Pregenerated sensors for USP25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022867Ensembl transcript IDs: ENSMUST00000023580.8, ENSMUST00000239066.2
Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CAA 90 bp | AACAAGGTGAGTGCCATGCGATTCTCGGGTTTATTGTTTGCAGTCTaGGCTAAGGTCGGCATAGTCGTTTTGTCTTTTGCAGTTATTAAA | + |
Preference number: 2 (lower is better) Translates to: NKVSAMRFSGLLFAV*AKVGIVVLSFAVIK Trigger: TTTAATAACTGCAAAAGACAAAACGACTATGCCGACCTTAGCCAAGACTGCAAACAATAAACCCGAGAATCGCATGGCACTCACCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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3UTR-3UTR TCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTCGGATAAAACAAGGTaGGTGCCATGCGATTCTCGG | + |
Preference number: 2 (lower is better) Translates to: LLYASSNVHPMAKLMYITSDKTR*VPCDSR Trigger: CCGAGAATCGCATGGCACTCACCTTGTTTTATCCGA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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3UTR-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTAGGTCCCAGACTAAATaGAAAGCTGTTTGTAAAGAA | + |
Preference number: 2 (lower is better) Translates to: LLYASSNVHPMAKLMYITRSQTK*KAVCKE Trigger: TTCTTTACAAACAGCTTTCCATTTAGTCTGGGACCT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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3UTR-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTCGATTCTCGGGTTTATaGTTTGCAGTCTTGGCTAAG | + |
Preference number: 3 (lower is better) Translates to: LLYASSNVHPMAKLMYITRFSGL*FAVLAK Trigger: CTTAGCCAAGACTGCAAACAATAAACCCGAGAATCG...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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3UTR-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAGTCGGCATAGTCGTTTaGTCTTTTGCAGTTATTAAA | + |
Preference number: 3 (lower is better) Translates to: NTKGLLLYASSNVHPMAKVGIVV*SFAVIK Trigger: TTTAATAACTGCAAAAGACAAAACGACTATGCCGAC...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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3UTR GCA 72 bp | GTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTaGCATGCGATTCTCGGGTTTATTGTTTGCAGTCTT | + |
Preference number: 3 (lower is better) Translates to: VIIHWFRIKQGE*HAILGFIVCSL Trigger: AAGACTGCAAACAATAAACCCGAGAATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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3UTR-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTGTCGGCATAGTCGTTTaGTCTTTTGCAGTTATTAAA | + |
Preference number: 3 (lower is better) Translates to: LLYASSNVHPMAKLMYITVGIVV*SFAVIK Trigger: TTTAATAACTGCAAAAGACAAAACGACTATGCCGAC...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGGTCTGCTGGTGCTTCTaGGCCGCGCTCTGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVVCWCF*AALCCS Trigger: GCTGCAGCAGAGCGCGGCGCAGAAGCACCAGCAGAC...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTGCGCCGCGCTCTGCTaGAGCACATTCTGCTCCACG | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVCAALC*STFCST Trigger: CGTGGAGCAGAATGTGCTGCAGCAGAGCGCGGCGCA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTTATGCCCGTCTCCCTaGATGCCCTGTTTGACTCCG | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVLCPSP*MPCLTP Trigger: CGGAGTCAAACAGGGCATTCAGGGAGACGGGCATAA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTGCCTTGGTGCCGGATaGATGGGCAAATCTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVCLGAG*MGKSGG Trigger: ACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGCATCAACGGGGGAAGTaGACACAGGTTTACTGGAGG | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVHQRGK*TQVYWR Trigger: CCTCCAGTAAACCTGTGTGCACTTCCCCCGTTGATG...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTCTTCCTCTGTGATGTaGCTTGGTGCCGGATGCATG | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVSSSVM*LGAGCM Trigger: CATGCATCCGGCACCAAGGCACATCACAGAGGAAGA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTCCACCTCTACACCTTaGTGGCTAGAAGGTGGTTGG | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVSTSTP*WLEGGW Trigger: CCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTGGA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTTCTTGCCCCAGGTATaGACACCAGCGATTCCTCAT | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVFLPQV*TPAIPH Trigger: ATGAGGAATCGCTGGTGTTCATACCTGGGGCAAGAA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGATGCATGGGCAAATCTaGAGGTATCCGAGACTGAGT | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVMHGQI*RYPRLS Trigger: ACTCAGTCTCGGATACCTCCAGATTTGCCCATGCAT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGGGTGGAGTATCTTCTTaGGCCAACTTAACCAGCCTA | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVGGVSS*ANLTSL Trigger: TAGGCTGGTTAAGTTGGCCCAAGAAGATACTCCACC...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTTTCGGGGTAAATCTTaGGCATTTGATGGAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVFRGKS*AFDGGL Trigger: CAAGCCTCCATCAAATGCTCAAGATTTACCCCGAAA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGGAATCTCAACTGCTCTaGACGGATCAACATACTTCC | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVESQLL*TDQHTS Trigger: GGAAGTATGTTGATCCGTCCAGAGCAGTTGAGATTC...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGCCAATGGGAATCTTTTaGGACCGGAACCATAGCTTA | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVPMGIF*DRNHSL Trigger: TAAGCTATGGTTCCGGTCCCAAAAGATTCCCATTGG...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGAAGGCAATCGCTCTCTaGAGATCATCTTTGTCATCT | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVKAIAL*RSSLSS Trigger: AGATGACAAAGATGATCTTCAGAGAGCGATTGCCTT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGCTTCAGAATCTCAACTaGTCTGGACGGATCAACATA | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVLQNLN*SGRINI Trigger: TATGTTGATCCGTCCAGAGCAGTTGAGATTCTGAAG...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGAATTTAATTGCCGACTaGAAAACTGTCTCTGGCCCT | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVNLIAD*KTVSGP Trigger: AGGGCCAGAGACAGTTTTGCAGTCGGCAATTAAATT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023580.8 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTCTTCAGCTTTCATTTaGAAGGCATCTTCCAACCAG | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVSSAFI*KASSNQ Trigger: CTGGTTGGAAGATGCCTTCCAAATGAAAGCTGAAGA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTACCATAGGGTTCTTTaGCTTCTCTTCATCCGTTTC | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVYHRVL*LLFIRF Trigger: GAAACGGATGAAGAGAAGCCAAAGAACCCTATGGTA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGACAAATTTCCCTAAGTaGGGAATCTCCACCTCTACA | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVTNFPK*GISTST Trigger: TGTAGAGGTGGAGATTCCCCACTTAGGGAAATTTGT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAGGAGCCGGGCAGATCTaGAGCACAGGGTCCCTGCTG | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKGAGQI*STGSLL Trigger: CAGCAGGGACCCTGTGCTTCAGATCTGCCCGGCTCC...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGATTTGTCCGAGTACATaGGTTCAATTGTTCGATGGA | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVICPST*VQLFDG Trigger: TCCATCGAACAATTGAACTCATGTACTCGGACAAAT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGATTCTTCAGACCGACTaGAGCTTTCTCTTGTCTTTT | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVILQTD*SFLLSF Trigger: AAAAGACAAGAGAAAGCTCCAGTCGGTCTGAAGAAT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGCAACATACTTCCTCTTaGTACCAACAAGAAGTGCAA | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVQHTSS*YQQEVQ Trigger: TTGCACTTCTTGTTGGTACCAAGAGGAAGTATGTTG...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGATAATCTGTTTCTGGTaGAGTATCTTCTTGGGCCAA | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVIICFW*SIFLGQ Trigger: TTGGCCCAAGAAGATACTCCACCAGAAACAGATTAT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGCTTTGTCATCTCCAGTaGGATCAATTACATTTGCAT | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVLCHLQ*DQLHLH Trigger: ATGCAAATGTAATTGATCTCACTGGAGATGACAAAG...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATGCGCCGCGCTCTGCTaGAGCACATTCTGCTCCACG | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKCAALC*STFCST Trigger: CGTGGAGCAGAATGTGCTGCAGCAGAGCGCGGCGCA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGATTTCCAGTTTGGCTTaGGCAACTTTCATTATGTTG | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVISSLA*ATFIML Trigger: CAACATAATGAAAGTTGCCCAAGCCAAACTGGAAAT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATTCTGCGCCGCGCTCTaGTGCAGCACATTCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKFCAAL*CSTFCS Trigger: GGAGCAGAATGTGCTGCAGCAGAGCGCGGCGCAGAA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGAATGATTTTCTTTGGTaGCTGGTTCTGGATAAAGTA | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVNDFLW*LVLDKV Trigger: TACTTTATCCAGAACCAGGCACCAAAGAAAATCATT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGGAATTTCTTATAATCTaGATGCCACTCCTCATATTC | + |
Preference number: 4 (lower is better) Translates to: QQAIPAAGSRGENRVSMVEFLII*MPLLIF Trigger: GAATATGAGGAGTGGCATGCAGATTATAAGAAATTC...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGGAGCCGGGCAGATCTaGAGCACAGGGTCCCTGCTG | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIGAGQI*STGSLL Trigger: CAGCAGGGACCCTGTGCTTCAGATCTGCCCGGCTCC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGTCTGCTGGTGCTTCTaGGCCGCGCTCTGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIVCWCF*AALCCS Trigger: GCTGCAGCAGAGCGCGGCGCAGAAGCACCAGCAGAC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACCTGAATGCCCTGTTTaGCTCCGCCAAACTCAAGGC | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKPECPV*LRQTQG Trigger: GCCTTGAGTTTGGCGGAGTCAAACAGGGCATTCAGG...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAGAAGCACAGGGTCCCTaGTGTTCTGTTGTGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKEAQGP*CSVVLG Trigger: ACCAAGCACAACAGAACAGCAGGGACCCTGTGCTTC...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATTCAAAAATGTCTGCTaGTGCTTCTGCGCCGCGCTC | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKFKNVC*CFCAAL Trigger: GAGCGCGGCGCAGAAGCACCAGCAGACATTTTTGAA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTCTCCTGCTTGTGCTGTaGTGGCCGAAGCCTCTGCTT | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITLLLVL*WPKPLL Trigger: AAGCAGAGGCTTCGGCCACCACAGCACAAGCAGGAG...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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3UTR CAA 72 bp | AGTGCCATGCGATTCTCGGGTTTATTGTTTGCAGTCTaGGCTAAGGTCGGCATAGTCGTTTTGTCTTTTGCA | + |
Preference number: 4 (lower is better) Translates to: SAMRFSGLLFAV*AKVGIVVLSFA Trigger: TGCAAAAGACAAAACGACTATGCCGACCTTAGCCAAGACTGCAAACAATAAACCCGAGAATCGCATGGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTTATGCCCGTCTCCCTaGATGCCCTGTTTGACTCCG | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITLCPSP*MPCLTP Trigger: CGGAGTCAAACAGGGCATTCAGGGAGACGGGCATAA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
||
CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAGGTCTTGGCATTCTTTaGAGTGAGGAAGGCTACTGC | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKGLGIL*SEEGYC Trigger: GCAGTAGCCTTCCTCACTGCAAAGAATGCCAAGACC...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
||
CDS-3UTR GCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTGCCTCCAGGCACTCATaGAGGTCTTTGAACCCGTTC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITASRHS*RSLNPF Trigger: GAACGGGTTCAAAGACCTGCATGAGTGCCTGGAGGC...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTCTCTGTGATGTGCCTTaGTGCCGGATGCATGGGCAA | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITLCDVP*CRMHGQ Trigger: TTGCCCATGCATCCGGCACCAAGGCACATCACAGAG...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTCCTGAATGCCCTGTTTaGCTCCGCCAAACTCAAGGC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIPECPV*LRQTQG Trigger: GCCTTGAGTTTGGCGGAGTCAAACAGGGCATTCAGG...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
||
CDS-3UTR TCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCTCTTCTGTAATGTaGTATCAGCTCCCCATCGTG | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKLSSVM*YQLPIV Trigger: CACGATGGGGAGCTGATATCACATTACAGAAGAGAG...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
||
CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGCCTCCAGGCACTCATaGAGGTCTTTGAACCCGTTC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIASRHS*RSLNPF Trigger: GAACGGGTTCAAAGACCTGCATGAGTGCCTGGAGGC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
||
CDS-3UTR GCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTCATCAACGGGGGAAGTaGACACAGGTTTACTGGAGG | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITHQRGK*TQVYWR Trigger: CCTCCAGTAAACCTGTGTGCACTTCCCCCGTTGATG...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
||
CDS-3UTR CCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAATGCATGGGCAAATCTaGAGGTATCCGAGACTGAGT | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKMHGQI*RYPRLS Trigger: ACTCAGTCTCGGATACCTCCAGATTTGCCCATGCAT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
||
CDS-3UTR TCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATGGCATTCTTTGCAGTaGGGAAGGCTACTGCTAATT | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKWHSLQ*GRLLLI Trigger: AATTAGCAGTAGCCTTCCTCACTGCAAAGAATGCCA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATTTCGGGGTAAATCTTaGGCATTTGATGGAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKFRGKS*AFDGGL Trigger: CAAGCCTCCATCAAATGCTCAAGATTTACCCCGAAA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
||
CDS-3UTR TCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTTCTTGCCCCAGGTATaGACACCAGCGATTCCTCAT | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITFLPQV*TPAIPH Trigger: ATGAGGAATCGCTGGTGTTCATACCTGGGGCAAGAA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAAATTACATTTGCATCTaGCTGGCTTCCCACGCTGAT | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKNYICI*LASHAD Trigger: ATCAGCGTGGGAAGCCAGGCAGATGCAAATGTAATT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAGAGATCAATTACATTTaGATCTGCCTGGCTTCCCAC | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKEINYI*ICLASH Trigger: GTGGGAAGCCAGGCAGATGCAAATGTAATTGATCTC...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAAATTCAGTGAACCAATaGTCCTGGCCTGACTTTCCT | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKNSVNQ*SWPDFP Trigger: AGGAAAGTCAGGCCAGGAGCATTGGTTCACTGAATT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGAAGCACAGGGTCCCTaGTGTTCTGTTGTGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIEAQGP*CSVVLG Trigger: ACCAAGCACAACAGAACAGCAGGGACCCTGTGCTTC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTGTGATGTGCCTTGGTaGCGGATGCATGGGCAAATC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAICDVPW*RMHGQI Trigger: GATTTGCCCATGCATCCGGCACCAAGGCACATCACA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTCTTCCTCTGTGATGTaGCTTGGTGCCGGATGCATG | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAISSSVM*LGAGCM Trigger: CATGCATCCGGCACCAAGGCACATCACAGAGGAAGA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTTTTCTTGGAGGTTTaGTTCCATTTCTTGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKLFLEV*FHFLPQ Trigger: CTGGGGCAAGAAATGGAAGCAAACCTCCAAGAAAAG...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTGCCTTAAAGAACCCTaGTTCAGGGCCACACCTGTC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAICLKEP*FRATPV Trigger: GACAGGTGTGGCCCTGAAGCAGGGTTCTTTAAGGCA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTTCAAAAATGTCTGCTaGTGCTTCTGCGCCGCGCTC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIFKNVC*CFCAAL Trigger: GAGCGCGGCGCAGAAGCACCAGCAGACATTTTTGAA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTACATTTGCATCTGCCTaGCTTCCCACGCTGATGTAC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITTFASA*LPTLMY Trigger: GTACATCAGCGTGGGAAGCCAGGCAGATGCAAATGT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACCAATGGGAATCTTTTaGGACCGGAACCATAGCTTA | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKPMGIF*DRNHSL Trigger: TAAGCTATGGTTCCGGTCCCAAAAGATTCCCATTGG...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATGCACACAGGTTTACTaGAGGCAAACTCCAATGCAT | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKCTQVY*RQTPMH Trigger: ATGCATTGGAGTTTGCCTCCAGTAAACCTGTGTGCA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTTGGTGCCGGATGCATaGGCAAATCTGGAGGTATCC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAILVPDA*ANLEVS Trigger: GGATACCTCCAGATTTGCCCATGCATCCGGCACCAA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTACCTCTACACCTTGCTaGCTAGAAGGTGGTTGGCTC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAITSTPC*LEGGWL Trigger: GAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAAAGGCAATCGCTCTCTaGAGATCATCTTTGTCATCT | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKKAIAL*RSSLSS Trigger: AGATGACAAAGATGATCTTCAGAGAGCGATTGCCTT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTCACATCTTGCTGCTGTaGGTCATTGGATTTGAAGGC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITHILLL*VIGFEG Trigger: GCCTTCAAATCCAATGACTCACAGCAGCAAGATGTG...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAGGTACCAACAAGAAGTaGAAACAGATACCTCAGTTC | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKGTNKK*KQIPQF Trigger: GAACTGAGGTATCTGTTTGCACTTCTTGTTGGTACC...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTTCAGAATCTCAACTaGTCTGGACGGATCAACATA | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKLQNLN*SGRINI Trigger: TATGTTGATCCGTCCAGAGCAGTTGAGATTCTGAAG...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTGATGGATTCTGGATATaGTTTCCTGCAGATCTCGCG | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITDGFWI*FPADLA Trigger: CGCGAGATCTGCAGGAAAGCATATCCAGAATCCATC...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAATTCCAACAAGGGCCTaGCCAGTCTCTTTATTAAAC | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKIPTRA*PVSLLN Trigger: GTTTAATAAAGAGACTGGGCAGGCCCTTGTTGGAAT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTCCTTCAGGGCTTGTTaGAGTATCTGGGCGTCATTA | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITSFRAC*SIWASL Trigger: TAATGACGCCCAGATACTCCAACAAGCCCTGAAGGA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTACATTTGCATCTGCCTaGCTTCCCACGCTGATGTAC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAITFASA*LPTLMY Trigger: GTACATCAGCGTGGGAAGCCAGGCAGATGCAAATGT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATTAAGCAGTATGCACTaGCATTTCGATAACCACCGA | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKLSSMH*HFDNHR Trigger: TCGGTGGTTATCGAAATGCCAGTGCATACTGCTTAA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTCCTTCTCAAAGCGCTaGTTGTCCTCCTCAACAAAG | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITSFSKR*LSSSTK Trigger: CTTTGTTGAGGAGGACAACCAGCGCTTTGAGAAGGA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTGCAAAACTGTCTCTaGCCCTTTATCTTCAAGATC | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKLQNCL*PFIFKI Trigger: GATCTTGAAGATAAAGGGCCAGAGACAGTTTTGCAG...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAACGATAATCTGTTTCTaGTGGAGTATCTTCTTGGGC | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKTIICF*WSIFLG Trigger: GCCCAAGAAGATACTCCACCAGAAACAGATTATCGT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTAAGGTGGTTGGCTCGTaGTGTTTGCAGGTTTCGACT | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIKVVGS*CLQVST Trigger: AGTCGAAACCTGCAAACACCACGAGCCAACCACCTT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTCACATCTTGCTGCTGTaGGTCATTGGATTTGAAGGC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIHILLL*VIGFEG Trigger: GCCTTCAAATCCAATGACTCACAGCAGCAAGATGTG...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTCTCTCTTCTGTAATGTaGTATCAGCTCCCCATCGTG | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAILSSVM*YQLPIV Trigger: CACGATGGGGAGCTGATATCACATTACAGAAGAGAG...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTTGGCAGAAAATCCGTaGGCTTTTCTTGGAGGTTTG | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITLAENP*AFLGGL Trigger: CAAACCTCCAAGAAAAGCTCACGGATTTTCTGCCAA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTGAGATCAATTACATTTaGATCTGCCTGGCTTCCCAC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITEINYI*ICLASH Trigger: GTGGGAAGCCAGGCAGATGCAAATGTAATTGATCTC...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGATGGATTCTGGATATaGTTTCCTGCAGATCTCGCG | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIDGFWI*FPADLA Trigger: CGCGAGATCTGCAGGAAAGCATATCCAGAATCCATC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
||
CDS-3UTR GCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTTTGCTTCCATTTCTTaGCCCAGGTATGAACACCAG | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITFASIS*PRYEHQ Trigger: CTGGTGTTCATACCTGGGGCAAGAAATGGAAGCAAA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTGCTTGTTGGAGTATCTaGGCGTCATTAATCCCAGTA | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITACWSI*ASLIPV Trigger: TACTGGGATTAATGACGCCCAGATACTCCAACAAGC...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATTGTTCGATGGATTCTaGATATGCTTTCCTGCAGAT | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKLFDGF*ICFPAD Trigger: ATCTGCAGGAAAGCATATCCAGAATCCATCGAACAA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTCCTTCTCAAAGCGCTaGTTGTCCTCCTCAACAAAG | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAISFSKR*LSSSTK Trigger: CTTTGTTGAGGAGGACAACCAGCGCTTTGAGAAGGA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGGTGGAGTATCTTCTTaGGCCAACTTAACCAGCCTA | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIGGVSS*ANLTSL Trigger: TAGGCTGGTTAAGTTGGCCCAAGAAGATACTCCACC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAATAATCTGTTTCTGGTaGAGTATCTTCTTGGGCCAA | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKIICFW*SIFLGQ Trigger: TTGGCCCAAGAAGATACTCCACCAGAAACAGATTAT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTGGCATTCTTTGCAGTaGGGAAGGCTACTGCTAATT | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIWHSLQ*GRLLLI Trigger: AATTAGCAGTAGCCTTCCTCACTGCAAAGAATGCCA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR TCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTTGGCAGAAAATCCGTaGGCTTTTCTTGGAGGTTTG | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAILAENP*AFLGGL Trigger: CAAACCTCCAAGAAAAGCTCACGGATTTTCTGCCAA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTAATTACATTTGCATCTaGCTGGCTTCCCACGCTGAT | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAINYICI*LASHAD Trigger: ATCAGCGTGGGAAGCCAGGCAGATGCAAATGTAATT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTAATTCAGTGAACCAATaGTCCTGGCCTGACTTTCCT | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAINSVNQ*SWPDFP Trigger: AGGAAAGTCAGGCCAGGAGCATTGGTTCACTGAATT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTATTCCAACAAGGGCCTaGCCAGTCTCTTTATTAAAC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITIPTRA*PVSLLN Trigger: GTTTAATAAAGAGACTGGGCAGGCCCTTGTTGGAAT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTCTTTTCTTGGAGGTTTaGTTCCATTTCTTGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAILFLEV*FHFLPQ Trigger: CTGGGGCAAGAAATGGAAGCAAACCTCCAAGAAAAG...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGCTTGTTGGAGTATCTaGGCGTCATTAATCCCAGTA | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIACWSI*ASLIPV Trigger: TACTGGGATTAATGACGCCCAGATACTCCAACAAGC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGAATCTCAACTGCTCTaGACGGATCAACATACTTCC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIESQLL*TDQHTS Trigger: GGAAGTATGTTGATCCGTCCAGAGCAGTTGAGATTC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTCTTCAGCTTTCATTTaGAAGGCATCTTCCAACCAG | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITSSAFI*KASSNQ Trigger: CTGGTTGGAAGATGCCTTCCAAATGAAAGCTGAAGA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTACCATAGGGTTCTTTaGCTTCTCTTCATCCGTTTC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITYHRVL*LLFIRF Trigger: GAAACGGATGAAGAGAAGCCAAAGAACCCTATGGTA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTGCACACAGGTTTACTaGAGGCAAACTCCAATGCAT | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAICTQVY*RQTPMH Trigger: ATGCATTGGAGTTTGCCTCCAGTAAACCTGTGTGCA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTCTGCAAAACTGTCTCTaGCCCTTTATCTTCAAGATC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITLQNCL*PFIFKI Trigger: GATCTTGAAGATAAAGGGCCAGAGACAGTTTTGCAG...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTACGATAATCTGTTTCTaGTGGAGTATCTTCTTGGGC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITTIICF*WSIFLG Trigger: GCCCAAGAAGATACTCCACCAGAAACAGATTATCGT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTCCGTGAGCTTTTCTTaGAGGTTTGCTTCCATTTCT | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITSVSFS*RFASIS Trigger: AGAAATGGAAGCAAACCTCCAAGAAAAGCTCACGGA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGGTACCAACAAGAAGTaGAAACAGATACCTCAGTTC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIGTNKK*KQIPQF Trigger: GAACTGAGGTATCTGTTTGCACTTCTTGTTGGTACC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAAATGATTTTCTTTGGTaGCTGGTTCTGGATAAAGTA | + |
Preference number: 4 (lower is better) Translates to: NTKGLLLYASSNVHPMAKNDFLW*LVLDKV Trigger: TACTTTATCCAGAACCAGGCACCAAAGAAAATCATT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTATTCTTCAGACCGACTaGAGCTTTCTCTTGTCTTTT | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITILQTD*SFLLSF Trigger: AAAAGACAAGAGAAAGCTCCAGTCGGTCTGAAGAAT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTGGTCTTCCCAATGCCTaGTTAAATTCAAATCTTGAC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITGLPNA*LNSNLD Trigger: GTCAAGATTTGAATTTAACCAGGCATTGGGAAGACC...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTTGTTCGATGGATTCTaGATATGCTTTCCTGCAGAT | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITLFDGF*ICFPAD Trigger: ATCTGCAGGAAAGCATATCCAGAATCCATCGAACAA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTTAAGCAGTATGCACTaGCATTTCGATAACCACCGA | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAILSSMH*HFDNHR Trigger: TCGGTGGTTATCGAAATGCCAGTGCATACTGCTTAA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTCCGTGAGCTTTTCTTaGAGGTTTGCTTCCATTTCT | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAISVSFS*RFASIS Trigger: AGAAATGGAAGCAAACCTCCAAGAAAAGCTCACGGA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTAACTTTGGTGGCTCGTaGAAACCTTTAATCTCTGTA | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITNFGGS*KPLISV Trigger: TACAGAGATTAAAGGTTTCCACGAGCCACCAAAGTT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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3UTR CAA 72 bp | ATATGGTTCCATTATACTAACACAAAAGGGCTATTATaGTATGCATCATCCAATGTCCACCCCATGGCTAAA | + |
Preference number: 4 (lower is better) Translates to: IWFHYTNTKGLL*YASSNVHPMAK Trigger: TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTTAGTATAATGGAACCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR GCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGCATGCTTTATTTTCTaGTATGCTGGCTTCAAGAAC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIACFIF*YAGFKN Trigger: GTTCTTGAAGCCAGCATAGCAGAAAATAAAGCATGC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGGTCTTCCCAATGCCTaGTTAAATTCAAATCTTGAC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAIGLPNA*LNSNLD Trigger: GTCAAGATTTGAATTTAACCAGGCATTGGGAAGACC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTAGTTCAATTGTTCGATaGATTCTGGATATGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITSSIVR*ILDMLS Trigger: GGAAAGCATATCCAGAATCCATCGAACAATTGAACT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTCTCAATGATTTTCTTTaGTGCCTGGTTCTGGATAAA | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITLNDFL*CLVLDK Trigger: TTTATCCAGAACCAGGCACCAAAGAAAATCATTGAG...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTATTTCCAGTTTGGCTTaGGCAACTTTCATTATGTTG | + |
Preference number: 4 (lower is better) Translates to: LLYASSNVHPMAKLMYITISSLA*ATFIML Trigger: CAACATAATGAAAGTTGCCCAAGCCAAACTGGAAAT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTAACTTTGGTGGCTCGTaGAAACCTTTAATCTCTGTA | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAINFGGS*KPLISV Trigger: TACAGAGATTAAAGGTTTCCACGAGCCACCAAAGTT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTAGTTCAATTGTTCGATaGATTCTGGATATGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAISSIVR*ILDMLS Trigger: GGAAAGCATATCCAGAATCCATCGAACAATTGAACT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTCTTCCCATGAAGACTTaGTCACAGCAATATCATTAT | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAILPMKT*SQQYHY Trigger: ATAATGATATTGCTGTGACCAAGTCTTCATGGGAAG...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CCA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTCTCAATGATTTTCTTTaGTGCCTGGTTCTGGATAAA | + |
Preference number: 4 (lower is better) Translates to: SFVIIHWFRIKQGECHAILNDFL*CLVLDK Trigger: TTTATCCAGAACCAGGCACCAAAGAAAATCATTGAG...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | GATGCGGGTGAGGAGGAGCCGGGCAGATCTGAAGCACAGGGTCCCTaGTGTTCTGTTGTGCTTGGTAAGGACTGTGATGGTAGGGGGCCA | + |
Preference number: 5 (lower is better) Translates to: DAGEEEPGRSEAQGP*CSVVLGKDCDGRGP Trigger: TGGCCCCCTACCATCACAGTCCTTACCAAGCACAACAGAACAGCAGGGACCCTGTGCTTCAGATCTGCCCGGCTCCTCCTCACCCGCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 90 bp | TTGATGGCTGCTCTAGATAGTCTGCGCCTCCTGCTTGTGCTGTGGTaGCCGAAGCCTCTGCTTCCCGCAGTTTCGGCGCAGCTAGCAGCT | + |
Preference number: 5 (lower is better) Translates to: LMAALDSLRLLLVLW*PKPLLPAVSAQLAA Trigger: AGCTGCTAGCTGCGCCGAAACTGCGGGAAGCAGAGGCTTCGGCCACCACAGCACAAGCAGGAGGCGCAGACTATCTAGAGCAGCCATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 90 bp | TTCTTGATGGCTGCTCTAGATAGTCTGCGCCTCCTGCTTGTGCTGTaGTGGCCGAAGCCTCTGCTTCCCGCAGTTTCGGCGCAGCTAGCA | + |
Preference number: 5 (lower is better) Translates to: FLMAALDSLRLLLVL*WPKPLLPAVSAQLA Trigger: TGCTAGCTGCGCCGAAACTGCGGGAAGCAGAGGCTTCGGCCACCACAGCACAAGCAGGAGGCGCAGACTATCTAGAGCAGCCATCAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGCTGGCTAGAAGGTGGTaGGCTCGTGGTGTTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVLARRW*ARGVCR Trigger: CCTGCAAACACCACGAGCCAACCACCTTCTAGCCAG...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS TCA 90 bp | TTGGTGCCGGATGCATGGGCAAATCTGGAGGTATCCGAGACTGAGTaGAGGGTTTGTGAATCACTGACCTCAAGGGCAGGGCGGCACCTG | + |
Preference number: 5 (lower is better) Translates to: LVPDAWANLEVSETE*RVCESLTSRAGRHL Trigger: CAGGTGCCGCCCTGCCCTTGAGGTCAGTGATTCACAAACCCTTCACTCAGTCTCGGATACCTCCAGATTTGCCCATGCATCCGGCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | GAAGCCTCTGCTTCCCGCAGTTTCGGCGCAGCTAGCAGCTTTTCTTaGAGTGATCGTTGGGCAAGCTGCGTGTCCCATTCTTCCAGTTCC | + |
Preference number: 5 (lower is better) Translates to: EASASRSFGAASSFS*SDRWASCVSHSSSS Trigger: GGAACTGGAAGAATGGGACACGCAGCTTGCCCAACGATCACTGCAAGAAAAGCTGCTAGCTGCGCCGAAACTGCGGGAAGCAGAGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGGTCCCTGCTGTTCTGTaGTGCTTGGTAAGGACTGTG | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVVPAVL*CLVRTV Trigger: CACAGTCCTTACCAAGCACAACAGAACAGCAGGGAC...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGAGATCATGTGACGCCTaGGCAATCACTCGGAGCGTT | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVRSCDA*AITRSV Trigger: AACGCTCCGAGTGATTGCCAAGGCGTCACATGATCT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGCGCCATGATAACGCCTaGCATACTGGGGGTCATCAT | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVRHDNA*HTGGHH Trigger: ATGATGACCCCCAGTATGCAAGGCGTTATCATGGCG...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTGGTGGAGTATCTTCTaGGGCCAACTTAACCAGCCT | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVWWSIF*GQLNQP Trigger: AGGCTGGTTAAGTTGGCCCAAGAAGATACTCCACCA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 90 bp | TCCAGCGATGTAAACAGCTCTCCAGCACGCACAGTTCTTCCTCTGTaGTGTGCCTTGGTGCCGGATGCATGGGCAAATCTGGAGGTATCC | + |
Preference number: 5 (lower is better) Translates to: SSDVNSSPARTVLPL*CALVPDAWANLEVS Trigger: GGATACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATCACAGAGGAAGAACTGTGCGTGCTGGAGAGCTGTTTACATCGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | ACAGCTCTCCAGCACGCACAGTTCTTCCTCTGTGATGTGCCTTGGTaGCGGATGCATGGGCAAATCTGGAGGTATCCGAGACTGAGTGAA | + |
Preference number: 5 (lower is better) Translates to: TALQHAQFFLCDVPW*RMHGQIWRYPRLSE Trigger: TTCACTCAGTCTCGGATACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATCACAGAGGAAGAACTGTGCGTGCTGGAGAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | CGATGTAAACAGCTCTCCAGCACGCACAGTTCTTCCTCTGTGATGTaGCTTGGTGCCGGATGCATGGGCAAATCTGGAGGTATCCGAGAC | + |
Preference number: 5 (lower is better) Translates to: RCKQLSSTHSSSSVM*LGAGCMGKSGGIRD Trigger: GTCTCGGATACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATCACAGAGGAAGAACTGTGCGTGCTGGAGAGCTGTTTACATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | TTCGGCGCAGCTAGCAGCTTTTCTTGCAGTGATCGTTGGGCAAGCTaGGTGTCCCATTCTTCCAGTTCCTTCTCAAAGCGCTGGTTGTCC | + |
Preference number: 5 (lower is better) Translates to: FGAASSFSCSDRWAS*VSHSSSSFSKRWLS Trigger: GGACAACCAGCGCTTTGAGAAGGAACTGGAAGAATGGGACACGCAGCTTGCCCAACGATCACTGCAAGAAAAGCTGCTAGCTGCGCCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTTCTCAAAGCGCTGGTaGTCCTCCTCAACAAAGTCT | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVFSKRW*SSSTKS Trigger: AGACTTTGTTGAGGAGGACAACCAGCGCTTTGAGAA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGCGTACCCTCCCTCTTTaGCCTCAATCACAAATTTCC | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVRTLPL*PQSQIS Trigger: GGAAATTTGTGATTGAGGCAAAAGAGGGAGGGTACG...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CCA 90 bp | AAGTGGGGAATCTCCACCTCTACACCTTGCTGGCTAGAAGGTGGTTaGCTCGTGGTGTTTGCAGGTTTCGACTGCAAAACTGTCTCTGGC | + |
Preference number: 5 (lower is better) Translates to: KWGISTSTPCWLEGG*LVVFAGFDCKTVSG Trigger: GCCAGAGACAGTTTTGCAGTCGAAACCTGCAAACACCACGAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTGGAGATTCCCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGCTCTTCAGCTTTCATTaGGAAGGCATCTTCCAACCA | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVLFSFH*EGIFQP Trigger: TGGTTGGAAGATGCCTTCCAAATGAAAGCTGAAGAG...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 90 bp | GGCCTGCTCTTCATCGGTTATGCCCGTCTCCCTGAATGCCCTGTTTaGCTCCGCCAAACTCAAGGCAATCGCTCTCTGAAGATCATCTTT | + |
Preference number: 5 (lower is better) Translates to: GLLFIGYARLPECPV*LRQTQGNRSLKIIF Trigger: AAAGATGATCTTCAGAGAGCGATTGCCTTGAGTTTGGCGGAGTCAAACAGGGCATTCAGGGAGACGGGCATAACCGATGAAGAGCAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTCAACATACTTCCTCTaGGTACCAACAAGAAGTGCA | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVSTYFL*VPTRSA Trigger: TGCACTTCTTGTTGGTACCAAGAGGAAGTATGTTGA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTTGACAAGTCACTTCTaGATGGCTGCTCTAGATAGT | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVLTSHF*MAALDS Trigger: ACTATCTAGAGCAGCCATCAAGAAGTGACTTGTCAA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | TGCTGGCTAGAAGGTGGTTGGCTCGTGGTGTTTGCAGGTTTCGACTaGAAAACTGTCTCTGGCCCTTTATCTTCAAGATCATGTGACGCC | + |
Preference number: 5 (lower is better) Translates to: CWLEGGWLVVFAGFD*KTVSGPLSSRSCDA Trigger: GGCGTCACATGATCTTGAAGATAAAGGGCCAGAGACAGTTTTGCAGTCGAAACCTGCAAACACCACGAGCCAACCACCTTCTAGCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS GCA 90 bp | CACCTCTACACCTTGCTGGCTAGAAGGTGGTTGGCTCGTGGTGTTTaGAGGTTTCGACTGCAAAACTGTCTCTGGCCCTTTATCTTCAAG | + |
Preference number: 5 (lower is better) Translates to: HLYTLLARRWLARGV*RFRLQNCLWPFIFK Trigger: CTTGAAGATAAAGGGCCAGAGACAGTTTTGCAGTCGAAACCTGCAAACACCACGAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS GCA 90 bp | CTGTCATACACACTCCTGGATTTACCTATCGCCATGATAACGCCTTaGATACTGGGGGTCATCATGACCTCGTCATCGTACCCTCCCTCT | + |
Preference number: 5 (lower is better) Translates to: LSYTLLDLPIAMITP*ILGVIMTSSSYPPS Trigger: AGAGGGAGGGTACGATGACGAGGTCATGATGACCCCCAGTATGCAAGGCGTTATCATGGCGATAGGTAAATCCAGGAGTGTGTATGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CCA 90 bp | TGGGCAAGCTGCGTGTCCCATTCTTCCAGTTCCTTCTCAAAGCGCTaGTTGTCCTCCTCAACAAAGTCTCTCAAGTCTGGAGGTAAGGTT | + |
Preference number: 5 (lower is better) Translates to: WASCVSHSSSSFSKR*LSSSTKSLKSGGKV Trigger: AACCTTACCTCCAGACTTGAGAGACTTTGTTGAGGAGGACAACCAGCGCTTTGAGAAGGAACTGGAAGAATGGGACACGCAGCTTGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 90 bp | ATCACAAATTTCCCTAAGTGGGGAATCTCCACCTCTACACCTTGCTaGCTAGAAGGTGGTTGGCTCGTGGTGTTTGCAGGTTTCGACTGC | + |
Preference number: 5 (lower is better) Translates to: ITNFPKWGISTSTPC*LEGGWLVVFAGFDC Trigger: GCAGTCGAAACCTGCAAACACCACGAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTGGAGATTCCCCACTTAGGGAAATTTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAGTCTGCGCCTCCTGCTaGTGCTGTGGTGGCCGAAGC | + |
Preference number: 5 (lower is better) Translates to: NTKGLLLYASSNVHPMAKVCASC*CCGGRS Trigger: GCTTCGGCCACCACAGCACAAGCAGGAGGCGCAGAC...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGTTCACTTCTTCAGGTTaGATCATTTCCAGTTTGGCT | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVFTSSG*IISSLA Trigger: AGCCAAACTGGAAATGATCAAACCTGAAGAAGTGAA...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | CAGCAAGCAATCCCCGCGGCAGGTAGCCGGGGTGAGAACAGAGTTTCTATGGTGATAATAATTAAGCCATaGTTCACGTCTCCGTCCTCT | + |
Preference number: 5 (lower is better) Translates to: QQAIPAAGSRGENRVSMVIIIKP*FTSPSS Trigger: AGAGGACGGAGACGTGAACAATGGCTTAATTATTAT...CACCATAGAAACTCTGTTCTCACCCCGGCTACCTGCCGCGGGGATTGCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | TCAATCACAAATTTCCCTAAGTGGGGAATCTCCACCTCTACACCTTaGTGGCTAGAAGGTGGTTGGCTCGTGGTGTTTGCAGGTTTCGAC | + |
Preference number: 5 (lower is better) Translates to: SITNFPKWGISTSTP*WLEGGWLVVFAGFD Trigger: GTCGAAACCTGCAAACACCACGAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTGGAGATTCCCCACTTAGGGAAATTTGTGATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CCA 90 bp | TCATCTTTGTCATCTCCAGTGAGATCAATTACATTTGCATCTGCCTaGCTTCCCACGCTGATGTACCTGTCGTTGCCTGGAAGCGCTGTC | + |
Preference number: 5 (lower is better) Translates to: SSLSSPVRSITFASA*LPTLMYLSLPGSAV Trigger: GACAGCGCTTCCAGGCAACGACAGGTACATCAGCGTGGGAAGCCAGGCAGATGCAAATGTAATTGATCTCACTGGAGATGACAAAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 90 bp | TGCCGACTGCAAAACTGTCTCTGGCCCTTTATCTTCAAGATCATGTaGCGCCTTGGCAATCACTCGGAGCGTTTCTTCTTTCCAGTGCTT | + |
Preference number: 5 (lower is better) Translates to: CRLQNCLWPFIFKIM*RLGNHSERFFFPVL Trigger: AAGCACTGGAAAGAAGAAACGCTCCGAGTGATTGCCAAGGCGTCACATGATCTTGAAGATAAAGGGCCAGAGACAGTTTTGCAGTCGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023580.8 |
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CDS CCA 90 bp | GATAACCACCGAAAGAGTCCCTCACTAGCTCTTCCCATGAAGACTTaGTCACAGCAATATCATTATACTTCATCCACCGGCTCTCCCGGT | + |
Preference number: 5 (lower is better) Translates to: DNHRKSPSLALPMKT*SQQYHYTSSTGSPG Trigger: ACCGGGAGAGCCGGTGGATGAAGTATAATGATATTGCTGTGACCAAGTCTTCATGGGAAGAGCTAGTGAGGGACTCTTTCGGTGGTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGTCTGCGCCTCCTGCTaGTGCTGTGGTGGCCGAAGC | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAIVCASC*CCGGRS Trigger: GCTTCGGCCACCACAGCACAAGCAGGAGGCGCAGAC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 90 bp | TTTCGACTGCAAAACTGTCTCTGGCCCTTTATCTTCAAGATCATGTaGCGCCTTGGCAATCACTCGGAGCGTTTCTTCTTTCCAGTGCTT | + |
Preference number: 5 (lower is better) Translates to: FRLQNCLWPFIFKIM*RLGNHSERFFFPVL Trigger: AAGCACTGGAAAGAAGAAACGCTCCGAGTGATTGCCAAGGCGTCACATGATCTTGAAGATAAAGGGCCAGAGACAGTTTTGCAGTCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS GCA 90 bp | CTTGACAGTTCAAATGTTAATACCGGCGGCAATTCAGTGAACCAATaGTCCTGGCCTGACTTTCCTGAGTTATCGGAGTGTAAGGATTCG | + |
Preference number: 5 (lower is better) Translates to: LDSSNVNTGGNSVNQ*SWPDFPELSECKDS Trigger: CGAATCCTTACACTCCGATAACTCAGGAAAGTCAGGCCAGGAGCATTGGTTCACTGAATTGCCGCCGGTATTAACATTTGAACTGTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 90 bp | AGTTCAAATGTTAATACCGGCGGCAATTCAGTGAACCAATGCTCCTaGCCTGACTTTCCTGAGTTATCGGAGTGTAAGGATTCGATCTCC | + |
Preference number: 5 (lower is better) Translates to: SSNVNTGGNSVNQCS*PDFPELSECKDSIS Trigger: GGAGATCGAATCCTTACACTCCGATAACTCAGGAAAGTCAGGCCAGGAGCATTGGTTCACTGAATTGCCGCCGGTATTAACATTTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 90 bp | TTAGGAACTGTGCCTTGTCGTCTATGTACATTAAGCAGTATGCACTaGCATTTCGATAACCACCGAAAGAGTCCCTCACTAGCTCTTCCC | + |
Preference number: 5 (lower is better) Translates to: LGTVPCRLCTLSSMH*HFDNHRKSPSLALP Trigger: GGGAAGAGCTAGTGAGGGACTCTTTCGGTGGTTATCGAAATGCCAGTGCATACTGCTTAATGTACATAGACGACAAGGCACAGTTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 90 bp | GCAAAACTGTCTCTGGCCCTTTATCTTCAAGATCATGTGACGCCTTaGCAATCACTCGGAGCGTTTCTTCTTTCCAGTGCTTTGACAAGT | + |
Preference number: 5 (lower is better) Translates to: AKLSLALYLQDHVTP*QSLGAFLLSSALTS Trigger: ACTTGTCAAAGCACTGGAAAGAAGAAACGCTCCGAGTGATTGCCAAGGCGTCACATGATCTTGAAGATAAAGGGCCAGAGACAGTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 90 bp | CATGGAGGCGGTAAGGGACTTGGATCATGGATTTGTCCGAGTACATaGGTTCAATTGTTCGATGGATTCTGGATATGCTTTCCTGCAGAT | + |
Preference number: 5 (lower is better) Translates to: HGGGKGLGSWICPST*VQLFDGFWICFPAD Trigger: ATCTGCAGGAAAGCATATCCAGAATCCATCGAACAATTGAACTCATGTACTCGGACAAATCCATGATCCAAGTCCCTTACCGCCTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | TGCTCTGGACGGATCAACATACTTCCTCTTGGTACCAACAAGAAGTaGAAACAGATACCTCAGTTCCCGCATAAAAGGCAAATTCCGATG | + |
Preference number: 5 (lower is better) Translates to: CSGRINILPLGTNKK*KQIPQFPHKRQIPM Trigger: CATCGGAATTTGCCTTTTATGCGGGAACTGAGGTATCTGTTTGCACTTCTTGTTGGTACCAAGAGGAAGTATGTTGATCCGTCCAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | AAGTCTCTCAAGTCTGGAGGTAAGGTTTCCATTCCAACAAGGGCCTaGCCAGTCTCTTTATTAAACTCCTCTTGTATTAGGAACTGTGCC | + |
Preference number: 5 (lower is better) Translates to: KSLKSGGKVSIPTRA*PVSLLNSSCIRNCA Trigger: GGCACAGTTCCTAATACAAGAGGAGTTTAATAAAGAGACTGGGCAGGCCCTTGTTGGAATGGAAACCTTACCTCCAGACTTGAGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAGTCCCTGCTGTTCTGTaGTGCTTGGTAAGGACTGTG | + |
Preference number: 5 (lower is better) Translates to: NTKGLLLYASSNVHPMAKVPAVL*CLVRTV Trigger: CACAGTCCTTACCAAGCACAACAGAACAGCAGGGAC...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAAGATCATGTGACGCCTaGGCAATCACTCGGAGCGTT | + |
Preference number: 5 (lower is better) Translates to: NTKGLLLYASSNVHPMAKRSCDA*AITRSV Trigger: AACGCTCCGAGTGATTGCCAAGGCGTCACATGATCT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 90 bp | CTGAATGCCCTGTTTGACTCCGCCAAACTCAAGGCAATCGCTCTCTaGAGATCATCTTTGTCATCTCCAGTGAGATCAATTACATTTGCA | + |
Preference number: 5 (lower is better) Translates to: LNALFDSAKLKAIAL*RSSLSSPVRSITFA Trigger: TGCAAATGTAATTGATCTCACTGGAGATGACAAAGATGATCTTCAGAGAGCGATTGCCTTGAGTTTGGCGGAGTCAAACAGGGCATTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | TGGGCCAACTTAACCAGCCTAGAATACTCTAATTTAATTGCCGACTaGAAAACTGTCTCTGGCCCTTTATCTTCAAGATCATGTGACGCC | + |
Preference number: 5 (lower is better) Translates to: WANLTSLEYSNLIAD*KTVSGPLSSRSCDA Trigger: GGCGTCACATGATCTTGAAGATAAAGGGCCAGAGACAGTTTTGCAGTCGGCAATTAAATTAGAGTATTCTAGGCTGGTTAAGTTGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023580.8 |
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CDS-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATGGTGGAGTATCTTCTaGGGCCAACTTAACCAGCCT | + |
Preference number: 5 (lower is better) Translates to: NTKGLLLYASSNVHPMAKWWSIF*GQLNQP Trigger: AGGCTGGTTAAGTTGGCCCAAGAAGATACTCCACCA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 90 bp | GGGTTCTTTGGCTTCTCTTCATCCGTTTCCTCTTCAGCTTTCATTTaGAAGGCATCTTCCAACCAGTCCAATAACTTGTGTGTAAACTCA | + |
Preference number: 5 (lower is better) Translates to: GFFGFSSSVSSSAFI*KASSNQSNNLCVNS Trigger: TGAGTTTACACACAAGTTATTGGACTGGTTGGAAGATGCCTTCCAAATGAAAGCTGAAGAGGAAACGGATGAAGAGAAGCCAAAGAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTACTATCCTTCAGGGCTaGTTGGAGTATCTGGGCGTC | + |
Preference number: 5 (lower is better) Translates to: LLYASSNVHPMAKLMYITTILQG*LEYLGV Trigger: GACGCCCAGATACTCCAACAAGCCCTGAAGGATAGT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 90 bp | CTGCATGCCACTCCTCATATTCTTCCAAGTTCACTTCTTCAGGTTTaGTCATTTCCAGTTTGGCTTGGGCAACTTTCATTATGTTGTGAC | + |
Preference number: 5 (lower is better) Translates to: LHATPHILPSSLLQV*SFPVWLGQLSLCCD Trigger: GTCACAACATAATGAAAGTTGCCCAAGCCAAACTGGAAATGATCAAACCTGAAGAAGTGAACTTGGAAGAATATGAGGAGTGGCATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 90 bp | GTTTCGAGAATCCCTCCAAACTTCTATAGGTGTTCTCTTCAAGCATaGTTTATTTTCTGCTATGCTGGCTTCAAGAACTCTACTGATGGC | + |
Preference number: 5 (lower is better) Translates to: VSRIPPNFYRCSLQA*FIFCYAGFKNSTDG Trigger: GCCATCAGTAGAGTTCTTGAAGCCAGCATAGCAGAAAATAAAGCATGCTTGAAGAGAACACCTATAGAAGTTTGGAGGGATTCTCGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 90 bp | ACTTGGATCATGGATTTGTCCGAGTACATGAGTTCAATTGTTCGATaGATTCTGGATATGCTTTCCTGCAGATCTCGCGTGTCATTTTCT | + |
Preference number: 5 (lower is better) Translates to: TWIMDLSEYMSSIVR*ILDMLSCRSRVSFS Trigger: AGAAAATGACACGCGAGATCTGCAGGAAAGCATATCCAGAATCCATCGAACAATTGAACTCATGTACTCGGACAAATCCATGATCCAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTATCCTTCAGGGCTTGTaGGAGTATCTGGGCGTCATT | + |
Preference number: 5 (lower is better) Translates to: LLYASSNVHPMAKLMYITILQGL*EYLGVI Trigger: AATGACGCCCAGATACTCCAACAAGCCCTGAAGGAT...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTACTATCCTTCAGGGCTaGTTGGAGTATCTGGGCGTC | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAITILQG*LEYLGV Trigger: GACGCCCAGATACTCCAACAAGCCCTGAAGGATAGT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTATCCTTCAGGGCTTGTaGGAGTATCTGGGCGTCATT | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAIILQGL*EYLGVI Trigger: AATGACGCCCAGATACTCCAACAAGCCCTGAAGGAT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTGCTGCTGTGAGTCATaGGATTTGAAGGCATCCTTC | + |
Preference number: 5 (lower is better) Translates to: LLYASSNVHPMAKLMYITCCCES*DLKASF Trigger: GAAGGATGCCTTCAAATCCAATGACTCACAGCAGCA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAATTGACAAGTCACTTCTaGATGGCTGCTCTAGATAGT | + |
Preference number: 5 (lower is better) Translates to: NTKGLLLYASSNVHPMAKLTSHF*MAALDS Trigger: ACTATCTAGAGCAGCCATCAAGAAGTGACTTGTCAA...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTTCTTTCCAGTGCTTaGACAAGTCACTTCTTGATG | + |
Preference number: 5 (lower is better) Translates to: NTKGLLLYASSNVHPMAKLLSSA*TSHFLM Trigger: CATCAAGAAGTGACTTGTCAAAGCACTGGAAAGAAG...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTGCTGCTGTGAGTCATaGGATTTGAAGGCATCCTTC | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAICCCES*DLKASF Trigger: GAAGGATGCCTTCAAATCCAATGACTCACAGCAGCA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAAACCAGTCCAATAACTaGTGTGTAAACTCACTCACA | + |
Preference number: 5 (lower is better) Translates to: NTKGLLLYASSNVHPMAKNQSNN*CVNSLT Trigger: TGTGAGTGAGTTTACACACAAGTTATTGGACTGGTT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTCTCTTCAGCTTTCATTaGGAAGGCATCTTCCAACCA | + |
Preference number: 5 (lower is better) Translates to: LLYASSNVHPMAKLMYITLFSFH*EGIFQP Trigger: TGGTTGGAAGATGCCTTCCAAATGAAAGCTGAAGAG...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAATTAGGAACTGTGCCTaGTCGTCTATGTACATTAAG | + |
Preference number: 5 (lower is better) Translates to: NTKGLLLYASSNVHPMAKIRNCA*SSMYIK Trigger: CTTAATGTACATAGACGACAAGGCACAGTTCCTAAT...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTTCTCAAAGCGCTGGTaGTCCTCCTCAACAAAGTCT | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAIFSKRW*SSSTKS Trigger: AGACTTTGTTGAGGAGGACAACCAGCGCTTTGAGAA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTAGTAGGAAGGTAACTTaGGTGGCTCGTGGAAACCTT | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAISRKVT*VARGNL Trigger: AAGGTTTCCACGAGCCACCAAAGTTACCTTCCTACT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTGACTGGAGCTTTCTCTaGTCTTTTTCTGTCATAGGG | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAIDWSFL*SFSVIG Trigger: CCCTATGACAGAAAAAGACAAGAGAAAGCTCCAGTC...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | AACACAAAAGGGCTATTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAAGTAAATCTTGAGCATTaGATGGAGGCTTGTAATTCA | + |
Preference number: 5 (lower is better) Translates to: NTKGLLLYASSNVHPMAKVNLEH*MEACNS Trigger: TGAATTACAAGCCTCCATCAAATGCTCAAGATTTAC...TTTAGCCATGGGGTGGACATTGGATGATGCATACAATAATAGCCCTTTTGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTCAACATACTTCCTCTaGGTACCAACAAGAAGTGCA | + |
Preference number: 5 (lower is better) Translates to: LLYASSNVHPMAKLMYITSTYFL*VPTRSA Trigger: TGCACTTCTTGTTGGTACCAAGAGGAAGTATGTTGA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTATCCGTGAGCTTTTCTaGGAGGTTTGCTTCCATTTC | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAIIRELF*EVCFHF Trigger: GAAATGGAAGCAAACCTCCAAGAAAAGCTCACGGAT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTTCTTCCCATGAAGACTaGGTCACAGCAATATCATTA | + |
Preference number: 5 (lower is better) Translates to: LLYASSNVHPMAKLMYITSSHED*VTAISL Trigger: TAATGATATTGCTGTGACCAAGTCTTCATGGGAAGA...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTCTTCTTTCCAGTGCTTaGACAAGTCACTTCTTGATG | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAILLSSA*TSHFLM Trigger: CATCAAGAAGTGACTTGTCAAAGCACTGGAAAGAAG...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTCATTTCCAGTTTGGCTaGGGCAACTTTCATTATGTT | + |
Preference number: 5 (lower is better) Translates to: LLYASSNVHPMAKLMYITHFQFG*GNFHYV Trigger: AACATAATGAAAGTTGCCCAAGCCAAACTGGAAATG...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TTATTGTATGCATCATCCAATGTCCACCCCATGGCTAAACTCATGTATATAACTGTAAATCTTGAGCATTaGATGGAGGCTTGTAATTCA | + |
Preference number: 5 (lower is better) Translates to: LLYASSNVHPMAKLMYITVNLEH*MEACNS Trigger: TGAATTACAAGCCTCCATCAAATGCTCAAGATTTAC...AGTTATATACATGAGTTTAGCCATGGGGTGGACATTGGATGATGCATACAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTAACCAGTCCAATAACTaGTGTGTAAACTCACTCACA | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAINQSNN*CVNSLT Trigger: TGTGAGTGAGTTTACACACAAGTTATTGGACTGGTT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTCTTCCCATGAAGACTaGGTCACAGCAATATCATTA | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAISSHED*VTAISL Trigger: TAATGATATTGCTGTGACCAAGTCTTCATGGGAAGA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTTTCACTTCTTCAGGTTaGATCATTTCCAGTTTGGCT | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAIFTSSG*IISSLA Trigger: AGCCAAACTGGAAATGATCAAACCTGAAGAAGTGAA...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS-3UTR CAA 90 bp | TCATTTGTAATTATACATTGGTTTCGGATAAAACAAGGTGAGTGCCATGCGATTATAATAATTAAGCCATaGTTCACGTCTCCGTCCTCT | + |
Preference number: 5 (lower is better) Translates to: SFVIIHWFRIKQGECHAIIIIKP*FTSPSS Trigger: AGAGGACGGAGACGTGAACAATGGCTTAATTATTAT...AATCGCATGGCACTCACCTTGTTTTATCCGAAACCAATGTATAATTACAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | GCTCTAGATAGTCTGCGCCTCCTGCTTGTGCTGTGGTaGCCGAAGCCTCTGCTTCCCGCAGTTTCGGCGCAG | + |
Preference number: 6 (lower is better) Translates to: ALDSLRLLLVLW*PKPLLPAVSAQ Trigger: CTGCGCCGAAACTGCGGGAAGCAGAGGCTTCGGCCACCACAGCACAAGCAGGAGGCGCAGACTATCTAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | GCTGCTCTAGATAGTCTGCGCCTCCTGCTTGTGCTGTaGTGGCCGAAGCCTCTGCTTCCCGCAGTTTCGGCG | + |
Preference number: 6 (lower is better) Translates to: AALDSLRLLLVL*WPKPLLPAVSA Trigger: CGCCGAAACTGCGGGAAGCAGAGGCTTCGGCCACCACAGCACAAGCAGGAGGCGCAGACTATCTAGAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | TGCCTGGCTTCCCACGCTGATGTACCTGTCGTTGCCTaGAAGCGCTGTCTGGTAATAGCCTGTCTCCTCCTG | + |
Preference number: 6 (lower is better) Translates to: CLASHADVPVVA*KRCLVIACLLL Trigger: CAGGAGGAGACAGGCTATTACCAGACAGCGCTTCCAGGCAACGACAGGTACATCAGCGTGGGAAGCCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 72 bp | CGGGCAGATCTGAAGCACAGGGTCCCTGCTGTTCTGTaGTGCTTGGTAAGGACTGTGATGGTAGGGGGCCAC | + |
Preference number: 6 (lower is better) Translates to: RADLKHRVPAVL*CLVRTVMVGGH Trigger: GTGGCCCCCTACCATCACAGTCCTTACCAAGCACAACAGAACAGCAGGGACCCTGTGCTTCAGATCTGCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | CAGCTCTCCAGCACGCACAGTTCTTCCTCTGTGATGTaGCTTGGTGCCGGATGCATGGGCAAATCTGGAGGT | + |
Preference number: 6 (lower is better) Translates to: QLSSTHSSSSVM*LGAGCMGKSGG Trigger: ACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATCACAGAGGAAGAACTGTGCGTGCTGGAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | GCTTCCCGCAGTTTCGGCGCAGCTAGCAGCTTTTCTTaGAGTGATCGTTGGGCAAGCTGCGTGTCCCATTCT | + |
Preference number: 6 (lower is better) Translates to: ASRSFGAASSFS*SDRWASCVSHS Trigger: AGAATGGGACACGCAGCTTGCCCAACGATCACTGCAAGAAAAGCTGCTAGCTGCGCCGAAACTGCGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | CTCCAGCACGCACAGTTCTTCCTCTGTGATGTGCCTTaGTGCCGGATGCATGGGCAAATCTGGAGGTATCCG | + |
Preference number: 6 (lower is better) Translates to: LQHAQFFLCDVP*CRMHGQIWRYP Trigger: CGGATACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATCACAGAGGAAGAACTGTGCGTGCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | CAGCACGCACAGTTCTTCCTCTGTGATGTGCCTTGGTaGCGGATGCATGGGCAAATCTGGAGGTATCCGAGA | + |
Preference number: 6 (lower is better) Translates to: QHAQFFLCDVPW*RMHGQIWRYPR Trigger: TCTCGGATACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATCACAGAGGAAGAACTGTGCGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | GGGAATCTCCACCTCTACACCTTGCTGGCTAGAAGGTaGTTGGCTCGTGGTGTTTGCAGGTTTCGACTGCAA | + |
Preference number: 6 (lower is better) Translates to: GNLHLYTLLARR*LARGVCRFRLQ Trigger: TTGCAGTCGAAACCTGCAAACACCACGAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTGGAGATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CCA 72 bp | TTCCCTAAGTGGGGAATCTCCACCTCTACACCTTGCTaGCTAGAAGGTGGTTGGCTCGTGGTGTTTGCAGGT | + |
Preference number: 6 (lower is better) Translates to: FPKWGISTSTPC*LEGGWLVVFAG Trigger: ACCTGCAAACACCACGAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTGGAGATTCCCCACTTAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS TCA 72 bp | GATCAATTACATTTGCATCTGCCTGGCTTCCCACGCTaGTGTACCTGTCGTTGCCTGGAAGCGCTGTCTGGT | + |
Preference number: 6 (lower is better) Translates to: DQLHLHLPGFPR*CTCRCLEALSG Trigger: ACCAGACAGCGCTTCCAGGCAACGACAGGTACATCAGCGTGGGAAGCCAGGCAGATGCAAATGTAATTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 72 bp | TTCATCGGTTATGCCCGTCTCCCTGAATGCCCTGTTTaGCTCCGCCAAACTCAAGGCAATCGCTCTCTGAAG | + |
Preference number: 6 (lower is better) Translates to: FIGYARLPECPV*LRQTQGNRSLK Trigger: CTTCAGAGAGCGATTGCCTTGAGTTTGGCGGAGTCAAACAGGGCATTCAGGGAGACGGGCATAACCGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 72 bp | GATGCATGGGCAAATCTGGAGGTATCCGAGACTGAGTaGAGGGTTTGTGAATCACTGACCTCAAGGGCAGGG | + |
Preference number: 6 (lower is better) Translates to: DAWANLEVSETE*RVCESLTSRAG Trigger: CCCTGCCCTTGAGGTCAGTGATTCACAAACCCTTCACTCAGTCTCGGATACCTCCAGATTTGCCCATGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | GCTAGCAGCTTTTCTTGCAGTGATCGTTGGGCAAGCTaGGTGTCCCATTCTTCCAGTTCCTTCTCAAAGCGC | + |
Preference number: 6 (lower is better) Translates to: ASSFSCSDRWAS*VSHSSSSFSKR Trigger: GCGCTTTGAGAAGGAACTGGAAGAATGGGACACGCAGCTTGCCCAACGATCACTGCAAGAAAAGCTGCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 90 bp | CCTGTCATACACACTCCTGGATTTACCTATCGCCATGATAACGCCTaGCATACTGGGGGTCATCATGACCTCGTCATCGTACCCTCCCTC | + |
Preference number: 6 (lower is better) Translates to: PVIHTPGFTYRHDNA*HTGGHHDLVIVPSL Trigger: GAGGGAGGGTACGATGACGAGGTCATGATGACCCCCAGTATGCAAGGCGTTATCATGGCGATAGGTAAATCCAGGAGTGTGTATGACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CAA 90 bp | GCAAGCTGCGTGTCCCATTCTTCCAGTTCCTTCTCAAAGCGCTGGTaGTCCTCCTCAACAAAGTCTCTCAAGTCTGGAGGTAAGGTTTCC | + |
Preference number: 6 (lower is better) Translates to: ASCVSHSSSSFSKRW*SSSTKSLKSGGKVS Trigger: GGAAACCTTACCTCCAGACTTGAGAGACTTTGTTGAGGAGGACAACCAGCGCTTTGAGAAGGAACTGGAAGAATGGGACACGCAGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 90 bp | TCACTCGGAGCGTTTCTTCTTTCCAGTGCTTTGACAAGTCACTTCTaGATGGCTGCTCTAGATAGTCTGCGCCTCCTGCTTGTGCTGTGG | + |
Preference number: 6 (lower is better) Translates to: SLGAFLLSSALTSHF*MAALDSLRLLLVLW Trigger: CCACAGCACAAGCAGGAGGCGCAGACTATCTAGAGCAGCCATCAAGAAGTGACTTGTCAAAGCACTGGAAAGAAGAAACGCTCCGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 90 bp | GTGACGCCTTGGCAATCACTCGGAGCGTTTCTTCTTTCCAGTGCTTaGACAAGTCACTTCTTGATGGCTGCTCTAGATAGTCTGCGCCTC | + |
Preference number: 6 (lower is better) Translates to: VTPWQSLGAFLLSSA*TSHFLMAALDSLRL Trigger: GAGGCGCAGACTATCTAGAGCAGCCATCAAGAAGTGACTTGTCAAAGCACTGGAAAGAAGAAACGCTCCGAGTGATTGCCAAGGCGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | AATTTCCCTAAGTGGGGAATCTCCACCTCTACACCTTaGTGGCTAGAAGGTGGTTGGCTCGTGGTGTTTGCA | + |
Preference number: 6 (lower is better) Translates to: NFPKWGISTSTP*WLEGGWLVVFA Trigger: TGCAAACACCACGAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTGGAGATTCCCCACTTAGGGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CCA 72 bp | TGTGATGTGCCTTGGTGCCGGATGCATGGGCAAATCTaGAGGTATCCGAGACTGAGTGAAGGGTTTGTGAAT | + |
Preference number: 6 (lower is better) Translates to: CDVPWCRMHGQI*RYPRLSEGFVN Trigger: ATTCACAAACCCTTCACTCAGTCTCGGATACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | ATCTCCACCTCTACACCTTGCTGGCTAGAAGGTGGTTaGCTCGTGGTGTTTGCAGGTTTCGACTGCAAAACT | + |
Preference number: 6 (lower is better) Translates to: ISTSTPCWLEGG*LVVFAGFDCKT Trigger: AGTTTTGCAGTCGAAACCTGCAAACACCACGAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CAA 72 bp | AATCTCCACCTCTACACCTTGCTGGCTAGAAGGTGGTaGGCTCGTGGTGTTTGCAGGTTTCGACTGCAAAAC | + |
Preference number: 6 (lower is better) Translates to: NLHLYTLLARRW*ARGVCRFRLQN Trigger: GTTTTGCAGTCGAAACCTGCAAACACCACGAGCCAACCACCTTCTAGCCAGCAAGGTGTAGAGGTGGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS GCA 72 bp | ACACTCCTGGATTTACCTATCGCCATGATAACGCCTTaGATACTGGGGGTCATCATGACCTCGTCATCGTAC | + |
Preference number: 6 (lower is better) Translates to: TLLDLPIAMITP*ILGVIMTSSSY Trigger: GTACGATGACGAGGTCATGATGACCCCCAGTATGCAAGGCGTTATCATGGCGATAGGTAAATCCAGGAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CCA 72 bp | TCATCTCCAGTGAGATCAATTACATTTGCATCTGCCTaGCTTCCCACGCTGATGTACCTGTCGTTGCCTGGA | + |
Preference number: 6 (lower is better) Translates to: SSPVRSITFASA*LPTLMYLSLPG Trigger: TCCAGGCAACGACAGGTACATCAGCGTGGGAAGCCAGGCAGATGCAAATGTAATTGATCTCACTGGAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | TGCGTGTCCCATTCTTCCAGTTCCTTCTCAAAGCGCTaGTTGTCCTCCTCAACAAAGTCTCTCAAGTCTGGA | + |
Preference number: 6 (lower is better) Translates to: CVSHSSSSFSKR*LSSSTKSLKSG Trigger: TCCAGACTTGAGAGACTTTGTTGAGGAGGACAACCAGCGCTTTGAGAAGGAACTGGAAGAATGGGACACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 72 bp | GTGTCCCATTCTTCCAGTTCCTTCTCAAAGCGCTGGTaGTCCTCCTCAACAAAGTCTCTCAAGTCTGGAGGT | + |
Preference number: 6 (lower is better) Translates to: VSHSSSSFSKRW*SSSTKSLKSGG Trigger: ACCTCCAGACTTGAGAGACTTTGTTGAGGAGGACAACCAGCGCTTTGAGAAGGAACTGGAAGAATGGGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 72 bp | GTCTCTGGCCCTTTATCTTCAAGATCATGTGACGCCTaGGCAATCACTCGGAGCGTTTCTTCTTTCCAGTGC | + |
Preference number: 6 (lower is better) Translates to: VSGPLSSRSCDA*AITRSVSSFQC Trigger: GCACTGGAAAGAAGAAACGCTCCGAGTGATTGCCAAGGCGTCACATGATCTTGAAGATAAAGGGCCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 72 bp | CACACTCCTGGATTTACCTATCGCCATGATAACGCCTaGCATACTGGGGGTCATCATGACCTCGTCATCGTA | + |
Preference number: 6 (lower is better) Translates to: HTPGFTYRHDNA*HTGGHHDLVIV Trigger: TACGATGACGAGGTCATGATGACCCCCAGTATGCAAGGCGTTATCATGGCGATAGGTAAATCCAGGAGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CAA 90 bp | CCAGCAGGTGTTGCCGACATTCTTCAGACCGACTGGAGCTTTCTCTaGTCTTTTTCTGTCATAGGGGTTTCGAGAATCCCTCCAAACTTC | + |
Preference number: 6 (lower is better) Translates to: PAGVADILQTDWSFL*SFSVIGVSRIPPNF Trigger: GAAGTTTGGAGGGATTCTCGAAACCCCTATGACAGAAAAAGACAAGAGAAAGCTCCAGTCGGTCTGAAGAATGTCGGCAACACCTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 72 bp | ATCTGGGCGTCATTAATCCCAGTAATTTCTCTCAGCTaGTTCAAAAATGTCTGCTGGTGCTTCTGCGCCGCG | + |
Preference number: 6 (lower is better) Translates to: IWASLIPVISLS*FKNVCWCFCAA Trigger: CGCGGCGCAGAAGCACCAGCAGACATTTTTGAATCAGCTGAGAGAAATTACTGGGATTAATGACGCCCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 72 bp | CTTTATTTTCTGCTATGCTGGCTTCAAGAACTCTACTaGTGGCCTGCTCTTCATCGGTTATGCCCGTCTCCC | + |
Preference number: 6 (lower is better) Translates to: LYFLLCWLQELY*WPALHRLCPSP Trigger: GGGAGACGGGCATAACCGATGAAGAGCAGGCCATCAGTAGAGTTCTTGAAGCCAGCATAGCAGAAAATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | GCCTTGGCAATCACTCGGAGCGTTTCTTCTTTCCAGTaGTTTGACAAGTCACTTCTTGATGGCTGCTCTAGA | + |
Preference number: 6 (lower is better) Translates to: ALAITRSVSSFQ*FDKSLLDGCSR Trigger: TCTAGAGCAGCCATCAAGAAGTGACTTGTCAAAGCACTGGAAAGAAGAAACGCTCCGAGTGATTGCCAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | TCCGTGAGCTTTTCTTGGAGGTTTGCTTCCATTTCTTaGCCCAGGTATGAACACCAGCGATTCCTCATGTCT | + |
Preference number: 6 (lower is better) Translates to: SVSFSWRFASIS*PRYEHQRFLMS Trigger: AGACATGAGGAATCGCTGGTGTTCATACCTGGGGCAAGAAATGGAAGCAAACCTCCAAGAAAAGCTCACGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | GAAGGTGGTTGGCTCGTGGTGTTTGCAGGTTTCGACTaGAAAACTGTCTCTGGCCCTTTATCTTCAAGATCA | + |
Preference number: 6 (lower is better) Translates to: EGGWLVVFAGFD*KTVSGPLSSRS Trigger: TGATCTTGAAGATAAAGGGCCAGAGACAGTTTTGCAGTCGAAACCTGCAAACACCACGAGCCAACCACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239066.2 |
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CDS CCA 72 bp | TCTCTGGCCCTTTATCTTCAAGATCATGTGACGCCTTaGCAATCACTCGGAGCGTTTCTTCTTTCCAGTGCT | + |
Preference number: 6 (lower is better) Translates to: SLALYLQDHVTP*QSLGAFLLSSA Trigger: AGCACTGGAAAGAAGAAACGCTCCGAGTGATTGCCAAGGCGTCACATGATCTTGAAGATAAAGGGCCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 72 bp | GCGTTTCTTCTTTCCAGTGCTTTGACAAGTCACTTCTaGATGGCTGCTCTAGATAGTCTGCGCCTCCTGCTT | + |
Preference number: 6 (lower is better) Translates to: AFLLSSALTSHF*MAALDSLRLLL Trigger: AAGCAGGAGGCGCAGACTATCTAGAGCAGCCATCAAGAAGTGACTTGTCAAAGCACTGGAAAGAAGAAACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 90 bp | TGCAAAACTGTCTCTGGCCCTTTATCTTCAAGATCATGTGACGCCTaGGCAATCACTCGGAGCGTTTCTTCTTTCCAGTGCTTTGACAAG | + |
Preference number: 6 (lower is better) Translates to: CKTVSGPLSSRSCDA*AITRSVSSFQCFDK Trigger: CTTGTCAAAGCACTGGAAAGAAGAAACGCTCCGAGTGATTGCCAAGGCGTCACATGATCTTGAAGATAAAGGGCCAGAGACAGTTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 90 bp | AAGGGCAGAAAGGGAACGATAAACTCATTCATAATAATTAAGCCATaGTTCACGTCTCCGTCCTCTCCAGACTCAAACAGCTCGGCCGCT | + |
Preference number: 6 (lower is better) Translates to: KGRKGTINSFIIIKP*FTSPSSPDSNSSAA Trigger: AGCGGCCGAGCTGTTTGAGTCTGGAGAGGACGGAGACGTGAACAATGGCTTAATTATTATGAATGAGTTTATCGTTCCCTTTCTGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 72 bp | ACTCACTCACATCTTGCTGCTGTGAGTCATTGGATTTaGAGGCATCCTTCAGAATCTCAACTGCTCTGGACG | + |
Preference number: 6 (lower is better) Translates to: THSHLAAVSHWI*RHPSESQLLWT Trigger: CGTCCAGAGCAGTTGAGATTCTGAAGGATGCCTTCAAATCCAATGACTCACAGCAGCAAGATGTGAGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | TCAAATGTTAATACCGGCGGCAATTCAGTGAACCAATaGTCCTGGCCTGACTTTCCTGAGTTATCGGAGTGT | + |
Preference number: 6 (lower is better) Translates to: SNVNTGGNSVNQ*SWPDFPELSEC Trigger: ACACTCCGATAACTCAGGAAAGTCAGGCCAGGAGCATTGGTTCACTGAATTGCCGCCGGTATTAACATTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | AAACCAGCAGGTGTTGCCGACATTCTTCAGACCGACTaGAGCTTTCTCTTGTCTTTTTCTGTCATAGGGGTT | + |
Preference number: 6 (lower is better) Translates to: KPAGVADILQTD*SFLLSFSVIGV Trigger: AACCCCTATGACAGAAAAAGACAAGAGAAAGCTCCAGTCGGTCTGAAGAATGTCGGCAACACCTGCTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | CGAAAGAGTCCCTCACTAGCTCTTCCCATGAAGACTTaGTCACAGCAATATCATTATACTTCATCCACCGGC | + |
Preference number: 6 (lower is better) Translates to: RKSPSLALPMKT*SQQYHYTSSTG Trigger: GCCGGTGGATGAAGTATAATGATATTGCTGTGACCAAGTCTTCATGGGAAGAGCTAGTGAGGGACTCTTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 72 bp | CCGAAAGAGTCCCTCACTAGCTCTTCCCATGAAGACTaGGTCACAGCAATATCATTATACTTCATCCACCGG | + |
Preference number: 6 (lower is better) Translates to: PKESLTSSSHED*VTAISLYFIHR Trigger: CCGGTGGATGAAGTATAATGATATTGCTGTGACCAAGTCTTCATGGGAAGAGCTAGTGAGGGACTCTTTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 90 bp | TCCTTCAGAATCTCAACTGCTCTGGACGGATCAACATACTTCCTCTaGGTACCAACAAGAAGTGCAAACAGATACCTCAGTTCCCGCATA | + |
Preference number: 6 (lower is better) Translates to: SFRISTALDGSTYFL*VPTRSANRYLSSRI Trigger: TATGCGGGAACTGAGGTATCTGTTTGCACTTCTTGTTGGTACCAAGAGGAAGTATGTTGATCCGTCCAGAGCAGTTGAGATTCTGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 72 bp | CAAAACTGTCTCTGGCCCTTTATCTTCAAGATCATGTaGCGCCTTGGCAATCACTCGGAGCGTTTCTTCTTT | + |
Preference number: 6 (lower is better) Translates to: QNCLWPFIFKIM*RLGNHSERFFF Trigger: AAAGAAGAAACGCTCCGAGTGATTGCCAAGGCGTCACATGATCTTGAAGATAAAGGGCCAGAGACAGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | GTCATTGGATTTGAAGGCATCCTTCAGAATCTCAACTaGTCTGGACGGATCAACATACTTCCTCTTGGTACC | + |
Preference number: 6 (lower is better) Translates to: VIGFEGILQNLN*SGRINILPLGT Trigger: GGTACCAAGAGGAAGTATGTTGATCCGTCCAGAGCAGTTGAGATTCTGAAGGATGCCTTCAAATCCAATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | GTGCCTTGTCGTCTATGTACATTAAGCAGTATGCACTaGCATTTCGATAACCACCGAAAGAGTCCCTCACTA | + |
Preference number: 6 (lower is better) Translates to: VPCRLCTLSSMH*HFDNHRKSPSL Trigger: TAGTGAGGGACTCTTTCGGTGGTTATCGAAATGCCAGTGCATACTGCTTAATGTACATAGACGACAAGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 72 bp | AACTCACTCACATCTTGCTGCTGTGAGTCATTGGATTaGAAGGCATCCTTCAGAATCTCAACTGCTCTGGAC | + |
Preference number: 6 (lower is better) Translates to: NSLTSCCCESLD*KASFRISTALD Trigger: GTCCAGAGCAGTTGAGATTCTGAAGGATGCCTTCAAATCCAATGACTCACAGCAGCAAGATGTGAGTGAGTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 72 bp | TGGCAATCACTCGGAGCGTTTCTTCTTTCCAGTGCTTaGACAAGTCACTTCTTGATGGCTGCTCTAGATAGT | + |
Preference number: 6 (lower is better) Translates to: WQSLGAFLLSSA*TSHFLMAALDS Trigger: ACTATCTAGAGCAGCCATCAAGAAGTGACTTGTCAAAGCACTGGAAAGAAGAAACGCTCCGAGTGATTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 72 bp | TTGACAGTTCAAATGTTAATACCGGCGGCAATTCAGTaGACCAATGCTCCTGGCCTGACTTTCCTGAGTTAT | + |
Preference number: 6 (lower is better) Translates to: LTVQMLIPAAIQ*TNAPGLTFLSY Trigger: ATAACTCAGGAAAGTCAGGCCAGGAGCATTGGTTCACTGAATTGCCGCCGGTATTAACATTTGAACTGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | CGGATCAACATACTTCCTCTTGGTACCAACAAGAAGTaGAAACAGATACCTCAGTTCCCGCATAAAAGGCAA | + |
Preference number: 6 (lower is better) Translates to: RINILPLGTNKK*KQIPQFPHKRQ Trigger: TTGCCTTTTATGCGGGAACTGAGGTATCTGTTTGCACTTCTTGTTGGTACCAAGAGGAAGTATGTTGATCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | TCTCAACTGCTCTGGACGGATCAACATACTTCCTCTTaGTACCAACAAGAAGTGCAAACAGATACCTCAGTT | + |
Preference number: 6 (lower is better) Translates to: SQLLWTDQHTSS*YQQEVQTDTSV Trigger: AACTGAGGTATCTGTTTGCACTTCTTGTTGGTACCAAGAGGAAGTATGTTGATCCGTCCAGAGCAGTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CCA 72 bp | ATGGATTTGTCCGAGTACATGAGTTCAATTGTTCGATaGATTCTGGATATGCTTTCCTGCAGATCTCGCGTG | + |
Preference number: 6 (lower is better) Translates to: MDLSEYMSSIVR*ILDMLSCRSRV Trigger: CACGCGAGATCTGCAGGAAAGCATATCCAGAATCCATCGAACAATTGAACTCATGTACTCGGACAAATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | AGTTCAATTGTTCGATGGATTCTGGATATGCTTTCCTaGAGATCTCGCGTGTCATTTTCTATTTCCGTCCTC | + |
Preference number: 6 (lower is better) Translates to: SSIVRWILDMLS*RSRVSFSISVL Trigger: GAGGACGGAAATAGAAAATGACACGCGAGATCTGCAGGAAAGCATATCCAGAATCCATCGAACAATTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS TCA 72 bp | GGTAAGGGACTTGGATCATGGATTTGTCCGAGTACATaGGTTCAATTGTTCGATGGATTCTGGATATGCTTT | + |
Preference number: 6 (lower is better) Translates to: GKGLGSWICPST*VQLFDGFWICF Trigger: AAAGCATATCCAGAATCCATCGAACAATTGAACTCATGTACTCGGACAAATCCATGATCCAAGTCCCTTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 72 bp | AAGGGAACGATAAACTCATTCATAATAATTAAGCCATaGTTCACGTCTCCGTCCTCTCCAGACTCAAACAGC | + |
Preference number: 6 (lower is better) Translates to: KGTINSFIIIKP*FTSPSSPDSNS Trigger: GCTGTTTGAGTCTGGAGAGGACGGAGACGTGAACAATGGCTTAATTATTATGAATGAGTTTATCGTTCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS GCA 72 bp | TTAACCAGCCTAGAATACTCTAATTTAATTGCCGACTaGAAAACTGTCTCTGGCCCTTTATCTTCAAGATCA | + |
Preference number: 6 (lower is better) Translates to: LTSLEYSNLIAD*KTVSGPLSSRS Trigger: TGATCTTGAAGATAAAGGGCCAGAGACAGTTTTGCAGTCGGCAATTAAATTAGAGTATTCTAGGCTGGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023580.8 |
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CDS CAA 72 bp | TCTTTATTAAACTCCTCTTGTATTAGGAACTGTGCCTaGTCGTCTATGTACATTAAGCAGTATGCACTGGCA | + |
Preference number: 6 (lower is better) Translates to: SLLNSSCIRNCA*SSMYIKQYALA Trigger: TGCCAGTGCATACTGCTTAATGTACATAGACGACAAGGCACAGTTCCTAATACAAGAGGAGTTTAATAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |
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CDS CAA 90 bp | TTCTTCCAAGTTCACTTCTTCAGGTTTGATCATTTCCAGTTTGGCTaGGGCAACTTTCATTATGTTGTGACACCTTTCATCAAAACTCAA | + |
Preference number: 6 (lower is better) Translates to: FFQVHFFRFDHFQFG*GNFHYVVTPFIKTQ Trigger: TTGAGTTTTGATGAAAGGTGTCACAACATAATGAAAGTTGCCCAAGCCAAACTGGAAATGATCAAACCTGAAGAAGTGAACTTGGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023580.8 ENSMUST00000239066.2 |