCTATGACTCCACTTCTGCCTGGACCCCAAACTGGAAATTaGAAAGTGCATACTGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: QAGSELKPRASMTPLLPGPQTGN*KVHTEI Trigger: AATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGG...TCCAGGCAGAAGTGGAGTCATAGAAGCTCTGGGTTTTAATTCACTCCCTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCAGGGAGTGAATTAAAACCCAGAGCTTCTATGACTCCACTTCTGCCTGGAACAAAAATTAGTTGGTaGTCATGTTGGGTAAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: QAGSELKPRASMTPLLPGTKISW*SCWVSH Trigger: GTGACTTACCCAACATGAGCACCAACTAATTTTTGT...TCCAGGCAGAAGTGGAGTCATAGAAGCTCTGGGTTTTAATTCACTCCCTGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | CCACAGAACCCCTTAATGACTACTCCCCTTTCCTCCTGCCCATGTAGGCTACAAACAGCTTTGTTGTTCTaGATAAAATTTAGACCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PQNPLMTTPLSSCPCRLQTALLF*IKFRPV Trigger: CACAGGTCTAAATTTTATGCAGAACAACAAAGCTGT...TTGTAGCCTACATGGGCAGGAGGAAAGGGGAGTAGTCATTAAGGGGTTCTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGTTCGTGAACTGCATATaGTGTGTAATGTCCAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: CSDGHCIWVQSLSQRVFMFVNCI*CVMSRT Trigger: GGTTCTGGACATTACACAGCATATGCAGTTCACGAA...CATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGGCAAGCACAGTGCCTTaGGAAGTTTTTGAATCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: CSDGHCIWVQSLSQRVFMASTVP*EVFESK Trigger: TTTGGATTCAAAAACTTCCCAAGGCACTGTGCTTGC...CATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGAGTTCTCCACCATGGAGAGACTTGTGTTGCCACAAACTGTTTCTATCCCAACAGCAAAACTGAGTaGCTGAAGGATAGCATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LRVLHHGETCVATNCFYPNSKTE*LKDSIH Trigger: ATGAATGCTATCCTTCAGTCACTCAGTTTTGCTGTT...GGGATAGAAACAGTTTGTGGCAACACAAGTCTCTCCATGGTGGAGAACTCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGAATTTCGAAGGCCTGTaGCACAAATGGCAGTCGTAC | + |
|
Preference number: 2 (lower is better) Translates to: KTILVQRHILSPGSASGRNFEGL*HKWQSY Trigger: GTACGACTGCCATTTGTGCCACAGGCCTTCGAAATT...CCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | CATACAACTTGGTGGAAACCTAAGACTACTACAGCTTCCCCTGAAAGAACTCCAAATCAAAATGCCTGCTaGGGTTTTCTGGTAGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: HTTWWKPKTTTASPERTPNQNAC*GFLVEQ Trigger: TTGTTCTACCAGAAAACCTCAGCAGGCATTTTGATT...TGGAGTTCTTTCAGGGGAAGCTGTAGTAGTCTTAGGTTTCCACCAAGTTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGGAGTAAAAAGTCTGCATaGAGTGCATTTTGTCCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: KLFLFRDIYFHLVLLQAGSKKSA*SAFCPS Trigger: CGAGGGACAAAATGCACTTCATGCAGACTTTTTACT...CCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTTGGAGTTGTACACTCTGACTTAAAGGTTTCAATACCTGCAAACCGAATCAGTGCCAGCTCTGTGTaGGTACTGTGTAAGTCATTA | + |
|
Preference number: 2 (lower is better) Translates to: CVGVVHSDLKVSIPANRISASSV*VLCKSL Trigger: TAATGACTTACACAGTACGCACACAGAGCTGGCACT...GATTCGGTTTGCAGGTATTGAAACCTTTAAGTCAGAGTGTACAACTCCAACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTTGGAGTTGTACACTCTGACTTAAAGGTTTCAATACCTGCAAACCGAATCGCTCTGAGCAAAAGTTaGATGCAGGTTAGAACACAC | + |
|
Preference number: 2 (lower is better) Translates to: CVGVVHSDLKVSIPANRIALSKS*MQVRTH Trigger: GTGTGTTCTAACCTGCATGCAACTTTTGCTCAGAGC...GATTCGGTTTGCAGGTATTGAAACCTTTAAGTCAGAGTGTACAACTCCAACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGGTTTGATGCTCCATTTATaGAGCATTTGTTACTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FRWALHMGAVTFSKSLHGLMLHL*SICYLQ Trigger: CTGCAAGTAACAAATGCTGCATAAATGGAGCATCAA...ACCATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR CAA 90 bp | TGTTCTGAGGGAATGAAGATTTCTGTAGCTAATATTAATGTGGAATaGAGCCACGTCTCCATCAACTTCACTGGACAAGGAAAGCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: CSEGMKISVANINVE*SHVSINFTGQGKLP Trigger: TGGTAGCTTTCCTTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATTAGCTACAGAAATCTTCATTCCCTCAGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAGCTAATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAAGTAAAAAGTCTGCATaGAGTGCATTTTGTCCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: VANINVELSHVSINFTGQSKKSA*SAFCPS Trigger: CGAGGGACAAAATGCACTTCATGCAGACTTTTTACT...TTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATTAGCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTTGGAGTTGTACACTCTGACTTAAAGGTTTCAATACCTGCAAACCGAATCAAAGGTTTCAATACCTaGAAACCGAATCACTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: CVGVVHSDLKVSIPANRIKGFNT*KPNHWP Trigger: AGGCCAGTGATTCGGTTTGCAGGTATTGAAACCTTT...GATTCGGTTTGCAGGTATTGAAACCTTTAAGTCAGAGTGTACAACTCCAACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGGAATTTTCTTTTTCTGTaGCTGTCCGCTGTAAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KLFLFRDIYFHLVLLQAGNFLFL*LSAVKA Trigger: AGCCTTTACAGCGGACAGGCACAGAAAAAGAAAATT...CCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCTTTGTTGTTCTGCATAAAATTTAGACCTGTGTTGTGCAAGAGAACCCTACAGGTGCAAGCACAGTaGCTTGGGAAGTTTTTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TALLFCIKFRPVLCKRTLQVQAQ*LGKFLN Trigger: ATTCAAAAACTTCCCAAGGCACTGTGCTTGCACCTG...TAGGGTTCTCTTGCACAACACAGGTCTAAATTTTATGCAGAACAACAAAGCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGCTAATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAACCAGAGACAAGAAATaGAGCAGTTCTGGAACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: VANINVELSHVSINFTGQTRDKK*SSSGTL Trigger: TAGAGTTCCAGAACTGCTCCATTTCTTGTCTCTGGT...TTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATTAGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTACTGATCCAGAATGTAATTTCTGTTCTGAGGGAATGAAGATTTCTGTAGCTGCAAATGTGCCTCGGTaGGAACTGAAAACATTAATA | + |
|
Preference number: 2 (lower is better) Translates to: GTDPECNFCSEGMKISVAANVPR*ELKTLI Trigger: TATTAATGTTTTCAGTTCTCACCGAGGCACATTTGC...AGCTACAGAAATCTTCATTCCCTCAGAACAGAAATTACATTCTGGATCAGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR CAA 90 bp | CTGAAATTTGACTCTTGGATCAAGTATTTATGGAAAATGGAAATGTaGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTATTACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LKFDSWIKYLWKMEM*SGVVDDSWSGGITV Trigger: AACTGTAATACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAAATACTTGATCCAAGAGTCAAATTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | CCACTCTCCCCACAGAGCGGCCCAGTCTGCTGCTGCTaGTCCACCTGGCTTGACAGTGCCAGCTCTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLSPQSGPVCCC*STWLDSASSVC Trigger: GCACACAGAGCTGGCACTGTCAAGCCAGGTGGAGCAGCAGCAGCAGACTGGGCCGCTCTGTGGGGAGAGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | GCTGGAACTAAAGGCGAGCGCCACCACTGCCCGGCTTaGTCTGCCTGGAAACAATCCACAGAAGAGCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AGTKGERHHCPA*SAWKQSTEEPS Trigger: GCTGGGCTCTTCTGTGGATTGTTTCCAGGCAGAGCAAGCCGGGCAGTGGTGGCGCTCGCCTTTAGTTCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR GCA 72 bp | CTGAGCAGTCACTGTGAAACCGGTGGGCCACAGACCTaGACACACGATCCTCACGATGGAGTCGCTGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSSHCETGGPQT*THDPHDGVADL Trigger: CAGGTCAGCGACTCCATCGTGAGGATCGTGTGTGCAGGTCTGTGGCCCACCGGTTTCACAGTGACTGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | GGTCTGCAGTCGGAAGGAATTCCTGAGCAGTCACTGTaGAACCGGTGGGCCACAGACCTGCACACACGATCC | + |
|
Preference number: 3 (lower is better) Translates to: GLQSEGIPEQSL*NRWATDLHTRS Trigger: GGATCGTGTGTGCAGGTCTGTGGCCCACCGGTTTCACAGTGACTGCTCAGGAATTCCTTCCGACTGCAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | GTGTGGGAGGACTTGGAGTTTCCTGTTGCCATGGGCTaGCAGGACAGGATATGCATGAGGCCCTGCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VWEDLEFPVAMG*QDRICMRPCLS Trigger: GCTGAGGCAGGGCCTCATGCATATCCTGTCCTGTCAGCCCATGGCAACAGGAAACTCCAAGTCCTCCCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | GGGCTACTGCCCAGTGGTGACAGTCACACACACATGTaGCTCCTCTTTCCTGTGCTGTGGCATCTTCTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLLPSGDSHTHM*LLFPVLWHLLG Trigger: CCCGAGAAGATGCCACAGCACAGGAAAGAGGAGGCACATGTGTGTGTGACTGTCACCACTGGGCAGTAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR GCA 72 bp | CTCCTGAGTGCTGGAACTAAAGGCGAGCGCCACCACTaGCCGGCTTGCTCTGCCTGGAAACAATCCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLSAGTKGERHH*PACSAWKQSTE Trigger: TTCTGTGGATTGTTTCCAGGCAGAGCAAGCCGGGCAGTGGTGGCGCTCGCCTTTAGTTCCAGCACTCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCTGAGTGCTGGAACTAAAGGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLLSAGTKGE Trigger: CTCGCCTTTAGTTCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR TCA 72 bp | ATGGCCACCACTCCCTTGAGGGCTACTGCCCAGTGGTaGCAGTCACACACACATGTGCCTCCTCTTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: MATTPLRATAQW*QSHTHVPPLSC Trigger: ACAGGAAAGAGGAGGCACATGTGTGTGTGACTGTCACCACTGGGCAGTAGCCCTCAAGGGAGTGGTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR GCA 72 bp | GCAACCCTGAGACACAGCAGTGGTGACGGCCTGGTCTaGAGTCGGAAGGAATTCCTGAGCAGTCACTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ATLRHSSGDGLV*SRKEFLSSHCE Trigger: TTCACAGTGACTGCTCAGGAATTCCTTCCGACTGCAGACCAGGCCGTCACCACTGCTGTGTCTCAGGGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | GTGACAGTCACACACACATGTGCCTCCTCTTTCCTGTaGTGTGGCATCTTCTCGGGGCTGTCAGAAGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: VTVTHTCASSFL*CGIFSGLSEDP Trigger: TGGGTCTTCTGACAGCCCCGAGAAGATGCCACAGCACAGGAAAGAGGAGGCACATGTGTGTGTGACTGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CCA 72 bp | AGTCACACACACATGTGCCTCCTCTTTCCTGTGCTGTaGCATCTTCTCGGGGCTGTCAGAAGACCCATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SHTHMCLLFPVL*HLLGAVRRPML Trigger: GAGCATGGGTCTTCTGACAGCCCCGAGAAGATGCCACAGCACAGGAAAGAGGAGGCACATGTGTGTGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR TCA 72 bp | TTCCTGTTGCCATGGGCTGACAGGACAGGATATGCATaGGGCCCTGCCTCAGCATACGCTCTGAGCAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FLLPWADRTGYA*GPASAYALSKS Trigger: ACTTTTGCTCAGAGCGTATGCTGAGGCAGGGCCTCATGCATATCCTGTCCTGTCAGCCCATGGCAACAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | CCTGGGCAAGAGGTGACTTCAGCAGTTGGAGGACCATaGGAGAGTTTAGGGGACGGTAGAGGTTACAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGQEVTSAVGGP*ESLGDGRGYNG Trigger: CCCATTGTAACCTCTACCGTCCCCTAAACTCTCTCATGGTCCTCCAACTGCTGAAGTCACCTCTTGCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR GCA 72 bp | TGCTGCTCCACCTGGCTTGACAGTGCCAGCTCTGTGTaGGTACTGTGTAAGTCATTACAGTTGCCCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CCSTWLDSASSV*VLCKSLQLPSQ Trigger: CTGACTGGGCAACTGTAATGACTTACACAGTACGCACACAGAGCTGGCACTGTCAAGCCAGGTGGAGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR CCA 72 bp | ACTCCCCTTTCCTCCTGCCCATGTAGGCTACAAGACTaGCCCCTGATGGCTGTTGCTCTGCCATTTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TPLSSCPCRLQD*PLMAVALPFLL Trigger: AAGAAGAAATGGCAGAGCAACAGCCATCAGGGGCCAGTCTTGTAGCCTACATGGGCAGGAGGAAAGGGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CCA 72 bp | CGGGTGTCAGGATCCAGACTTACTCGAAGCCATCTGTaGTTCGGCTTATGTTCAGAGGGCCTGAAAGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RVSGSRLTRSHL*FGLCSEGLKVL Trigger: CAGGACTTTCAGGCCCTCTGAACATAAGCCGAACCACAGATGGCTTCGAGTAAGTCTGGATCCTGACACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR GCA 72 bp | TGGGTTTCAATGCTTGCACACAGCCCCCAGCTGCCCTaGTTTTTAGGAAGCTGTGCTGCAGATCTGGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WVSMLAHSPQLP*FLGSCAADLEV Trigger: TACTTCCAGATCTGCAGCACAGCTTCCTAAAAAGCAGGGCAGCTGGGGGCTGTGTGCAAGCATTGAAACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CCA 72 bp | ACAAACTGTTTCTATCCCCACCTGTGTGGGAGGACTTaGAGTTTCCTGTTGCCATGGGCTGACAGGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TNCFYPHLCGRT*SFLLPWADRTG Trigger: TCCTGTCCTGTCAGCCCATGGCAACAGGAAACTCCAAGTCCTCCCACACAGGTGGGGATAGAAACAGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGGTGCTGCTCCACCTGGCTaGACAGTGCCAGCTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: FRWALHMGAVTFSKSLHGAAPPG*TVPALC Trigger: ACACAGAGCTGGCACTGTCAAGCCAGGTGGAGCAGC...ACCATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACTTGTGTTGCCACAAACTGTTTCTATCCCCACCTGTGTGGGAGGACTTGACTGGCCTCCAGCATTaGCCACTAGCTGCCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RDLCCHKLFLSPPVWEDLTGLQH*PLAAFF Trigger: AAAGAAGGCAGCTAGTGGCAAATGCTGGAGGCCAGT...CAAGTCCTCCCACACAGGTGGGGATAGAAACAGTTTGTGGCAACACAAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | TGTCAGAAGACCCATGCTCTGGAAACAGTTCCTACCTaGGCCTTTCCAAAGCCTGGGCAAGAGGTGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CQKTHALETVPT*AFPKPGQEVTS Trigger: TGAAGTCACCTCTTGCCCAGGCTTTGGAAAGGCTCAGGTAGGAACTGTTTCCAGAGCATGGGTCTTCTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR TCA 72 bp | CTTCCTGGGCTTGCAGCCTTTCTCCTAGCAGGACAGTaGGTATTAGCTGTTAGGTATCAGAGTGTGTCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LPGLAAFLLAGQ*VLAVRYQSVSV Trigger: CACCGACACACTCTGATACCTAACAGCTAATACTCACTGTCCTGCTAGGAGAAAGGCTGCAAGCCCAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR GCA 72 bp | GCTGTTAGGTATCAGAGTGTGTCGGTGCGGCTCCTCTaGTCACCCTTGCTAGGAAGAGGTCATTTTTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: AVRYQSVSVRLL*SPLLGRGHFYH Trigger: ATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGCACCGACACACTCTGATACCTAACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CCA 72 bp | AGCAGTTCTGGAACTCTAGCACAGGTGCAACGGGACTaGCAGAGTTATTTAATGCTGAGGCACAGCAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSGTLAQVQRD*QSYLMLRHSNP Trigger: AGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTCCCGTTGCACCTGTGCTAGAGTTCCAGAACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGGTGCGGCTCCTCTGCTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCAAATTTAGACCTGTGTaGTGCAAGAGAACCCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SVRLLCSPLLGRGHFYHAKFRPV*CKRTLW Trigger: CCATAGGGTTCTCTTGCACAACACAGGTCTAAATTT...GGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGCACCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATGGAGAGACTTGTGTTGCCACAAACTGTTTCTATCCCCACCTGTGTGGGAGCCACATATGAGGCAGTaGACCTCGTTCTGGAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: PWRDLCCHKLFLSPPVWEPHMRQ*TSFWRI Trigger: AATTCTCCAGAACGAGGTCAACTGCCTCATATGTGG...CTCCCACACAGGTGGGGATAGAAACAGTTTGTGGCAACACAAGTCTCTCCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | ATTGAAATGGAACCAGCGGCCTTCGTGAACTGCATATaGTGTGTAATGTCCAGAACCAACCCCAGAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: IEMEPAAFVNCI*CVMSRTNPRAM Trigger: CATGGCTCTGGGGTTGGTTCTGGACATTACACAGCATATGCAGTTCACGAAGGCCGCTGGTTCCATTTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | GCTGTCATTGAAATGGAACCAGCGGCCTTCGTGAACTaGATATGCTGTGTAATGTCCAGAACCAACCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: AVIEMEPAAFVN*ICCVMSRTNPR Trigger: TCTGGGGTTGGTTCTGGACATTACACAGCATATGCAGTTCACGAAGGCCGCTGGTTCCATTTCAATGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR CCA 72 bp | TTTTCATTGGAGGTAATTAGCGACAACAGCCCTTCCTaGGCTTGCAGCCTTTCTCCTAGCAGGACAGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FSLEVISDNSPS*ACSLSPSRTVS Trigger: ACTCACTGTCCTGCTAGGAGAAAGGCTGCAAGCCCAGGAAGGGCTGTTGTCGCTAATTACCTCCAATGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CCA 72 bp | ACTAAAGACACATTGCTGTCCCCTTGGCTCCTGGTGTaGTATGTTCGCCTTCCTGCTGTTTTCCCATTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TKDTLLSPWLLV*YVRLPAVFPFL Trigger: AAGGAATGGGAAAACAGCAGGAAGGCGAACATACCACACCAGGAGCCAAGGGGACAGCAATGTGTCTTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR CCA 72 bp | CTTCTACTAAAGACACATTGCTGTCCCCTTGGCTCCTaGTGTGGTATGTTCGCCTTCCTGCTGTTTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLKTHCCPLGS*CGMFAFLLFSH Trigger: ATGGGAAAACAGCAGGAAGGCGAACATACCACACCAGGAGCCAAGGGGACAGCAATGTGTCTTTAGTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGACTGGCCTCCAGCATTaGCCACTAGCTGCCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CSDGHCIWVQSLSQRVFMTGLQH*PLAAFF Trigger: AAAGAAGGCAGCTAGTGGCAAATGCTGGAGGCCAGT...CATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | CAGATCCACCCACAGGACATACCTCTACCATGCAGCTaGATCGCAGGGCTTTTAAACACGTATTTGCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: QIHPQDIPLPCS*IAGLLNTYLHL Trigger: CAAGTGCAAATACGTGTTTAAAAGCCCTGCGATTCAGCTGCATGGTAGAGGTATGTCCTGTGGGTGGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR CCA 72 bp | TTAAAAGAAGACCAGAGACAAGAAATGGAGCAGTTCTaGAACTCTAGCACAGGTGCAACGGGACTGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKEDQRQEMEQF*NSSTGATGLAE Trigger: CTCTGCCAGTCCCGTTGCACCTGTGCTAGAGTTCCAGAACTGCTCCATTTCTTGTCTCTGGTCTTCTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR CCA 72 bp | CTAAACTCTTCTACTAAAGACACATTGCTGTCCCCTTaGCTCCTGGTGTGGTATGTTCGCCTTCCTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LNSSTKDTLLSP*LLVWYVRLPAV Trigger: AACAGCAGGAAGGCGAACATACCACACCAGGAGCCAAGGGGACAGCAATGTGTCTTTAGTAGAAGAGTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR CCA 72 bp | TGGTCAGGAGGTATTACAGTTTTTCTGCTCCAGCTCTaGCCTGACGCTCCACATAAAACAGAATGTAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WSGGITVFLLQL*PDAPHKTECRP Trigger: AGGCCTACATTCTGTTTTATGTGGAGCGTCAGGCCAGAGCTGGAGCAGAAAAACTGTAATACCTCCTGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | CATATGCTGTGTAATGTCCAGAACCAACCCCAGAGCCATGGTGTACAACCACAGGCCTCTCAGTGGGAATaGAACGTATGTATCGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: HMLCNVQNQPQSHGVQPQASQWE*NVCIDF Trigger: AAAGTCGATACATACGTTCAATTCCCACTGAGAGGC...CTGTGGTTGTACACCATGGCTCTGGGGTTGGTTCTGGACATTACACAGCATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGGTTTGTATGCCAAAGTGTaGCCTAATGACCACTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FRWALHMGAVTFSKSLHGLYAKV*PNDHSP Trigger: GGGAGAGTGGTCATTAGGCAACACTTTGGCATACAA...ACCATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAACAGCCCTTCCTGGGCTTGCAGCCTTTCTCCTAGCAGGACAGTGAGTATTTTTTTCGTGGGTGATTaGCAGAGTTTCATTATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DNSPSWACSLSPSRTVSIFFVGD*QSFIIC Trigger: ACAGATAATGAAACTCTGCAAATCACCCACGAAAAA...AATACTCACTGTCCTGCTAGGAGAAAGGCTGCAAGCCCAGGAAGGGCTGTTGTC 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGACCAGAGACAAGAAATGGAGCAGTTCTGGAACTCTAGCACAGGTGCAACGGTTCATGAAACAAGTGTaGCCCAAATTTCGAAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KTRDKKWSSSGTLAQVQRFMKQV*PKFRRP Trigger: AGGCCTTCGAAATTTGGGCAACACTTGTTTCATGAA...CCGTTGCACCTGTGCTAGAGTTCCAGAACTGCTCCATTTCTTGTCTCTGGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGGTACTTGCCCTGCACTGTCCTGTACCCAGCCCTGACATAACTAGTGTGTGCCTTGGGAAGTTTTaGAATCCAAAACTTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GKVLALHCPVPSPDITSVCLGKF*NPKLLC Trigger: ACAAAGAAGTTTTGGATTCAAAAACTTCCCAAGGCA...CACACTAGTTATGTCAGGGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | CCAGCTCTGTGTGCGTACTGTGTAAGTCATTACAGTTaGCCAGTCAGAGGCAAAGATATAAATGCCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PALCAYCVSHYS*PVRGKDINARG Trigger: TCCTCTGGCATTTATATCTTTGCCTCTGACTGGGCAACTGTAATGACTTACACAGTACGCACACAGAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | TTCATCATGGGTGTTCAGATGGGCACTGCATATGGGTaGAGTCACTTTCTCAAAGAGTCTTCATGGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FIMGVQMGTAYG*SHFLKESSWCH Trigger: GTGACACCATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACACCCATGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | TTGATGACTCATGGTCAGGAGGTATTACAGTTTTTCTaGTCCAGCTCTGGCCTGACGCTCCACATAAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LMTHGQEVLQFF*SSSGLTLHIKQ Trigger: CTGTTTTATGTGGAGCGTCAGGCCAGAGCTGGAGCAGAAAAACTGTAATACCTCCTGACCATGAGTCATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR CCA 72 bp | GTACTTCATCATGGGTGTTCAGATGGGCACTGCATATaGGTGCAGTCACTTTCTCAAAGAGTCTTCATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLHHGCSDGHCI*VQSLSQRVFMV Trigger: CACCATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACACCCATGATGAAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACTCAGCACACTTCCTCCTTTTAAACACGTATTaGCACTTGTCAGTGTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SRTRAAHASTSWNSAHFLLLNTY*HLSVFL Trigger: TAGGAACACTGACAAGTGCAAATACGTGTTTAAAAG...GAGGAAGTGTGCTGAGTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCACCTGGTTCTGCTTCAGGCAGGGAGTGAATTAAAACCCAGAGCTTCTATGAATTCTCCTGTAGAATaGCTGAGCGGGAAACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: FHLVLLQAGSELKPRASMNSPVE*LSGKHH Trigger: ATGGTGTTTCCCGCTCAGCAATTCTACAGGAGAATT...CATAGAAGCTCTGGGTTTTAATTCACTCCCTGCCTGAAGCAGAACCAGGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | GAGCCTGGATTAGTGGGAGCTGTGTGCAACGTTAGATaGGACTCATTTAGGCTTAGCTGTGATGTTATCACA | + |
|
Preference number: 3 (lower is better) Translates to: EPGLVGAVCNVR*DSFRLSCDVIT Trigger: TGTGATAACATCACAGCTAAGCCTAAATGAGTCTCATCTAACGTTGCACACAGCTCCCACTAATCCAGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | GCTAGGAAGAGGTCATTTTTACCATGCCCCAAACTGTaGGTGGAATCTGAGGATCATGCTTGGTACTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ARKRSFLPCPKL*VESEDHAWYFS Trigger: GCTAAAGTACCAAGCATGATCCTCAGATTCCACTCACAGTTTGGGGCATGGTAAAAATGACCTCTTCCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CCA 72 bp | GGAAGAGGTCATTTTTACCATGCCCCAAACTGTGAGTaGAATCTGAGGATCATGCTTGGTACTTTAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRGHFYHAPNCE*NLRIMLGTLAQ Trigger: CTGAGCTAAAGTACCAAGCATGATCCTCAGATTCCACTCACAGTTTGGGGCATGGTAAAAATGACCTCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CCA 72 bp | GACTCTGTCCCACATATGAGGCAGTTGACCTCGTTCTaGAGAATTCCTCCAAATATTGCTGTGACAACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: DSVPHMRQLTSF*RIPPNIAVTTV Trigger: AACTGTTGTCACAGCAATATTTGGAGGAATTCTCCAGAACGAGGTCAACTGCCTCATATGTGGGACAGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | CATATACTTTCACCTGGTTCTGCTTCAGGCAGGGAGTaGATTAAAACCCAGAGCTTCTATGACTCCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HILSPGSASGRE*IKTQSFYDSTS Trigger: AGAAGTGGAGTCATAGAAGCTCTGGGTTTTAATTCACTCCCTGCCTGAAGCAGAACCAGGTGAAAGTATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | TGGATGTGGAACAGGCTGTGTTGGAGTTGTACACTCTaGCTTAAAGGTTTCAATACCTGCAAACCGAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: WMWNRLCWSCTL*LKGFNTCKPNH Trigger: GTGATTCGGTTTGCAGGTATTGAAACCTTTAAGTCAGAGTGTACAACTCCAACACAGCCTGTTCCACATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | TGCTTTTTAGGAAGCTGTGCTGCAGATCTGGAAGTATaGAGCTGCTCTAAGTGCATACAACTTGGTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CFLGSCAADLEV*SCSKCIQLGGN Trigger: GTTTCCACCAAGTTGTATGCACTTAGAGCAGCTTCATACTTCCAGATCTGCAGCACAGCTTCCTAAAAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR TCA 72 bp | TATACAACTCTGTCTCATCAAGTTCCTCTAGGTCAGTaGAGCTGCGAAGGCAATCTCTTAAGGAGCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: YTTLSHQVPLGQ*SCEGNLLRSKL Trigger: CAGTTTGCTCCTTAAGAGATTGCCTTCGCAGCTTCACTGACCTAGAGGAACTTGATGAGACAGAGTTGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | AGGGCCAGCGCATATGACTGGTTTAATTACATCATCTaGCACTACACACTGAGTAGAATACAGTGGATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RASAYDWFNYII*HYTLSRIQWIS Trigger: GCTTATCCACTGTATTCTACTCAGTGTGTAGTGGCAGATGATGTAATTAAACCAGTCATATGCGCTGGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR TCA 72 bp | AGAGGGCCTGAAAGTCCTGGCAGAAGAGCAGCCCATTaGAGTTACAAGTTTTCCTTAAAAGGGATTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RGPESPGRRAAH*SYKFSLKGISF Trigger: AAAAGAAATCCCTTTTAAGGAAAACTTGTAACTTCAATGGGCTGCTCTTCTGCCAGGACTTTCAGGCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR GCA 72 bp | GCTTTGTTGTTCTGCATAAAATTTAGACCTGTGTTGTaGAAGAGAACCCTATGGAAAGGTACTTGCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALLFCIKFRPVL*KRTLWKGTCPA Trigger: TGCAGGGCAAGTACCTTTCCATAGGGTTCTCTTGCACAACACAGGTCTAAATTTTATGCAGAACAACAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | ACAGACTGGTGCATGTGTTCTTTTTCGTGGGTGATTTaGAGAGTTTCATTATCTGTCCTAGATAGCATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TDWCMCSFSWVI*RVSLSVLDSIP Trigger: GGGAATGCTATCTAGGACAGATAATGAAACTCTGCAAATCACCCACGAAAAAGAACACATGCACCAGTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CCA 72 bp | CTAGATTTAAAACAAATAGGCACATGTACTTCATCATaGGTGTTCAGATGGGCACTGCATATGGGTGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LDLKQIGTCTSS*VFRWALHMGAV Trigger: GACTGCACCCATATGCAGTGCCCATCTGAACACCCATGATGAAGTACATGTGCCTATTTGTTTTAAATCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR CCA 72 bp | TACATCATCTGCCACTACACACTGAGTAGAATACAGTaGATAAGCTTAGAGTTCTCCACCATGGAGAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: YIICHYTLSRIQ*ISLEFSTMERL Trigger: AAGTCTCTCCATGGTGGAGAACTCTAAGCTTATCCACTGTATTCTACTCAGTGTGTAGTGGCAGATGATGTA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR CCA 72 bp | GTGAGACAGACAGACTGGTGCATGTGTTCTTTTTCGTaGGTGATTTGCAGAGTTTCATTATCTGTCCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VRQTDWCMCSFS*VICRVSLSVLD Trigger: ATCTAGGACAGATAATGAAACTCTGCAAATCACCCACGAAAAAGAACACATGCACCAGTCTGTCTGTCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CCA 72 bp | AAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATaGTCAGGAGGTATTACAGTTTTTCTGCTCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KMEMLSGVVDDS*SGGITVFLLQL Trigger: GAGCTGGAGCAGAAAAACTGTAATACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | TATGTATCGACTTTGTTTCTTAAATATGCTGTCCAGTaGAACCTTTTCAGGTGCAAGCACAGTGCCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YVSTLFLKYAVQ*NLFRCKHSALG Trigger: TCCCAAGGCACTGTGCTTGCACCTGAAAAGGTTTCACTGGACAGCATATTTAAGAAACAAAGTCGATACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | CTGGAGAATTCCTCCAAATATTGCTGTGACAACAGTTaGTGCTCCATTTATGCAGCATTTGTTACTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LENSSKYCCDNS*CSIYAAFVTCR Trigger: TCTGCAAGTAACAAATGCTGCATAAATGGAGCATCAACTGTTGTCACAGCAATATTTGGAGGAATTCTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| 3UTR GCA 72 bp | GTTGTAGTGCTTACACATGTCACAGCTTTGTTGTTCTaGATAAAATTTAGACCTGTGTTGTGCAAGAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: VVVLTHVTALLF*IKFRPVLCKRT Trigger: GGTTCTCTTGCACAACACAGGTCTAAATTTTATGCAGAACAACAAAGCTGTGACATGTGTAAGCACTACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGCTTTTAAACACGTATTaGCACTTGTCAGTGTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KNYSCSETYTFTWFCFRQLLNTY*HLSVFL Trigger: TAGGAACACTGACAAGTGCAAATACGTGTTTAAAAG...CTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR TCA 72 bp | AACCAAGCAATAAAGCTGCTACAAAAATTCCAGAGATaGTTCATTCCCTTGTATGCCAAAGTGTTGCCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: NQAIKLLQKFQR*FIPLYAKVLPN Trigger: ATTAGGCAACACTTTGGCATACAAGGGAATGAATCATCTCTGGAATTTTTGTAGCAGCTTTATTGCTTGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCAACGGGACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGTGGACCTGCACACGCTaGAGCACCAGGACGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVQRDWQSYLMLRHSNPEWTCTR*STRTTG Trigger: CCCCGTCGTCCTGGTGCTGCAGCGTGTGCAGGTCCA...CTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTCCCGTTGCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | GCGGCTCCTCTGCTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCCCAAATGGACCTGCACACGCTaGAGCACCAGGACGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAPLLTLARKRSFLPCPKWTCTR*STRTTG Trigger: CCCCGTCGTCCTGGTGCTGCAGCGTGTGCAGGTCCA...TTTGGGGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAACCACAGCAGCGAGGTCATACAGGCAACTGTCTGGACCACTGTTCTCCAGCCGTTGGGGAACTTaGCTGAGTCCGGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CTTTAARSYRQLSGPLFSSRWGT*LSPGRC Trigger: GCATCGCCCCGGACTCAGCCAAGTTCCCCAACGGCT...GGAGAACAGTGGTCCAGACAGTTGCCTGTATGACCTCGCTGCTGTGGTTGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| CDS-3UTR TCA 90 bp | AAGACCAGAGACAAGAAATGGAGCAGTTCTGGAACTCTAGCACAGGTGCAACGGGTTGGGGAACTTGGCTaGGTCCGGGGCGATGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTRDKKWSSSGTLAQVQRVGELG*VRGDAD Trigger: GTCTGCATCGCCCCGGACTCAGCCAAGTTCCCCAAC...CCGTTGCACCTGTGCTAGAGTTCCAGAACTGCTCCATTTCTTGTCTCTGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCTTTTAAACACGTATTTGCACTTGTCAGTGTTCCTAGCCTGTCTGCCCAGCCGTTGGGGAACTTaGCTGAGTCCGGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLLNTYLHLSVFLACLPSRWGT*LSPGRC Trigger: GCATCGCCCCGGACTCAGCCAAGTTCCCCAACGGCT...GGGCAGACAGGCTAGGAACACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCTTTTAAACACGTATTTGCACTTGTCAGTGTTCCTAGCCTGTCTGCCCACGACGGGGAGCCGTTaGGGAACTTGGCTGAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGLLNTYLHLSVFLACLPTTGSR*GTWLSP Trigger: CGGACTCAGCCAAGTTCCCCAACGGCTCCCCGTCGT...GGGCAGACAGGCTAGGAACACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR CCA 90 bp | GCGGCTCCTCTGCTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCCCAAACCAACCCCAGAGCCATaGTGTACAACCACAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AAPLLTLARKRSFLPCPKPTPEP*CTTTAA Trigger: CGCTGCTGTGGTTGTACACCATGGCTCTGGGGTTGG...TTTGGGGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | TCGGTGCGGCTCCTCTGCTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCTGTCCCCTTGGCTCCTaGTGTGGTATGTTCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVRLLCSPLLGRGHFYHACPLGS*CGMFAF Trigger: GAAGGCGAACATACCACACCAGGAGCCAAGGGGACA...GGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGCACCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCCTGAGCAGTCACTGTGAAACCGGTGGGCCACAGACCTGCACACACGATCCAGCTTGGTGTCGTTaGCCACAAAATCGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EFLSSHCETGGPQTCTHDPAWCR*PQNRHS Trigger: GCTGTGACGATTTTGTGGTCAACGACACCAAGCTGG...ATCGTGTGTGCAGGTCTGTGGCCCACCGGTTTCACAGTGACTGCTCAGGAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR CCA 90 bp | GACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGACACAGCAGTGGCCAACCCCAGAGCCATaGTGTACAACCACAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DWQSYLMLRHSNPETQQWPTPEP*CTTTAA Trigger: CGCTGCTGTGGTTGTACACCATGGCTCTGGGGTTGG...CCACTGCTGTGTCTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGGTTGGGGAACTTGGCTaGGTCCGGGGCGATGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSDGHCIWVQSLSQRVFMVGELG*VRGDAD Trigger: GTCTGCATCGCCCCGGACTCAGCCAAGTTCCCCAAC...CATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCCTGAGCAGTCACTGTGAAACCGGTGGGCCACAGACCTGCACACACGATCCAAAAGGTAGCGCATaGATTCATGGGCATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EFLSSHCETGGPQTCTHDPKGSA*IHGHPA Trigger: AGCAGGATGCCCATGAATTCATGCGCTACCTTTTGG...ATCGTGTGTGCAGGTCTGTGGCCCACCGGTTTCACAGTGACTGCTCAGGAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| 3UTR CAA 72 bp | TATCAGAGTGTGTCGGTGCGGCTCCTCTGCTCACCCTaGCTAGGAAGAGGTCATTTTTACCATGCCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YQSVSVRLLCSP*LGRGHFYHAPN Trigger: GTTTGGGGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGCACCGACACACTCTGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGAACCCCTTAATGACTACTCCCCTTTCCTCCTGCCCATGTAGGCTACAACCAGCTTGGTGTCGTTaGCCACAAAATCGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQNPLMTTPLSSCPCRLQPAWCR*PQNRHS Trigger: GCTGTGACGATTTTGTGGTCAACGACACCAAGCTGG...TTGTAGCCTACATGGGCAGGAGGAAAGGGGAGTAGTCATTAAGGGGTTCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | GCGGCTCCTCTGCTCACCCTTGCTAGGAAGAGGTCATTTTTACCATGCCCCAAAAGCGGGAAACACCATTaGAGCCACCCTGAAGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AAPLLTLARKRSFLPCPKSGKHH*SHPEVL Trigger: TAGAACTTCAGGGTGGCTTCAATGGTGTTTCCCGCT...TTTGGGGCATGGTAAAAATGACCTCTTCCTAGCAAGGGTGAGCAGAGGAGCCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTTGGACCTGCACACGCTaGAGCACCAGGACGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGWTCTR*STRTTG Trigger: CCCCGTCGTCCTGGTGCTGCAGCGTGTGCAGGTCCA...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGAGTTCTCCACCATGGAGAGACTTGTGTTGCCACAAACTGTTTCTATCCCCCCAGGGGCTTTTGTTaGACCTGCACACGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVLHHGETCVATNCFYPPRGFC*TCTRCS Trigger: GCTGCAGCGTGTGCAGGTCCAACAAAAGCCCCTGGG...GGGATAGAAACAGTTTGTGGCAACACAAGTCTCTCCATGGTGGAGAACTCTAAG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCAACGGGACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGACATTGCTGTCCCCTTaGCTCCTGGTGTGGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVQRDWQSYLMLRHSNPETLLSP*LLVWYV Trigger: AACATACCACACCAGGAGCCAAGGGGACAGCAATGT...CTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTCCCGTTGCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | GACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGACACAGCAGTGGTCACAGTGCTGTCATTaGAATGGAACCAGCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DWQSYLMLRHSNPETQQWSQCCH*NGTSGL Trigger: AAGGCCGCTGGTTCCATTTCAATGACAGCACTGTGA...CCACTGCTGTGTCTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCTTTTAAACACGTATTTGCACTTGTCAGTGTTCCTAGCCTGTCTGCCCGCAGTCTGGCTGCCTTaGCATAAAGCACACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLLNTYLHLSVFLACLPAVWLP*HKAHSV Trigger: GACACTGTGTGCTTTATGGCAAGGCAGCCAGACTGC...GGGCAGACAGGCTAGGAACACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAGTTGGGGAACTTGGCTaGGTCCGGGGCGATGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIEVGELG*VRGDAD Trigger: GTCTGCATCGCCCCGGACTCAGCCAAGTTCCCCAAC...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTGCAACGGGACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGTGCTGTGACAACAGTTaGTGCTCCATTTATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVQRDWQSYLMLRHSNPECCDNS*CSIYAA Trigger: TGCTGCATAAATGGAGCATCAACTGTTGTCACAGCA...CTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTCCCGTTGCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGGAGTGAATTAAAACCCAGAGCTTCTATGACTCCACTTCTGCCTGGAGCGGCCTTCGTGAACTaGATATGCTGTGTAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAGSELKPRASMTPLLPGAAFVN*ICCVMS Trigger: GGACATTACACAGCATATGCAGTTCACGAAGGCCGC...TCCAGGCAGAAGTGGAGTCATAGAAGCTCTGGGTTTTAATTCACTCCCTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCTTTTAAACACGTATTTGCACTTGTCAGTGTTCCTAGCCTGTCTGCCCGCGGCCTTCGTGAACTaGATATGCTGTGTAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGLLNTYLHLSVFLACLPAAFVN*ICCVMS Trigger: GGACATTACACAGCATATGCAGTTCACGAAGGCCGC...GGGCAGACAGGCTAGGAACACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAAGAGCCGTTGGGGAACTTaGCTGAGTCCGGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLPLTKLNPKLEIEKSRWGT*LSPGRC Trigger: GCATCGCCCCGGACTCAGCCAAGTTCCCCAACGGCT...CTTTTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAGCCGTTGGGGAACTTaGCTGAGTCCGGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIESRWGT*LSPGRC Trigger: GCATCGCCCCGGACTCAGCCAAGTTCCCCAACGGCT...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | AAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGGCCCAGGGGCTTTTGTTaGACCTGCACACGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLFLFRDIYFHLVLLQAGPRGFC*TCTRCS Trigger: GCTGCAGCGTGTGCAGGTCCAACAAAAGCCCCTGGG...CCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | AAGACCAGAGACAAGAAATGGAGCAGTTCTGGAACTCTAGCACAGGTGCAACGGTTTCTGCTCCAGCTCTaGCCTGACGCTCCACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTRDKKWSSSGTLAQVQRFLLQL*PDAPHK Trigger: TTTATGTGGAGCGTCAGGCCAGAGCTGGAGCAGAAA...CCGTTGCACCTGTGCTAGAGTTCCAGAACTGCTCCATTTCTTGTCTCTGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCATTACAGTTGCCCAGTCAGAGGCAAAGATATAAATGCCAGAGGAGCCTGCCTTGGCTCCTGGTGTaGTATGTTCGCCTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLQLPSQRQRYKCQRSLPWLLV*YVRLPA Trigger: AGCAGGAAGGCGAACATACCACACCAGGAGCCAAGG...CAGGCTCCTCTGGCATTTATATCTTTGCCTCTGACTGGGCAACTGTAATGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGTTGGGGAACTTGGCTaGGTCCGGGGCGATGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KNYSCSETYTFTWFCFRQVGELG*VRGDAD Trigger: GTCTGCATCGCCCCGGACTCAGCCAAGTTCCCCAAC...CTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTGCAACGGGACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGCTCCAAATATTGCTGTaGCAACAGTTGATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVQRDWQSYLMLRHSNPELQILL*QQLMLH Trigger: ATGGAGCATCAACTGTTGTCACAGCAATATTTGGAG...CTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTCCCGTTGCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATGGTCAGACAGATCCACCCACAGGACATACCTCTACCATGCAGCTGAATACTGGCCCATTTTCCTaGTTCTTAGAGCGCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDGQTDPPTGHTSTMQLNTGPFS*FLERLL Trigger: AAGCAAGCGCTCTAAGAATCAGGAAAATGGGCCAGT...ATTCAGCTGCATGGTAGAGGTATGTCCTGTGGGTGGATCTGTCTGACCATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGTCTGATGGGTTTCAATGCTTGCACACAGCCCCCAGCTGCCCTGCTTTTTTTCGTGAACTGCATATaGTGTGTAATGTCCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: ASLMGFNACTQPPAALLFFVNCI*CVMSRT Trigger: GGTTCTGGACATTACACAGCATATGCAGTTCACGAA...AAAAAGCAGGGCAGCTGGGGGCTGTGTGCAAGCATTGAAACCCATCAGACTTGC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATGGTCAGACAGATCCACCCACAGGACATACCTCTACCATGCAGCTGAATAATTTCGAAGGCCTGTaGCACAAATGGCAGTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SDGQTDPPTGHTSTMQLNNFEGL*HKWQSY Trigger: GTACGACTGCCATTTGTGCCACAGGCCTTCGAAATT...ATTCAGCTGCATGGTAGAGGTATGTCCTGTGGGTGGATCTGTCTGACCATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | AAGACCAGAGACAAGAAATGGAGCAGTTCTGGAACTCTAGCACAGGTGCAACGGGGACTAAATGCAGTCTaGCTGCCTTGCCATAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTRDKKWSSSGTLAQVQRGLNAV*LPCHKA Trigger: TGCTTTATGGCAAGGCAGCCAGACTGCATTTAGTCC...CCGTTGCACCTGTGCTAGAGTTCCAGAACTGCTCCATTTCTTGTCTCTGGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTCCAACCCCAGAGCCATaGTGTACAACCACAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGPTPEP*CTTTAA Trigger: CGCTGCTGTGGTTGTACACCATGGCTCTGGGGTTGG...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| 3UTR CAA 72 bp | GCCAGCTCTGTGTGCGTACTGTGTAAGTCATTACAGTaGCCCAGTCAGAGGCAAAGATATAAATGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSVCVLCKSLQ*PSQRQRYKCQR Trigger: CCTCTGGCATTTATATCTTTGCCTCTGACTGGGCAACTGTAATGACTTACACAGTACGCACACAGAGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| 3UTR CAA 72 bp | AGCACAGGGCTCTTGGCTTTTACTAAGGTGTTTTCATaGGAGGTAATTAGCGACAACAGCCCTTCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: STGLLAFTKVFS*EVISDNSPSWA Trigger: AGCCCAGGAAGGGCTGTTGTCGCTAATTACCTCCAATGAAAACACCTTAGTAAAAGCCAAGAGCCCTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCATCTGTGGTTCGGCTTATGTTCAGAGGGCCTGAAAGTCCTGGCAGAAGAATACACACTGTATGCTaGGCTTTCTCCTGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSVVRLMFRGPESPGRRIHTVC*AFSCFS Trigger: AGAAAAGCAGGAGAAAGCTCAGCATACAGTGTGTAT...TCTTCTGCCAGGACTTTCAGGCCCTCTGAACATAAGCCGAACCACAGATGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | GACAACAGCCCTTCCTGGGCTTGCAGCCTTTCTCCTAGCAGGACAGTGAGTATTCTCAATGTTACTGAGTaGCTGAAGGATAGCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DNSPSWACSLSPSRTVSILNVTE*LKDSIH Trigger: ATGAATGCTATCCTTCAGTCACTCAGTAACATTGAG...AATACTCACTGTCCTGCTAGGAGAAAGGCTGCAAGCCCAGGAAGGGCTGTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | GACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGACACAGCAGTGGAGCGATAACAGTATGTaGTGTAGCTACTGCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: DWQSYLMLRHSNPETQQWSDNSM*CSYCNP Trigger: TGGATTGCAGTAGCTACAGCACATACTGTTATCGCT...CCACTGCTGTGTCTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGCTACTAAAGACACATTaGTGTCCCCTTGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSDGHCIWVQSLSQRVFMLLKTH*CPLGSW Trigger: CCAGGAGCCAAGGGGACAGCAATGTGTCTTTAGTAG...CATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGCTTTTAAACACGTATTTGCACTTGTCAGTGTTCCTAGCCTGTCTGCCCCTCCAAATATTGCTGTaGCAACAGTTGATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLLNTYLHLSVFLACLPLQILL*QQLMLH Trigger: ATGGAGCATCAACTGTTGTCACAGCAATATTTGGAG...GGGCAGACAGGCTAGGAACACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATGGTCAGACAGATCCACCCACAGGACATACCTCTACCATGCAGCTGAATAGCGATAACAGTATGTaGTGTAGCTACTGCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDGQTDPPTGHTSTMQLNSDNSM*CSYCNP Trigger: TGGATTGCAGTAGCTACAGCACATACTGTTATCGCT...ATTCAGCTGCATGGTAGAGGTATGTCCTGTGGGTGGATCTGTCTGACCATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | GACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGACACAGCAGTGGAATTTTCTTTTTCTGTaGCTGTCCGCTGTAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DWQSYLMLRHSNPETQQWNFLFL*LSAVKA Trigger: AGCCTTTACAGCGGACAGGCACAGAAAAAGAAAATT...CCACTGCTGTGTCTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | GACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGACACAGCAGTGGACATACCTTCCACAGTaGACACTTGAACAAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DWQSYLMLRHSNPETQQWTYLPQ*TLEQVK Trigger: TTTGACTTGTTCAAGTGTCCACTGTGGAAGGTATGT...CCACTGCTGTGTCTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGAGTTCTCCACCATGGAGAGACTTGTGTTGCCACAAACTGTTTCTATCCCGGCCTGTGGCACAAATaGCAGTCGTACTTCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LRVLHHGETCVATNCFYPGLWHK*QSYFHL Trigger: TAAATGGAAGTACGACTGCCATTTGTGCCACAGGCC...GGGATAGAAACAGTTTGTGGCAACACAAGTCTCTCCATGGTGGAGAACTCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGATGGGCACTGCATATGGGTGCAGTCACTTTCTCAAAGAGTCTTCATGGTCCAGGCCTCTCAGTaGGAATTGAACGTATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: CSDGHCIWVQSLSQRVFMVQASQ*ELNVCI Trigger: GATACATACGTTCAATTCCCACTGAGAGGCCTGGAC...CATGAAGACTCTTTGAGAAAGTGACTGCACCCATATGCAGTGCCCATCTGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAAGCCTTGGCTCCTGGTGTaGTATGTTCGCCTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLPLTKLNPKLEIEKPWLLV*YVRLPA Trigger: AGCAGGAAGGCGAACATACCACACCAGGAGCCAAGG...CTTTTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAATGTCCCCTTGGCTCCTaGTGTGGTATGTTCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIECPLGS*CGMFAF Trigger: GAAGGCGAACATACCACACCAGGAGCCAAGGGGACA...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| 3UTR CAA 72 bp | ATAAGCTTAGAGTTCTCCACCATGGAGAGACTTGTGTaGCCACAAACTGTTTCTATCCCCACCTGTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISLEFSTMERLV*PQTVSIPTCVG Trigger: TCCCACACAGGTGGGGATAGAAACAGTTTGTGGCAACACAAGTCTCTCCATGGTGGAGAACTCTAAGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR TCA 90 bp | AATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAGGAAAGCCAGCTTGGTGTCGTTaGCCACAAAATCGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NINVELSHVSINFTGQGKPAWCR*PQNRHS Trigger: GCTGTGACGATTTTGTGGTCAACGACACCAAGCTGG...CTTTCCTTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR TCA 90 bp | AAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGGAGCGGGAAACACCATTaGAGCCACCCTGAAGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KLFLFRDIYFHLVLLQAGSGKHH*SHPEVL Trigger: TAGAACTTCAGGGTGGCTTCAATGGTGTTTCCCGCT...CCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTTCACAGTGCTGTCATTaGAATGGAACCAGCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGSQCCH*NGTSGL Trigger: AAGGCCGCTGGTTCCATTTCAATGACAGCACTGTGA...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | TCTGATGGTCAGACAGATCCACCCACAGGACATACCTCTACCATGCAGCTGAATATGTGCTGTAGCTACTaGAATCCATACACACTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SDGQTDPPTGHTSTMQLNMCCSY*NPYTLY Trigger: ATACAGTGTGTATGGATTGCAGTAGCTACAGCACAT...ATTCAGCTGCATGGTAGAGGTATGTCCTGTGGGTGGATCTGTCTGACCATCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGGAGTGAATTAAAACCCAGAGCTTCTATGACTCCACTTCTGCCTGGAAATTTTCTTTTTCTGTaGCTGTCCGCTGTAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGSELKPRASMTPLLPGNFLFL*LSAVKA Trigger: AGCCTTTACAGCGGACAGGCACAGAAAAAGAAAATT...TCCAGGCAGAAGTGGAGTCATAGAAGCTCTGGGTTTTAATTCACTCCCTGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTTGGAGTTGTACACTCTGACTTAAAGGTTTCAATACCTGCAAACCGAATCGCAGTCTGGCTGCCTTaGCATAAAGCACACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVGVVHSDLKVSIPANRIAVWLP*HKAHSV Trigger: GACACTGTGTGCTTTATGGCAAGGCAGCCAGACTGC...GATTCGGTTTGCAGGTATTGAAACCTTTAAGTCAGAGTGTACAACTCCAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAAGGCAGTCTGGCTGCCTTaGCATAAAGCACACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLPLTKLNPKLEIEKAVWLP*HKAHSV Trigger: GACACTGTGTGCTTTATGGCAAGGCAGCCAGACTGC...CTTTTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAGGACTCAGGACTAAATaGAGTCTGGCTGCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIEGLRTK*SLAALP Trigger: TGGCAAGGCAGCCAGACTGCATTTAGTCCTGAGTCC...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | GACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGACACAGCAGTGGTTGATGCTCCATTTATaGAGCATTTGTTACTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DWQSYLMLRHSNPETQQWLMLHL*SICYLQ Trigger: CTGCAAGTAACAAATGCTGCATAAATGGAGCATCAA...CCACTGCTGTGTCTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGCCCAGGGGCTTTTGTTaGACCTGCACACGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWPRGFC*TCTRCS Trigger: GCTGCAGCGTGTGCAGGTCCAACAAAAGCCCCTGGG...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| 3UTR CAA 72 bp | TCAAACTTCCTCGACTCTGTCCCACATATGAGGCAGTaGACCTCGTTCTGGAGAATTCCTCCAAATATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNFLDSVPHMRQ*TSFWRIPPNIA Trigger: AGCAATATTTGGAGGAATTCTCCAGAACGAGGTCAACTGCCTCATATGTGGGACAGAGTCGAGGAAGTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| CDS-3UTR TCA 90 bp | AAAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGCCAAAAGGTAGCGCATaGATTCATGGGCATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTILVQRHILSPGSASGRPKGSA*IHGHPA Trigger: AGCAGGATGCCCATGAATTCATGCGCTACCTTTTGG...CCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAACCAAAAGGTAGCGCATaGATTCATGGGCATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIEPKGSA*IHGHPA Trigger: AGCAGGATGCCCATGAATTCATGCGCTACCTTTTGG...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAAGAGCGGGAAACACCATTaGAGCCACCCTGAAGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLPLTKLNPKLEIEKSGKHH*SHPEVL Trigger: TAGAACTTCAGGGTGGCTTCAATGGTGTTTCCCGCT...CTTTTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTTGGAGTTGTACACTCTGACTTAAAGGTTTCAATACCTGCAAACCGAATCTCACAGTGCTGTCATTaGAATGGAACCAGCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CVGVVHSDLKVSIPANRISQCCH*NGTSGL Trigger: AAGGCCGCTGGTTCCATTTCAATGACAGCACTGTGA...GATTCGGTTTGCAGGTATTGAAACCTTTAAGTCAGAGTGTACAACTCCAACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | AGAGACTTGTGTTGCCACAAACTGTTTCTATCCCCACCTGTGTGGGAGGACTTGATGTTACTGAGTGACTaGAGGATAGCATTCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDLCCHKLFLSPPVWEDLMLLSD*RIAFMK Trigger: TTTCATGAATGCTATCCTTCAGTCACTCAGTAACAT...CAAGTCCTCCCACACAGGTGGGGATAGAAACAGTTTGTGGCAACACAAGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAGCGGCCTTCGTGAACTaGATATGCTGTGTAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIEAAFVN*ICCVMS Trigger: GGACATTACACAGCATATGCAGTTCACGAAGGCCGC...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACTCAGCACACTTCCTCTTTTCTGATCTCTTATaGTTGAGTAAGGGTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRTRAAHASTSWNSAHFLFSDLL*LSKGIC Trigger: ACAGATACCCTTACTCAACCATAAGAGATCAGAAAA...GAGGAAGTGTGCTGAGTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTAATTTCGAAGGCCTGTaGCACAAATGGCAGTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGNFEGL*HKWQSY Trigger: GTACGACTGCCATTTGTGCCACAGGCCTTCGAAATT...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGAACCCCTTAATGACTACTCCCCTTTCCTCCTGCCCATGTAGGCTACAATTCTTTTTGCACTTATaGCACATATACAACTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQNPLMTTPLSSCPCRLQFFLHL*HIYNSV Trigger: GACAGAGTTGTATATGTGCCATAAGTGCAAAAAGAA...TTGTAGCCTACATGGGCAGGAGGAAAGGGGAGTAGTCATTAAGGGGTTCTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGAGTTCTCCACCATGGAGAGACTTGTGTTGCCACAAACTGTTTCTATCCCGCAAGCACAGTGCCTTaGGAAGTTTTTGAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRVLHHGETCVATNCFYPASTVP*EVFESK Trigger: TTTGGATTCAAAAACTTCCCAAGGCACTGTGCTTGC...GGGATAGAAACAGTTTGTGGCAACACAAGTCTCTCCATGGTGGAGAACTCTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTGTCCAGGCCTCTCAGTaGGAATTGAACGTATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGVQASQ*ELNVCI Trigger: GATACATACGTTCAATTCCCACTGAGAGGCCTGGAC...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAACATTGCTGTCCCCTTaGCTCCTGGTGTGGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIETLLSP*LLVWYV Trigger: AACATACCACACCAGGAGCCAAGGGGACAGCAATGT...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAATCCACAGTGGACACTTaGACAAGTCAAACAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIESTVDT*TSQTDP Trigger: TGGGTCTGTTTGACTTGTTCAAGTGTCCACTGTGGA...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | CATACAACTTGGTGGAAACCTAAGACTACTACAGCTTCCCCTGAAAGAACTCCACTGATCTCTTATGGTTaGGTAAGGGTATCTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HTTWWKPKTTTASPERTPLISYG*VRVSVH Trigger: ATGCACAGATACCCTTACTCAACCATAAGAGATCAG...TGGAGTTCTTTCAGGGGAAGCTGTAGTAGTCTTAGGTTTCCACCAAGTTGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAACTGGCCCATTTTCCTaGTTCTTAGAGCGCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIETGPFS*FLERLL Trigger: AAGCAAGCGCTCTAAGAATCAGGAAAATGGGCCAGT...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGATCAAGGGACTCAGGACTAAATaGAGTCTGGCTGCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPKLEIEKCILKFDSWIKGLRTK*SLAALP Trigger: TGGCAAGGCAGCCAGACTGCATTTAGTCCTGAGTCC...CTTGATCCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | AATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAGGAAAGGGCCTGTGGCACAAATaGCAGTCGTACTTCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: NINVELSHVSINFTGQGKGLWHK*QSYFHL Trigger: TAAATGGAAGTACGACTGCCATTTGTGCCACAGGCC...CTTTCCTTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCTAATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAGGACTAAATGCAGTCTaGCTGCCTTGCCATAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VANINVELSHVSINFTGQGLNAV*LPCHKA Trigger: TGCTTTATGGCAAGGCAGCCAGACTGCATTTAGTCC...TTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATTAGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCTTTTAAACACGTATTTGCACTTGTCAGTGTTCCTAGCCTGTCTGCCCTTCTTTTTGCACTTATaGCACATATACAACTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLLNTYLHLSVFLACLPFFLHL*HIYNSV Trigger: GACAGAGTTGTATATGTGCCATAAGTGCAAAAAGAA...GGGCAGACAGGCTAGGAACACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTGTTGTTCTGCATAAAATTTAGACCTGTGTTGTGCAAGAGAACCCTATTTCTGCTCCAGCTCTaGCCTGACGCTCCACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TALLFCIKFRPVLCKRTLFLLQL*PDAPHK Trigger: TTTATGTGGAGCGTCAGGCCAGAGCTGGAGCAGAAA...TAGGGTTCTCTTGCACAACACAGGTCTAAATTTTATGCAGAACAACAAAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| 3UTR CAA 72 bp | GCAGCCAGAATGAATGGTAACGTGCACAATGACATCTaGGCATCATACAGACTACTAAGTCTTAATGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AARMNGNVHNDI*ASYRLLSLNGQ Trigger: TTGGCCATTAAGACTTAGTAGTCTGTATGATGCCAAGATGTCATTGTGCACGTTACCATTCATTCTGGCTGC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGCCAGCTTGGTGTCGTTaGCCACAAAATCGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWPAWCR*PQNRHS Trigger: GCTGTGACGATTTTGTGGTCAACGACACCAAGCTGG...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAATGCTGTGACAACAGTTaGTGCTCCATTTATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIECCDNS*CSIYAA Trigger: TGCTGCATAAATGGAGCATCAACTGTTGTCACAGCA...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | AAAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGCGCTTGCTTCTGAACTaGCTTGGAATATCTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTILVQRHILSPGSASGRRLLLN*LGISKE Trigger: CTCCTTAGATATTCCAAGTCAGTTCAGAAGCAAGCG...CCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAAGCGCTTGCTTCTGAACTaGCTTGGAATATCTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLPLTKLNPKLEIEKRLLLN*LGISKE Trigger: CTCCTTAGATATTCCAAGTCAGTTCAGAAGCAAGCG...CTTTTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | AATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAGGAAAGCAGGTGCAAGCACAGTaGCTTGGGAAGTTTTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NINVELSHVSINFTGQGKQVQAQ*LGKFLN Trigger: ATTCAAAAACTTCCCAAGGCACTGTGCTTGCACCTG...CTTTCCTTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGCAGGTGCAAGCACAGTaGCTTGGGAAGTTTTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTILVQRHILSPGSASGRQVQAQ*LGKFLN Trigger: ATTCAAAAACTTCCCAAGGCACTGTGCTTGCACCTG...CCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAAGCAGGTGCAAGCACAGTaGCTTGGGAAGTTTTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLPLTKLNPKLEIEKQVQAQ*LGKFLN Trigger: ATTCAAAAACTTCCCAAGGCACTGTGCTTGCACCTG...CTTTTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTTTCGTGAACTGCATATaGTGTGTAATGTCCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGFVNCI*CVMSRT Trigger: GGTTCTGGACATTACACAGCATATGCAGTTCACGAA...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| 3UTR CAA 72 bp | GACTCTTGGATCAAGTATTTATGGAAAATGGAAATGTaGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSWIKYLWKMEM*SGVVDDSWSGG Trigger: ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAAATACTTGATCCAAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 ENSMUST00000174387.2 |
||
| 3UTR CAA 72 bp | ACAGCTTTGTTGTTCTGCATAAAATTTAGACCTGTGTaGTGCAAGAGAACCCTATGGAAAGGTACTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TALLFCIKFRPV*CKRTLWKGTCP Trigger: AGGGCAAGTACCTTTCCATAGGGTTCTCTTGCACAACACAGGTCTAAATTTTATGCAGAACAACAAAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAACTGATCTCTTATGGTTaGGTAAGGGTATCTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIELISYG*VRVSVH Trigger: ATGCACAGATACCCTTACTCAACCATAAGAGATCAG...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAAGATACACACTGTATGCTaGGCTTTCTCCTGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLPLTKLNPKLEIEKIHTVC*AFSCFS Trigger: AGAAAAGCAGGAGAAAGCTCAGCATACAGTGTGTAT...CTTTTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAAGCTCCAAATATTGCTGTaGCAACAGTTGATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLPLTKLNPKLEIEKLQILL*QQLMLH Trigger: ATGGAGCATCAACTGTTGTCACAGCAATATTTGGAG...CTTTTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | GGTACTGATCCAGAATGTAATTTCTGTTCTGAGGGAATGAAGATTTCTGTAGCTCGCTTGCTTCTGAACTaGCTTGGAATATCTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTDPECNFCSEGMKISVARLLLN*LGISKE Trigger: CTCCTTAGATATTCCAAGTCAGTTCAGAAGCAAGCG...AGCTACAGAAATCTTCATTCCCTCAGAACAGAAATTACATTCTGGATCAGTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR GCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGCTACTAAAGACACATTaGTGTCCCCTTGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWLLKTH*CPLGSW Trigger: CCAGGAGCCAAGGGGACAGCAATGTGTCTTTAGTAG...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCTAATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAGCAAGCACAGTGCCTTaGGAAGTTTTTGAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VANINVELSHVSINFTGQASTVP*EVFESK Trigger: TTTGGATTCAAAAACTTCCCAAGGCACTGTGCTTGC...TTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATTAGCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGTTTCTGCTCCAGCTCTaGCCTGACGCTCCACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWFLLQL*PDAPHK Trigger: TTTATGTGGAGCGTCAGGCCAGAGCTGGAGCAGAAA...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGACTGGCCCATTTTCCTaGTTCTTAGAGCGCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWTGPFS*FLERLL Trigger: AAGCAAGCGCTCTAAGAATCAGGAAAATGGGCCAGT...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTATGTTACTGAGTGACTaGAGGATAGCATTCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGMLLSD*RIAFMK Trigger: TTTCATGAATGCTATCCTTCAGTCACTCAGTAACAT...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAATGTGCTGTAGCTACTaGAATCCATACACACTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIEMCCSY*NPYTLY Trigger: ATACAGTGTGTATGGATTGCAGTAGCTACAGCACAT...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGGGCCTGTGGCACAAATaGCAGTCGTACTTCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWGLWHK*QSYFHL Trigger: TAAATGGAAGTACGACTGCCATTTGTGCCACAGGCC...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGAATTTCGAAGGCCTGTaGCACAAATGGCAGTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWNFEGL*HKWQSY Trigger: GTACGACTGCCATTTGTGCCACAGGCCTTCGAAATT...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGGGACTAAATGCAGTCTaGCTGCCTTGCCATAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWGLNAV*LPCHKA Trigger: TGCTTTATGGCAAGGCAGCCAGACTGCATTTAGTCC...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGGTCCAGGCCTCTCAGTaGGAATTGAACGTATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWVQASQ*ELNVCI Trigger: GATACATACGTTCAATTCCCACTGAGAGGCCTGGAC...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGTGCTGTGACAACAGTTaGTGCTCCATTTATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWCCDNS*CSIYAA Trigger: TGCTGCATAAATGGAGCATCAACTGTTGTCACAGCA...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAATTGATGCTCCATTTATaGAGCATTTGTTACTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIELMLHL*SICYLQ Trigger: CTGCAAGTAACAAATGCTGCATAAATGGAGCATCAA...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | GGTACTGATCCAGAATGTAATTTCTGTTCTGAGGGAATGAAGATTTCTGTAGCTACATACCTTCCACAGTaGACACTTGAACAAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTDPECNFCSEGMKISVATYLPQ*TLEQVK Trigger: TTTGACTTGTTCAAGTGTCCACTGTGGAAGGTATGT...AGCTACAGAAATCTTCATTCCCTCAGAACAGAAATTACATTCTGGATCAGTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGATCAAGGCAAGCACAGTGCCTTaGGAAGTTTTTGAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NPKLEIEKCILKFDSWIKASTVP*EVFESK Trigger: TTTGGATTCAAAAACTTCCCAAGGCACTGTGCTTGC...CTTGATCCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | AACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGATCAAGCTCAATGTTACTGAGTaGCTGAAGGATAGCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NPKLEIEKCILKFDSWIKLNVTE*LKDSIH Trigger: ATGAATGCTATCCTTCAGTCACTCAGTAACATTGAG...CTTGATCCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGATCAAGAATTTTCTTTTTCTGTaGCTGTCCGCTGTAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPKLEIEKCILKFDSWIKNFLFL*LSAVKA Trigger: AGCCTTTACAGCGGACAGGCACAGAAAAAGAAAATT...CTTGATCCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR GCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGTTCGTGAACTGCATATaGTGTGTAATGTCCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWFVNCI*CVMSRT Trigger: GGTTCTGGACATTACACAGCATATGCAGTTCACGAA...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAATTCTTTTTGCACTTATaGCACATATACAACTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MLGKSLPLTKLNPKLEIEFFLHL*HIYNSV Trigger: GACAGAGTTGTATATGTGCCATAAGTGCAAAAAGAA...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR TCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGAAAGACCTGAGTGACTaGAGGATAGCATTCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWKDLSD*RIAFMK Trigger: TTTCATGAATGCTATCCTTCAGTCACTCAGGTCTTT...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098613.9 |
||
| CDS-3UTR CCA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGTTTTCTGATCTCTTATaGTTGAGTAAGGGTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLNPKLEIEKCILKFDSWFSDLL*LSKGIC Trigger: ACAGATACCCTTACTCAACCATAAGAGATCAGAAAA...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | AGACCCATGCTCTGGAAACAGTTCCTACCTGAGCCTTTCCAAAGCCTGGGCAAGGAGCCGTTGGGGAACTaGGCTGAGTCCGGGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: RPMLWKQFLPEPFQSLGKEPLGN*AESGAM Trigger: CATCGCCCCGGACTCAGCCAAGTTCCCCAACGGCTC...CTTGCCCAGGCTTTGGAAAGGCTCAGGTAGGAACTGTTTCCAGAGCATGGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGGAACTAAAGGCGAGCGCCACCACTGCCCGGCTTGCTCTGCCTGGAAACCCAGCTTGGTGTCGTaGACCACAAAATCGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SAGTKGERHHCPACSAWKPSLVS*TTKSSQ Trigger: CTGTGACGATTTTGTGGTCAACGACACCAAGCTGGG...TTTCCAGGCAGAGCAAGCCGGGCAGTGGTGGCGCTCGCCTTTAGTTCCAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | TACTCGAAGCCATCTGTGGTTCGGCTTATGTTCAGAGGGCCTGAAAGTCCTGGCACCCAGGGGCTTTTGTaGGACCTGCACACGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: YSKPSVVRLMFRGPESPGTQGLL*DLHTLQ Trigger: CTGCAGCGTGTGCAGGTCCAACAAAAGCCCCTGGGT...GCCAGGACTTTCAGGCCCTCTGAACATAAGCCGAACCACAGATGGCTTCGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTAGTTGATGACTCATGGTCAGGAGGTATTACAGTTTTTCTGCTCCAGCTCGAGCCGTTGGGGAACTaGGCTGAGTCCGGGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: GVVDDSWSGGITVFLLQLEPLGN*AESGAM Trigger: CATCGCCCCGGACTCAGCCAAGTTCCCCAACGGCTC...GAGCTGGAGCAGAAAAACTGTAATACCTCCTGACCATGAGTCATCAACTACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139547.8 |
||
| CDS-3UTR CAA 90 bp | AATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAGGAAAGGAGCCGTTGGGGAACTaGGCTGAGTCCGGGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: NINVELSHVSINFTGQGKEPLGN*AESGAM Trigger: CATCGCCCCGGACTCAGCCAAGTTCCCCAACGGCTC...CTTTCCTTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGGAGTTGTACACTCTGACTTAAAGGTTTCAATACCTGCAAACCGAATCGACGACGGGGAGCCGTaGGGGAACTTGGCTGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CVGVVHSDLKVSIPANRIDDGEP*GNLAES Trigger: GGACTCAGCCAAGTTCCCCAACGGCTCCCCGTCGTC...GATTCGGTTTGCAGGTATTGAAACCTTTAAGTCAGAGTGTACAACTCCAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGTCAGACAGATCCACCCACAGGACATACCTCTACCATGCAGCTGAATGTCACAGTGCTGTCATaGAAATGGAACCAGCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SDGQTDPPTGHTSTMQLNVTVLS*KWNQRP Trigger: AGGCCGCTGGTTCCATTTCAATGACAGCACTGTGAC...ATTCAGCTGCATGGTAGAGGTATGTCCTGTGGGTGGATCTGTCTGACCATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGTCAGACAGATCCACCCACAGGACATACCTCTACCATGCAGCTGAATACAGAATGTAGGCCTTaGCCTTCCCAACGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SDGQTDPPTGHTSTMQLNTECRP*PSQRSP Trigger: AGGAGACCGTTGGGAAGGCAAAGGCCTACATTCTGT...ATTCAGCTGCATGGTAGAGGTATGTCCTGTGGGTGGATCTGTCTGACCATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | CCATGGAGAGACTTGTGTTGCCACAAACTGTTTCTATCCCCACCTGTGTGGGAGTTCCACAGTGGACACTaGAACAAGTCAAACAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: PWRDLCCHKLFLSPPVWEFHSGH*NKSNRP Trigger: GGGTCTGTTTGACTTGTTCAAGTGTCCACTGTGGAA...CTCCCACACAGGTGGGGATAGAAACAGTTTGTGGCAACACAAGTCTCTCCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAGGTACTTGCCCTGCACTGTCCTGTACCCAGCCCTGACATAACTAGTGTGGCCTCTCAGTGGGAATaGAACGTATGTATCGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKVLALHCPVPSPDITSVASQWE*NVCIDF Trigger: AAAGTCGATACATACGTTCAATTCCCACTGAGAGGC...CACACTAGTTATGTCAGGGCTGGGTACAGGACAGTGCAGGGCAAGTACCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS TCA 90 bp | GTAAGTGTTCTCTCACTTTCTGTACCAGGCCCAGCTTGGTGTCGTTaGCCACAAAATCGTCACAGCGATAACTTCCACAGTGGACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSVLSLSVPGPAWCR*PQNRHSDNFHSGHL Trigger: CAAGTGTCCACTGTGGAAGTTATCGCTGTGACGATTTTGTGGTCAACGACACCAAGCTGGGCCTGGTACAGAAAGTGAGAGAACACTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174387.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCTAATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAAACCCAGGGGCTTTTGTaGGACCTGCACACGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VANINVELSHVSINFTGQTQGLL*DLHTLQ Trigger: CTGCAGCGTGTGCAGGTCCAACAAAAGCCCCTGGGT...TTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATTAGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAACCCAGGGGCTTTTGTaGGACCTGCACACGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MLGKSLPLTKLNPKLEIETQGLL*DLHTLQ Trigger: CTGCAGCGTGTGCAGGTCCAACAAAAGCCCCTGGGT...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGGGAGTGAATTAAAACCCAGAGCTTCTATGACTCCACTTCTGCCTGGATTCCACAGTGGACACTaGAACAAGTCAAACAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: QAGSELKPRASMTPLLPGFHSGH*NKSNRP Trigger: GGGTCTGTTTGACTTGTTCAAGTGTCCACTGTGGAA...TCCAGGCAGAAGTGGAGTCATAGAAGCTCTGGGTTTTAATTCACTCCCTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTGCAACGGGACTGGCAGAGTTATTTAATGCTGAGGCACAGCAACCCTGAGTTCATGAAACAAGTGTaGCCCAAATTTCGAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVQRDWQSYLMLRHSNPEFMKQV*PKFRRP Trigger: AGGCCTTCGAAATTTGGGCAACACTTGTTTCATGAA...CTCAGGGTTGCTGTGCCTCAGCATTAAATAACTCTGCCAGTCCCGTTGCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS TCA 90 bp | GTAAGTGTTCTCTCACTTTCTGTACCAGGCCCAGCTTGGTGTCGTTaGCCACAAAATCGTCACAGCGATAACAGTATGTGCTGTAGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VSVLSLSVPGPAWCR*PQNRHSDNSMCCSY Trigger: GTAGCTACAGCACATACTGTTATCGCTGTGACGATTTTGTGGTCAACGACACCAAGCTGGGCCTGGTACAGAAAGTGAGAGAACACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGGAGCCGTTGGGGAACTaGGCTGAGTCCGGGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: KLNPKLEIEKCILKFDSWEPLGN*AESGAM Trigger: CATCGCCCCGGACTCAGCCAAGTTCCCCAACGGCTC...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 ENSMUST00000174387.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGCTCAAACCAGCAGAACTAGAGCTGCACATGCCTCTACCTCATGGAACTTCATGAAACAAGTGTaGCCCAAATTTCGAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVAQTSRTRAAHASTSWNFMKQV*PKFRRP Trigger: AGGCCTTCGAAATTTGGGCAACACTTGTTTCATGAA...GTTCCATGAGGTAGAGGCATGTGCAGCTCTAGTTCTGCTGGTTTGAGCCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCTTTTAAACACGTATTTGCACTTGTCAGTGTTCCTAGCCTGTCTGCCCGCCTCTCAGTGGGAATaGAACGTATGTATCGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLLNTYLHLSVFLACLPASQWE*NVCIDF Trigger: AAAGTCGATACATACGTTCAATTCCCACTGAGAGGC...GGGCAGACAGGCTAGGAACACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
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| CDS-3UTR CAA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTCCCAGCTTGGTGTCGTaGACCACAAAATCGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGPSLVS*TTKSSQ Trigger: CTGTGACGATTTTGTGGTCAACGACACCAAGCTGGG...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 ENSMUST00000174387.2 |
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| CDS-3UTR CAA 90 bp | AAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGGCCCAGCTTGGTGTCGTaGACCACAAAATCGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: KLFLFRDIYFHLVLLQAGPSLVS*TTKSSQ Trigger: CTGTGACGATTTTGTGGTCAACGACACCAAGCTGGG...CCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000139547.8 |
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| CDS-3UTR CAA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTCCACATATGAGGCAGTaGACCTCGTTCTGGAGAATT | + |
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Preference number: 5 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGPHMRQ*TSFWRI Trigger: AATTCTCCAGAACGAGGTCAACTGCCTCATATGTGG...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGCTTTTAAACACGTATTTGCACTTGTCAGTGTTCCTAGCCTGTCTGCCCTGCCTTGGGAAGTTTTaGAATCCAAAACTTCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: AGLLNTYLHLSVFLACLPCLGKF*NPKLLC Trigger: ACAAAGAAGTTTTGGATTCAAAAACTTCCCAAGGCA...GGGCAGACAGGCTAGGAACACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
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| CDS-3UTR CAA 90 bp | AAAAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGTCACAGTGCTGTCATaGAAATGGAACCAGCGGCCT | + |
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Preference number: 5 (lower is better) Translates to: KNYSCSETYTFTWFCFRQVTVLS*KWNQRP Trigger: AGGCCGCTGGTTCCATTTCAATGACAGCACTGTGAC...CTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
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| CDS-3UTR CAA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAATTCCACAGTGGACACTaGAACAAGTCAAACAGACCC | + |
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Preference number: 5 (lower is better) Translates to: MLGKSLPLTKLNPKLEIEFHSGH*NKSNRP Trigger: GGGTCTGTTTGACTTGTTCAAGTGTCCACTGTGGAA...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS-3UTR CAA 90 bp | AAACTATTCTTGTTCAGAGACATATACTTTCACCTGGTTCTGCTTCAGGCAGGGAATTCTCCTGTAGAATaGCTGAGCGGGAAACACCAT | + |
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Preference number: 5 (lower is better) Translates to: KLFLFRDIYFHLVLLQAGNSPVE*LSGKHH Trigger: ATGGTGTTTCCCGCTCAGCAATTCTACAGGAGAATT...CCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTCTCTGAACAAGAATAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
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| CDS-3UTR CAA 90 bp | GTAGCTAATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAACCACATATGAGGCAGTaGACCTCGTTCTGGAGAATT | + |
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Preference number: 5 (lower is better) Translates to: VANINVELSHVSINFTGQPHMRQ*TSFWRI Trigger: AATTCTCCAGAACGAGGTCAACTGCCTCATATGTGG...TTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATTAGCTAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
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| CDS-3UTR CAA 90 bp | AACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGATCAAGACAGAATGTAGGCCTTaGCCTTCCCAACGGTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: NPKLEIEKCILKFDSWIKTECRP*PSQRSP Trigger: AGGAGACCGTTGGGAAGGCAAAGGCCTACATTCTGT...CTTGATCCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS-3UTR CAA 90 bp | TTATGGAAAATGGAAATGTTGTCCGGTGTAGTTGATGACTCATGGTCAGGAGGTTTCATGAAACAAGTGTaGCCCAAATTTCGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LWKMEMLSGVVDDSWSGGFMKQV*PKFRRP Trigger: AGGCCTTCGAAATTTGGGCAACACTTGTTTCATGAA...ACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCCATTTTCCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS-3UTR CAA 90 bp | ATGTTGGGTAAGTCACTACCACTGACCAAACTAAACCCCAAACTGGAAATTGAAAATTCTCCTGTAGAATaGCTGAGCGGGAAACACCAT | + |
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Preference number: 5 (lower is better) Translates to: MLGKSLPLTKLNPKLEIENSPVE*LSGKHH Trigger: ATGGTGTTTCCCGCTCAGCAATTCTACAGGAGAATT...TTCAATTTCCAGTTTGGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS-3UTR CAA 90 bp | ACAGCTTTGTTGTTCTGCATAAAATTTAGACCTGTGTTGTGCAAGAGAACCCTACCACATATGAGGCAGTaGACCTCGTTCTGGAGAATT | + |
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Preference number: 5 (lower is better) Translates to: TALLFCIKFRPVLCKRTLPHMRQ*TSFWRI Trigger: AATTCTCCAGAACGAGGTCAACTGCCTCATATGTGG...TAGGGTTCTCTTGCACAACACAGGTCTAAATTTTATGCAGAACAACAAAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127569.8 |
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| CDS-3UTR CAA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGGTCACAGTGCTGTCATaGAAATGGAACCAGCGGCCT | + |
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Preference number: 5 (lower is better) Translates to: KLNPKLEIEKCILKFDSWVTVLS*KWNQRP Trigger: AGGCCGCTGGTTCCATTTCAATGACAGCACTGTGAC...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS-3UTR CAA 90 bp | AACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGATCAAGGCCTCTCAGTGGGAATaGAACGTATGTATCGACTTT | + |
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Preference number: 5 (lower is better) Translates to: NPKLEIEKCILKFDSWIKASQWE*NVCIDF Trigger: AAAGTCGATACATACGTTCAATTCCCACTGAGAGGC...CTTGATCCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS-3UTR CAA 90 bp | GTAGCTAATATTAATGTGGAATTGAGCCACGTCTCCATCAACTTCACTGGACAATGCCTTGGGAAGTTTTaGAATCCAAAACTTCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: VANINVELSHVSINFTGQCLGKF*NPKLLC Trigger: ACAAAGAAGTTTTGGATTCAAAAACTTCCCAAGGCA...TTGTCCAGTGAAGTTGATGGAGACGTGGCTCAATTCCACATTAATATTAGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
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| CDS-3UTR CAA 90 bp | AAACTAAACCCCAAACTGGAAATTGAAAAGTGCATACTGAAATTTGACTCTTGGTGCCTTGGGAAGTTTTaGAATCCAAAACTTCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: KLNPKLEIEKCILKFDSWCLGKF*NPKLLC Trigger: ACAAAGAAGTTTTGGATTCAAAAACTTCCCAAGGCA...CCAAGAGTCAAATTTCAGTATGCACTTTTCAATTTCCAGTTTGGGGTTTAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS CCA 72 bp | TGCACACGCTGCAGCACCAGGACGACGGGGAGCCGTTaGGGAACTTGGCTGAGTCCGGGGCGATGCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: CTRCSTRTTGSR*GTWLSPGRCRR Trigger: GCGTCTGCATCGCCCCGGACTCAGCCAAGTTCCCCAACGGCTCCCCGTCGTCCTGGTGCTGCAGCGTGTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS CCA 72 bp | CACTTGAACAAGTCAAACAGACCCAGGGGCTTTTGTTaGACCTGCACACGCTGCAGCACCAGGACGACGGGG | + |
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Preference number: 6 (lower is better) Translates to: HLNKSNRPRGFC*TCTRCSTRTTG Trigger: CCCCGTCGTCCTGGTGCTGCAGCGTGTGCAGGTCCAACAAAAGCCCCTGGGTCTGTTTGACTTGTTCAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS CAA 72 bp | ACACTTGAACAAGTCAAACAGACCCAGGGGCTTTTGTaGGACCTGCACACGCTGCAGCACCAGGACGACGGG | + |
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Preference number: 6 (lower is better) Translates to: TLEQVKQTQGLL*DLHTLQHQDDG Trigger: CCCGTCGTCCTGGTGCTGCAGCGTGTGCAGGTCCAACAAAAGCCCCTGGGTCTGTTTGACTTGTTCAAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS CAA 72 bp | TGGACACTTGAACAAGTCAAACAGACCCAGGGGCTTTaGTTGGACCTGCACACGCTGCAGCACCAGGACGAC | + |
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Preference number: 6 (lower is better) Translates to: WTLEQVKQTQGL*LDLHTLQHQDD Trigger: GTCGTCCTGGTGCTGCAGCGTGTGCAGGTCCAACAAAAGCCCCTGGGTCTGTTTGACTTGTTCAAGTGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 ENSMUST00000174387.2 |
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| CDS TCA 72 bp | CTCTCACTTTCTGTACCAGGCCCAGCTTGGTGTCGTTaGCCACAAAATCGTCACAGCGATAACAGTATGTGC | + |
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Preference number: 6 (lower is better) Translates to: LSLSVPGPAWCR*PQNRHSDNSMC Trigger: GCACATACTGTTATCGCTGTGACGATTTTGTGGTCAACGACACCAAGCTGGGCCTGGTACAGAAAGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
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| CDS TCA 72 bp | CTCTCACTTTCTGTACCAGGCCCAGCTTGGTGTCGTTaGCCACAAAATCGTCACAGCGATAACTTCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: LSLSVPGPAWCR*PQNRHSDNFHS Trigger: ACTGTGGAAGTTATCGCTGTGACGATTTTGTGGTCAACGACACCAAGCTGGGCCTGGTACAGAAAGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174387.2 |
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| CDS TCA 72 bp | TGCATGGCCATTCACATACCTTCCACAGTGGACACTTaGACAAGTCAAACAGACCCAGGGGCTTTTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: CMAIHIPSTVDT*TSQTDPGAFVG Trigger: TCCAACAAAAGCCCCTGGGTCTGTTTGACTTGTTCAAGTGTCCACTGTGGAAGGTATGTGAATGGCCATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
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| CDS GCA 72 bp | AATCGTCACAGCGATAACAGTATGTGCTGTAGCTACTaGAATCCATACACACTGTATGCTGAGCTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: NRHSDNSMCCSY*NPYTLYAELSP Trigger: AGGAGAAAGCTCAGCATACAGTGTGTATGGATTGCAGTAGCTACAGCACATACTGTTATCGCTGTGACGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098613.9 ENSMUST00000127569.8 |
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