Pregenerated sensors for USP29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051527Ensembl transcript IDs: ENSMUST00000054055.7, ENSMUST00000197117.5, ENSMUST00000198068.3, ENSMUST00000200535.6
Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACGTGGAACTAGAGTTCTAGAGAGTTGTGAGCTGCCGTGTGGGTaGTGGGAACTGAACCTGGGCCCATCTGGACGAGCAGCCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: SRGTRVLESCELPCG*WELNLGPSGRAASA Trigger: AGCACTGGCTGCTCGTCCAGATGGGCCCAGGTTCAGTTCCCAGCACCCACACGGCAGCTCACAACTCTCTAGAACTCTAGTTCCACGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CCA 90 bp | CGTGGAACTAGAGTTCTAGAGAGTTGTGAGCTGCCGTGTGGGTGCTaGGAACTGAACCTGGGCCCATCTGGACGAGCAGCCAGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: RGTRVLESCELPCGC*ELNLGPSGRAASAL Trigger: AAGAGCACTGGCTGCTCGTCCAGATGGGCCCAGGTTCAGTTCCCAGCACCCACACGGCAGCTCACAACTCTCTAGAACTCTAGTTCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR TCA 90 bp | ACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGTaGTCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTA | + |
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Preference number: 1 (lower is better) Translates to: TQARQLTLTCNSHSG*SHASCLQGHMRSHL Trigger: TAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGATCACCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| 3UTR CCA 90 bp | CTACAGTCATGGCCATCTATGCCCATGACCACCTTAAGTGGGTGCTaGGGATTTGAACTCAAGTCCCCATGCTTGCACATGACCCTTACC | + |
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Preference number: 1 (lower is better) Translates to: LQSWPSMPMTTLSGC*GFELKSPCLHMTLT Trigger: GGTAAGGGTCATGTGCAAGCATGGGGACTTGAGTTCAAATCCCCAGCACCCACTTAAGGTGGTCATGGGCATAGATGGCCATGACTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR TCA 90 bp | ATGGCCATCTATGCCCATGACCACCTTAAGTGGGTGCTGGGGATTTaGACTCAAGTCCCCATGCTTGCACATGACCCTTACCTACTGAAC | + |
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Preference number: 1 (lower is better) Translates to: MAIYAHDHLKWVLGI*TQVPMLAHDPYLLN Trigger: GTTCAGTAGGTAAGGGTCATGTGCAAGCATGGGGACTTGAGTTCAAATCCCCAGCACCCACTTAAGGTGGTCATGGGCATAGATGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR GCA 90 bp | ACACACCATGTAGACAGTGACACCAACTTATTGTTGCCTTCCCCTTaGAGCCCAGAACCAGGGGAAAGCATGCGCTGCTCTTTAACTGCT | + |
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Preference number: 1 (lower is better) Translates to: THHVDSDTNLLLPSP*SPEPGESMRCSLTA Trigger: AGCAGTTAAAGAGCAGCGCATGCTTTCCCCTGGTTCTGGGCTGCAAGGGGAAGGCAACAATAAGTTGGTGTCACTGTCTACATGGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR GCA 90 bp | ATGCTACAGTCATGGCCATCTATGCCCATGACCACCTTAAGTGGGTaGTGGGGATTTGAACTCAAGTCCCCATGCTTGCACATGACCCTT | + |
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Preference number: 1 (lower is better) Translates to: MLQSWPSMPMTTLSG*WGFELKSPCLHMTL Trigger: AAGGGTCATGTGCAAGCATGGGGACTTGAGTTCAAATCCCCAGCACCCACTTAAGGTGGTCATGGGCATAGATGGCCATGACTGTAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR TCA 90 bp | ATGTGGTGTTGGTGTCTCAGATCAAGCTACACACCATGTAGACAGTaGCACCAACTTATTGTTGCCTTCCCCTTGCAGCCCAGAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: MWCWCLRSSYTPCRQ*HQLIVAFPLQPRTR Trigger: CCTGGTTCTGGGCTGCAAGGGGAAGGCAACAATAAGTTGGTGTCACTGTCTACATGGTGTGTAGCTTGATCTGAGACACCAACACCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR GCA 90 bp | ACTCTTACCATTTTGGCTGCTGGTTGGCTAGTGAGCTCTGGAATCTaGCTTTGCTGTCCAATGCTACAGTCATGGCCATCTATGCCCATG | + |
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Preference number: 1 (lower is better) Translates to: TLTILAAGWLVSSGI*LCCPMLQSWPSMPM Trigger: CATGGGCATAGATGGCCATGACTGTAGCATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CCA 90 bp | AGAACCAGGGGAAAGCATGCGCTGCTCTTTAACTGCTTTATGGCATaGGGCTCTTGGAAATTAAGGGGAACCTTGCTTTCTCTTCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: RTRGKHALLFNCFMA*GSWKLRGTLLSLLS Trigger: GCTCAGAAGAGAAAGCAAGGTTCCCCTTAATTTCCAAGAGCCCCATGCCATAAAGCAGTTAAAGAGCAGCGCATGCTTTCCCCTGGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CCA 90 bp | GAGCCATACTCTTACCATTTTGGCTGCTGGTTGGCTAGTGAGCTCTaGAATCTGCCTTTGCTGTCCAATGCTACAGTCATGGCCATCTAT | + |
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Preference number: 1 (lower is better) Translates to: EPYSYHFGCWLASEL*NLPLLSNATVMAIY Trigger: ATAGATGGCCATGACTGTAGCATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGTATGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CCA 90 bp | AATACAATCTCACTGAGCCATACTCTTACCATTTTGGCTGCTGGTTaGCTAGTGAGCTCTGGAATCTGCCTTTGCTGTCCAATGCTACAG | + |
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Preference number: 1 (lower is better) Translates to: NTISLSHTLTILAAG*LVSSGICLCCPMLQ Trigger: CTGTAGCATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGTATGGCTCAGTGAGATTGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CCA 90 bp | TTTAAATACAATCTCACTGAGCCATACTCTTACCATTTTGGCTGCTaGTTGGCTAGTGAGCTCTGGAATCTGCCTTTGCTGTCCAATGCT | + |
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Preference number: 1 (lower is better) Translates to: FKYNLTEPYSYHFGC*LASELWNLPLLSNA Trigger: AGCATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGTATGGCTCAGTGAGATTGTATTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR GCA 90 bp | ATTTTTAAATACAATCTCACTGAGCCATACTCTTACCATTTTGGCTaGTGGTTGGCTAGTGAGCTCTGGAATCTGCCTTTGCTGTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: IFKYNLTEPYSYHFG*WLASELWNLPLLSN Trigger: ATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGTATGGCTCAGTGAGATTGTATTTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR GCA 90 bp | ATGGAGTCTGAAAATGAAGTGGAAGTATTTAAAGTAAGTTTCTTTTaGTTGCTCTCAACATACTGCCTATCATATGTGATCTCCTGCGAA | + |
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Preference number: 1 (lower is better) Translates to: MESENEVEVFKVSFF*LLSTYCLSYVISCE Trigger: TTCGCAGGAGATCACATATGATAGGCAGTATGTTGAGAGCAAGCAAAAGAAACTTACTTTAAATACTTCCACTTCATTTTCAGACTCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR GCA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCCCAGAAGACACCCAGTaGTGTCTTCCTCCACTTTCC | + |
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Preference number: 2 (lower is better) Translates to: NRSCSALGKSPASLRPGSPEDTQ*CLPPLS Trigger: GGAAAGTGGAGGAAGACAGCACTGGGTGTCTTCTGG...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR TCA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCACACCATGTAGACAGTaGCACCAACTTATTGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: NRSCSALGKSPASLRPGSTPCRQ*HQLIVA Trigger: GGCAACAATAAGTTGGTGTCACTGTCTACATGGTGT...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CAA 90 bp | TCAGATCAAGCTACACACCATGTAGACAGTGACACCAACTTATTGTaGCCTTCCCCTTGCAGCCCAGAACCAGGGGAAAGCATGCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SDQATHHVDSDTNLL*PSPCSPEPGESMRC Trigger: GCAGCGCATGCTTTCCCCTGGTTCTGGGCTGCAAGGGGAAGGCAACAATAAGTTGGTGTCACTGTCTACATGGTGTGTAGCTTGATCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR TCA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCACTTATCCTCTACCTTaGACCACCCCATTTTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: NRSCSALGKSPASLRPGSTYPLP*TTPFSH Trigger: ATGAGAAAATGGGGTGGTTCAAGGTAGAGGATAAGT...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGGGAAGTCAAGCTTaGGTCCTCTATGGGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHLGSQA*VLYGRS Trigger: ACTTCTCCCATAGAGGACCCAAGCTTGACTTCCCAA...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| 3UTR CAA 90 bp | TACCATTTTGGCTGCTGGTTGGCTAGTGAGCTCTGGAATCTGCCTTaGCTGTCCAATGCTACAGTCATGGCCATCTATGCCCATGACCAC | + |
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Preference number: 2 (lower is better) Translates to: YHFGCWLASELWNLP*LSNATVMAIYAHDH Trigger: GTGGTCATGGGCATAGATGGCCATGACTGTAGCATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR TCA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCTTGAACCCCAGCATTTaGACTTGTAATTGGTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NRSCSALGKSPASLRPGSLNPSI*TCNWFL Trigger: AAGGAACCAATTACAAGTTCAAATGCTGGGGTTCAA...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR GCA 90 bp | CCCACCCAAAGGGATAGCAACCCACAACCTGAGAACTCCTGTCCTAGACTAATCACACCAACTTATTGTTaGCTTCCCCTTGCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PTQRDSNPQPENSCPRLITPTYC*LPLAAQ Trigger: CTGGGCTGCAAGGGGAAGGCAACAATAAGTTGGTGT...GATTAGTCTAGGACAGGAGTTCTCAGGTTGTGGGTTGCTATCCCTTTGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR CCA 90 bp | TGTATGATGGTTTGCACACGGATGCATGCACATGTGAAAGCCAGAAGACACCCATTGGCTAGTGAGCTCTaGAATCTGCCTTTGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: CMMVCTRMHAHVKARRHPLASEL*NLPLLS Trigger: GGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAA...TGGGTGTCTTCTGGCTTTCACATGTGCATGCATCCGTGTGCAAACCATCATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR GCA 90 bp | TGGATACTAGGGATTGAACCTGGGGCCTCTGAAAGAGGAGAAAGTAATCTTAATTTCCGGGTGATCCCATaGCTCCTGTCTCCAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: WILGIEPGASERGESNLNFRVIP*LLSPRT Trigger: TGTCCTTGGAGACAGGAGGCATGGGATCACCCGGAA...ATTAAGATTACTTTCTCCTCTTTCAGAGGCCCCAGGTTCAATCCCTAGTATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTTCCAGAAGTCCTGAGCTCAATTCCCAACAGCCTCATGGTGGCTCACAACCTTATAGGAAAGAATaGTGCATAGCCTGCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: CSSRSPELNSQQPHGGSQPYRKE*CIACIS Trigger: GCTGATGCAGGCTATGCACCATTCTTTCCTATAAGG...TTGTGAGCCACCATGAGGCTGTTGGGAATTGAGCTCAGGACTTCTGGAAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR CCA 90 bp | GGCCCATCTGGACGAGCAGCCAGTGCTCTTAAGCCTGAGCATCTCTCTCTCCAAATTTATAATGAGATCTaGTGCTCTCTTCTGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: GPSGRAASALKPEHLSLQIYNEI*CSLLMC Trigger: ACACATCAGAAGAGAGCACCAGATCTCATTATAAAT...TTGGAGAGAGAGATGCTCAGGCTTAAGAGCACTGGCTGCTCGTCCAGATGGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CAA 90 bp | GATCCCTCTATAGATGGTCCTGAGCCACCATATAGTGGCTGGGAATaGAACTCAGGAACTCTGAAAAAGCTCCCAGAGTTCTTAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: DPSIDGPEPPYSGWE*NSGTLKKLPEFLTA Trigger: AGCTGTTAAGAACTCTGGGAGCTTTTTCAGAGTTCCTGAGTTCAATTCCCAGCCACTATATGGTGGCTCAGGACCATCTATAGAGGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CAA 90 bp | AAATACAATCTCACTGAGCCATACTCTTACCATTTTGGCTGCTGGTaGGCTAGTGAGCTCTGGAATCTGCCTTTGCTGTCCAATGCTACA | + |
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Preference number: 2 (lower is better) Translates to: KYNLTEPYSYHFGCW*ASELWNLPLLSNAT Trigger: TGTAGCATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGTATGGCTCAGTGAGATTGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR GCA 90 bp | CCCACCCAAAGGGATAGCAACCCACAACCTGAGAACTCCTGTCCTAGACTAATCTACATTTACTTTGTGTaGATTGATGTTTTGCGTGCG | + |
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Preference number: 2 (lower is better) Translates to: PTQRDSNPQPENSCPRLIYIYFV*IDVLRA Trigger: CGCACGCAAAACATCAATGCACACAAAGTAAATGTA...GATTAGTCTAGGACAGGAGTTCTCAGGTTGTGGGTTGCTATCCCTTTGGGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR GCA 90 bp | TGGATACTAGGGATTGAACCTGGGGCCTCTGAAAGAGGAGAAAGTAATCTTAATGTGAGCTCTGGAATCTaGCTTTGCTGTCCAATGCTA | + |
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Preference number: 2 (lower is better) Translates to: WILGIEPGASERGESNLNVSSGI*LCCPML Trigger: TAGCATTGGACAGCAAAGGCAGATTCCAGAGCTCAC...ATTAAGATTACTTTCTCCTCTTTCAGAGGCCCCAGGTTCAATCCCTAGTATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGGAGTGCTGTCTGCATGTATACCTACTTACCAGAAGATGGCATCAGATCCCCCAGAGTCCTTAGAGTaGTTTTCAATTTGCAAATAC | + |
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Preference number: 2 (lower is better) Translates to: VGVLSACIPTYQKMASDPPESLE*FSICKY Trigger: GTATTTGCAAATTGAAAAGCACTCTAAGGACTCTGG...GGGATCTGATGCCATCTTCTGGTAAGTAGGTATACATGCAGACAGCACTCCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CAA 90 bp | TTTCCATTTTTAAATACAATCTCACTGAGCCATACTCTTACCATTTaGGCTGCTGGTTGGCTAGTGAGCTCTGGAATCTGCCTTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: FPFLNTISLSHTLTI*AAGWLVSSGICLCC Trigger: ACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGTATGGCTCAGTGAGATTGTATTTAAAAATGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACCCTTATAGGAAAGAATaGTGCATAGCCTGCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: WFRTTFKKHHALLIRIAHPYRKE*CIACIS Trigger: GCTGATGCAGGCTATGCACCATTCTTTCCTATAAGG...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATAGTGGAAACTGTCCTTaGAGAAGACCTAAGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GGQLYDLIDESQTHMENNSGNCP*RRPKFS Trigger: ACTGAACTTAGGTCTTCTGCAAGGACAGTTTCCACT...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| 3UTR CAA 90 bp | TTGAAGGTAAAAATTGAAGCAATGTTTTTAATACATATAGGTGTTTaGTCTGCGTACTACGAAGCCAGAAGAGGCCAGTTGATCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LKVKIEAMFLIHIGV*SAYYEARRGQLILW Trigger: CCAGAGGATCAACTGGCCTCTTCTGGCTTCGTAGTACGCAGACAAAACACCTATATGTATTAAAAACATTGCTTCAATTTTTACCTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR GCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTAAGTGGAAACTGTCCTTaGAGAAGACCTAAGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: TFKKHHALLIRIAHTLKLSGNCP*RRPKFS Trigger: ACTGAACTTAGGTCTTCTGCAAGGACAGTTTCCACT...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| 3UTR CCA 72 bp | AGAGTTCTAGAGAGTTGTGAGCTGCCGTGTGGGTGCTaGGAACTGAACCTGGGCCCATCTGGACGAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: RVLESCELPCGC*ELNLGPSGRAA Trigger: GGCTGCTCGTCCAGATGGGCCCAGGTTCAGTTCCCAGCACCCACACGGCAGCTCACAACTCTCTAGAACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR GCA 72 bp | ACTAGAGTTCTAGAGAGTTGTGAGCTGCCGTGTGGGTaGTGGGAACTGAACCTGGGCCCATCTGGACGAGCA | + |
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Preference number: 3 (lower is better) Translates to: TRVLESCELPCG*WELNLGPSGRA Trigger: TGCTCGTCCAGATGGGCCCAGGTTCAGTTCCCAGCACCCACACGGCAGCTCACAACTCTCTAGAACTCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR CAA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCCTCTGGAATCTGCCTTaGCTGTCCAATGCTACAGTC | + |
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Preference number: 3 (lower is better) Translates to: NRSCSALGKSPASLRPGSLWNLP*LSNATV Trigger: GACTGTAGCATTGGACAGCAAAGGCAGATTCCAGAG...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR TCA 72 bp | AGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGTaGTCCCATGCCTCCTGTCTCCAAGGACACATGCGC | + |
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Preference number: 3 (lower is better) Translates to: RQLTLTCNSHSG*SHASCLQGHMR Trigger: GCGCATGTGTCCTTGGAGACAGGAGGCATGGGATCACCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| 3UTR GCA 72 bp | GTAGACAGTGACACCAACTTATTGTTGCCTTCCCCTTaGAGCCCAGAACCAGGGGAAAGCATGCGCTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: VDSDTNLLLPSP*SPEPGESMRCS Trigger: AGAGCAGCGCATGCTTTCCCCTGGTTCTGGGCTGCAAGGGGAAGGCAACAATAAGTTGGTGTCACTGTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR GCA 72 bp | GCTGCTGGTTGGCTAGTGAGCTCTGGAATCTGCCTTTaGTGTCCAATGCTACAGTCATGGCCATCTATGCCC | + |
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Preference number: 3 (lower is better) Translates to: AAGWLVSSGICL*CPMLQSWPSMP Trigger: GGGCATAGATGGCCATGACTGTAGCATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR-3UTR CAA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACCACCTAACACAGGTATaGGGAAGTCAAGCTTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHHLTQV*GSQAWV Trigger: GACCCAAGCTTGACTTCCCAATACCTGTGTTAGGTG...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| 3UTR GCA 72 bp | TCATGGCCATCTATGCCCATGACCACCTTAAGTGGGTaGTGGGGATTTGAACTCAAGTCCCCATGCTTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SWPSMPMTTLSG*WGFELKSPCLH Trigger: GTGCAAGCATGGGGACTTGAGTTCAAATCCCCAGCACCCACTTAAGGTGGTCATGGGCATAGATGGCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
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| 3UTR CCA 72 bp | CTAGAGGTCAGAGGGCAACTCATTAGAGTTGGGTCATaGGGCTTGGTGGCAGGTGTTTTTACCCAGAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: LEVRGQLIRVGS*GLVAGVFTQSP Trigger: AGGACTCTGGGTAAAAACACCTGCCACCAAGCCCCATGACCCAACTCTAATGAGTTGCCCTCTGACCTCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| 3UTR TCA 72 bp | TATGCCCATGACCACCTTAAGTGGGTGCTGGGGATTTaGACTCAAGTCCCCATGCTTGCACATGACCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: YAHDHLKWVLGI*TQVPMLAHDPY Trigger: GTAAGGGTCATGTGCAAGCATGGGGACTTGAGTTCAAATCCCCAGCACCCACTTAAGGTGGTCATGGGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CCA 72 bp | GAGGGCAACTCATTAGAGTTGGGTCATGGGGCTTGGTaGCAGGTGTTTTTACCCAGAGTCCTTAGAGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EGNSLELGHGAW*QVFLPRVLRVL Trigger: AAGCACTCTAAGGACTCTGGGTAAAAACACCTGCCACCAAGCCCCATGACCCAACTCTAATGAGTTGCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGAGTGCTGTCTGCATGTATACCTACTTACCAGAAGATGGCATCAGATCCCCTCAAGTCCCCATGCTaGCACATGACCCTTACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: VGVLSACIPTYQKMASDPLKSPC*HMTLTY Trigger: GTAGGTAAGGGTCATGTGCAAGCATGGGGACTTGAG...GGGATCTGATGCCATCTTCTGGTAAGTAGGTATACATGCAGACAGCACTCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR TCA 72 bp | TGGTGTCTCAGATCAAGCTACACACCATGTAGACAGTaGCACCAACTTATTGTTGCCTTCCCCTTGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: WCLRSSYTPCRQ*HQLIVAFPLQP Trigger: GGGCTGCAAGGGGAAGGCAACAATAAGTTGGTGTCACTGTCTACATGGTGTGTAGCTTGATCTGAGACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR GCA 72 bp | ATTTTGGCTGCTGGTTGGCTAGTGAGCTCTGGAATCTaGCTTTGCTGTCCAATGCTACAGTCATGGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: ILAAGWLVSSGI*LCCPMLQSWPS Trigger: AGATGGCCATGACTGTAGCATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR GCA 72 bp | TTTGAACTCAGACAACTGTTTCCCCATAATAGAAGCTaGTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGG | + |
|
Preference number: 3 (lower is better) Translates to: FELRQLFPHNRS*SALGKSPASLR Trigger: CCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATTATGGGGAAACAGTTGTCTGAGTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CCA 72 bp | TCACTGAGCCATACTCTTACCATTTTGGCTGCTGGTTaGCTAGTGAGCTCTGGAATCTGCCTTTGCTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLSHTLTILAAG*LVSSGICLCCP Trigger: TGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGTATGGCTCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CCA 72 bp | GCGCTGCTCTTTAACTGCTTTATGGCATGGGGCTCTTaGAAATTAAGGGGAACCTTGCTTTCTCTTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALLFNCFMAWGS*KLRGTLLSLLS Trigger: GCTCAGAAGAGAAAGCAAGGTTCCCCTTAATTTCCAAGAGCCCCATGCCATAAAGCAGTTAAAGAGCAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR-3UTR CAA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGTGTCAAGTTTTCATCTaGAGCTATGTGACTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SHASCLQGHMRSHLTQVLCQVFI*SYVTLL Trigger: AAGAAGAGTCACATAGCTCAAGATGAAAACTTGACA...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR GCA 72 bp | TACAATCTCACTGAGCCATACTCTTACCATTTTGGCTaGTGGTTGGCTAGTGAGCTCTGGAATCTGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: YNLTEPYSYHFG*WLASELWNLPL Trigger: CAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGTATGGCTCAGTGAGATTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CCA 72 bp | GGAAAGCATGCGCTGCTCTTTAACTGCTTTATGGCATaGGGCTCTTGGAAATTAAGGGGAACCTTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GKHALLFNCFMA*GSWKLRGTLLS Trigger: AGAAAGCAAGGTTCCCCTTAATTTCCAAGAGCCCCATGCCATAAAGCAGTTAAAGAGCAGCGCATGCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTTCCAGAAGTCCTGAGCTCAATTCCCAACAGCCTCATGGTGGCTCACAACTTGTAATTGGTTCCTaGCTGTGTTGTATTGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CSSRSPELNSQQPHGGSQLVIGS*LCCIGS Trigger: TGAACCAATACAACACAGCAAGGAACCAATTACAAG...TTGTGAGCCACCATGAGGCTGTTGGGAATTGAGCTCAGGACTTCTGGAAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CCA 72 bp | GCCTCATGGTGGCTCACAATCATTTATAATGAGATCTaGTGCTCTCTTCTGATGTGTAGGCCTACAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASWWLTIIYNEI*CSLLMCRPTRR Trigger: CCTTCTTGTAGGCCTACACATCAGAAGAGAGCACCAGATCTCATTATAAATGATTGTGAGCCACCATGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CCA 72 bp | AGGGAGTTTTCACCAAACAGGTTAGGAGTAGGTTCCTaGACCTGGGAACATGAACTTAGTATGTATGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: REFSPNRLGVGS*TWEHELSMYDS Trigger: AGAGTCATACATACTAAGTTCATGTTCCCAGGTCCAGGAACCTACTCCTAACCTGTTTGGTGAAAACTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR TCA 72 bp | TCACCTGCAGGACAGTCTAACACTTATCCTCTACCTTaGACCACCCCATTTTCTCATGTCAATCCTGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: SPAGQSNTYPLP*TTPFSHVNPDL Trigger: TAAATCAGGATTGACATGAGAAAATGGGGTGGTTCAAGGTAGAGGATAAGTGTTAGACTGTCCTGCAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTACACCTAACACAGGTATaGGGAAGTCAAGCTTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TFKKHHALLIRIAHTLKLHLTQV*GSQAWV Trigger: GACCCAAGCTTGACTTCCCAATACCTGTGTTAGGTG...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR TCA 72 bp | CTACTGGTATTGTTTCTGACATTGAACCCCAGCATTTaGACTTGTAATTGGTTCCTTGCTGTGTTGTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLVLFLTLNPSI*TCNWFLAVLYW Trigger: CCAATACAACACAGCAAGGAACCAATTACAAGTTCAAATGCTGGGGTTCAATGTCAGAAACAATACCAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR-3UTR CAA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATTGTCAAGTTTTCATCTaGAGCTATGTGACTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: YSTISPDPYYVNKWYSQNCQVFI*SYVTLL Trigger: AAGAAGAGTCACATAGCTCAAGATGAAAACTTGACA...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR TCA 72 bp | TTGCTCATACGGATAGCACACACACTAAAATTAGAATaGAAGCCAAGAGATGGCTTAGTGTTTAAAAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLIRIAHTLKLE*KPRDGLVFKSG Trigger: TCCACTTTTAAACACTAAGCCATCTCTTGGCTTTCATTCTAATTTTAGTGTGTGTGCTATCCGTATGAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR GCA 72 bp | TTTAAAGTAAGTTTCTTTTGCTTGCTCTCAACATACTaGCTATCATATGTGATCTCCTGCGAAAAGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FKVSFFCLLSTY*LSYVISCEKVL Trigger: AAGGACCTTTTCGCAGGAGATCACATATGATAGGCAGTATGTTGAGAGCAAGCAAAAGAAACTTACTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCGGGGAGCTCCCAAAGTaGCTGACCACACTGACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRSCSALGKSPASLRPGSGELPK*LTTLTS Trigger: GCTCGTCAGTGTGGTCAGCCACTTTGGGAGCTCCCC...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCTGCTCCTGTTTGTGCTaGGGATCTGGACCAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRSCSALGKSPASLRPGSCSCLC*GSGPNH Trigger: ATGGTTTGGTCCAGATCCGCAGCACAAACAGGAGCA...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCGCCTGTTCTCCTGAATaGAGGGATCTGAACTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NRSCSALGKSPASLRPGSACSPE*RDLNSR Trigger: TCGAGAGTTCAGATCCCTCCATTCAGGAGAACAGGC...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | GACAACTGTTTCCCCATAATAGAAGCTGCTCAGCTCTaGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNCFPIIEAAQL*GSPQLPYGLGA Trigger: AGCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATTATGGGGAAACAGTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACCCAGGCATCATCCCTTaGGAGACATCTGGGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHPGIIP*ETSGDV Trigger: TACATCCCCAGATGTCTCTCAAGGGATGATGCCTGG...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | GGCTGCTGGTTGGCTAGTGAGCTCTGGAATCTGCCTTaGCTGTCCAATGCTACAGTCATGGCCATCTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCWLASELWNLP*LSNATVMAIYA Trigger: GGCATAGATGGCCATGACTGTAGCATTGGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | GGCCCATCTGGACGAGCAGCCAGTGCTCTTAAGCCTGAGCATCTCTCTCTCCAAAAACAAACCTTTTGGTaGCAGCAGACCCAGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: GPSGRAASALKPEHLSLQKQTFW*QQTQHM Trigger: CATGTGCTGGGTCTGCTGGCACCAAAAGGTTTGTTT...TTGGAGAGAGAGATGCTCAGGCTTAAGAGCACTGGCTGCTCGTCCAGATGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGTCCACTGAGATGCCCTaGTGTGCTTGCTCCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLSTEMP*CACSCL Trigger: CAAACAGGAGCAAGCACACCAGGGCATCTCAGTGGA...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGACTCAGGTCCTTCTCTaGGTCTTCCTGAGAACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPSTQARQLTLTCNSHSGTQVLL*VFLRTN Trigger: GTTAGTTCTCAGGAAGACCCAGAGAAGGACCTGAGT...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | GGCCCATCTGGACGAGCAGCCAGTGCTCTTAAGCCTGAGCATCTCTCTCTCCAAACTCAGGTCCTTCTCTaGGTCTTCCTGAGAACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPSGRAASALKPEHLSLQTQVLL*VFLRTN Trigger: GTTAGTTCTCAGGAAGACCCAGAGAAGGACCTGAGT...TTGGAGAGAGAGATGCTCAGGCTTAAGAGCACTGGCTGCTCGTCCAGATGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | GCTACACACCATGTAGACAGTGACACCAACTTATTGTaGCCTTCCCCTTGCAGCCCAGAACCAGGGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATHHVDSDTNLL*PSPCSPEPGES Trigger: GCTTTCCCCTGGTTCTGGGCTGCAAGGGGAAGGCAACAATAAGTTGGTGTCACTGTCTACATGGTGTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGACATTATCACCCAGCTaGAACACCCTTCTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSTQARQLTLTCNSHSGTLSPS*NTLLLS Trigger: AGAAAGGAGAAGGGTGTTTCAGCTGGGTGATAATGT...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGCACAGCCTTCACAGATaGTGGAGCTATGCAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLHSLHR*WSYAAQ Trigger: TTGAGCTGCATAGCTCCATCATCTGTGAAGGCTGTG...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGCTGCTGCTCCTCACTTaGATCTTCATCCTCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: VPSTQARQLTLTCNSHSGLLLLT*IFILIH Trigger: ATGTATGAGGATGAAGATGCAAGTGAGGAGCAGCAG...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGGACCTTGCACTCAGATaGCTTTTTCAACAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPSTQARQLTLTCNSHSGDLALR*LFQQFL Trigger: GAGGAACTGTTGAAAAAGGCATCTGAGTGCAAGGTC...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGGACAAACAAACCTTTTaGTGCCAGCAGACCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLDKQTF*CQQTQH Trigger: GTGCTGGGTCTGCTGGCACCAAAAGGTTTGTTTGTC...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | GGCCCATCTGGACGAGCAGCCAGTGCTCTTAAGCCTGAGCATCTCTCTCTCCAAATCTTCCTGCAATTCTaGAGACCTACTCAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPSGRAASALKPEHLSLQIFLQF*RPTQVL Trigger: AAGGACCTGAGTAGGTCTCCAGAATTGCAGGAAGAT...TTGGAGAGAGAGATGCTCAGGCTTAAGAGCACTGGCTGCTCGTCCAGATGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGGCCTGTTCTCCTGAATaGAGGGATCTGAACTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLACSPE*RDLNSR Trigger: TCGAGAGTTCAGATCCCTCCATTCAGGAGAACAGGC...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGTTTCTACTATTTCGATaGCTGCTTCCTTCCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPSTQARQLTLTCNSHSGFLLFR*LLPSTE Trigger: CTCAGTGGAAGGAAGCAGTCATCGAAATAGTAGAAA...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGTGCTGTCTGCATGTATACCTACTTACCAGAAGATGGCATCAGATCCCCTTTCCAGGCCTCTCTaGTGCTGCTCCTCACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGVLSACIPTYQKMASDPLSRPL*CCSSLA Trigger: TGCAAGTGAGGAGCAGCAGCAGAGAGGCCTGGAAAG...GGGATCTGATGCCATCTTCTGGTAAGTAGGTATACATGCAGACAGCACTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACATCTTCCTGCAATTCTaGAGACCTACTCAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHIFLQF*RPTQVL Trigger: AAGGACCTGAGTAGGTCTCCAGAATTGCAGGAAGAT...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | CAAGCTACACACCATGTAGACAGTGACACCAACTTATaGTTGCCTTCCCCTTGCAGCCCAGAACCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QATHHVDSDTNL*LPSPCSPEPGE Trigger: TTCCCCTGGTTCTGGGCTGCAAGGGGAAGGCAACAATAAGTTGGTGTCACTGTCTACATGGTGTGTAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | CTCACTGAGCCATACTCTTACCATTTTGGCTGCTGGTaGGCTAGTGAGCTCTGGAATCTGCCTTTGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTEPYSYHFGCW*ASELWNLPLLS Trigger: GGACAGCAAAGGCAGATTCCAGAGCTCACTAGCCAACCAGCAGCCAAAATGGTAAGAGTATGGCTCAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | CTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCTaGAACTTAGTTTCTCCCTATGATTCAATGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGKSPASLRPGS*NLVSPYDSMES Trigger: AGACTCCATTGAATCATAGGGAGAAACTAAGTTCAAGCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGACATTATCACCCAGCTaGAACACCCTTCTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLTLSPS*NTLLLS Trigger: AGAAAGGAGAAGGGTGTTTCAGCTGGGTGATAATGT...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | GTAGGAGTGCTGTCTGCATGTATACCTACTTACCAGAAGATGGCATCAGATCCCCCAGGCATCATCCCTTaGGAGACATCTGGGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGVLSACIPTYQKMASDPPGIIP*ETSGDV Trigger: TACATCCCCAGATGTCTCTCAAGGGATGATGCCTGG...GGGATCTGATGCCATCTTCTGGTAAGTAGGTATACATGCAGACAGCACTCCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | CCCACCCAAAGGGATAGCAACCCACAACCTGAGAACTCCTGTCCTAGACTAATCGCCCGAGAATGTGTCTaGAACTGTGGAAATGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PTQRDSNPQPENSCPRLIARECV*NCGNGL Trigger: AAGTCCATTTCCACAGTTGCAGACACATTCTCGGGC...GATTAGTCTAGGACAGGAGTTCTCAGGTTGTGGGTTGCTATCCCTTTGGGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGATCATCAGAACCAAATaGAAAGGAATGTGGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VPSTQARQLTLTCNSHSGIIRTK*KGMWVI Trigger: GATGACCCACATTCCTTTGCATTTGGTTCTGATGAT...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACGTCCTTTGCAAAGGTTaGAATCCCAAAGACAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHVLCKG*NPKDRL Trigger: CAATCTGTCTTTGGGATTCCAACCTTTGCAAAGGAC...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGATGTGTCTGCAACTGTaGAAATGGACTTCTTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VPSTQARQLTLTCNSHSGMCLQL*KWTSLH Trigger: GTGTAAAGAAGTCCATTTCCACAGTTGCAGACACAT...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACCATAGGATTTGGAATTaGAAGCAGGTTCAAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHHRIWN*KQVQVS Trigger: GGAAACTTGAACCTGCTTTCAATTCCAAATCCTATG...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCCAGAAGTCCTGAGCTCAATTCCCAACAGCCTCATGGTGGCTCACAATTGCTGGGACTCACATaGAGTAGACGAATCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSRSPELNSQQPHGGSQLLGLT*SRRIQE Trigger: TTCCTGGATTCGTCTACTCCATGTGAGTCCCAGCAA...TTGTGAGCCACCATGAGGCTGTTGGGAATTGAGCTCAGGACTTCTGGAAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGTGCTGTCTGCATGTATACCTACTTACCAGAAGATGGCATCAGATCCCTTTTCTCCTCTCTTTTaGCCGCCCGTGGTGTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGVLSACIPTYQKMASDPFSPLF*PPVVFD Trigger: GTCAAACACCACGGGCGGCCAAAAGAGAGGAGAAAA...GGGATCTGATGCCATCTTCTGGTAAGTAGGTATACATGCAGACAGCACTCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCATGTTCAGTTTCAGCTaGTCTAAACACAGACTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRSCSALGKSPASLRPGSMFSFS*SKHRLK Trigger: TTTAAGTCTGTGTTTAGACCAGCTGAAACTGAACAT...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGTCTCAGTATCCCACATaGCATTTACTTTTTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSTQARQLTLTCNSHSGSQYPT*HLLFPC Trigger: ACATGGAAAAAGTAAATGCCATGTGGGATACTGAGA...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGCATGGTGCAGGTCAATaGAGAGGTAATTACTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLHGAGQ*RGNYSL Trigger: AAGTGAGTAATTACCTCTCCATTGACCTGCACCATG...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACAAATTCTGGATTCTCTaGAACCTCTTGAAGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHKFWIL*NLLKTH Trigger: ATGGGTCTTCAAGAGGTTCCAGAGAATCCAGAATTT...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACAAATGCAAAGGAATGTaGGTCATCTTCCTGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHKCKGM*VIFLQF Trigger: GAATTGCAGGAAGATGACCCACATTCCTTTGCATTT...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGAGACGAATCCAGGAATaGCTTCAAATGTTCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLRRIQE*LQMFNI Trigger: GATGTTGAACATTTGAAGTCATTCCTGGATTCGTCT...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGCTCCAGTCCAAATATTaGTACATCTCTGTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLLQSKY*YISVIR Trigger: TCTGATGACAGAGATGTATCAATATTTGGACTGGAG...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | GTAGGAGTGCTGTCTGCATGTATACCTACTTACCAGAAGATGGCATCAGATCCCATGGGATGCCTTGAGTaGGTAAGTCCTTTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVLSACIPTYQKMASDPMGCLE*VSPLQR Trigger: CCTTTGCAAAGGACTTACTCACTCAAGGCATCCCAT...GGGATCTGATGCCATCTTCTGGTAAGTAGGTATACATGCAGACAGCACTCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | TGTTCTTCCAGAAGTCCTGAGCTCAATTCCCAACAGCCTCATGGTGGCTCACAACTGCTGCTCCTCACTTaGATCTTCATCCTCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: CSSRSPELNSQQPHGGSQLLLLT*IFILIH Trigger: ATGTATGAGGATGAAGATGCAAGTGAGGAGCAGCAG...TTGTGAGCCACCATGAGGCTGTTGGGAATTGAGCTCAGGACTTCTGGAAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATCCACAGGCTGCCTCCTaGTGCTCCCCGCAAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGQLYDLIDESQTHMENNPQAAS*CSPQNG Trigger: TCCATTTTGCGGGGAGCACCAGGAGGCAGCCTGTGG...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGAAATTCTGGATTCTCTaGAACCTCTTGAAGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLKFWIL*NLLKTH Trigger: ATGGGTCTTCAAGAGGTTCCAGAGAATCCAGAATTT...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | TGGATACTAGGGATTGAACCTGGGGCCTCTGAAAGAGGAGAAAGTAATCTTAATATGGGCTCCATGGGTTaGTGGGACTCACATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WILGIEPGASERGESNLNMGSMG*WDSHGV Trigger: TACTCCATGTGAGTCCCAGCAACCCATGGAGCCCAT...ATTAAGATTACTTTCTCCTCTTTCAGAGGCCCCAGGTTCAATCCCTAGTATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATCAGGCTGCCTCCTGGTaGTCCCCGCAAAATGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GGQLYDLIDESQTHMENNQAASW*SPQNGS Trigger: TGATCCATTTTGCGGGGAGCACCAGGAGGCAGCCTG...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGGTTCAAGTTTCCAATTaGTACGCTTTTCTTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHASCLQGHMRSHLTQVLVQVSN*YAFLVL Trigger: GAGAACAAGAAAAGCGTAGCAATTGGAAACTTGAAC...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACATGTTCAGTTTCAGCTaGTCTAAACACAGACTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHMFSFS*SKHRLK Trigger: TTTAAGTCTGTGTTTAGACCAGCTGAAACTGAACAT...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCAGGGGAGCTCCCAAAGTaGCTGACCACACTGACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSGELPK*LTTLTS Trigger: GCTCGTCAGTGTGGTCAGCCACTTTGGGAGCTCCCC...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | ATAGATGGTCCTGAGCCACCATATAGTGGCTGGGAATaGAACTCAGGAACTCTGAAAAAGCTCCCAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IDGPEPPYSGWE*NSGTLKKLPEF Trigger: GAACTCTGGGAGCTTTTTCAGAGTTCCTGAGTTCAATTCCCAGCCACTATATGGTGGCTCAGGACCATCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACTCCACTGAGATGCCCTaGTGTGCTTGCTCCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WFRTTFKKHHALLIRIAHSTEMP*CACSCL Trigger: CAAACAGGAGCAAGCACACCAGGGCATCTCAGTGGA...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TGTATGATGGTTTGCACACGGATGCATGCACATGTGAAAGCCAGAAGACACCCACATAGGATTTGGAATTaGAAGCAGGTTCAAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMMVCTRMHAHVKARRHPHRIWN*KQVQVS Trigger: GGAAACTTGAACCTGCTTTCAATTCCAAATCCTATG...TGGGTGTCTTCTGGCTTTCACATGTGCATGCATCCGTGTGCAAACCATCATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACTCCCATGGGATGCCTTaGGTGAGTAAGTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WFRTTFKKHHALLIRIAHSHGMP*VSKSFA Trigger: TGCAAAGGACTTACTCACTCAAGGCATCCCATGGGA...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATGTTTCAGATGAACAATaGGGACCCTGGGGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGQLYDLIDESQTHMENNVSDEQ*GPWGVS Trigger: GGAGACTCCCCAGGGTCCTCATTGTTCATCTGAAAC...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTACAGGCTGCCTCCTGGTaGTCCCCGCAAAATGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLQAASW*SPQNGS Trigger: TGATCCATTTTGCGGGGAGCACCAGGAGGCAGCCTG...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGTATGATGGTTTGCACACGGATGCATGCACATGTGAAAGCCAGAAGACACCCAATGTGTCTGCAACTGTaGAAATGGACTTCTTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: CMMVCTRMHAHVKARRHPMCLQL*KWTSLH Trigger: GTGTAAAGAAGTCCATTTCCACAGTTGCAGACACAT...TGGGTGTCTTCTGGCTTTCACATGTGCATGCATCCGTGTGCAAACCATCATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCCAGAAGTCCTGAGCTCAATTCCCAACAGCCTCATGGTGGCTCACAAAGACTTAAAAACTCATaGGCATCGTTCTGTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: CSSRSPELNSQQPHGGSQRLKNS*ASFCSL Trigger: CAATGAACAGAACGATGCCCATGAGTTTTTAAGTCT...TTGTGAGCCACCATGAGGCTGTTGGGAATTGAGCTCAGGACTTCTGGAAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATCACAGCCTTCACAGATaGTGGAGCTATGCAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSTISPDPYYVNKWYSQNHSLHR*WSYAAQ Trigger: TTGAGCTGCATAGCTCCATCATCTGTGAAGGCTGTG...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCAGTTTCAGATGAACAATaGGGACCCTGGGGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSVSDEQ*GPWGVS Trigger: GGAGACTCCCCAGGGTCCTCATTGTTCATCTGAAAC...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACTTACGTAATGGCCTaGATTTGGGGAGCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WFRTTFKKHHALLIRIAHTYVMA*IWGAPK Trigger: TTTGGGAGCTCCCCAAATTCAGGCCATTACGTAAGT...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATTGCTCCTGTTTGTGCTaGGGATCTGGACCAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGQLYDLIDESQTHMENNCSCLC*GSGPNH Trigger: ATGGTTTGGTCCAGATCCGCAGCACAAACAGGAGCA...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCAATGGGCTCCATGGGTTaGTGGGACTCACATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSMGSMG*WDSHGV Trigger: TACTCCATGTGAGTCCCAGCAACCCATGGAGCCCAT...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACGAAATCTCAACTGGCTaGTCACTCTTCACTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WFRTTFKKHHALLIRIAHEISTG*SLFTGN Trigger: GTTGCCAGTGAAGAGTGAGCAGCCAGTTGAGATTTC...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTACTTTCCAGGCCTCTCTaGTGCTGCTCCTCACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLLSRPL*CCSSLA Trigger: TGCAAGTGAGGAGCAGCAGCAGAGAGGCCTGGAAAG...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATTGGTGTCCCACTTTCTaGAGTGGTATTCAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: YSTISPDPYYVNKWYSQNWCPTF*SGIQGS Trigger: GGATCCCTGAATACCACTCCAGAAAGTGGGACACCA...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACCGCAAAATGGATCACTaGTTTCAAGGTCATCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WFRTTFKKHHALLIRIAHRKMDH*FQGHPD Trigger: GTCAGGATGACCTTGAAAGCAGTGATCCATTTTGCG...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCAGTGCTCCCCGCAAAATaGATCACTGCTTTCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSVLPAK*ITAFKV Trigger: GACCTTGAAAGCAGTGATCCATTTTGCGGGGAGCAC...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCAGACAAACAAACCTTTTaGTGCCAGCAGACCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSDKQTF*CQQTQH Trigger: GTGCTGGGTCTGCTGGCACCAAAAGGTTTGTTTGTC...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATCTGCTCACTCTTCACTaGCAACAAGTCAGTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YSTISPDPYYVNKWYSQNLLTLH*QQVSGN Trigger: GTTACCACTGACTTGTTGCCAGTGAAGAGTGAGCAG...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | GAACTTAGTATGTATGACTCTGCCAGCAAGATGGAGTaGTTCTTGAGCTGTTTGAACTCAGACAACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELSMYDSASKME*FLSCLNSDNCF Trigger: GAAACAGTTGTCTGAGTTCAAACAGCTCAAGAACAACTCCATCTTGCTGGCAGAGTCATACATACTAAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTATCCCATGGGATGCCTTaGGTGAGTAAGTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLSHGMP*VSKSFA Trigger: TGCAAAGGACTTACTCACTCAAGGCATCCCATGGGA...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCAACTTACGTAATGGCCTaGATTTGGGGAGCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSTYVMA*IWGAPK Trigger: TTTGGGAGCTCCCCAAATTCAGGCCATTACGTAAGT...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCAGAAATCTCAACTGGCTaGTCACTCTTCACTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSEISTG*SLFTGN Trigger: GTTGCCAGTGAAGAGTGAGCAGCCAGTTGAGATTTC...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCATTGCTGGGACTCACATaGAGTAGACGAATCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSLLGLT*SRRIQE Trigger: TTCCTGGATTCGTCTACTCCATGTGAGTCCCAGCAA...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTATTTTCTCCTCTCTTTTaGCCGCCCGTGGTGTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLFSPLF*PPVVFD Trigger: GTCAAACACCACGGGCGGCCAAAAGAGAGGAGAAAA...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCACTGCTCACTCTTCACTaGCAACAAGTCAGTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSLLTLH*QQVSGN Trigger: GTTACCACTGACTTGTTGCCAGTGAAGAGTGAGCAG...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGGATACTAGGGATTGAACCTGGGGCCTCTGAAAGAGGAGAAAGTAATCTTAATAAATGCAAAGGAATGTaGGTCATCTTCCTGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: WILGIEPGASERGESNLNKCKGM*VIFLQF Trigger: GAATTGCAGGAAGATGACCCACATTCCTTTGCATTT...ATTAAGATTACTTTCTCCTCTTTCAGAGGCCCCAGGTTCAATCCCTAGTATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACCCATCTCCCCATCTTTaGAATCATCAGAACCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: WFRTTFKKHHALLIRIAHPSPHL*NHQNQM Trigger: CATTTGGTTCTGATGATTCCAAAGATGGGGAGATGG...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATTTTCTACTATTTCGATaGCTGCTTCCTTCCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSTISPDPYYVNKWYSQNFLLFR*LLPSTE Trigger: CTCAGTGGAAGGAAGCAGTCATCGAAATAGTAGAAA...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTAATGGGATGCCTTGAGTaGGTAAGTCCTTTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLMGCLE*VSPLQR Trigger: CCTTTGCAAAGGACTTACTCACTCAAGGCATCCCAT...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTAGCCCGAGAATGTGTCTaGAACTGTGGAAATGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLARECV*NCGNGL Trigger: AAGTCCATTTCCACAGTTGCAGACACATTCTCGGGC...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTAAAACAAACCTTTTGGTaGCAGCAGACCCAGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLKQTFW*QQTQHM Trigger: CATGTGCTGGGTCTGCTGGCACCAAAAGGTTTGTTT...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCAGACCTTGCACTCAGATaGCTTTTTCAACAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSDLALR*LFQQFL Trigger: GAGGAACTGTTGAAAAAGGCATCTGAGTGCAAGGTC...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATCCATCTCCCCATCTTTaGAATCATCAGAACCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: GGQLYDLIDESQTHMENNPSPHL*NHQNQM Trigger: CATTTGGTTCTGATGATTCCAAAGATGGGGAGATGG...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATCTCCAGTCCAAATATTaGTACATCTCTGTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGQLYDLIDESQTHMENNLQSKY*YISVIR Trigger: TCTGATGACAGAGATGTATCAATATTTGGACTGGAG...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCAGTCCTTTGCAAAGGTTaGAATCCCAAAGACAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSVLCKG*NPKDRL Trigger: CAATCTGTCTTTGGGATTCCAACCTTTGCAAAGGAC...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACAGACTTAAAAACTCATaGGCATCGTTCTGTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: WFRTTFKKHHALLIRIAHRLKNS*ASFCSL Trigger: CAATGAACAGAACGATGCCCATGAGTTTTTAAGTCT...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCACATGGTGCAGGTCAATaGAGAGGTAATTACTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSHGAGQ*RGNYSL Trigger: AAGTGAGTAATTACCTCTCCATTGACCTGCACCATG...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATTCTCAGTATCCCACATaGCATTTACTTTTTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YSTISPDPYYVNKWYSQNSQYPT*HLLFPC Trigger: ACATGGAAAAAGTAAATGCCATGTGGGATACTGAGA...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATAGCTTCCTGTTTTCATaGCAGTGGGAAGATATATTT | + |
|
Preference number: 4 (lower is better) Translates to: GGQLYDLIDESQTHMENNSFLFS*QWEDIF Trigger: AAATATATCTTCCCACTGCCATGAAAACAGGAAGCT...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | AAAATTGAAGCAATGTTTTTAATACATATAGGTGTTTaGTCTGCGTACTACGAAGCCAGAAGAGGCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KIEAMFLIHIGV*SAYYEARRGQL Trigger: CAACTGGCCTCTTCTGGCTTCGTAGTACGCAGACAAAACACCTATATGTATTAAAAACATTGCTTCAATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCACTCCATTATGTGTTATaGTCTCCAGTCCAAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: SVRCFMSSFHLELCDSSSLHYVL*SPVQIL Trigger: CAATATTTGGACTGGAGATCATAACACATAATGGAG...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR TCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTACTCCATTATGTGTTATaGTCTCCAGTCCAAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLLHYVL*SPVQIL Trigger: CAATATTTGGACTGGAGATCATAACACATAATGGAG...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR GCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTAGTTCAAGTTTCCAATTaGTACGCTTTTCTTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLVQVSN*YAFLVL Trigger: GAGAACAAGAAAAGCGTAGCAATTGGAAACTTGAAC...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CCA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTAAGCTTCCTGTTTTCATaGCAGTGGGAAGATATATTT | + |
|
Preference number: 4 (lower is better) Translates to: TFKKHHALLIRIAHTLKLSFLFS*QWEDIF Trigger: AAATATATCTTCCCACTGCCATGAAAACAGGAAGCT...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| 3UTR CAA 72 bp | AATGAAGTGGAAGTATTTAAAGTAAGTTTCTTTTGCTaGCTCTCAACATACTGCCTATCATATGTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NEVEVFKVSFFC*LSTYCLSYVIS Trigger: GGAGATCACATATGATAGGCAGTATGTTGAGAGCAAGCAAAAGAAACTTACTTTAAATACTTCCACTTCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS GCA 90 bp | GGGATCCACAGGCTGCCTCCTGGTGCTCCCCGCAAAATGGATCACTaGTTTCAAGGTCATCCTGACTACTCATGGGCTCCATGGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GIHRLPPGAPRKMDH*FQGHPDYSWAPWVA Trigger: AGCAACCCATGGAGCCCATGAGTAGTCAGGATGACCTTGAAAGCAGTGATCCATTTTGCGGGGAGCACCAGGAGGCAGCCTGTGGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGTGTGCTTGCTCCTGTTaGTGCTGCGGATCTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: VPSTQARQLTLTCNSHSGCACSC*CCGSGP Trigger: TGGTCCAGATCCGCAGCACAAACAGGAGCAAGCACA...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GGCCCATCTGGACGAGCAGCCAGTGCTCTTAAGCCTGAGCATCTCTCTCTCCAATGCAAGACCTGGATCTaGGATGCTCAGAGGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GPSGRAASALKPEHLSLQCKTWI*DAQRLT Trigger: TGTGAGCCTCTGAGCATCCAAGATCCAGGTCTTGCA...TTGGAGAGAGAGATGCTCAGGCTTAAGAGCACTGGCTGCTCGTCCAGATGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS CCA 90 bp | GGTATTCAGGGATCCACAGGCTGCCTCCTGGTGCTCCCCGCAAAATaGATCACTGCTTTCAAGGTCATCCTGACTACTCATGGGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GIQGSTGCLLVLPAK*ITAFKVILTTHGLH Trigger: ATGGAGCCCATGAGTAGTCAGGATGACCTTGAAAGCAGTGATCCATTTTGCGGGGAGCACCAGGAGGCAGCCTGTGGATCCCTGAATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGGCTGCTGCTCCTCACTaGCATCTTCATCCTCATACA | + |
|
Preference number: 5 (lower is better) Translates to: VPSTQARQLTLTCNSHSGAAAPH*HLHPHT Trigger: TGTATGAGGATGAAGATGCAAGTGAGGAGCAGCAGC...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGACAGCTTTCTCTGCTTaGCCGCCTCTGTTCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SHASCLQGHMRSHLTQVLTAFSA*PPLFLE Trigger: TTCCAGGAACAGAGGCGGCAAAGCAGAGAAAGCTGT...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGCCCATCTCCCCATCTTaGGAATCATCAGAACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VPSTQARQLTLTCNSHSGPISPS*ESSEPN Trigger: ATTTGGTTCTGATGATTCCAAAGATGGGGAGATGGG...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS TCA 90 bp | CTTTCTGCCTTGTTTTTCTCCTCTCTTTTGGCCGCCCGTGGTGTTTaGCATAGAAAGTGGCATCTTGCGGGACAGTGGTGTCCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSALFFSSLLAARGV*HRKWHLAGQWCPTF Trigger: GAAAGTGGGACACCACTGTCCCGCAAGATGCCACTTTCTATGTCAAACACCACGGGCGGCCAAAAGAGAGGAGAAAAACAAGGCAGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACGATAACATTGACTGGTaGAAGATCCCAGGCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHDNIDW*KIPGII Trigger: GATGATGCCTGGGATCTTCAACCAGTCAATGTTATC...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | AATAGAAGCTGCTCAGCTCTTGGGAAGTCCCCAGCTTCCCTACGGCCTGGGAGCCATTATCTGGAAGCTTaGTATTTCAGCATCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: NRSCSALGKSPASLRPGSHYLEA*YFSIHT Trigger: AGTGTGGATGCTGAAATACAAAGCTTCCAGATAATG...GCTCCCAGGCCGTAGGGAAGCTGGGGACTTCCCAAGAGCTGAGCAGCTTCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGCCATCATTGAGTCAGTaGCTAGTGATGTCTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VPSTQARQLTLTCNSHSGPSLSQ*LVMSFV Trigger: GACAAAAGACATCACTAGCAACTGACTCAATGATGG...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGTATGATGGTTTGCACACGGATGCATGCACATGTGAAAGCCAGAAGACACCCACGTAATGGCCTGAATTaGGGGAGCTCCCAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CMMVCTRMHAHVKARRHPRNGLN*GSSQSG Trigger: GCCACTTTGGGAGCTCCCCAAATTCAGGCCATTACG...TGGGTGTCTTCTGGCTTTCACATGTGCATGCATCCGTGTGCAAACCATCATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS TCA 90 bp | CCAGGCTTGCTTTTGAAAGTCATACACATCACTTACGTAATGGCCTaGATTTGGGGAGCTCCCAAAGTGGCTGACCACACTGACGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLLLKVIHITYVMA*IWGAPKVADHTDEP Trigger: AGGCTCGTCAGTGTGGTCAGCCACTTTGGGAGCTCCCCAAATTCAGGCCATTACGTAAGTGATGTGTATGACTTTCAAAAGCAAGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTTGTAATTCGCATTCCGGGTCTCCAGTCCAAATATaGATACATCTCTGTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPSTQARQLTLTCNSHSGSPVQI*IHLCHQ Trigger: CTGATGACAGAGATGTATCAATATTTGGACTGGAGA...CCCGGAATGCGAATTACAAGTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACAGTCCTTTGCAAAGGTaGGAATCCCAAAGACAGATT | + |
|
Preference number: 5 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHSPLQR*ESQRQI Trigger: AATCTGTCTTTGGGATTCCAACCTTTGCAAAGGACT...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGGTAAAGGAGCCAGGCTaGCTTTTGAAAGTCATACAC | + |
|
Preference number: 5 (lower is better) Translates to: SHASCLQGHMRSHLTQVLVKEPG*LLKVIH Trigger: GTGTATGACTTTCAAAAGCAAGCCTGGCTCCTTTAC...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACGATGCCCTGGTGTGCTaGCTCCTGTTTGTGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WFRTTFKKHHALLIRIAHDALVC*LLFVLR Trigger: CCGCAGCACAAACAGGAGCAAGCACACCAGGGCATC...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACCTCCTTTCTTCCAACTaGAAAGAAACCACCAGATTA | + |
|
Preference number: 5 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHLLSSN*KETTRL Trigger: TAATCTGGTGGTTTCTTTCAAGTTGGAAGAAAGGAG...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGGATACTAGGGATTGAACCTGGGGCCTCTGAAAGAGGAGAAAGTAATCTTAATCATGGGCTCCATGGGTaGCTGGGACTCACATGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WILGIEPGASERGESNLNHGLHG*LGLTWS Trigger: ACTCCATGTGAGTCCCAGCAACCCATGGAGCCCATG...ATTAAGATTACTTTCTCCTCTTTCAGAGGCCCCAGGTTCAATCCCTAGTATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACTCAGGAGTATTTTCTTaGGGAATGTCCTTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHSGVFS*GMSLFT Trigger: AGTGAACAAGGACATTCCCAAAGAAAATACTCCTGA...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGAAGACCTAAGTTCAGTTCCCAGCACCCAAGCCAGGCAGCTCACTCTCACAAGTATTTCCCAAGTTaGGGAAGCCTTCACGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CRRPKFSSQHPSQAAHSHKYFPS*GSLHVL Trigger: TAAAACGTGAAGGCTTCCCAAACTTGGGAAATACTT...GTGAGAGTGAGCTGCCTGGCTTGGGTGCTGGGAACTGAACTTAGGTCTTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | CCCACCCAAAGGGATAGCAACCCACAACCTGAGAACTCCTGTCCTAGACTAATCCAAGTCAGTGGTAACTaGGTAGCGTTTCAGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PTQRDSNPQPENSCPRLIQVSGN*VAFQMN Trigger: GTTCATCTGAAACGCTACCAAGTTACCACTGACTTG...GATTAGTCTAGGACAGGAGTTCTCAGGTTGTGGGTTGCTATCCCTTTGGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | CCCACCCAAAGGGATAGCAACCCACAACCTGAGAACTCCTGTCCTAGACTAATCCCCATCTCCCCATCTTaGGAATCATCAGAACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PTQRDSNPQPENSCPRLIPISPS*ESSEPN Trigger: ATTTGGTTCTGATGATTCCAAAGATGGGGAGATGGG...GATTAGTCTAGGACAGGAGTTCTCAGGTTGTGGGTTGCTATCCCTTTGGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | AACACTTGTATGATGGTTTGCACACGGATGCATGCACATGTGAAAGCCAGAAGAATAGAAAGTGGCATCTaGCGGGACAGTGGTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NTCMMVCTRMHAHVKARRIESGI*RDSGVP Trigger: TGGGACACCACTGTCCCGCAAGATGCCACTTTCTAT...TCTTCTGGCTTTCACATGTGCATGCATCCGTGTGCAAACCATCATACAAGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TCCCATGCCTCCTGTCTCCAAGGACACATGCGCTCACACCTAACACAGGTATTGTCAGGAGTATTTTCTTaGGGAATGTCCTTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SHASCLQGHMRSHLTQVLSGVFS*GMSLFT Trigger: AGTGAACAAGGACATTCCCAAAGAAAATACTCCTGA...CAATACCTGTGTTAGGTGTGAGCGCATGTGTCCTTGGAGACAGGAGGCATGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | AACACTTGTATGATGGTTTGCACACGGATGCATGCACATGTGAAAGCCAGAAGAACAGCTTTCTCTGCTTaGCCGCCTCTGTTCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NTCMMVCTRMHAHVKARRTAFSA*PPLFLE Trigger: TTCCAGGAACAGAGGCGGCAAAGCAGAGAAAGCTGT...TCTTCTGGCTTTCACATGTGCATGCATCCGTGTGCAAACCATCATACAAGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS CCA 90 bp | CATCTCCCCATCTTTGGAATCATCAGAACCAAATGCAAAGGAATGTaGGTCATCTTCCTGCAATTCTGGAGACCTACTCAGGTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLPIFGIIRTKCKGM*VIFLQFWRPTQVLL Trigger: GAGAAGGACCTGAGTAGGTCTCCAGAATTGCAGGAAGATGACCCACATTCCTTTGCATTTGGTTCTGATGATTCCAAAGATGGGGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACTGTGCTTGCTCCTGTTaGTGCTGCGGATCTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: WFRTTFKKHHALLIRIAHCACSC*CCGSGP Trigger: TGGTCCAGATCCGCAGCACAAACAGGAGCAAGCACA...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATCATGGGCTCCATGGGTaGCTGGGACTCACATGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YSTISPDPYYVNKWYSQNHGLHG*LGLTWS Trigger: ACTCCATGTGAGTCCCAGCAACCCATGGAGCCCATG...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | CCCACCCAAAGGGATAGCAACCCACAACCTGAGAACTCCTGTCCTAGACTAATCAAGTATTTCCCAAGTTaGGGAAGCCTTCACGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PTQRDSNPQPENSCPRLIKYFPS*GSLHVL Trigger: TAAAACGTGAAGGCTTCCCAAACTTGGGAAATACTT...GATTAGTCTAGGACAGGAGTTCTCAGGTTGTGGGTTGCTATCCCTTTGGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTAGATGCCCTGGTGTGCTaGCTCCTGTTTGTGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TFKKHHALLIRIAHTLKLDALVC*LLFVLR Trigger: CCGCAGCACAAACAGGAGCAAGCACACCAGGGCATC...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATCGTAATGGCCTGAATTaGGGGAGCTCCCAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YSTISPDPYYVNKWYSQNRNGLN*GSSQSG Trigger: GCCACTTTGGGAGCTCCCCAAATTCAGGCCATTACG...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS GCA 90 bp | AAGATCATCTCCCATCTCCCCATCTTTGGAATCATCAGAACCAAATaGAAAGGAATGTGGGTCATCTTCCTGCAATTCTGGAGACCTACT | + |
|
Preference number: 5 (lower is better) Translates to: KIISHLPIFGIIRTK*KGMWVIFLQFWRPT Trigger: AGTAGGTCTCCAGAATTGCAGGAAGATGACCCACATTCCTTTGCATTTGGTTCTGATGATTCCAAAGATGGGGAGATGGGAGATGATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS CCA 90 bp | GCATGTAAAAGAAGATGTATCCGCTGTTTAGCCTGTTCTCCTGAATaGAGGGATCTGAACTCTCGAACACTTGGACATCACTGTAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ACKRRCIRCLACSPE*RDLNSRTLGHHCKG Trigger: TCCTTTACAGTGATGTCCAAGTGTTCGAGAGTTCAGATCCCTCCATTCAGGAGAACAGGCTAAACAGCGGATACATCTTCTTTTACATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS GCA 90 bp | GTTTTGATAGTAGCCTCACCACAGCCTTCACAGATGATGGAGCTATaGAGCTCAAATTCAAAATTAGCTCCAACGGGACAAACAAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLIVASPQPSQMMEL*SSNSKLAPTGQTNL Trigger: AAGGTTTGTTTGTCCCGTTGGAGCTAATTTTGAATTTGAGCTGCATAGCTCCATCATCTGTGAAGGCTGTGGTGAGGCTACTATCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS CCA 90 bp | CATCCTCATACATTATCTGGAAGCTTTGTATTTCAGCATCCACACTaGATCCAACCTGTAGAACCATGGGGTCACAGGATTCTGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: HPHTLSGSFVFQHPH*IQPVEPWGHRILKS Trigger: TGATTTCAGAATCCTGTGACCCCATGGTTCTACAGGTTGGATCCAGTGTGGATGCTGAAATACAAAGCTTCCAGATAATGTATGAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCATGCAAGACCTGGATCTaGGATGCTCAGAGGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SVRCFMSSFHLELCDSSSCKTWI*DAQRLT Trigger: TGTGAGCCTCTGAGCATCCAAGATCCAGGTCTTGCA...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTAATAGAAAGTGGCATCTaGCGGGACAGTGGTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TFKKHHALLIRIAHTLKLIESGI*RDSGVP Trigger: TGGGACACCACTGTCCCGCAAGATGCCACTTTCTAT...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATATAGAGGGTGTGTTTTaGTCCCATGGTGCAGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GGQLYDLIDESQTHMENNIEGVF*SHGAGQ Trigger: TTGACCTGCACCATGGGACAAAAACACACCCTCTAT...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACGATAACATTGACTGGTaGAAGATCCCAGGCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: WFRTTFKKHHALLIRIAHDNIDW*KIPGII Trigger: GATGATGCCTGGGATCTTCAACCAGTCAATGTTATC...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGGATACTAGGGATTGAACCTGGGGCCTCTGAAAGAGGAGAAAGTAATCTTAATGGTTCAAGTTTCCAATaGCTACGCTTTTCTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WILGIEPGASERGESNLNGSSFQ*LRFSCS Trigger: AGAACAAGAAAAGCGTAGCAATTGGAAACTTGAACC...ATTAAGATTACTTTCTCCTCTTTCAGAGGCCCCAGGTTCAATCCCTAGTATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGGTTCAGAACAACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACAGGGTCAGGAAGAGATaGGACTCCATTATGTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WFRTTFKKHHALLIRIAHRVRKR*DSIMCY Trigger: ATAACACATAATGGAGTCCAATCTCTTCCTGACCCT...GTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGTTGTTCTGAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TGGATACTAGGGATTGAACCTGGGGCCTCTGAAAGAGGAGAAAGTAATCTTAATCTCCTCAATGTGTACTaGAGAACAGAATTCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WILGIEPGASERGESNLNLLNVY*RTEFLF Trigger: GAACAAGAATTCTGTTCTCAAGTACACATTGAGGAG...ATTAAGATTACTTTCTCCTCTTTCAGAGGCCCCAGGTTCAATCCCTAGTATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATCAAGTCAGTGGTAACTaGGTAGCGTTTCAGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YSTISPDPYYVNKWYSQNQVSGN*VAFQMN Trigger: GTTCATCTGAAACGCTACCAAGTTACCACTGACTTG...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATGTAAAGGAGCCAGGCTaGCTTTTGAAAGTCATACAC | + |
|
Preference number: 5 (lower is better) Translates to: GGQLYDLIDESQTHMENNVKEPG*LLKVIH Trigger: GTGTATGACTTTCAAAAGCAAGCCTGGCTCCTTTAC...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATAGGGTCAGGAAGAGATaGGACTCCATTATGTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: YSTISPDPYYVNKWYSQNRVRKR*DSIMCY Trigger: ATAACACATAATGGAGTCCAATCTCTTCCTGACCCT...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATAGTCCTTTGCAAAGGTaGGAATCCCAAAGACAGATT | + |
|
Preference number: 5 (lower is better) Translates to: GGQLYDLIDESQTHMENNSPLQR*ESQRQI Trigger: AATCTGTCTTTGGGATTCCAACCTTTGCAAAGGACT...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCAACTATATGATCTCATCGATGAATCACAAACACACATGGAAAACAATCCATCATTGAGTCAGTaGCTAGTGATGTCTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGQLYDLIDESQTHMENNPSLSQ*LVMSFV Trigger: GACAAAAGACATCACTAGCAACTGACTCAATGATGG...ATTGTTTTCCATGTGTGTTTGTGATTCATCGATGAGATCATATAGTTGCCCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS TCA 90 bp | GGAATGACTTCAAATGTTCAACATCTGCAGAGGATAACTTGTCGATaGGTAAGGATGTGTCGTCTCTCAAAGTTAAATCCAGATGATACA | + |
|
Preference number: 5 (lower is better) Translates to: GMTSNVQHLQRITCR*VRMCRLSKLNPDDT Trigger: TGTATCATCTGGATTTAACTTTGAGAGACGACACATCCTTACTCATCGACAAGTTATCCTCTGCAGATGTTGAACATTTGAAGTCATTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATGGTTCAAGTTTCCAATaGCTACGCTTTTCTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YSTISPDPYYVNKWYSQNGSSFQ*LRFSCS Trigger: AGAACAAGAAAAGCGTAGCAATTGGAAACTTGAACC...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TACTCCACCATCTCTCCAGATCCCTATTACGTTAACAAATGGTACTCTCAAAATTCTCCAGTCCAAATATaGATACATCTCTGTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: YSTISPDPYYVNKWYSQNSPVQI*IHLCHQ Trigger: CTGATGACAGAGATGTATCAATATTTGGACTGGAGA...ATTTTGAGAGTACCATTTGTTAACGTAATAGGGATCTGGAGAGATGGTGGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | TCCGTTCGTTGTTTTATGTCAAGTTTTCATCTTGAGCTATGTGACTCTTCTTCACATTATCTGGAAGCTTaGTATTTCAGCATCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: SVRCFMSSFHLELCDSSSHYLEA*YFSIHT Trigger: AGTGTGGATGCTGAAATACAAAGCTTCCAGATAATG...TGAAGAAGAGTCACATAGCTCAAGATGAAAACTTGACATAAAACAACGAACGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS-3UTR CAA 90 bp | ACGTTTAAAAAGCATCATGCTTTGCTCATACGGATAGCACACACACTAAAATTACTCCTCAATGTGTACTaGAGAACAGAATTCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFKKHHALLIRIAHTLKLLLNVY*RTEFLF Trigger: GAACAAGAATTCTGTTCTCAAGTACACATTGAGGAG...TAATTTTAGTGTGTGTGCTATCCGTATGAGCAAAGCATGATGCTTTTTAAACGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS CCA 72 bp | GCATCTTGCGGGACAGTGGTGTCCCACTTTCTGGAGTaGTATTCAGGGATCCACAGGCTGCCTCCTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASCGTVVSHFLE*YSGIHRLPPGA Trigger: AGCACCAGGAGGCAGCCTGTGGATCCCTGAATACCACTCCAGAAAGTGGGACACCACTGTCCCGCAAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS CCA 72 bp | AAGTGGCATCTTGCGGGACAGTGGTGTCCCACTTTCTaGAGTGGTATTCAGGGATCCACAGGCTGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KWHLAGQWCPTF*SGIQGSTGCLL Trigger: CAGGAGGCAGCCTGTGGATCCCTGAATACCACTCCAGAAAGTGGGACACCACTGTCCCGCAAGATGCCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS GCA 72 bp | AGGCTGCCTCCTGGTGCTCCCCGCAAAATGGATCACTaGTTTCAAGGTCATCCTGACTACTCATGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLPPGAPRKMDH*FQGHPDYSWAP Trigger: TGGAGCCCATGAGTAGTCAGGATGACCTTGAAAGCAGTGATCCATTTTGCGGGGAGCACCAGGAGGCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS GCA 72 bp | GGAGTGGTATTCAGGGATCCACAGGCTGCCTCCTGGTaGTCCCCGCAAAATGGATCACTGCTTTCAAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GVVFRDPQAASW*SPQNGSLLSRS Trigger: TGACCTTGAAAGCAGTGATCCATTTTGCGGGGAGCACCAGGAGGCAGCCTGTGGATCCCTGAATACCACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS GCA 72 bp | GGCTCCAGCATGGAGCCACTTTCCAGGCCTCTCTGCTaGTGCTCCTCACTTGCATCTTCATCCTCATACATT | + |
|
Preference number: 6 (lower is better) Translates to: GSSMEPLSRPLC*CSSLASSSSYI Trigger: AATGTATGAGGATGAAGATGCAAGTGAGGAGCAGCAGCAGAGAGGCCTGGAAAGTGGCTCCATGCTGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS CCA 72 bp | GGATCCACAGGCTGCCTCCTGGTGCTCCCCGCAAAATaGATCACTGCTTTCAAGGTCATCCTGACTACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSTGCLLVLPAK*ITAFKVILTTH Trigger: ATGAGTAGTCAGGATGACCTTGAAAGCAGTGATCCATTTTGCGGGGAGCACCAGGAGGCAGCCTGTGGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS CAA 90 bp | CTCAACTGGCTGCTCACTCTTCACTGGCAACAAGTCAGTGGTAACTaGGTAGCGTTTCAGATGAACAATGAGGACCCTGGGGAGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LNWLLTLHWQQVSGN*VAFQMNNEDPGESP Trigger: AGGAGACTCCCCAGGGTCCTCATTGTTCATCTGAAACGCTACCAAGTTACCACTGACTTGTTGCCAGTGAAGAGTGAGCAGCCAGTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS GCA 72 bp | TCCAGCATGGAGCCACTTTCCAGGCCTCTCTGCTGCTaGTCCTCACTTGCATCTTCATCCTCATACATTATC | + |
|
Preference number: 6 (lower is better) Translates to: SSMEPLSRPLCC*SSLASSSSYII Trigger: GATAATGTATGAGGATGAAGATGCAAGTGAGGAGCAGCAGCAGAGAGGCCTGGAAAGTGGCTCCATGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS CAA 72 bp | TTCAAGGTCATCCTGACTACTCATGGGCTCCATGGGTaGCTGGGACTCACATGGAGTAGACGAATCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: FKVILTTHGLHG*LGLTWSRRIQE Trigger: TTCCTGGATTCGTCTACTCCATGTGAGTCCCAGCAACCCATGGAGCCCATGAGTAGTCAGGATGACCTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
||
| CDS CAA 90 bp | ATTCTCTGGAACCTCTTGAAGACCCATCTCTGCAAGACCTGGATCTaGGATGCTCAGAGGCTCACAGAGCATAGGAAGGAAGCTGTATCC | + |
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Preference number: 6 (lower is better) Translates to: ILWNLLKTHLCKTWI*DAQRLTEHRKEAVS Trigger: GGATACAGCTTCCTTCCTATGCTCTGTGAGCCTCTGAGCATCCAAGATCCAGGTCTTGCAGAGATGGGTCTTCAAGAGGTTCCAGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS TCA 72 bp | TTGTTTTTCTCCTCTCTTTTGGCCGCCCGTGGTGTTTaGCATAGAAAGTGGCATCTTGCGGGACAGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: LFFSSLLAARGV*HRKWHLAGQWC Trigger: ACACCACTGTCCCGCAAGATGCCACTTTCTATGTCAAACACCACGGGCGGCCAAAAGAGAGGAGAAAAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS GCA 72 bp | TTCTGGATTCTCTGGAACCTCTTGAAGACCCATCTCTaGAAGACCTGGATCTTGGATGCTCAGAGGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: FWILWNLLKTHL*KTWILDAQRLT Trigger: TGTGAGCCTCTGAGCATCCAAGATCCAGGTCTTGCAGAGATGGGTCTTCAAGAGGTTCCAGAGAATCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS CCA 72 bp | TTCCTGCAATTCTGGAGACCTACTCAGGTCCTTCTCTaGGTCTTCCTGAGAACTAACACTTGCAAGGGATGC | + |
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Preference number: 6 (lower is better) Translates to: FLQFWRPTQVLL*VFLRTNTCKGC Trigger: GCATCCCTTGCAAGTGTTAGTTCTCAGGAAGACCCAGAGAAGGACCTGAGTAGGTCTCCAGAATTGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS TCA 72 bp | CATCGTAGGAGACTTTCTCCCATGGGATGCCTTGAGTaGGTAAGTCCTTTGCAAAGGTTGGAATCCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: HRRRLSPMGCLE*VSPLQRLESQR Trigger: TCTTTGGGATTCCAACCTTTGCAAAGGACTTACTCACTCAAGGCATCCCATGGGAGAAAGTCTCCTACGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS GCA 72 bp | GTAGCCTCACCACAGCCTTCACAGATGATGGAGCTATaGAGCTCAAATTCAAAATTAGCTCCAACGGGACAA | + |
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Preference number: 6 (lower is better) Translates to: VASPQPSQMMEL*SSNSKLAPTGQ Trigger: TTGTCCCGTTGGAGCTAATTTTGAATTTGAGCTGCATAGCTCCATCATCTGTGAAGGCTGTGGTGAGGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS CCA 72 bp | AGAAGATGTATCCGCTGTTTAGCCTGTTCTCCTGAATaGAGGGATCTGAACTCTCGAACACTTGGACATCAC | + |
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Preference number: 6 (lower is better) Translates to: RRCIRCLACSPE*RDLNSRTLGHH Trigger: GTGATGTCCAAGTGTTCGAGAGTTCAGATCCCTCCATTCAGGAGAACAGGCTAAACAGCGGATACATCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS TCA 72 bp | AACATTGACTGGTTGAAGATCCCAGGCATCATCCCTTaGGAGACATCTGGGGATGTATTAGCCAAGGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: NIDWLKIPGIIP*ETSGDVLAKGN Trigger: ATTTCCCTTGGCTAATACATCCCCAGATGTCTCTCAAGGGATGATGCCTGGGATCTTCAACCAGTCAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS TCA 72 bp | CTTTTGAAAGTCATACACATCACTTACGTAATGGCCTaGATTTGGGGAGCTCCCAAAGTGGCTGACCACACT | + |
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Preference number: 6 (lower is better) Translates to: LLKVIHITYVMA*IWGAPKVADHT Trigger: AGTGTGGTCAGCCACTTTGGGAGCTCCCCAAATTCAGGCCATTACGTAAGTGATGTGTATGACTTTCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS GCA 72 bp | AGGAGTATTTTCTTTGGGAATGTCCTTGTTCACTTCTaGGCTGGAGGAGGATGGTTCTGTCTTCCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RSIFFGNVLVHF*AGGGWFCLPLS Trigger: AGAAAGAGGAAGACAGAACCATCCTCCTCCAGCGCAGAAGTGAACAAGGACATTCCCAAAGAAAATACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS CCA 72 bp | ATACTTAGAAATCTCAACTGGCTGCTCACTCTTCACTaGCAACAAGTCAGTGGTAACTTGGTAGCGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ILRNLNWLLTLH*QQVSGNLVAFQ Trigger: CTGAAACGCTACCAAGTTACCACTGACTTGTTGCCAGTGAAGAGTGAGCAGCCAGTTGAGATTTCTAAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS CCA 72 bp | TGCTCCTCACTTGCATCTTCATCCTCATACATTATCTaGAAGCTTTGTATTTCAGCATCCACACTGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: CSSLASSSSYII*KLCISASTLDP Trigger: TGGATCCAGTGTGGATGCTGAAATACAAAGCTTCCAGATAATGTATGAGGATGAAGATGCAAGTGAGGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS CAA 72 bp | ACAATGAGGACCCTGGGGAGTCTCCTCAATGTGTACTaGAGAACAGAATTCTTGTTCTTACATTTCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: TMRTLGSLLNVY*RTEFLFLHFSQ Trigger: CTGTGAGAAATGTAAGAACAAGAATTCTGTTCTCAAGTACACATTGAGGAGACTCCCCAGGGTCCTCATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS CAA 72 bp | ATGTCCCTCTTTTCCTCCTTAGATGTGCTAAGGACCTaGCACTCAGATGCCTTTTTCAACAGTTCCTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: MSLFSSLDVLRT*HSDAFFNSSSK Trigger: TTTTGAGGAACTGTTGAAAAAGGCATCTGAGTGCAAGGTCCTTAGCACATCTAAGGAGGAAAAGAGGGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS CAA 90 bp | GTTAATTTTCTCATAGTTCTTAAATTCTGGATTCTCTGGAACCTCTaGAAGACCCATCTCTGCAAGACCTGGATCTTGGATGCTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VNFLIVLKFWILWNL*KTHLCKTWILDAQR Trigger: CCTCTGAGCATCCAAGATCCAGGTCTTGCAGAGATGGGTCTTCAAGAGGTTCCAGAGAATCCAGAATTTAAGAACTATGAGAAAATTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS TCA 72 bp | GACTCCATTATGTGTTATGATCTCCAGTCCAAATATTaGTACATCTCTGTCATCAGAGCATGTCGCGATTGG | + |
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Preference number: 6 (lower is better) Translates to: DSIMCYDLQSKY*YISVIRACRDW Trigger: CCAATCGCGACATGCTCTGATGACAGAGATGTATCAATATTTGGACTGGAGATCATAACACATAATGGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS TCA 72 bp | TTCTTCCAGGATGTATGTAAGGCCGTTAAGCAATGTTaGGAAGTAATCTATGTCCCTCTTTTCCTCCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: FFQDVCKAVKQC*EVIYVPLFLLR Trigger: TCTAAGGAGGAAAAGAGGGACATAGATTACTTCTCAACATTGCTTAACGGCCTTACATACATCCTGGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS TCA 72 bp | TCAAATGTTCAACATCTGCAGAGGATAACTTGTCGATaGGTAAGGATGTGTCGTCTCTCAAAGTTAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: SNVQHLQRITCR*VRMCRLSKLNP Trigger: TGGATTTAACTTTGAGAGACGACACATCCTTACTCATCGACAAGTTATCCTCTGCAGATGTTGAACATTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS TCA 72 bp | AAGGGTCAGGAAGAGATTGGACTCCATTATGTGTTATaGTCTCCAGTCCAAATATTGATACATCTCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: KGQEEIGLHYVL*SPVQILIHLCH Trigger: ATGACAGAGATGTATCAATATTTGGACTGGAGATCATAACACATAATGGAGTCCAATCTCTTCCTGACCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS CAA 72 bp | AATGACTTCAAATGTTCAACATCTGCAGAGGATAACTaGTCGATGAGTAAGGATGTGTCGTCTCTCAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: NDFKCSTSAEDN*SMSKDVSSLKV Trigger: AACTTTGAGAGACGACACATCCTTACTCATCGACAAGTTATCCTCTGCAGATGTTGAACATTTGAAGTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054055.7 ENSMUST00000197117.5 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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| CDS CAA 72 bp | GGGAGTCTCCTCAATGTGTACTTGAGAACAGAATTCTaGTTCTTACATTTCTCACAGTTATGCTCAATTTTT | + |
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Preference number: 6 (lower is better) Translates to: GSLLNVYLRTEF*FLHFSQLCSIF Trigger: AAAAATTGAGCATAACTGTGAGAAATGTAAGAACAAGAATTCTGTTCTCAAGTACACATTGAGGAGACTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054055.7 ENSMUST00000198068.3 ENSMUST00000200535.6 |
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