Pregenerated sensors for USP27X (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046269Ensembl transcript IDs: ENSMUST00000115744.2, ENSMUST00000178293.9, ENSMUST00000191497.2
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGCTAGGAGATATAGCTCAGGGGCAGAGTGCTTGCCTAGCACATaGAAGGCCCTGGGTTCAACCCTCTCTCCAGGCTGCTCTGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: CARRYSSGAECLPST*KALGSTLSPGCSVQ Trigger: CTGGACAGAGCAGCCTGGAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTATATCTCCTAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR GCA 90 bp | TCACAAGGACTCAGATGTGCTAGGAGATATAGCTCAGGGGCAGAGTaGTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SQGLRCARRYSSGAE*LPSTCKALGSTLSP Trigger: TGGAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTATATCTCCTAGCACATCTGAGTCCTTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR TCA 90 bp | CTGCTCTGTCCAGTGGAGCAAGCCATTCTGCCAGCATCGCTAAGCTaGTGGAGCCCCGAATTTTGGAAGTCTTCTGATCTCTGCTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LLCPVEQAILPASLS*WSPEFWKSSDLCLL Trigger: CAGCAAGCAGAGATCAGAAGACTTCCAAAATTCGGGGCTCCATCAGCTTAGCGATGCTGGCAGAATGGCTTGCTCCACTGGACAGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR TCA 90 bp | CATGCCCTGGGGAGAATTAAGATTGATCTTGTTTATGACTGCATGTaGCATGGTGGTGTCATTTCTGTCCACAGGTCTCAGGTGGGATTG | + |
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Preference number: 1 (lower is better) Translates to: HALGRIKIDLVYDCM*HGGVISVHRSQVGL Trigger: CAATCCCACCTGAGACCTGTGGACAGAAATGACACCACCATGTCACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR GCA 90 bp | TGCTTATCTTACAGCATTTCTAGCCCTCTCTACTTTTGGAGCATCTaGCGCTCCCCTTCCATAAGCCTGGTTATTTCTTCTTTCGCTAGC | + |
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Preference number: 1 (lower is better) Translates to: CLSYSISSPLYFWSI*RSPSISLVISSFAS Trigger: GCTAGCGAAAGAAGAAATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCTAGAAATGCTGTAAGATAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CCA 90 bp | GACACTGATTATGGTGGCCTATACACAACAGTGGGGTCCATGCCCTaGGGAGAATTAAGATTGATCTTGTTTATGACTGCATGTGACATG | + |
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Preference number: 1 (lower is better) Translates to: DTDYGGLYTTVGSMP*GELRLILFMTACDM Trigger: CATGTCACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCACTGTTGTGTATAGGCCACCATAATCAGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR GCA 90 bp | ATACACACACACCTACACTGTCAGCTGAGGCCTGTCCTTGTTAATTaGTTATCTTACAGCATTTCTAGCCCTCTCTACTTTTGGAGCATC | + |
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Preference number: 1 (lower is better) Translates to: IHTHLHCQLRPVLVN*LSYSISSPLYFWSI Trigger: GATGCTCCAAAAGTAGAGAGGGCTAGAAATGCTGTAAGATAAGCAATTAACAAGGACAGGCCTCAGCTGACAGTGTAGGTGTGTGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CCA 90 bp | ACATGTGGCTGTTACATGATTGGTCAATTGAAGCTGAGACACCCATaGAGAAAGATGTTTTACAGTTACAAGGGCACACACACACCCCAA | + |
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Preference number: 1 (lower is better) Translates to: TCGCYMIGQLKLRHP*RKMFYSYKGTHTPQ Trigger: TTGGGGTGTGTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGACCAATCATGTAACAGCCACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR TCA 90 bp | CACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATaGGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCATGT | + |
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Preference number: 1 (lower is better) Translates to: HKNHEYKETGKGVCQ*DILASSMSLLSSPC Trigger: ACATGGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR GCA 90 bp | GCAAAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTaGTTTCATCCCCATGTACACAATGGGCTACATTTTAAGAAACTT | + |
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Preference number: 1 (lower is better) Translates to: AKVFVNEISSPPPCL*FHPHVHNGLHFKKL Trigger: AAGTTTCTTAAAATGTAGCCCATTGTGTACATGGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR TCA 90 bp | GCACATGCAAGGCCCTGGGTTCAACCCTCTCTCCAGGCTGCTCTGTCCAGTGGACCAGCATCGCTAAGCTaGTGGAGCCCCGAATTTTGG | + |
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Preference number: 2 (lower is better) Translates to: AHARPWVQPSLQAALSSGPASLS*WSPEFW Trigger: CCAAAATTCGGGGCTCCATCAGCTTAGCGATGCTGG...TCCACTGGACAGAGCAGCCTGGAGAGAGGGTTGAACCCAGGGCCTTGCATGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CAA 90 bp | CAAGGACTCAGATGTGCTAGGAGATATAGCTCAGGGGCAGAGTGCTaGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTCTCTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QGLRCARRYSSGAEC*PSTCKALGSTLSPG Trigger: GCCTGGAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTATATCTCCTAGCACATCTGAGTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTCTCTCCTGCATGTGACATGGTaGTGTCATTTCTGTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: QGQSACLAHARPWVQPSLLHVTW*CHFCPQ Trigger: CTGTGGACAGAAATGACACCACCATGTCACATGCAG...GAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTCTCTCATTTTGGAAGTCTTCTaGTCTCTGCTTGCTGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: QGQSACLAHARPWVQPSLILEVF*SLLAGK Trigger: TTTACCAGCAAGCAGAGATCAGAAGACTTCCAAAAT...GAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | GATGTGCTAGGAGATATAGCTCAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGGTGGGGTCCATGCCCTaGGGAGAATTAAGATTGATC | + |
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Preference number: 2 (lower is better) Translates to: DVLGDIAQGQSACLAHARVGSMP*GELRLI Trigger: GATCAATCTTAATTCTCCCCAGGGCATGGACCCCAC...CCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTATATCTCCTAGCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTCTCTACTTTTGGAGCATCTGCCGCTCCCCTTCCATAAGCCTGGTTATTAAAGGTGTTTGTCAATaGGATATCCTCGCCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPLYFWSICRSPSISLVIKGVCQ*DILASS Trigger: GGAGGAGGCGAGGATATCTCATTGACAAACACCTTT...AATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTCTCTCCCTGTCCTTGTTAATTaGTTATCTTACAGCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: QGQSACLAHARPWVQPSLPVLVN*LSYSIS Trigger: AGAAATGCTGTAAGATAAGCAATTAACAAGGACAGG...GAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGCTCAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCCCTGTCCTTGTTAATTaGTTATCTTACAGCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: IAQGQSACLAHARPWVQPPVLVN*LSYSIS Trigger: AGAAATGCTGTAAGATAAGCAATTAACAAGGACAGG...GGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTGCTAGGAGATATAGCTCAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGAGAGGTTCACTGATTTaGTCAAGTACATCATACAGC | + |
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Preference number: 2 (lower is better) Translates to: DVLGDIAQGQSACLAHARRGSLI*SSTSYS Trigger: GCTGTATGATGTACTTGAGCAAATCAGTGAACCTCT...CCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTATATCTCCTAGCACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CAA 90 bp | GGCCTATACACAACAGTGGGGTCCATGCCCTGGGGAGAATTAAGATaGATCTTGTTTATGACTGCATGTGACATGGTGGTGTCATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GLYTTVGSMPWGELR*ILFMTACDMVVSFL Trigger: CAGAAATGACACCACCATGTCACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCACTGTTGTGTATAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CAA 90 bp | TACACAACAGTGGGGTCCATGCCCTGGGGAGAATTAAGATTGATCTaGTTTATGACTGCATGTGACATGGTGGTGTCATTTCTGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: YTTVGSMPWGELRLI*FMTACDMVVSFLST Trigger: TGTGGACAGAAATGACACCACCATGTCACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCACTGTTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTGGCAAAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTAAATCTCGATGCCTaGTGTAGTACTGGTGTCATC | + |
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Preference number: 2 (lower is better) Translates to: KLAKVFVNEISSPPPCLCLNLDA*CSTGVI Trigger: GATGACACCAGTACTACACCAGGCATCGAGATTTAA...GCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCTTAAATCTCGATGCCTaGTGTAGTACTGGTGTCATC | + |
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Preference number: 2 (lower is better) Translates to: KVFVNEISSPPPCLCFHPLNLDA*CSTGVI Trigger: GATGACACCAGTACTACACCAGGCATCGAGATTTAA...GGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCATGTACACAAGCTGAGACACCCATaGAGAAAGATGTTTTACAGT | + |
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Preference number: 2 (lower is better) Translates to: VNEISSPPPCLCFHPHVHKLRHP*RKMFYS Trigger: ACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTT...GTGTACATGGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGTCCATGCCCTGGGGAGAATTAAGATTGATCTTGTTTATGACTGCATGTACCTCCGATACATTCTaGCCCAGTCCAAATAAAATT | + |
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Preference number: 2 (lower is better) Translates to: VGSMPWGELRLILFMTACTSDTF*PSPNKI Trigger: AATTTTATTTGGACTGGGCCAGAATGTATCGGAGGT...ACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCCAGTAAATGTTTTAAGTACCTGCTCGTTATATGCCAGGAACTATGTGCCTATCGGGTGGATGCCTaGGTCATTAAAACAATGTCA | + |
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Preference number: 2 (lower is better) Translates to: PSSKCFKYLLVICQELCAYRVDA*VIKTMS Trigger: TGACATTGTTTTAATGACTCAGGCATCCACCCGATA...GGCACATAGTTCCTGGCATATAACGAGCAGGTACTTAAAACATTTACTGGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR GCA 90 bp | TCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACCATCCAGAACACTCCTaGCACTTAATTTCCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: SIEAETPMEKDVLQLQGHHPEHS*HLISFT Trigger: TGTGAAGGAAATTAAGTGGCAGGAGTGTTCTGGATG...GTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CAA 90 bp | TTCATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTaGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATC | + |
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Preference number: 2 (lower is better) Translates to: FIAQKSRIQRNWQRC*SMRYPRLLHVSAFI Trigger: GATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGACCTCCTCCATGTCTCTaGTTTCATCCCCATGTACAC | + |
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Preference number: 2 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRPPPCL*FHPHVH Trigger: GTGTACATGGGGATGAAAGCAGAGACATGGAGGAGG...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGTGGCTGTTACATGATTGGTCAATTGAAGCTGAGACACCCATGGAGAAAGGACTTTTTGGGACACTaGATACTGTTCAATTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: TCGCYMIGQLKLRHPWRKDFLGH*ILFNSY Trigger: GTAAGAATTGAACAGTATCCAGTGTCCCAAAAAGTC...CTTTCTCCATGGGTGTCTCAGCTTCAATTGACCAATCATGTAACAGCCACATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACTCCCACACAATCTTTTaGAGGAATATAGGATATGAA | + |
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Preference number: 2 (lower is better) Translates to: LKLRHPWRKMFYSYKGTHSHTIF*RNIGYE Trigger: TTCATATCCTATATTCCTCCAAAAGATTGTGTGGGA...GTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CAA 90 bp | AGAGCCAACAAACAGTTTACTGAGTCTCTACAAAGTTCCAAGCCTTaGACTTTGACACATTGTATATCATTTATCTTTAACAGCGACCCT | + |
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Preference number: 2 (lower is better) Translates to: RANKQFTESLQSSKP*TLTHCISFIFNSDP Trigger: AGGGTCGCTGTTAAAGATAAATGATATACAATGTGTCAAAGTCAAAGGCTTGGAACTTTGTAGAGACTCAGTAAACTGTTTGTTGGCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATACTGATCAGGACTTTTTaGGACACTGGATACTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: STKITNTKKLAKVFVNEILIRTF*DTGYCS Trigger: TGAACAGTATCCAGTGTCCCAAAAAGTCCTGATCAG...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATAAAGCTGAGACACCCATaGAGAAAGATGTTTTACAGT | + |
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Preference number: 2 (lower is better) Translates to: STKITNTKKLAKVFVNEIKLRHP*RKMFYS Trigger: ACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTT...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CAA 90 bp | AACAAACAGTTTACTGAGTCTCTACAAAGTTCCAAGCCTTTGACTTaGACACATTGTATATCATTTATCTTTAACAGCGACCCTTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: NKQFTESLQSSKPLT*THCISFIFNSDPLR Trigger: CCTTAAAGGGTCGCTGTTAAAGATAAATGATATACAATGTGTCAAAGTCAAAGGCTTGGAACTTTGTAGAGACTCAGTAAACTGTTTGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGAGACTTTTTGGGACACTaGATACTGTTCAATTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRDFLGH*ILFNSY Trigger: GTAAGAATTGAACAGTATCCAGTGTCCCAAAAAGTC...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATCCCACACAATCTTTTaGAGGAATATAGGATATGAA | + |
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Preference number: 2 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRSHTIF*RNIGYE Trigger: TTCATATCCTATATTCCTCCAAAAGATTGTGTGGGA...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCCACACAATCTTTTaGAGGAATATAGGATATGAA | + |
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Preference number: 2 (lower is better) Translates to: STKITNTKKLAKVFVNEISHTIF*RNIGYE Trigger: TTCATATCCTATATTCCTCCAAAAGATTGTGTGGGA...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTCTCTCTCTTCTGATCTCTGCTaGCTGGTAAATACTGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: QGQSACLAHARPWVQPSLSSDLC*LVNTGA Trigger: AGCTCCAGTATTTACCAGCAAGCAGAGATCAGAAGA...GAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR-3UTR CAA 90 bp | GCACATGCAAGGCCCTGGGTTCAACCCTCTCTCCAGGCTGCTCTGTCCAGTGGACAAAGTTCCAAGCCTTaGACTTTGACACATTGTATA | + |
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Preference number: 3 (lower is better) Translates to: AHARPWVQPSLQAALSSGQSSKP*TLTHCI Trigger: TATACAATGTGTCAAAGTCAAAGGCTTGGAACTTTG...TCCACTGGACAGAGCAGCCTGGAGAGAGGGTTGAACCCAGGGCCTTGCATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR TCA 72 bp | CATCCAGAACACTCCTGCCACTTAATTTCCTTCACATaGCTGCTTAGGCTAGAGCCTCTTCTCCCTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: HPEHSCHLISFT*LLRLEPLLPPL Trigger: GAGGGGAGGGAGAAGAGGCTCTAGCCTAAGCAGTCATGTGAAGGAAATTAAGTGGCAGGAGTGTTCTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CCA 72 bp | GTGGTGTCATTTCTGTCCACAGGTCTCAGGTGGGATTaGTATTCACCTCCGATACATTCTGGCCCAGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: VVSFLSTGLRWD*YSPPIHSGPVQ Trigger: TTGGACTGGGCCAGAATGTATCGGAGGTGAATACCAATCCCACCTGAGACCTGTGGACAGAAATGACACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| 3UTR CCA 72 bp | GACATGGTGGTGTCATTTCTGTCCACAGGTCTCAGGTaGGATTGGTATTCACCTCCGATACATTCTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DMVVSFLSTGLR*DWYSPPIHSGP Trigger: TGGGCCAGAATGTATCGGAGGTGAATACCAATCCCACCTGAGACCTGTGGACAGAAATGACACCACCATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCTACATGATTGGTCAATaGAAGCTGAGACACCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: RCLSMRYPRLLHVSAFIPYMIGQ*KLRHPW Trigger: CCATGGGTGTCTCAGCTTCAATTGACCAATCATGTA...GGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR TCA 72 bp | GCTGGTAAATACTGGAGCTACGCTCACAATGCTTTCTaGAGGCACAACAAAACACCCCAAACCACCAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: AGKYWSYAHNAF*RHNKTPQTTKH Trigger: GTGTTTGGTGGTTTGGGGTGTTTTGTTGTGCCTTCAGAAAGCATTGTGAGCGTAGCTCCAGTATTTACCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR GCA 72 bp | TACAGCATTTCTAGCCCTCTCTACTTTTGGAGCATCTaGCGCTCCCCTTCCATAAGCCTGGTTATTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YSISSPLYFWSI*RSPSISLVISS Trigger: AGAAGAAATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCTAGAAATGCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR GCA 72 bp | AGATGTAACCCAGGATCCAAAAGAAACCGCTGCTCCTaGCTTCACAAGGACTCAGATGTGCTAGGAGATATA | + |
|
Preference number: 3 (lower is better) Translates to: RCNPGSKRNRCS*LHKDSDVLGDI Trigger: TATATCTCCTAGCACATCTGAGTCCTTGTGAAGGCAGGAGCAGCGGTTTCTTTTGGATCCTGGGTTACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CCA 72 bp | TATGGTGGCCTATACACAACAGTGGGGTCCATGCCCTaGGGAGAATTAAGATTGATCTTGTTTATGACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: YGGLYTTVGSMP*GELRLILFMTA Trigger: TGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCACTGTTGTGTATAGGCCACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR TCA 72 bp | CACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATaGGATATCCTCGCCTCCTCCATGTCTCTGCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HEYKETGKGVCQ*DILASSMSLLS Trigger: TGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGGTCCATGCCCTGGGGAGAATTAAGATTGATCTTGTTTATGACTGCATGTAAGAGGTTCACTGATTaGCTCAAGTACATCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: VGSMPWGELRLILFMTACKRFTD*LKYIIQ Trigger: CTGTATGATGTACTTGAGCAAATCAGTGAACCTCTT...ACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR TCA 72 bp | GGGAGAATTAAGATTGATCTTGTTTATGACTGCATGTaGCATGGTGGTGTCATTTCTGTCCACAGGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRIKIDLVYDCM*HGGVISVHRSQ Trigger: CTGAGACCTGTGGACAGAAATGACACCACCATGTCACATGCAGTCATAAACAAGATCAATCTTAATTCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR GCA 72 bp | TTTCTAAAGGGACAAAATGTGATAGTTGTGCTCCTCTaGCCCCAATCAATCAGAGGTATGACACTGATTATG | + |
|
Preference number: 3 (lower is better) Translates to: FLKGQNVIVVLL*PQSIRGMTLIM Trigger: CATAATCAGTGTCATACCTCTGATTGATTGGGGGCAGAGGAGCACAACTATCACATTTTGTCCCTTTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CCA 72 bp | TGTTACATGATTGGTCAATTGAAGCTGAGACACCCATaGAGAAAGATGTTTTACAGTTACAAGGGCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: CYMIGQLKLRHP*RKMFYSYKGTH Trigger: GTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGACCAATCATGTAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATACATGATTGGTCAATaGAAGCTGAGACACCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRYMIGQ*KLRHPW Trigger: CCATGGGTGTCTCAGCTTCAATTGACCAATCATGTA...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CCA 72 bp | CATTTCATAGCACAAAAATCACGAATACAAAGAAACTaGCAAAGGTGTTTGTCAATGAGATATCCTCGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HFIAQKSRIQRN*QRCLSMRYPRL Trigger: GAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTATGAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTCTCTCTACAGTGGTTGGGGTTaGTGGCCACCTTGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGQSACLAHARPWVQPSLYSGWG*WPPCQH Trigger: ATGTTGGCAAGGTGGCCAGCAACCCCAACCACTGTA...GAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTGGTGTAGTACTGGTGTCATCTTCCATTCTAGGTAGGCCTGTGTGGTGCCCCTGTGGTGCCGAATaGAGCTGGTGTAGTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MPGVVLVSSSILGRPVWCPCGAE*SWCSGH Trigger: GTGGCCACTACACCAGCTTCATTCGGCACCACAGGG...GCACCACACAGGCCTACCTAGAATGGAAGATGACACCAGTACTACACCAGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CAA 72 bp | AGATGTGCTAGGAGATATAGCTCAGGGGCAGAGTGCTaGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCARRYSSGAEC*PSTCKALGSTL Trigger: GAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTATATCTCCTAGCACATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTCTCTCGGCAACTACCACACTTaGTTTTGGCACTACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QGQSACLAHARPWVQPSLGNYHT*FWHYFL Trigger: TAGGAAGTAGTGCCAAAATCAAGTGTGGTAGTTGCC...GAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | ATAGCTCAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCGTTCTAGTTCAGGTTTaGTCGTTTCCCAGGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IAQGQSACLAHARPWVQPVLVQV*SFPRWD Trigger: ATCCCACCTGGGAAACGACCAAACCTGAACTAGAAC...GGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCCCTGTGGTGCCGAATaGAGCTGGTGTAGTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVFVNEISSPPPCLCFHPPCGAE*SWCSGH Trigger: GTGGCCACTACACCAGCTTCATTCGGCACCACAGGG...GGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | GCACATGCAAGGCCCTGGGTTCAACCCTCTCTCCAGGCTGCTCTGTCCAGTGGATTCAAGGCTTCTCCTTaGTCTTCTTTGGCAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHARPWVQPSLQAALSSGFKASP*SSLAIC Trigger: GCAAATTGCCAAAGAAGAGCAAGGAGAAGCCTTGAA...TCCACTGGACAGAGCAGCCTGGAGAGAGGGTTGAACCCAGGGCCTTGCATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTCTCTACTTTTGGAGCATCTGCCGCTCCCCTTCCATAAGCCTGGTTATTCCTTTGCAGTGCCTATaGAGGACATCTAGCGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPLYFWSICRSPSISLVIPLQCL*RTSSAA Trigger: CGCTGCGCTAGATGTCCTGCATAGGCACTGCAAAGG...AATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGGTGTAGTACTGGTGTCATCTTCCATTCTAGGTAGGCCTGTGTGGTGCTGGGCCAGAAGGATGTaGAAGAGCCAGGCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MPGVVLVSSSILGRPVWCWARRM*KSQASP Trigger: TGGACTTGCCTGGCTCTTGCACATCCTTCTGGCCCA...GCACCACACAGGCCTACCTAGAATGGAAGATGACACCAGTACTACACCAGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | GATGTGCTAGGAGATATAGCTCAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCTATTGGTTGGGAGCTaGAACTGTCCATTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DVLGDIAQGQSACLAHARLLVGS*NCPFTR Trigger: CCGGGTGAATGGACAGTTGCAGCTCCCAACCAATAG...CCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTATATCTCCTAGCACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | GATGTGCTAGGAGATATAGCTCAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGGAGAGTGGTGATGCCTaGGATGTGGCTTTCGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: DVLGDIAQGQSACLAHARESGDA*DVAFAI Trigger: AATGGCGAAAGCCACATCCCAGGCATCACCACTCTC...CCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTATATCTCCTAGCACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CAA 72 bp | GGTGGTGTCATTTCTGTCCACAGGTCTCAGGTGGGATaGGTATTCACCTCCGATACATTCTGGCCCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGVISVHRSQVG*VFTSDTFWPSP Trigger: TGGACTGGGCCAGAATGTATCGGAGGTGAATACCAATCCCACCTGAGACCTGTGGACAGAAATGACACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCTCTCTCAGTGTTCAAACCGTTTaGAATGAAAGCAGGCAACTA | + |
|
Preference number: 4 (lower is better) Translates to: QGQSACLAHARPWVQPSLSVQTV*NESRQL Trigger: TAGTTGCCTGCTTTCATTTCAAACGGTTTGAACACT...GAGAGAGGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | AGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACACACCCCAACCCTGTGGTGCCGAATaGAGCTGGTGTAGTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHPWRKMFYSYKGTHTPQPCGAE*SWCSGH Trigger: GTGGCCACTACACCAGCTTCATTCGGCACCACAGGG...TTGGGGTGTGTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTCTCTACTTTTGGAGCATCTGCCGCTCCCCTTCCATAAGCCTGGTTATTCTATTGGTTGGGAGCTaGAACTGTCCATTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLYFWSICRSPSISLVILLVGS*NCPFTR Trigger: CCGGGTGAATGGACAGTTGCAGCTCCCAACCAATAG...AATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTGGTGTAGTACTGGTGTCATCTTCCATTCTAGGTAGGCCTGTGTGGTGCGATCCTTCTTCTCCGTaGGTTGTGCCCCAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MPGVVLVSSSILGRPVWCDPSSP*VVPQKF Trigger: GAACTTCTGGGGCACAACCCACGGAGAAGAAGGATC...GCACCACACAGGCCTACCTAGAATGGAAGATGACACCAGTACTACACCAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCTGCAGTTACAGTGGTTaGGGTTGCTGGCCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCLSMRYPRLLHVSAFIPCSYSG*GCWPPC Trigger: GCAAGGTGGCCAGCAACCCCAACCACTGTAACTGCA...GGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGGGACACTGGATACTGTTCAATTCTTACTCAGCAAGGCCCATCGGCCTCCCTTTGCAGTGCCTATaGAGGACATCTAGCGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLGHWILFNSYSARPIGLPLQCL*RTSSAA Trigger: CGCTGCGCTAGATGTCCTGCATAGGCACTGCAAAGG...GAGGCCGATGGGCCTTGCTGAGTAAGAATTGAACAGTATCCAGTGTCCCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTCTCTACTTTTGGAGCATCTGCCGCTCCCCTTCCATAAGCCTGGTTATTTCGTCACCTTTGCAGTaGCTATGCAGGACATCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLYFWSICRSPSISLVISSPLQ*LCRTSS Trigger: GCTAGATGTCCTGCATAGGCACTGCAAAGGTGACGA...AATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AAACTGGCAAAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCGGTTGCTGGCCACCTTaGCAACATCGTCACCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLAKVFVNEISSPPPCLCGCWPP*QHRHLC Trigger: GCAAAGGTGACGATGTTGGCAAGGTGGCCAGCAACC...GCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCGAGAGTGGTGATGCCTaGGATGTGGCTTTCGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: RCLSMRYPRLLHVSAFIPESGDA*DVAFAI Trigger: AATGGCGAAAGCCACATCCCAGGCATCACCACTCTC...GGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACACACCCCAAGGTTGCTGGCCACCTTaGCAACATCGTCACCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHPWRKMFYSYKGTHTPQGCWPP*QHRHLC Trigger: GCAAAGGTGACGATGTTGGCAAGGTGGCCAGCAACC...TTGGGGTGTGTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGGGACACTGGATACTGTTCAATTCTTACTCAGCAAGGCCCATCGGCCTCTACAGTGGTTGGGGTTaGTGGCCACCTTGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLGHWILFNSYSARPIGLYSGWG*WPPCQH Trigger: ATGTTGGCAAGGTGGCCAGCAACCCCAACCACTGTA...GAGGCCGATGGGCCTTGCTGAGTAAGAATTGAACAGTATCCAGTGTCCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACACACCCCAATGGGCCAGAAGGATGTaGAAGAGCCAGGCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHPWRKMFYSYKGTHTPQWARRM*KSQASP Trigger: TGGACTTGCCTGGCTCTTGCACATCCTTCTGGCCCA...TTGGGGTGTGTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCTTTCGCCATTCAAACTaGTCTCCCTCCCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVFVNEISSPPPCLCFHPFRHSN*SPSQGS Trigger: TGAGCCCTGGGAGGGAGAGCAGTTTGAATGGCGAAA...GGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | GATGTGCTAGGAGATATAGCTCAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGGCACTACTTCCTAAGTaGTCTGGCCTTGTAAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: DVLGDIAQGQSACLAHARALLPK*SGLVNL Trigger: AAGGTTTACAAGGCCAGAGCACTTAGGAAGTAGTGC...CCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTATATCTCCTAGCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AAACTGGCAAAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCGATCCTTCTTCTCCGTaGGTTGTGCCCCAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLAKVFVNEISSPPPCLCDPSSP*VVPQKF Trigger: GAACTTCTGGGGCACAACCCACGGAGAAGAAGGATC...GCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCATGTACACGGGCACATGAGGAGATaGGTTTCCAGAATACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VNEISSPPPCLCFHPHVHGHMRR*VSRIQL Trigger: GAGCTGTATTCTGGAAACCCATCTCCTCATGTGCCC...GTGTACATGGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | ACATGTGGCTGTTACATGATTGGTCAATTGAAGCTGAGACACCCATGGAGAAAGCCCAAGTCCCGGCACTaGACACTGTTGCTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TCGCYMIGQLKLRHPWRKPKSRH*TLLLRN Trigger: GTTTCTCAGCAACAGTGTTCAGTGCCGGGACTTGGG...CTTTCTCCATGGGTGTCTCAGCTTCAATTGACCAATCATGTAACAGCCACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCCTGTACCCTGCTAGATaGCGAGCGTGTATCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: GQLKLRHPWRKMFYSYKGLYPAR*RACIHT Trigger: GGTGTGGATACACGCTCGTCATCTAGCAGGGTACAG...GCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGACTTTTTGGGACACTGGATACTGTTCAATTCTTACTCAGCAAGGCCCATCCTTTGCAGTGCCTATaGAGGACATCTAGCGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGLFGTLDTVQFLLSKAHPLQCL*RTSSAA Trigger: CGCTGCGCTAGATGTCCTGCATAGGCACTGCAAAGG...ATGGGCCTTGCTGAGTAAGAATTGAACAGTATCCAGTGTCCCAAAAAGTCCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | CTGATCAGGACTTTTTGGGACACTGGATACTGTTCAATTCTTACTCAGCAAGGCTGGGCCAGAAGGATGTaGAAGAGCCAGGCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIRTFWDTGYCSILTQQGWARRM*KSQASP Trigger: TGGACTTGCCTGGCTCTTGCACATCCTTCTGGCCCA...GCCTTGCTGAGTAAGAATTGAACAGTATCCAGTGTCCCAAAAAGTCCTGATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGGACAAAATGTGATAGTTGTGCTCCTCTGCCCCCAATCAATCAGAGGTTTTCGCCATTCAAACTaGTCTCCCTCCCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKGQNVIVVLLCPQSIRGFRHSN*SPSQGS Trigger: TGAGCCCTGGGAGGGAGAGCAGTTTGAATGGCGAAA...ACCTCTGATTGATTGGGGGCAGAGGAGCACAACTATCACATTTTGTCCCTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGGTCCATGCCCTGGGGAGAATTAAGATTGATCTTGTTTATGACTGCATGTGATCCTTCTTCTCCGTaGGTTGTGCCCCAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGSMPWGELRLILFMTACDPSSP*VVPQKF Trigger: GAACTTCTGGGGCACAACCCACGGAGAAGAAGGATC...ACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCTCAGTATTGGAGTGTaGGTCAAGGCCTGGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: KVFVNEISSPPPCLCFHPLSIGV*VKAWTM Trigger: CATTGTCCAGGCCTTGACCCACACTCCAATACTGAG...GGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCATGTACACGAAATCTCTCAGTATTaGAGTGTGGGTCAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNEISSPPPCLCFHPHVHEISQY*SVGQGL Trigger: CAGGCCTTGACCCACACTCCAATACTGAGAGATTTC...GTGTACATGGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | ACATGTGGCTGTTACATGATTGGTCAATTGAAGCTGAGACACCCATGGAGAAAGTGCAGTTACAGTGGTTaGGGTTGCTGGCCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TCGCYMIGQLKLRHPWRKCSYSG*GCWPPC Trigger: GCAAGGTGGCCAGCAACCCCAACCACTGTAACTGCA...CTTTCTCCATGGGTGTCTCAGCTTCAATTGACCAATCATGTAACAGCCACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGGTCCATGCCCTGGGGAGAATTAAGATTGATCTTGTTTATGACTGCATGTACTGAACACTGTTGCTaGGAAACCTCTGTCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGSMPWGELRLILFMTACTEHCC*ETSVEV Trigger: CACCTCGACAGAGGTTTCTCAGCAACAGTGTTCAGT...ACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCTCTCTACTTTTGGAGCATCTGCCGCTCCCCTTCCATAAGCCTGGTTATTTCAAACCGTTTGAAATaGAAGCAGGCAACTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLYFWSICRSPSISLVISNRLK*KQATTG Trigger: ACCAGTAGTTGCCTGCTTTCATTTCAAACGGTTTGA...AATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGGGACACTGGATACTGTTCAATTCTTACTCAGCAAGGCCCATCGGCCTCCAACATCGTCACCTTTaGAGTGCCTATGCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLGHWILFNSYSARPIGLQHRHL*SAYAGH Trigger: ATGTCCTGCATAGGCACTGCAAAGGTGACGATGTTG...GAGGCCGATGGGCCTTGCTGAGTAAGAATTGAACAGTATCCAGTGTCCCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | GGTCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCTTTCGCCATTCAAACTaGTCTCCCTCCCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLKLRHPWRKMFYSYKGFRHSN*SPSQGS Trigger: TGAGCCCTGGGAGGGAGAGCAGTTTGAATGGCGAAA...GCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCATGTACACAAACCTCTGTCGAGGTaGACGCTTGTAATTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNEISSPPPCLCFHPHVHKPLSR*TLVISR Trigger: CCTTGAAATTACAAGCGTCCACCTCGACAGAGGTTT...GTGTACATGGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AAACTGGCAAAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCGTTCTAGTTCAGGTTTaGTCGTTTCCCAGGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLAKVFVNEISSPPPCLCVLVQV*SFPRWD Trigger: ATCCCACCTGGGAAACGACCAAACCTGAACTAGAAC...GCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACACTGAACACTGTTGCTaGGAAACCTCTGTCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKLRHPWRKMFYSYKGTHTEHCC*ETSVEV Trigger: CACCTCGACAGAGGTTTCTCAGCAACAGTGTTCAGT...GTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACTGAACACTGTTGCTaGGAAACCTCTGTCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLKLRHPWRKMFYSYKGTEHCC*ETSVEV Trigger: CACCTCGACAGAGGTTTCTCAGCAACAGTGTTCAGT...GCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | TTGGATAATAATGGAAGGAAGGAGTATGTTCCATCCATCCATCCATCCATCCATCTGTACCCTGCTAGATaGCGAGCGTGTATCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LDNNGRKEYVPSIHPSIHLYPAR*RACIHT Trigger: GGTGTGGATACACGCTCGTCATCTAGCAGGGTACAG...ATGGATGGATGGATGGATGGATGGAACATACTCCTTCCTTCCATTATTATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCTCTCTACTTTTGGAGCATCTGCCGCTCCCCTTCCATAAGCCTGGTTATTAGTGTTCAAACCGTTTaGAATGAAAGCAGGCAACTA | + |
|
Preference number: 4 (lower is better) Translates to: SPLYFWSICRSPSISLVISVQTV*NESRQL Trigger: TAGTTGCCTGCTTTCATTTCAAACGGTTTGAACACT...AATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | ACATGTGGCTGTTACATGATTGGTCAATTGAAGCTGAGACACCCATGGAGAAAGCTCAGTATTGGAGTGTaGGTCAAGGCCTGGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: TCGCYMIGQLKLRHPWRKLSIGV*VKAWTM Trigger: CATTGTCCAGGCCTTGACCCACACTCCAATACTGAG...CTTTCTCCATGGGTGTCTCAGCTTCAATTGACCAATCATGTAACAGCCACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | CTGATCAGGACTTTTTGGGACACTGGATACTGTTCAATTCTTACTCAGCAAGGCGGGCACATGAGGAGATaGGTTTCCAGAATACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIRTFWDTGYCSILTQQGGHMRR*VSRIQL Trigger: GAGCTGTATTCTGGAAACCCATCTCCTCATGTGCCC...GCCTTGCTGAGTAAGAATTGAACAGTATCCAGTGTCCCAAAAAGTCCTGATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACACACCCCAATTCTTTCACCTTTTCTaGCTCAGGTTCCAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHPWRKMFYSYKGTHTPQFFHLF*LRFQDL Trigger: CAGGTCCTGGAACCTGAGCCAGAAAAGGTGAAAGAA...TTGGGGTGTGTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CAA 72 bp | ACAACAGTGGGGTCCATGCCCTGGGGAGAATTAAGATaGATCTTGTTTATGACTGCATGTGACATGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTVGSMPWGELR*ILFMTACDMVV Trigger: CACCACCATGTCACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCACTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CAA 72 bp | TGGAGCCCCGAATTTTGGAAGTCTTCTGATCTCTGCTaGCTGGTAAATACTGGAGCTACGCTCACAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WSPEFWKSSDLC*LVNTGATLTML Trigger: AAGCATTGTGAGCGTAGCTCCAGTATTTACCAGCAAGCAGAGATCAGAAGACTTCCAAAATTCGGGGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | ATAGATCAATTAAATCTCGATGCCTGGTGTAGTACTGGTGTCATCTTCCATTCTCTGTACCCTGCTAGATaGCGAGCGTGTATCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: IDQLNLDAWCSTGVIFHSLYPAR*RACIHT Trigger: GGTGTGGATACACGCTCGTCATCTAGCAGGGTACAG...AGAATGGAAGATGACACCAGTACTACACCAGGCATCGAGATTTAATTGATCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | TCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACTCGTCACCTTTGCAGTaGCTATGCAGGACATCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIEAETPMEKDVLQLQGHSSPLQ*LCRTSS Trigger: GCTAGATGTCCTGCATAGGCACTGCAAAGGTGACGA...GTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACACACCCCAAGCACTACTTCCTAAGTaGTCTGGCCTTGTAAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHPWRKMFYSYKGTHTPQALLPK*SGLVNL Trigger: AAGGTTTACAAGGCCAGAGCACTTAGGAAGTAGTGC...TTGGGGTGTGTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACACACCCCAAAAACCTCTGTCGAGGTaGACGCTTGTAATTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHPWRKMFYSYKGTHTPQKPLSR*TLVISR Trigger: CCTTGAAATTACAAGCGTCCACCTCGACAGAGGTTT...TTGGGGTGTGTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CAA 72 bp | GTGGGGTCCATGCCCTGGGGAGAATTAAGATTGATCTaGTTTATGACTGCATGTGACATGGTGGTGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VGSMPWGELRLI*FMTACDMVVSF Trigger: AAATGACACCACCATGTCACATGCAGTCATAAACAAGATCAATCTTAATTCTCCCCAGGGCATGGACCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | ACATGTGGCTGTTACATGATTGGTCAATTGAAGCTGAGACACCCATGGAGAAAGGGCAACTACCACACTTaGTTTTGGCACTACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TCGCYMIGQLKLRHPWRKGNYHT*FWHYFL Trigger: TAGGAAGTAGTGCCAAAATCAAGTGTGGTAGTTGCC...CTTTCTCCATGGGTGTCTCAGCTTCAATTGACCAATCATGTAACAGCCACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR TCA 90 bp | GGTCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCTCCAAGGTTCCTTGGTaGTTAACCACAGCAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQLKLRHPWRKMFYSYKGSKVPW*LTTANK Trigger: CTTGTTTGCTGTGGTTAATCACCAAGGAACCTTGGA...GCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACAAACCTCTGTCGAGGTaGACGCTTGTAATTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLRHPWRKMFYSYKGTHKPLSR*TLVISR Trigger: CCTTGAAATTACAAGCGTCCACCTCGACAGAGGTTT...GTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CCA 90 bp | TCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACGAAATCTCTCAGTATTaGAGTGTGGGTCAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIEAETPMEKDVLQLQGHEISQY*SVGQGL Trigger: CAGGCCTTGACCCACACTCCAATACTGAGAGATTTC...GTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | TCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACGTTCGCACTATTGGTTaGGAGCTGCAACTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SIEAETPMEKDVLQLQGHVRTIG*ELQLSI Trigger: AATGGACAGTTGCAGCTCCCAACCAATAGTGCGAAC...GTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGACCCAAGTCCCGGCACTaGACACTGTTGCTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRPKSRH*TLLLRN Trigger: GTTTCTCAGCAACAGTGTTCAGTGCCGGGACTTGGG...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCTCAAACCGTTTGAAATaGAAGCAGGCAACTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQLKLRHPWRKMFYSYKGSNRLK*KQATTG Trigger: ACCAGTAGTTGCCTGCTTTCATTTCAAACGGTTTGA...GCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGAGGTTGCTGGCCACCTTaGCAACATCGTCACCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRGCWPP*QHRHLC Trigger: GCAAAGGTGACGATGTTGGCAAGGTGGCCAGCAACC...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | ATAGATCAATTAAATCTCGATGCCTGGTGTAGTACTGGTGTCATCTTCCATTCTCTCAGTATTGGAGTGTaGGTCAAGGCCTGGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: IDQLNLDAWCSTGVIFHSLSIGV*VKAWTM Trigger: CATTGTCCAGGCCTTGACCCACACTCCAATACTGAG...AGAATGGAAGATGACACCAGTACTACACCAGGCATCGAGATTTAATTGATCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTTGCAGTTACAGTGGTTaGGGTTGCTGGCCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPCSYSG*GCWPPC Trigger: GCAAGGTGGCCAGCAACCCCAACCACTGTAACTGCA...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | CTGATCAGGACTTTTTGGGACACTGGATACTGTTCAATTCTTACTCAGCAAGGCAGTGTTCAAACCGTTTaGAATGAAAGCAGGCAACTA | + |
|
Preference number: 4 (lower is better) Translates to: LIRTFWDTGYCSILTQQGSVQTV*NESRQL Trigger: TAGTTGCCTGCTTTCATTTCAAACGGTTTGAACACT...GCCTTGCTGAGTAAGAATTGAACAGTATCCAGTGTCCCAAAAAGTCCTGATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | TTGGATAATAATGGAAGGAAGGAGTATGTTCCATCCATCCATCCATCCATCCATTCCAAGGTTCCTTGGTaGTTAACCACAGCAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDNNGRKEYVPSIHPSIHSKVPW*LTTANK Trigger: CTTGTTTGCTGTGGTTAATCACCAAGGAACCTTGGA...ATGGATGGATGGATGGATGGATGGAACATACTCCTTCCTTCCATTATTATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | TCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACTTCAAGGCTTCTCCTTaGTCTTCTTTGGCAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIEAETPMEKDVLQLQGHFKASP*SSLAIC Trigger: GCAAATTGCCAAAGAAGAGCAAGGAGAAGCCTTGAA...GTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATACAGTGGTTGGGGTTaGTGGCCACCTTGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: STKITNTKKLAKVFVNEIYSGWG*WPPCQH Trigger: ATGTTGGCAAGGTGGCCAGCAACCCCAACCACTGTA...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTCTATTGGTTGGGAGCTaGAACTGTCCATTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPLLVGS*NCPFTR Trigger: CCGGGTGAATGGACAGTTGCAGCTCCCAACCAATAG...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATAGAGAGTGGTGATGCCTaGGATGTGGCTTTCGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: STKITNTKKLAKVFVNEIESGDA*DVAFAI Trigger: AATGGCGAAAGCCACATCCCAGGCATCACCACTCTC...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CAA 72 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTaGTCAATGAGATATCCTCGCCTCCTCCATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKSRIQRNWQRC*SMRYPRLLHVS Trigger: AGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | ATAGATCAATTAAATCTCGATGCCTGGTGTAGTACTGGTGTCATCTTCCATTCTGGCAACTACCACACTTaGTTTTGGCACTACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: IDQLNLDAWCSTGVIFHSGNYHT*FWHYFL Trigger: TAGGAAGTAGTGCCAAAATCAAGTGTGGTAGTTGCC...AGAATGGAAGATGACACCAGTACTACACCAGGCATCGAGATTTAATTGATCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTTCGTCACCTTTGCAGTaGCTATGCAGGACATCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPSSPLQ*LCRTSS Trigger: GCTAGATGTCCTGCATAGGCACTGCAAAGGTGACGA...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTGGGCACATGAGGAGATaGGTTTCCAGAATACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPGHMRR*VSRIQL Trigger: GAGCTGTATTCTGGAAACCCATCTCCTCATGTGCCC...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTCAACATCGTCACCTTTaGAGTGCCTATGCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPQHRHL*SAYAGH Trigger: ATGTCCTGCATAGGCACTGCAAAGGTGACGATGTTG...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATAGAAATCTCTCAGTATTaGAGTGTGGGTCAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: STKITNTKKLAKVFVNEIEISQY*SVGQGL Trigger: CAGGCCTTGACCCACACTCCAATACTGAGAGATTTC...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGAGTTCGCACTATTGGTTaGGAGCTGCAACTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRVRTIG*ELQLSI Trigger: AATGGACAGTTGCAGCTCCCAACCAATAGTGCGAAC...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATTCTTTCACCTTTTCTaGCTCAGGTTCCAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRFFHLF*LRFQDL Trigger: CAGGTCCTGGAACCTGAGCCAGAAAAGGTGAAAGAA...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATTCTTTCACCTTTTCTaGCTCAGGTTCCAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: STKITNTKKLAKVFVNEIFFHLF*LRFQDL Trigger: CAGGTCCTGGAACCTGAGCCAGAAAAGGTGAAAGAA...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCAAGGTTCCTTGGTaGTTAACCACAGCAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: STKITNTKKLAKVFVNEISKVPW*LTTANK Trigger: CTTGTTTGCTGTGGTTAATCACCAAGGAACCTTGGA...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR GCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATAGCACTACTTCCTAAGTaGTCTGGCCTTGTAAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: STKITNTKKLAKVFVNEIALLPK*SGLVNL Trigger: AAGGTTTACAAGGCCAGAGCACTTAGGAAGTAGTGC...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR TCA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCAAACCGTTTGAAATaGAAGCAGGCAACTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STKITNTKKLAKVFVNEISNRLK*KQATTG Trigger: ACCAGTAGTTGCCTGCTTTCATTTCAAACGGTTTGA...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| 3UTR CAA 72 bp | TTTACTGAGTCTCTACAAAGTTCCAAGCCTTTGACTTaGACACATTGTATATCATTTATCTTTAACAGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FTESLQSSKPLT*THCISFIFNSD Trigger: GTCGCTGTTAAAGATAAATGATATACAATGTGTCAAAGTCAAAGGCTTGGAACTTTGTAGAGACTCAGTAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | GCACATGCAAGGCCCTGGGTTCAACCCTCTCTCCAGGCTGCTCTGTCCAGTGGAGGGTTGCTGGCCACCTaGCCAACATCGTCACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AHARPWVQPSLQAALSSGGLLAT*PTSSPL Trigger: CAAAGGTGACGATGTTGGCAAGGTGGCCAGCAACCC...TCCACTGGACAGAGCAGCCTGGAGAGAGGGTTGAACCCAGGGCCTTGCATGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | ATAGCTCAGGGGCAGAGTGCTTGCCTAGCACATGCAAGGCCCTGGGTTCAACCCGGGTTGCTGGCCACCTaGCCAACATCGTCACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IAQGQSACLAHARPWVQPGLLAT*PTSSPL Trigger: CAAAGGTGACGATGTTGGCAAGGTGGCCAGCAACCC...GGGTTGAACCCAGGGCCTTGCATGTGCTAGGCAAGCACTCTGCCCCTGAGCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | GCACATGCAAGGCCCTGGGTTCAACCCTCTCTCCAGGCTGCTCTGTCCAGTGGATGTTCGCACTATTGGTaGGGAGCTGCAACTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AHARPWVQPSLQAALSSGCSHYW*GAATVH Trigger: ATGGACAGTTGCAGCTCCCAACCAATAGTGCGAACA...TCCACTGGACAGAGCAGCCTGGAGAGAGGGTTGAACCCAGGGCCTTGCATGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS GCA 90 bp | AAGCCGATGGTAAAGCTGGAGGCGATCCTTCTTCTCCGTGGGTTGTaGCCCAGAAGTTCTAGTTCAGGTTTGGTCGTTTCCCAGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KPMVKLEAILLLRGL*PRSSSSGLVVSQVG Trigger: TCCCACCTGGGAAACGACCAAACCTGAACTAGAACTTCTGGGGCACAACCCACGGAGAAGAAGGATCGCCTCCAGCTTTACCATCGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS CCA 90 bp | TCCTTCTTCTCCGTGGGTTGTGCCCCAGAAGTTCTAGTTCAGGTTTaGTCGTTTCCCAGGTGGGATATTTCTCCCCAAGTCCCGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SFFSVGCAPEVLVQV*SFPRWDISPQVPAL Trigger: CAGTGCCGGGACTTGGGGAGAAATATCCCACCTGGGAAACGACCAAACCTGAACTAGAACTTCTGGGGCACAACCCACGGAGAAGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS CCA 90 bp | GGTTGTGCCCCAGAAGTTCTAGTTCAGGTTTGGTCGTTTCCCAGGTaGGATATTTCTCCCCAAGTCCCGGCACTGAACACTGTTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCAPEVLVQVWSFPR*DISPQVPALNTVAE Trigger: CTCAGCAACAGTGTTCAGTGCCGGGACTTGGGGAGAAATATCCCACCTGGGAAACGACCAAACCTGAACTAGAACTTCTGGGGCACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCGACACCATGGCAGGCTaGACAGGTGACATCGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLSMRYPRLLHVSAFIPDTMAG*TGDIGL Trigger: CAGTCCGATGTCACCTGTCAAGCCTGCCATGGTGTC...GGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTGGTGTAGTACTGGTGTCATCTTCCATTCTAGGTAGGCCTGTGTGGTGCCCAACATCGTCACCTTaGCAGTGCCTATGCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: MPGVVLVSSSILGRPVWCPTSSP*QCLCRT Trigger: TGTCCTGCATAGGCACTGCAAAGGTGACGATGTTGG...GCACCACACAGGCCTACCTAGAATGGAAGATGACACCAGTACTACACCAGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS TCA 90 bp | CAGGTGGGATATTTCTCCCCAAGTCCCGGCACTGAACACTGTTGCTaGGAAACCTCTGTCGAGGTGGACGCTTGTAATTTCAAGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QVGYFSPSPGTEHCC*ETSVEVDACNFKAS Trigger: AGAAGCCTTGAAATTACAAGCGTCCACCTCGACAGAGGTTTCTCAGCAACAGTGTTCAGTGCCGGGACTTGGGGAGAAATATCCCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCTTACAGTGGTTGGGGTaGCTGGCCACCTTGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: KVFVNEISSPPPCLCFHPLQWLG*LATLPT Trigger: TGTTGGCAAGGTGGCCAGCAACCCCAACCACTGTAA...GGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | TTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACTTACAGTGGTTGGGGTaGCTGGCCACCTTGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LKLRHPWRKMFYSYKGTHLQWLG*LATLPT Trigger: TGTTGGCAAGGTGGCCAGCAACCCCAACCACTGTAA...GTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCAGTAAATGTTTTAAGTACCTGCTCGTTATATGCCAGGAACTATGTGCCGACACCATGGCAGGCTaGACAGGTGACATCGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSKCFKYLLVICQELCADTMAG*TGDIGL Trigger: CAGTCCGATGTCACCTGTCAAGCCTGCCATGGTGTC...GGCACATAGTTCCTGGCATATAACGAGCAGGTACTTAAAACATTTACTGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCTCTACTTTTGGAGCATCTGCCGCTCCCCTTCCATAAGCCTGGTTATTCTACCACACTTGATTTaGGCACTACTTCCTAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLYFWSICRSPSISLVILPHLI*ALLPKC Trigger: GCACTTAGGAAGTAGTGCCAAAATCAAGTGTGGTAG...AATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | AAACTGGCAAAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCATGTACGTAGTGATCTaGCGCCTCTGTTTCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLAKVFVNEISSPPPCLCMYVVI*RLCFAE Trigger: CTCAGCGAAACAGAGGCGCAAGATCACTACGTACAT...GCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTTTGCCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGGACACTGGATACTGTTCAATTCTTACTCAGCAAGGCCCATCGGCCTCTGTTCGCACTATTGGTaGGGAGCTGCAACTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLGHWILFNSYSARPIGLCSHYW*GAATVH Trigger: ATGGACAGTTGCAGCTCCCAACCAATAGTGCGAACA...GAGGCCGATGGGCCTTGCTGAGTAAGAATTGAACAGTATCCAGTGTCCCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCTCTACTTTTGGAGCATCTGCCGCTCCCCTTCCATAAGCCTGGTTATTTTTCAAGGCTTCTCCTaGCTCTTCTTTGGCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLYFWSICRSPSISLVIFQGFS*LFFGNL Trigger: CAAATTGCCAAAGAAGAGCAAGGAGAAGCCTTGAAA...AATAACCAGGCTTATGGAAGGGGAGCGGCAGATGCTCCAAAAGTAGAGAGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCAGAAATCTCTCAGTATaGGAGTGTGGGTCAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KVFVNEISSPPPCLCFHPRNLSV*ECGSRP Trigger: AGGCCTTGACCCACACTCCAATACTGAGAGATTTCT...GGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | ACATGTGGCTGTTACATGATTGGTCAATTGAAGCTGAGACACCCATGGAGAAAGCCAACATCGTCACCTTaGCAGTGCCTATGCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TCGCYMIGQLKLRHPWRKPTSSP*QCLCRT Trigger: TGTCCTGCATAGGCACTGCAAAGGTGACGATGTTGG...CTTTCTCCATGGGTGTCTCAGCTTCAATTGACCAATCATGTAACAGCCACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | GTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCATGTACACCTACCACACTTGATTTaGGCACTACTTCCTAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VNEISSPPPCLCFHPHVHLPHLI*ALLPKC Trigger: GCACTTAGGAAGTAGTGCCAAAATCAAGTGTGGTAG...GTGTACATGGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTGGTGTAGTACTGGTGTCATCTTCCATTCTAGGTAGGCCTGTGTGGTGCGAATACTTATTCTCGTaGTTCGCACTATTGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MPGVVLVSSSILGRPVWCEYLFS*FALLVG Trigger: CCCAACCAATAGTGCGAACAACGAGAATAAGTATTC...GCACCACACAGGCCTACCTAGAATGGAAGATGACACCAGTACTACACCAGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGTTTGTCAATGAGATATCCTCGCCTCCTCCATGTCTCTGCTTTCATCCCCTTTCAAGGCTTCTCCTaGCTCTTCTTTGGCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLSMRYPRLLHVSAFIPFQGFS*LFFGNL Trigger: CAAATTGCCAAAGAAGAGCAAGGAGAAGCCTTGAAA...GGGGATGAAAGCAGAGACATGGAGGAGGCGAGGATATCTCATTGACAAACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | TTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACACACATGTACGTAGTGATCTaGCGCCTCTGTTTCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LKLRHPWRKMFYSYKGTHMYVVI*RLCFAE Trigger: CTCAGCGAAACAGAGGCGCAAGATCACTACGTACAT...GTGTGTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | TTGGATAATAATGGAAGGAAGGAGTATGTTCCATCCATCCATCCATCCATCCATAGTTCTAGTTCAGGTTaGGTCGTTTCCCAGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDNNGRKEYVPSIHPSIHSSSSG*VVSQVG Trigger: TCCCACCTGGGAAACGACCAAACCTGAACTAGAACT...ATGGATGGATGGATGGATGGATGGAACATACTCCTTCCTTCCATTATTATCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGAGGGTTGCTGGCCACCTaGCCAACATCGTCACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRGLLAT*PTSSPL Trigger: CAAAGGTGACGATGTTGGCAAGGTGGCCAGCAACCC...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTGACACCATGGCAGGCTaGACAGGTGACATCGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPDTMAG*TGDIGL Trigger: CAGTCCGATGTCACCTGTCAAGCCTGCCATGGTGTC...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | CTAAAGGGACAAAATGTGATAGTTGTGCTCCTCTGCCCCCAATCAATCAGAGGTGAATACTTATTCTCGTaGTTCGCACTATTGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKGQNVIVVLLCPQSIRGEYLFS*FALLVG Trigger: CCCAACCAATAGTGCGAACAACGAGAATAAGTATTC...ACCTCTGATTGATTGGGGGCAGAGGAGCACAACTATCACATTTTGTCCCTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGACTTTTTGGGACACTGGATACTGTTCAATTCTTACTCAGCAAGGCCCATTCCTTAATACTGGCCTaGGTGATTACGGCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLFGTLDTVQFLLSKAHSLILA*VITASS Trigger: TGATGATGCCGTAATCACCAAGGCCAGTATTAAGGA...ATGGGCCTTGCTGAGTAAGAATTGAACAGTATCCAGTGTCCCAAAAAGTCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | GGTCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCTCCTTAATACTGGCCTaGGTGATTACGGCATCATCA | + |
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Preference number: 5 (lower is better) Translates to: GQLKLRHPWRKMFYSYKGSLILA*VITASS Trigger: TGATGATGCCGTAATCACCAAGGCCAGTATTAAGGA...GCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | TCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACTCCTTAATACTGGCCTaGGTGATTACGGCATCATCA | + |
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Preference number: 5 (lower is better) Translates to: SIEAETPMEKDVLQLQGHSLILA*VITASS Trigger: TGATGATGCCGTAATCACCAAGGCCAGTATTAAGGA...GTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | ATAGATCAATTAAATCTCGATGCCTGGTGTAGTACTGGTGTCATCTTCCATTCTAGAAATCTCTCAGTATaGGAGTGTGGGTCAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: IDQLNLDAWCSTGVIFHSRNLSV*ECGSRP Trigger: AGGCCTTGACCCACACTCCAATACTGAGAGATTTCT...AGAATGGAAGATGACACCAGTACTACACCAGGCATCGAGATTTAATTGATCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTCCAACATCGTCACCTTaGCAGTGCCTATGCAGGACA | + |
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Preference number: 5 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPPTSSP*QCLCRT Trigger: TGTCCTGCATAGGCACTGCAAAGGTGACGATGTTGG...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | TCAATTGAAGCTGAGACACCCATGGAGAAAGATGTTTTACAGTTACAAGGGCACAGATTCTTGGTAGCTTaGGCAACTACCACACTTGAT | + |
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Preference number: 5 (lower is better) Translates to: SIEAETPMEKDVLQLQGHRFLVA*ATTTLD Trigger: ATCAAGTGTGGTAGTTGCCAAAGCTACCAAGAATCT...GTGCCCTTGTAACTGTAAAACATCTTTCTCCATGGGTGTCTCAGCTTCAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | CCATCCAGTAAATGTTTTAAGTACCTGCTCGTTATATGCCAGGAACTATGTGCCAGATTCTTGGTAGCTTaGGCAACTACCACACTTGAT | + |
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Preference number: 5 (lower is better) Translates to: PSSKCFKYLLVICQELCARFLVA*ATTTLD Trigger: ATCAAGTGTGGTAGTTGCCAAAGCTACCAAGAATCT...GGCACATAGTTCCTGGCATATAACGAGCAGGTACTTAAAACATTTACTGGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS CCA 90 bp | TCGAGGTGGACGCTTGTAATTTCAAGGCTTCTCCTTGCTCTTCTTTaGCAATTTGCTCAATGTCTATGTCATACACATAGTCTTTACACA | + |
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Preference number: 5 (lower is better) Translates to: SRWTLVISRLLLALL*QFAQCLCHTHSLYT Trigger: TGTGTAAAGACTATGTGTATGACATAGACATTGAGCAAATTGCCAAAGAAGAGCAAGGAGAAGCCTTGAAATTACAAGCGTCCACCTCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATAAGTTCTAGTTCAGGTTaGGTCGTTTCCCAGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: STKITNTKKLAKVFVNEISSSSG*VVSQVG Trigger: TCCCACCTGGGAAACGACCAAACCTGAACTAGAACT...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | TTGGATAATAATGGAAGGAAGGAGTATGTTCCATCCATCCATCCATCCATCCATAGATTCTTGGTAGCTTaGGCAACTACCACACTTGAT | + |
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Preference number: 5 (lower is better) Translates to: LDNNGRKEYVPSIHPSIHRFLVA*ATTTLD Trigger: ATCAAGTGTGGTAGTTGCCAAAGCTACCAAGAATCT...ATGGATGGATGGATGGATGGATGGAACATACTCCTTCCTTCCATTATTATCCAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTATGTACGTAGTGATCTaGCGCCTCTGTTTCGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPMYVVI*RLCFAE Trigger: CTCAGCGAAACAGAGGCGCAAGATCACTACGTACAT...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | ATAGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATGTTCGCACTATTGGTaGGGAGCTGCAACTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: IAQKSRIQRNWQRCLSMRCSHYW*GAATVH Trigger: ATGGACAGTTGCAGCTCCCAACCAATAGTGCGAACA...TCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTAGAAATCTCTCAGTATaGGAGTGTGGGTCAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPRNLSV*ECGSRP Trigger: AGGCCTTGACCCACACTCCAATACTGAGAGATTTCT...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATACTACCACACTTGATTTaGGCACTACTTCCTAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: STKITNTKKLAKVFVNEILPHLI*ALLPKC Trigger: GCACTTAGGAAGTAGTGCCAAAATCAAGTGTGGTAG...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | CAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATATCCTTTTCAAGGCTTCTCCTaGCTCTTCTTTGGCAATTTG | + |
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Preference number: 5 (lower is better) Translates to: QKSRIQRNWQRCLSMRYPFQGFS*LFFGNL Trigger: CAAATTGCCAAAGAAGAGCAAGGAGAAGCCTTGAAA...AGGATATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS-3UTR CAA 90 bp | AGCACAAAAATCACGAATACAAAGAAACTGGCAAAGGTGTTTGTCAATGAGATAGAATACTTATTCTCGTaGTTCGCACTATTGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: STKITNTKKLAKVFVNEIEYLFS*FALLVG Trigger: CCCAACCAATAGTGCGAACAACGAGAATAAGTATTC...TATCTCATTGACAAACACCTTTGCCAGTTTCTTTGTATTCGTGATTTTTGTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS CAA 72 bp | TTGGGGTTGCTGGCCACCTTGCCAACATCGTCACCTTaGCAGTGCCTATGCAGGACATCTAGCGCAGCGATG | + |
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Preference number: 6 (lower is better) Translates to: LGLLATLPTSSP*QCLCRTSSAAM Trigger: CATCGCTGCGCTAGATGTCCTGCATAGGCACTGCAAAGGTGACGATGTTGGCAAGGTGGCCAGCAACCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS CAA 90 bp | CGTAAGCCGATGGTAAAGCTGGAGGCGATCCTTCTTCTCCGTGGGTaGTGCCCCAGAAGTTCTAGTTCAGGTTTGGTCGTTTCCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RKPMVKLEAILLLRG*CPRSSSSGLVVSQV Trigger: CACCTGGGAAACGACCAAACCTGAACTAGAACTTCTGGGGCACAACCCACGGAGAAGAAGGATCGCCTCCAGCTTTACCATCGGCTTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS CAA 90 bp | ATCCTTCTTCTCCGTGGGTTGTGCCCCAGAAGTTCTAGTTCAGGTTaGGTCGTTTCCCAGGTGGGATATTTCTCCCCAAGTCCCGGCACT | + |
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Preference number: 6 (lower is better) Translates to: ILLLRGLCPRSSSSG*VVSQVGYFSPSPGT Trigger: AGTGCCGGGACTTGGGGAGAAATATCCCACCTGGGAAACGACCAAACCTGAACTAGAACTTCTGGGGCACAACCCACGGAGAAGAAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS GCA 72 bp | GTAAAGCTGGAGGCGATCCTTCTTCTCCGTGGGTTGTaGCCCAGAAGTTCTAGTTCAGGTTTGGTCGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VKLEAILLLRGL*PRSSSSGLVVS Trigger: GGAAACGACCAAACCTGAACTAGAACTTCTGGGGCACAACCCACGGAGAAGAAGGATCGCCTCCAGCTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS CCA 72 bp | TCCGTGGGTTGTGCCCCAGAAGTTCTAGTTCAGGTTTaGTCGTTTCCCAGGTGGGATATTTCTCCCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SVGCAPEVLVQV*SFPRWDISPQV Trigger: GACTTGGGGAGAAATATCCCACCTGGGAAACGACCAAACCTGAACTAGAACTTCTGGGGCACAACCCACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS CAA 72 bp | CTCCGTGGGTTGTGCCCCAGAAGTTCTAGTTCAGGTTaGGTCGTTTCCCAGGTGGGATATTTCTCCCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: LRGLCPRSSSSG*VVSQVGYFSPS Trigger: ACTTGGGGAGAAATATCCCACCTGGGAAACGACCAAACCTGAACTAGAACTTCTGGGGCACAACCCACGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS TCA 72 bp | GAGCTGCAACTGTCCATTCACCCGGGTCTCTTTACTTaGCGCCATAAATGGTGTCATATCCAGCTCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ELQLSIHPGLFT*RHKWCHIQLQR Trigger: CCTCTGGAGCTGGATATGACACCATTTATGGCGTCAAGTAAAGAGACCCGGGTGAATGGACAGTTGCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS CCA 72 bp | CCAGAAGTTCTAGTTCAGGTTTGGTCGTTTCCCAGGTaGGATATTTCTCCCCAAGTCCCGGCACTGAACACT | + |
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Preference number: 6 (lower is better) Translates to: PEVLVQVWSFPR*DISPQVPALNT Trigger: AGTGTTCAGTGCCGGGACTTGGGGAGAAATATCCCACCTGGGAAACGACCAAACCTGAACTAGAACTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS CAA 72 bp | ATGGTAAAGCTGGAGGCGATCCTTCTTCTCCGTGGGTaGTGCCCCAGAAGTTCTAGTTCAGGTTTGGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: MVKLEAILLLRG*CPRSSSSGLVV Trigger: AACGACCAAACCTGAACTAGAACTTCTGGGGCACAACCCACGGAGAAGAAGGATCGCCTCCAGCTTTACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS TCA 72 bp | TATTTCTCCCCAAGTCCCGGCACTGAACACTGTTGCTaGGAAACCTCTGTCGAGGTGGACGCTTGTAATTTC | + |
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Preference number: 6 (lower is better) Translates to: YFSPSPGTEHCC*ETSVEVDACNF Trigger: GAAATTACAAGCGTCCACCTCGACAGAGGTTTCTCAGCAACAGTGTTCAGTGCCGGGACTTGGGGAGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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| CDS CCA 72 bp | GCACTGAACACTGTTGCTGAGAAACCTCTGTCGAGGTaGACGCTTGTAATTTCAAGGCTTCTCCTTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ALNTVAEKPLSR*TLVISRLLLAL Trigger: AAGAGCAAGGAGAAGCCTTGAAATTACAAGCGTCCACCTCGACAGAGGTTTCTCAGCAACAGTGTTCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115744.2 ENSMUST00000178293.9 ENSMUST00000191497.2 |
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