RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP24 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028514

Ensembl transcript IDs: ENSMUST00000094933.5, ENSMUST00000165709.8

Found 597 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGTACACGCCTTGGTGCTAGCAGGGAGGGTGGGGCGAGCCAGGTaGGTCTGGTGGCTCAGGCTCCGGGCCTTACAGCTCATAGCTGTA +
Preference number: 1 (lower is better)
Translates to: AVHALVLAGRVGRAR*VWWLRLRALQLIAV
Trigger: TACAGCTATGAGCTGTAAGGCCCGGAGCCTGAGCCACCAGACTCACCTGGCTCGCCCCACCCTCCCTGCTAGCACCAAGGCGTGTACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 90 bp GAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATaGTGTACACGCCTTGGTGCTAGCAGGGAGGGTGGGGCGAGCCAG +
Preference number: 1 (lower is better)
Translates to: EVAEENSSLLVPSLR*CTRLGASREGGASQ
Trigger: CTGGCTCGCCCCACCCTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR TCA 90 bp GCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACATCTACAGTaGGATGAAGAGTCCCTGAAACACACAGCAGGGACTGTGACCTGC +
Preference number: 1 (lower is better)
Translates to: ATEPTTEAGCTEHLQ*DEESLKHTAGTVTC
Trigger: GCAGGTCACAGTCCCTGCTGTGTGTTTCAGGGACTCTTCATCTCACTGTAGATGTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR TCA 90 bp GGAAGGATGCTCACTGCAGCAGCAAAGGAAGAAGATGGACCAACGTaGACAGTGTCGGCGACCCTGATTCAGCTTTATGTGAGGACAGCA +
Preference number: 1 (lower is better)
Translates to: GRMLTAAAKEEDGPT*TVSATLIQLYVRTA
Trigger: TGCTGTCCTCACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCCTTTGCTGCTGCAGTGAGCATCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 90 bp CTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACTaGAGCAGCAAAGGAAGAAGATGGACCAACGTGAACAGTGTCGGC +
Preference number: 1 (lower is better)
Translates to: LLEIKWFLMAWKDAH*SSKGRRWTNVNSVG
Trigger: GCCGACACTGTTCACGTTGGTCCATCTTCTTCCTTTGCTGCTGCAGTGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 90 bp CTGATGGCGTGGAAGGATGCTCACTGCAGCAGCAAAGGAAGAAGATaGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGT +
Preference number: 1 (lower is better)
Translates to: LMAWKDAHCSSKGRR*TNVNSVGDPDSALC
Trigger: ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCCTTTGCTGCTGCAGTGAGCATCCTTCCACGCCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 90 bp CCCTCACATTCAAAAACTGTAAGAACACCAGCATCCGACCAGCTCTaGCACTTGCCTGTCTGTTTCCCTGAGGACACAGCTCTGCTCTTA +
Preference number: 1 (lower is better)
Translates to: PSHSKTVRTPASDQL*HLPVCFPEDTALLL
Trigger: TAAGAGCAGAGCTGTGTCCTCAGGGAAACAGACAGGCAAGTGGCAGAGCTGGTCGGATGCTGGTGTTCTTACAGTTTTTGAATGTGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 90 bp GTTAGTGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTaGAAGGATGCTCACTGCAGCAGCAAAGGAAGAAGATGGACCAAC +
Preference number: 1 (lower is better)
Translates to: VSGLKLLEIKWFLMA*KDAHCSSKGRRWTN
Trigger: GTTGGTCCATCTTCTTCCTTTGCTGCTGCAGTGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 90 bp CCCACACAATCTTCCTATAAGCATGGGTGTGAAGAGGTGGTGGACTaGGAAGGGAGAAAATGGGATGGGTGTCCAGGTGTTCAAAATCAA +
Preference number: 1 (lower is better)
Translates to: PTQSSYKHGCEEVVD*EGRKWDGCPGVQNQ
Trigger: TTGATTTTGAACACCTGGACACCCATCCCATTTTCTCCCTTCCCAGTCCACCACCTCTTCACACCCATGCTTATAGGAAGATTGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 90 bp AAAAGTCCTCAGAAGGTTAGTGGACTGAAGCTGTTGGAAATCAAGTaGTTCCTGATGGCGTGGAAGGATGCTCACTGCAGCAGCAAAGGA +
Preference number: 1 (lower is better)
Translates to: KSPQKVSGLKLLEIK*FLMAWKDAHCSSKG
Trigger: TCCTTTGCTGCTGCAGTGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCACTAACCTTCTGAGGACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 90 bp CCAGATTTATTTTCTAAAATCATGTGTCAATGCACATGTAGACGCTaGGACAGCTGGTCCACATTGCAGAATTCTCCCAACAGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: PDLFSKIMCQCTCRR*DSWSTLQNSPNSSQ
Trigger: CTGGGAGCTGTTGGGAGAATTCTGCAATGTGGACCAGCTGTCCCAGCGTCTACATGTGCATTGACACATGATTTTAGAAAATAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 90 bp ATCACAAGTTTGCCACCAGATTTATTTTCTAAAATCATGTGTCAATaGACATGTAGACGCTGGGACAGCTGGTCCACATTGCAGAATTCT +
Preference number: 1 (lower is better)
Translates to: ITSLPPDLFSKIMCQ*TCRRWDSWSTLQNS
Trigger: AGAATTCTGCAATGTGGACCAGCTGTCCCAGCGTCTACATGTGCATTGACACATGATTTTAGAAAATAAATCTGGTGGCAAACTTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR TCA 90 bp TGTTTTAAATTCTATTTTGGGAACAACCCATCAGTCCTTACTGACTaGCGTCAGAGAACACACCTTACTCTTCTGGAGAACATAGCTTTT +
Preference number: 1 (lower is better)
Translates to: CFKFYFGNNPSVLTD*RQRTHLTLLENIAF
Trigger: AAAAGCTATGTTCTCCAGAAGAGTAAGGTGTGTTCTCTGACGTCAGTCAGTAAGGACTGATGGGTTGTTCCCAAAATAGAATTTAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 90 bp CTTTATTCCTCGTCCTCACTCTCCTATGTCCATGAATCACAAGTTTaGCACCAGATTTATTTTCTAAAATCATGTGTCAATGCACATGTA +
Preference number: 1 (lower is better)
Translates to: LYSSSSLSYVHESQV*HQIYFLKSCVNAHV
Trigger: TACATGTGCATTGACACATGATTTTAGAAAATAAATCTGGTGGCAAACTTGTGATTCATGGACATAGGAGAGTGAGGACGAGGAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGCTGAATTCGGGCTCCTaGGTGCAGTTGCTGGCAATG +
Preference number: 2 (lower is better)
Translates to: ELQELPVGGSSVCPGALGLNSGS*VQLLAM
Trigger: CATTGCCAGCAACTGCACTCAGGAGCCCGAATTCAG...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGAGGCCAGCGTTTCAATaGGGGTCCCACACAATCTTC +
Preference number: 2 (lower is better)
Translates to: ELQELPVGGSSVCPGALGRPAFQ*GSHTIF
Trigger: GAAGATTGTGTGGGACCCGCATTGAAACGCTGGCCT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGAAGGCACTTAGGGGCTaGCTGTGCCTCTTTGACTTG +
Preference number: 2 (lower is better)
Translates to: ELQELPVGGSSVCPGALGKALRG*LCLFDL
Trigger: CAAGTCAAAGAGGCACAGCCAGCCCCTAAGTGCCTT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTCAGTCCTTACTGACTaGCGTCAGAGAACACACCTT +
Preference number: 2 (lower is better)
Translates to: ELQELPVGGSSVCPGALGSVLTD*RQRTHL
Trigger: AAGGTGTGTTCTCTGACGTCAGTCAGTAAGGACTGA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGACAGCTGGTCCACATTaGAGAATTCTCCCAACAGCT +
Preference number: 2 (lower is better)
Translates to: ELQELPVGGSSVCPGALGTAGPH*RILPTA
Trigger: AGCTGTTGGGAGAATTCTGCAATGTGGACCAGCTGT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGCCCCAGTTCTGTGCATaGCAAGTGGAAAATAAGGCA +
Preference number: 2 (lower is better)
Translates to: ELQELPVGGSSVCPGALGPQFCA*QVENKA
Trigger: TGCCTTATTTTCCACTTGCCATGCACAGAACTGGGG...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGAGAAGTCTCTCCTCTaGAGCACGCGGTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LRGWLCLFDLANLADSGSEKSLL*STRFSS
Trigger: GGAGGAGAACCGCGTGCTCCAGAGGAGAGACTTCTC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTACACAGCAGGGACTGTaGCCTGCCTGCCGAATGTCC +
Preference number: 2 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCTQQGL*PACRMS
Trigger: GGACATTCGGCAGGCAGGTCACAGTCCCTGCTGTGT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGAATACACAATCAACATaGGGGCCACAGAAATTATGT +
Preference number: 2 (lower is better)
Translates to: ELQELPVGGSSVCPGALGNTQST*GPQKLC
Trigger: ACATAATTTCTGTGGCCCTCATGTTGATTGTGTATT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR GCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAGCAGGGACTGTGACCTaGCTGCCGAATGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSAGTVT*LPNVLT
Trigger: TGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGC...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTGAGAAGTCTCTCCTCTaGAGCACGCGGTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCEKSLL*STRFSS
Trigger: GGAGGAGAACCGCGTGCTCCAGAGGAGAGACTTCTC...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACTGAATTCGGGCTCCTaGGTGCAGTTGCTGGCAATG +
Preference number: 2 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSLNSGS*VQLLAM
Trigger: CATTGCCAGCAACTGCACTCAGGAGCCCGAATTCAG...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGAGCAAAGCAAATGATTaGAGATCACATGACTTAAGA +
Preference number: 2 (lower is better)
Translates to: ELQELPVGGSSVCPGALGSKAND*RSHDLR
Trigger: TCTTAAGTCATGTGATCTGCAATCATTTGCTTTGCT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATTTCCCAAAAGGTGCTaGGCATCCTGTCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSFPKRC*ASCLGT
Trigger: TGTGCCCAGACAGGATGCTCAGCACCTTTTGGGAAA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGCAATGCCACAGTCTCTaGTGCTGGAAGCATGTCATC +
Preference number: 2 (lower is better)
Translates to: SLLVPSLRCCTRLGASREQCHSL*CWKHVI
Trigger: GATGACATGCTTCCAGCATCAGAGACTGTGGCATTG...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR GCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGCTTAGGGGCTGGCTGTaGCTCTTTGACTTGGCAAAT +
Preference number: 2 (lower is better)
Translates to: SLLVPSLRCCTRLGASRELRGWL*LFDLAN
Trigger: ATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATTCTCCTCCCACTCCTaGCTCCCACTCAAGGCTTAT +
Preference number: 2 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSFSSHS*LPLKAY
Trigger: ATAAGCCTTGAGTGGGAGCCAGGAGTGGGAGGAGAA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CAA 90 bp CATTCAAAAACTGTAAGAACACCAGCATCCGACCAGCTCTGCCACTaGCCTGTCTGTTTCCCTGAGGACACAGCTCTGCTCTTACATGCT +
Preference number: 2 (lower is better)
Translates to: HSKTVRTPASDQLCH*PVCFPEDTALLLHA
Trigger: AGCATGTAAGAGCAGAGCTGTGTCCTCAGGGAAACAGACAGGCAAGTGGCAGAGCTGGTCGGATGCTGGTGTTCTTACAGTTTTTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACATGTCATCAAGGTCTaGGACCATGCTGAGGGCTTT +
Preference number: 2 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSHVIKV*DHAEGF
Trigger: AAAGCCCTCAGCATGGTCTCAGACCTTGATGACATG...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACAAAGAACACAGGGAATaGCTATGTAAGCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNKEHRE*LCKPSL
Trigger: GAGGCTGGGCTTACATAGCCATTCCCTGTGTTCTTT...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGCCCCAGTTCTGTGCATaGCAAGTGGAAAATAAGGCA +
Preference number: 2 (lower is better)
Translates to: SLLVPSLRCCTRLGASREPQFCA*QVENKA
Trigger: TGCCTTATTTTCCACTTGCCATGCACAGAACTGGGG...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTTGGGAAGGGAGAAAATaGGATGGGTGTCCAGGTGTT +
Preference number: 2 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCWEGRK*DGCPGV
Trigger: AACACCTGGACACCCATCCCATTTTCTCCCTTCCCA...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGAGGGAGAAAATGGGATaGGTGTCCAGGTGTTCAAAA +
Preference number: 2 (lower is better)
Translates to: SLLVPSLRCCTRLGASREREKMG*VSRCSK
Trigger: TTTTGAACACCTGGACACCCATCCCATTTTCTCCCT...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAACATCTACAGTGAGATaGAGAGTCCCTGAAACACAC +
Preference number: 2 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSTSTVR*RVPETH
Trigger: GTGTGTTTCAGGGACTCTTCATCTCACTGTAGATGT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACAGCAGCTCCCAGCCTTaGTATTTAACTCAATACACA +
Preference number: 2 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNSSSQP*YLTQYT
Trigger: TGTGTATTGAGTTAAATACCAAGGCTGGGAGCTGCT...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAAGCAAAGGAAGAAGATaGACCAACGTGAACAGTGTC +
Preference number: 2 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSSKGRR*TNVNSV
Trigger: GACACTGTTCACGTTGGTCCATCTTCTTCCTTTGCT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTAGCAGCTCCCAGCCTTaGTATTTAACTCAATACACA +
Preference number: 2 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCSSSQP*YLTQYT
Trigger: TGTGTATTGAGTTAAATACCAAGGCTGGGAGCTGCT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAAAAGTAAAATTCTGCTaGATCTCACAGAGTAGCAGC +
Preference number: 2 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSKVKFC*ISQSSS
Trigger: GCTGCTACTCTGTGAGATTCAGCAGAATTTTACTTT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR GCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACAGCTGGTCCACATTaGAGAATTCTCCCAACAGCT +
Preference number: 2 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYTAGPH*RILPTA
Trigger: AGCTGTTGGGAGAATTCTGCAATGTGGACCAGCTGT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACAAAGAACACAGGGAATaGCTATGTAAGCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYKEHRE*LCKPSL
Trigger: GAGGCTGGGCTTACATAGCCATTCCCTGTGTTCTTT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTCAGTCCTTACTGACTaGCGTCAGAGAACACACCTT +
Preference number: 2 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSSVLTD*RQRTHL
Trigger: AAGGTGTGTTCTCTGACGTCAGTCAGTAAGGACTGA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACATCTACAGTGAGATaGAGAGTCCCTGAAACACAC +
Preference number: 2 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYTSTVR*RVPETH
Trigger: GTGTGTTTCAGGGACTCTTCATCTCACTGTAGATGT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR GCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAAGCAAAGCAAATGATTaGAGATCACATGACTTAAGA +
Preference number: 2 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSSKAND*RSHDLR
Trigger: TCTTAAGTCATGTGATCTGCAATCATTTGCTTTGCT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACAATACACAATCAACATaGGGGCCACAGAAATTATGT +
Preference number: 2 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYNTQST*GPQKLC
Trigger: ACATAATTTCTGTGGCCCTCATGTTGATTGTGTATT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CAA 90 bp GAATGGCTATGTAAGCCCAGCCTCAAACGAATGAGAGATGTCATGTaGGCAAATACAACTACATGGATGGCATTTAATTATTTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: EWLCKPSLKRMRDVM*ANTTTWMAFNYFLV
Trigger: AACTAGAAAATAATTAAATGCCATCCATGTAGTTGTATTTGCCAACATGACATCTCTCATTCGTTTGAGGCTGGGCTTACATAGCCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR TCA 72 bp GCCTTGGTGCTAGCAGGGAGGGTGGGGCGAGCCAGGTaGGTCTGGTGGCTCAGGCTCCGGGCCTTACAGCTC +
Preference number: 3 (lower is better)
Translates to: ALVLAGRVGRAR*VWWLRLRALQL
Trigger: GAGCTGTAAGGCCCGGAGCCTGAGCCACCAGACTCACCTGGCTCGCCCCACCCTCCCTGCTAGCACCAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 72 bp TCTCTCCTCTGGAGCACGCGGTTCTCCTCCCACTCCTaGCTCCCACTCAAGGCTTATTTAAGGCCTTCAATG +
Preference number: 3 (lower is better)
Translates to: SLLWSTRFSSHS*LPLKAYLRPSM
Trigger: CATTGAAGGCCTTAAATAAGCCTTGAGTGGGAGCCAGGAGTGGGAGGAGAACCGCGTGCTCCAGAGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTTGCTCTTGTCAATCTaGAATCAGAAAACCCCTCAA +
Preference number: 3 (lower is better)
Translates to: ELQELPVGGSSVCPGALGLLLSI*NQKTPQ
Trigger: TTGAGGGGTTTTCTGATTCAAGATTGACAAGAGCAA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGATGAGAGATGTCATGTaGGCAAATACAACTACATGG +
Preference number: 3 (lower is better)
Translates to: ELQELPVGGSSVCPGALGMRDVM*ANTTTW
Trigger: CCATGTAGTTGTATTTGCCAACATGACATCTCTCAT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGACCAGCTCTGCCACTaGCCTGTCTGTTTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: SLLVPSLRCCTRLGASREDQLCH*PVCFPE
Trigger: CTCAGGGAAACAGACAGGCAAGTGGCAGAGCTGGTC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGACAGCTGGTCCACATaGCAGAATTCTCCCAACAGC +
Preference number: 3 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQDSWST*QNSPNS
Trigger: GCTGTTGGGAGAATTCTGCAATGTGGACCAGCTGTC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 72 bp GAAGAGTCCCTGAAACACACAGCAGGGACTGTGACCTaGCTGCCGAATGTCCTCACAATGCAAAAGCAACCA +
Preference number: 3 (lower is better)
Translates to: EESLKHTAGTVT*LPNVLTMQKQP
Trigger: TGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCTGTGTGTTTCAGGGACTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 72 bp GAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATaGTGTACACGCCTTGGTGCTAGCAGGGAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: EENSSLLVPSLR*CTRLGASREGG
Trigger: CCCACCCTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 72 bp TGGAAGGATGCTCACTGCAGCAGCAAAGGAAGAAGATaGACCAACGTGAACAGTGTCGGCGACCCTGATTCA +
Preference number: 3 (lower is better)
Translates to: WKDAHCSSKGRR*TNVNSVGDPDS
Trigger: TGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCCTTTGCTGCTGCAGTGAGCATCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGACAGCTGGTCCACATaGCAGAATTCTCCCAACAGC +
Preference number: 3 (lower is better)
Translates to: SLLVPSLRCCTRLGASREDSWST*QNSPNS
Trigger: GCTGTTGGGAGAATTCTGCAATGTGGACCAGCTGTC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR TCA 72 bp CCCACAACTGAAGCTGGTTGCACGGAACATCTACAGTaGGATGAAGAGTCCCTGAAACACACAGCAGGGACT +
Preference number: 3 (lower is better)
Translates to: PTTEAGCTEHLQ*DEESLKHTAGT
Trigger: AGTCCCTGCTGTGTGTTTCAGGGACTCTTCATCTCACTGTAGATGTTCCGTGCAACCAGCTTCAGTTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 72 bp TCAAAAACTGTAAGAACACCAGCATCCGACCAGCTCTaGCACTTGCCTGTCTGTTTCCCTGAGGACACAGCT +
Preference number: 3 (lower is better)
Translates to: SKTVRTPASDQL*HLPVCFPEDTA
Trigger: AGCTGTGTCCTCAGGGAAACAGACAGGCAAGTGGCAGAGCTGGTCGGATGCTGGTGTTCTTACAGTTTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 72 bp ATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACTaGAGCAGCAAAGGAAGAAGATGGACCAACGTGAAC +
Preference number: 3 (lower is better)
Translates to: IKWFLMAWKDAH*SSKGRRWTNVN
Trigger: GTTCACGTTGGTCCATCTTCTTCCTTTGCTGCTGCAGTGAGCATCCTTCCACGCCATCAGGAACCACTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 72 bp TGCTGTCCTGACCATCTTTGTGAGTCAGGCCAAAGCTaGCTTTGGTCTGTGTTAGGCTACAGAACCCACAAC +
Preference number: 3 (lower is better)
Translates to: CCPDHLCESGQS*LWSVLGYRTHN
Trigger: GTTGTGGGTTCTGTAGCCTAACACAGACCAAAGCCAGCTTTGGCCTGACTCACAAAGATGGTCAGGACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 72 bp TCTTCCTATAAGCATGGGTGTGAAGAGGTGGTGGACTaGGAAGGGAGAAAATGGGATGGGTGTCCAGGTGTT +
Preference number: 3 (lower is better)
Translates to: SSYKHGCEEVVD*EGRKWDGCPGV
Trigger: AACACCTGGACACCCATCCCATTTTCTCCCTTCCCAGTCCACCACCTCTTCACACCCATGCTTATAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 72 bp CCACACAATCTTCCTATAAGCATGGGTGTGAAGAGGTaGTGGACTGGGAAGGGAGAAAATGGGATGGGTGTC +
Preference number: 3 (lower is better)
Translates to: PHNLPISMGVKR*WTGKGENGMGV
Trigger: GACACCCATCCCATTTTCTCCCTTCCCAGTCCACCACCTCTTCACACCCATGCTTATAGGAAGATTGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 72 bp CAGAAGGTTAGTGGACTGAAGCTGTTGGAAATCAAGTaGTTCCTGATGGCGTGGAAGGATGCTCACTGCAGC +
Preference number: 3 (lower is better)
Translates to: QKVSGLKLLEIK*FLMAWKDAHCS
Trigger: GCTGCAGTGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCACTAACCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGCTGTGCCTCTTTGACTaGGCAAATCTAGCTGACAGT +
Preference number: 3 (lower is better)
Translates to: SLLVPSLRCCTRLGASRELCLFD*ANLADS
Trigger: ACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAG...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 72 bp CTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTaGAAGGATGCTCACTGCAGCAGCAAAGGAAGAAGA +
Preference number: 3 (lower is better)
Translates to: LKLLEIKWFLMA*KDAHCSSKGRR
Trigger: TCTTCTTCCTTTGCTGCTGCAGTGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTCTGTGCCTCTTTGACTaGGCAAATCTAGCTGACAGT +
Preference number: 3 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCLCLFD*ANLADS
Trigger: ACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAG...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGATGAGAGATGTCATGTaGGCAAATACAACTACATGG +
Preference number: 3 (lower is better)
Translates to: SLLVPSLRCCTRLGASREMRDVM*ANTTTW
Trigger: CCATGTAGTTGTATTTGCCAACATGACATCTCTCAT...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGATAGCATTGAGTCAATaGTGCAATTCCTGCTTGATT +
Preference number: 3 (lower is better)
Translates to: SLLVPSLRCCTRLGASREIALSQ*CNSCLI
Trigger: AATCAAGCAGGAATTGCACAATTGACTCAATGCTAT...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CCA 72 bp TTTTCTAAAATCATGTGTCAATGCACATGTAGACGCTaGGACAGCTGGTCCACATTGCAGAATTCTCCCAAC +
Preference number: 3 (lower is better)
Translates to: FSKIMCQCTCRR*DSWSTLQNSPN
Trigger: GTTGGGAGAATTCTGCAATGTGGACCAGCTGTCCCAGCGTCTACATGTGCATTGACACATGATTTTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTTGCTCTTGTCAATCTaGAATCAGAAAACCCCTCAA +
Preference number: 3 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSLLLSI*NQKTPQ
Trigger: TTGAGGGGTTTTCTGATTCAAGATTGACAAGAGCAA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR-3UTR CAA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCGTTTTAAATTCTATTTaGGGAACAACCCATCAGTCC +
Preference number: 3 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSVLNSI*GTTHQS
Trigger: GGACTGATGGGTTGTTCCCAAAATAGAATTTAAAAC...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 72 bp TCGTCCTCACTCTCCTATGTCCATGAATCACAAGTTTaGCACCAGATTTATTTTCTAAAATCATGTGTCAAT +
Preference number: 3 (lower is better)
Translates to: SSSLSYVHESQV*HQIYFLKSCVN
Trigger: ATTGACACATGATTTTAGAAAATAAATCTGGTGGCAAACTTGTGATTCATGGACATAGGAGAGTGAGGACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR GCA 72 bp TTGGCAGTAAAAATGACAATTCTTTCAAGGCAGGCCTaGCATAATTGTCACTTTGTGGTACTACATTTAAAA +
Preference number: 3 (lower is better)
Translates to: LAVKMTILSRQA*HNCHFVVLHLK
Trigger: TTTTAAATGTAGTACCACAAAGTGACAATTATGGCAGGCCTGCCTTGAAAGAATTGTCATTTTTACTGCCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGCCCCACTGCTGCTGCTaGTGGAGCTGGTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGPHCCC*WSWWRN
Trigger: ATTCCTCCACCAGCTCCAGCAGCAGCAGCAGTGGGG...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGCGGGCCGCTCGTTGGTaGGCAGCGCCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRRAARW*AAPRPR
Trigger: ACGAGGCCGTGGCGCTGCTCACCAACGAGCGGCCCG...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGAAAGACGCCAGTTGCTaGCTCCGAAGCTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGKDASC*LRSCRH
Trigger: GTGCCTGCAGCTTCGGAGTCAGCAACTGGCGTCTTT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGAGCAGCGTGGTCATGTaGTGCTCCTCCTCCGATTCC +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGSSVVM*CSSSDS
Trigger: GGAATCGGAGGAGGAGCAGCACATGACCACGCTGCT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTGGCCTGCATGGGCCTaGCCACTGTGCACAATGACA +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGWPAWA*PLCTMT
Trigger: TGTCATTGTGCACAGTGGGCAGGCCCATGCAGGCCA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGGGGCCTTGCGGATGGTaGCCGGGTCCGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRGPCGW*PGPRSP
Trigger: TGGGCTTCTCGGACCCGGCCACCATCCGCAAGGCCC...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTGCTGCTGGAGCTGGTaGAGGAATCTGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGCCWSW*RNLQSS
Trigger: GGAGCTCTGCAGATTCCTCCACCAGCTCCAGCAGCA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGGCTTCTACTTCCTCATaGAGGGGCAGCAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGASTSS*RGSRGL
Trigger: CAGCCCTCTGCTGCCCCTCCATGAGGAAGTAGAAGC...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGGCGCCACGGCCTCGTTaGTGTCGTTCTTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRAPRPR*CRSWPG
Trigger: GCCTGGCCAAGAACGACATCAACGAGGCCGTGGCGC...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGGCATGGCAGTTGCAGTaGGCATTTTGGTTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGAWQLQ*AFWLLG
Trigger: CCCGAGCAACCAAAATGCTCACTGCAACTGCCATGC...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGGGCCGAGGAGAGGACTaGGGTGAAATCTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGGRGED*GEISGE
Trigger: TTCACCTGAGATTTCACCTCAGTCCTCTCCTCGGCC...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAACCAGGCGCAGGGCCTTaGGGATGGTGGCCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKPGAGP*GWWPGP
Trigger: CGGACCCGGCCACCATCCGCAAGGCCCTGCGCCTGG...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTCTCATTGGCAGGACTaGTCTCGGACCCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGSHWQD*SRTHCC
Trigger: GCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTTCTTCTGTAACCACTaGACAGCCCAGCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGFFCNH*TAQLQW
Trigger: CCACTGGAGCTGGGCTGTGCAGTGGTTACAGAAGAA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGCAAGGGCTTCCTGAATaGCTGGGTCAGTGGGTATCA +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGQGLPE*LGQWVS
Trigger: TGATACCCACTGACCCAGCCATTCAGGAAGCCCTTG...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTCAGAATCTTCTCCTTaGAGAGCTGCTGCTGGACGT +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGSESSP*RAAAGR
Trigger: ACGTCCAGCAGCAGCTCTTCAAGGAGAAGATTCTGA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGAGGCCCCACTGCTGCTaGTGCTGGAGCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQRPHCC*CWSWWR
Trigger: CCTCCACCAGCTCCAGCAGCAGCAGCAGTGGGGCCT...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTTGACGCGCTCTACCTaGATGGGATCTTCAATGACC +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGLTRST*MGSSMT
Trigger: GGTCATTGAAGATCCCATCCAGGTAGAGCGCGTCAA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGGCCCAGCTCCAGTGGTaGGAGTTCTCTTTGAAGTAT +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGAQLQW*EFSLKY
Trigger: ATACTTCAAAGAGAACTCCCACCACTGGAGCTGGGC...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAGCGCCACGGCCTCGTTaGTGTCGTTCTTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKAPRPR*CRSWPG
Trigger: GCCTGGCCAAGAACGACATCAACGAGGCCGTGGCGC...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCTGCTCGTCTGCCGGCTaGCATTTCGGAATGGACGGG +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSCSSAG*HFGMDG
Trigger: CCCGTCCATTCCGAAATGTCAGCCGGCAGACGAGCA...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGAAAGTCCTGCTGACTaGTGGCGGCACTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSESPAD*WRHCWL
Trigger: CAGCCAGCAGTGCCGCCATCAGTCAGCAGGACTTTC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGGAAGGTCTCCAGCCCTaGTACCTTGCTTTTGTACAA +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGEGLQP*YLAFVQ
Trigger: TTGTACAAAAGCAAGGTATCAGGGCTGGAGACCTTC...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAAGGCCCCACTGCTGCTaGTGCTGGAGCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKRPHCC*CWSWWR
Trigger: CCTCCACCAGCTCCAGCAGCAGCAGCAGTGGGGCCT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGAGATCCTCAGCCTCCTaGCTTACGACGCTCACTCGG +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRRSSAS*LTTLTR
Trigger: CCGAGTGAGCGTCGTAAGGCAGGAGGCTGAGGATCT...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGCCATGCACAGCAGCGTaGTCATGTGCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRPCTAA*SCAAPP
Trigger: AGGAGGAGCAGCACATGACCACGCTGCTGTGCATGG...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAGGGCCTTGCGGATGGTaGCCGGGTCCGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSGPCGW*PGPRSP
Trigger: TGGGCTTCTCGGACCCGGCCACCATCCGCAAGGCCC...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGCCGCCGCTATCCATaGGCTCGTAGCCACCGTAGT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQGRRYP*ARSHRS
Trigger: ACTACGGTGGCTACGAGCCCATGGATAGCGGCGGCC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTCAGAAGATGAATCCTaGCGAGCCATTCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGSEDES*RAIPAT
Trigger: AGTTGCAGGAATGGCTCGCCAGGATTCATCTTCTGA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCGGGCCGCTCGTTGGTaGGCAGCGCCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSRAARW*AAPRPR
Trigger: ACGAGGCCGTGGCGCTGCTCACCAACGAGCGGCCCG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGCACCACAGAGGAGTTaGGGTACTCTGCACACACCC +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSAPQRS*GTLHTP
Trigger: GGGTGTGTGCAGAGTACCTCAACTCCTCTGTGGTGC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCAAAGACGCCAGTTGCTaGCTCCGAAGCTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSKDASC*LRSCRH
Trigger: GTGCCTGCAGCTTCGGAGTCAGCAACTGGCGTCTTT...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAGCTGGTGGAGGAATCTaGAGAGCTCCCCGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKAGGGI*RAPRGG
Trigger: ACCCCCTCGGGGAGCTCTGCAGATTCCTCCACCAGC...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGCCCAGCATGCAGGGCTaGTGGCTCTCCTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQPSMQG*WLSFTA
Trigger: AGCAGTGAAGGAGAGCCAGCAGCCCTGCATGCTGGG...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGATGACCAGGACCTCATaGAGTAGCTGGAATGTATTC +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGMTRTS*SSWNVF
Trigger: GAATACATTCCAGCTACTGCATGAGGTCCTGGTCAT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGCTTCTACTTCCTCATaGAGGGGCAGCAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSASTSS*RGSRGL
Trigger: CAGCCCTCTGCTGCCCCTCCATGAGGAAGTAGAAGC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTGTCCTGAGCTGAGATaGTTCGCTGAAAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGCPELR*FAERFF
Trigger: GAAAAACCTTTCAGCGAACCATCTCAGCTCAGGACA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGCACCACAGAGGAGTTaGGGTACTCTGCACACACCC +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQAPQRS*GTLHTP
Trigger: GGGTGTGTGCAGAGTACCTCAACTCCTCTGTGGTGC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTCCTCCAAGGCCTGCTaGATGAGGCTGCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNSSKAC*MRLLGK
Trigger: CTTGCCCAGCAGCCTCATTCAGCAGGCCTTGGAGGA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATGGCGTAGGACGAACTaGAGGCCCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSWRRTN*RPHCCC
Trigger: GCAGCAGCAGTGGGGCCTTCAGTTCGTCCTACGCCA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGCTATGCCATCTTTGGTaGGGTCTTCATCTAATGATG +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGLCHLW*GLHLMM
Trigger: CATCATTAGATGAAGACCTCACCAAAGATGGCATAG...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACGAAAGTCCTGCTGACTaGTGGCGGCACTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNESPAD*WRHCWL
Trigger: CAGCCAGCAGTGCCGCCATCAGTCAGCAGGACTTTC...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGCCCCAAGGAGGAAGCTaGTCATGTGTCGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQPQGGS*SCVAVL
Trigger: CAGCACTGCGACACATGATCAGCTTCCTCCTTGGGG...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACAGCTCGCAGACGTCCTaGCCAGTCACAAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNSSQTS*PVTRHS
Trigger: GGAGTGCCTTGTGACTGGCCAGGACGTCTGCGAGCT...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCAGCATGCAGGGCTGCTaGCTCTCCTTCACTGCTAGA +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSSMQGC*LSFTAR
Trigger: TCTAGCAGTGAAGGAGAGCCAGCAGCCCTGCATGCT...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGAGGTCTTCTCCAGAATaGTGGCCACAGCGACTCGTA +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRRSSPE*WPQRLV
Trigger: TACGAGTCGCTGTGGCCACCATTCTGGAGAAGACCT...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CAA 72 bp ACTGTAAGAACACCAGCATCCGACCAGCTCTGCCACTaGCCTGTCTGTTTCCCTGAGGACACAGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TVRTPASDQLCH*PVCFPEDTALL
Trigger: GAGCAGAGCTGTGTCCTCAGGGAAACAGACAGGCAAGTGGCAGAGCTGGTCGGATGCTGGTGTTCTTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTTCCTCCAAGGCCTGCTaGATGAGGCTGCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCSSKAC*MRLLGK
Trigger: CTTGCCCAGCAGCCTCATTCAGCAGGCCTTGGAGGA...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAATGGTCAAGGGCTTCCTaGATGGCTGGGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKWSRAS*MAGSVG
Trigger: ACCCACTGACCCAGCCATTCAGGAAGCCCTTGACCA...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACAGCCCCACAAACCCTaGGCTGGACCTGCTATCCAC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSQPHKP*AGPAIH
Trigger: GTGGATAGCAGGTCCAGCTCAGGGTTTGTGGGGCTG...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGCCTTGTTCCACATCTTaGAGATCTTCCAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGPCSTS*RSSRNS
Trigger: AGAATTTCTGGAAGATCTTCAAGATGTGGAACAAGG...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACCAGGAGGGAGCCAGTaGGCTCTCGCAGAGCAAACA +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSPGGSQ*ALAEQT
Trigger: TGTTTGCTCTGCGAGAGCTCACTGGCTCCCTCCTGG...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGGCAGCAGGGCACTTTTaGGCAAGAGTGACAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRAAGHF*ARVTRN
Trigger: GTTTCTTGTCACTCTTGCTCAAAAGTGCCCTGCTGC...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACCCCACTGCTGCTGCTaGTGGAGCTGGTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSPHCCC*WSWWRN
Trigger: ATTCCTCCACCAGCTCCAGCAGCAGCAGCAGTGGGG...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGGGCAGTGAAATCACTTaGTTCCATAGTTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGGSEIT*FHSLYC
Trigger: GCAATACAAACTATGGAAGCAAGTGATTTCACTGCC...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACCCAGCATGCAGGGCTaGTGGCTCTCCTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSPSMQG*WLSFTA
Trigger: AGCAGTGAAGGAGAGCCAGCAGCCCTGCATGCTGGG...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAATCCGGAAGCCCGGGCTaGATATACAGCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKSGSPG*IYSCWK
Trigger: CTTCCAGCAGCTGTATATGCAGCCCGGGCTTCCGGA...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGTGGGCCTGCCCACTGTaGACAATGACACCAACAAGC +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQWACPL*TMTPTS
Trigger: GCTTGTTGGTGTCATTGTGCACAGTGGGCAGGCCCA...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGTCACCAGAGCCGGTTaGAAGCGCATGCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQVTRAG*KRMQSN
Trigger: GTTGCTTTGCATGCGCTTCCAACCGGCTCTGGTGAC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGCAGCATGTGTTAGAGTaGGGCCACCGAGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQQHVLE*GHRVLN
Trigger: GTTCAGCACTCGGTGGCCCCACTCTAACACATGCTG...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTGCTGCTGGAGCTGGTaGAGGAATCTGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNCCWSW*RNLQSS
Trigger: GGAGCTCTGCAGATTCCTCCACCAGCTCCAGCAGCA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACCACAAACCCTGAGCTaGACCTGCTATCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSPQTLS*TCYPPG
Trigger: CCCCGGTGGATAGCAGGTCCAGCTCAGGGTTTGTGG...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGTCTTCTCCAGAATGGTaGCCACAGCGACTCGTACTT +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRSSPEW*PQRLVL
Trigger: AAGTACGAGTCGCTGTGGCCACCATTCTGGAGAAGA...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGGCCCAGCTCCAGTGGTaGGAGTTCTCTTTGAAGTAT +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRAQLQW*EFSLKY
Trigger: ATACTTCAAAGAGAACTCCCACCACTGGAGCTGGGC...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGCTCTCCGTTCTCATTaGCAGGACTGCTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREALRSH*QDCSRT
Trigger: GGTCCGAGAGCAGTCCTGCCAATGAGAACGGAGAGC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTCGCACTGAAGTGTGGTaGCTTGAGCATGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCRTEVW*LEHAQQ
Trigger: CTGCTGCGCATGCTCAAGTCACCACACTTCAGTGCG...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTTTTTCTTCAGGTCTTaGATAATGCTCTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGFFFRS*IMLLSC
Trigger: GCAAGACAAGAGCATTATTCAAGACCTGAAGAAAAA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGCATCAGCCGTGGGCATaGGTTTGGAGCTTAGGACTT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQHQPWA*VWSLGL
Trigger: AAGTCCTAAGCTCCAAACTCATGCCCACGGCTGATG...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGGCCGAGGAGAGGACTaGGGTGAAATCTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREGRGED*GEISGE
Trigger: TTCACCTGAGATTTCACCTCAGTCCTCTCCTCGGCC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAACTCCCGTGCTTGTGCTaGACTCCATCTGCGTATCTG +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKLPCLC*TPSAYL
Trigger: CAGATACGCAGATGGAGTTCAGCACAAGCACGGGAG...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAAGCAGCGTGGTCATGTaGTGCTCCTCCTCCGATTCC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSSSVVM*CSSSDS
Trigger: GGAATCGGAGGAGGAGCAGCACATGACCACGCTGCT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTGGTCCGAGAAGCCCATaGACAGCAGCGTGGTCATGT +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCGPRSP*TAAWSC
Trigger: ACATGACCACGCTGCTGTGCATGGGCTTCTCGGACC...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGCTCTCCAAACACCTCTaGCCAGTTCCTCTGAGACAC +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRLSKHL*PVPLRH
Trigger: GTGTCTCAGAGGAACTGGGCAGAGGTGTTTGGAGAG...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTCCTTGAAGAGCTGCTaGTGGACGTCACTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNSLKSC*WTSLSR
Trigger: CCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCCTCACAGAAGGACTTTaGGCAGCTTCTTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSLTEGL*AASCHV
Trigger: GACATGGCAAGAAGCTGCGCAAAGTCCTTCTGTGAG...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACGGAATAGTAATGGCCTaGATGGGCCTGCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNGIVMA*MGLPTV
Trigger: CACAGTGGGCAGGCCCATGCAGGCCATTACTATTCC...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTAGATCCTCAGCCTCCTaGCTTACGACGCTCACTCGG +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCRSSAS*LTTLTR
Trigger: CCGAGTGAGCGTCGTAAGGCAGGAGGCTGAGGATCT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGTCTCATTGGCAGGACTaGTCTCGGACCCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASRESHWQD*SRTHCC
Trigger: GCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGA...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTCCATGCACAGCAGCGTaGTCATGTGCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCPCTAA*SCAAPP
Trigger: AGGAGGAGCAGCACATGACCACGCTGCTGTGCATGG...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACGTCACCAGAGCCGGTTaGAAGCGCATGCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNVTRAG*KRMQSN
Trigger: GTTGCTTTGCATGCGCTTCCAACCGGCTCTGGTGAC...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACCAGCATGTGTTAGAGTaGGGCCACCGAGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNQHVLE*GHRVLN
Trigger: GTTCAGCACTCGGTGGCCCCACTCTAACACATGCTG...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGACCTCATGCAGTAGCTaGAATGTATTCTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: ELQELPVGGSSVCPGALGTSCSS*NVFFNS
Trigger: TGAGTTAAAGAATACATTCCAGCTACTGCATGAGGT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
3UTR CAA 72 bp AAAAAGGCACTTAGGGGCTGGCTGTGCCTCTTTGACTaGGCAAATCTAGCTGACAGTGGCAGCCTGGCACTT +
Preference number: 4 (lower is better)
Translates to: KKALRGWLCLFD*ANLADSGSLAL
Trigger: AAGTGCCAGGCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAGTGCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAGCATGGCAGTTGCAGTaGGCATTTTGGTTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSAWQLQ*AFWLLG
Trigger: CCCGAGCAACCAAAATGCTCACTGCAACTGCCATGC...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGATCGTCTCATTACTGTaGGCCTCTACAGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRIVSLL*ASTVKV
Trigger: TACCTTCACTGTAGAGGCTCACAGTAATGAGACGAT...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGAGCACTCTGAAGGTTaGCATGCCAGGAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQEHSEG*HARSKR
Trigger: TCTTTTGCTCCTGGCATGTCAACCTTCAGAGTGCTC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAATGCAGCTGCAGCCCATaGCAGTCTCATGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKCSCSP*QSHETS
Trigger: GCTTGTTTCATGAGACTGTCATGGGCTGCAGCTGCA...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTGCAATTGCTTCCTaGGCTGCTGAGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRAAIAS*AAESTS
Trigger: AGAAGTAGACTCAGCAGCTCAGGAAGCAATTGCAGC...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGCTGCAATTGCTTCCTaGGCTGCTGAGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQAAIAS*AAESTS
Trigger: AGAAGTAGACTCAGCAGCTCAGGAAGCAATTGCAGC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGAATCAAACTCCTTGGTaGGAGCAGGGTCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRNQTPW*EQGQAD
Trigger: ATCAGCCTGACCCTGCTCTCACCAAGGAGTTTGATT...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCACACCACCATCTCCATaGGCGCCAGGAGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSTPPSP*APGGSQ
Trigger: CTGGCTCCCTCCTGGCGCTCATGGAGATGGTGGTGT...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCGCTGGTGGAGGAATCTaGAGAGCTCCCCGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSAGGGI*RAPRGG
Trigger: ACCCCCTCGGGGAGCTCTGCAGATTCCTCCACCAGC...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGCTCACAGAAGGACTTTaGGCAGCTTCTTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRLTEGL*AASCHV
Trigger: GACATGGCAAGAAGCTGCGCAAAGTCCTTCTGTGAG...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAACTGGCGAGCCATTCCTaGAACTGTGTAAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKLASHS*NCVRLH
Trigger: ATGGAGCCTTACACAGTTGCAGGAATGGCTCGCCAG...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGTCTCGGACCCATTGCTaGTTCCTGATTGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRSRTHC*FLIALF
Trigger: AAAAAGAGCAATCAGGAAGCAGCAATGGGTCCGAGA...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAGTCTGGCTAAGTAGGTaGAAGCCAGCAGGCATTTGC +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKVWLSR*KPAGIC
Trigger: GCAAATGCCTGCTGGCTTCCACCTACTTAGCCAGAC...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGTTGAAGAGCTGCTGCTaGACGTCACTCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASRELKSCC*TSLSRS
Trigger: TGACCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAA...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGCTGACATTTCGGAATaGACGGGAAGAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSADISE*TGRKCF
Trigger: GAAGCACTTTCTTCCCGTCCATTCCGAAATGTCAGC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGGCGGCACTGCTGGCTaGAGAATGACTATTTACAAT +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSGGTAG*RMTIYN
Trigger: ATTGTAAATAGTCATTCTCCAGCCAGCAGTGCCGCC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAAGGTCTTCTCCAGAATaGTGGCCACAGCGACTCGTA +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKRSSPE*WPQRLV
Trigger: TACGAGTCGCTGTGGCCACCATTCTGGAGAAGACCT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTCCAGCCTCTTGTCTTTaGGGTCCTTCTCCTCTACAC +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCPASCL*GPSPLH
Trigger: GTGTAGAGGAGAAGGACCTCAAAGACAAGAGGCTGG...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094933.5
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTGGCGTAGGACGAACTaGAGGCCCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSWRRTN*RPHCCC
Trigger: GCAGCAGCAGTGGGGCCTTCAGTTCGTCCTACGCCA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGACTCCTAGGAGGAACTaGTTTGGCTTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRTPRRN*FGFCTS
Trigger: AGAAGTGCAGAAGCCAAATCAGTTCCTCCTAGGAGT...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAAATCAAACTCCTTGGTaGGAGCAGGGTCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKNQTPW*EQGQAD
Trigger: ATCAGCCTGACCCTGCTCTCACCAAGGAGTTTGATT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGATCCTCCACCTCCTTaGTCCATATTCCTCCCATTT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQDPPPP*SIFLPF
Trigger: AAATGGGAGGAATATGGATCAAGGAGGTGGAGGATC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGAAGGTCTCCAGCCCTaGTACCTTGCTTTTGTACAA +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQEGLQP*YLAFVQ
Trigger: TTGTACAAAAGCAAGGTATCAGGGCTGGAGACCTTC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAACTCTCCAGGTCATGCTaGCCCTTTGTAAACCACTCA +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKLSRSC*PFVNHS
Trigger: TGAGTGGTTTACAAAGGGGCAGCATGACCTGGAGAG...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATTCTCCTTGAAGAGCTaGTGCTGGACGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSFSLKS*CWTSLS
Trigger: GGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGAGAA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGCACATTACATACAAGTaGCATCACCACACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRHITYK*HHHTRE
Trigger: CTCCCTGGTGTGGTGATGGCACTTGTATGTAATGTG...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGATCTGTCTGCTCGTCTaGCGGCTGACATTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREICLLV*RLTFRN
Trigger: ATTCCGAAATGTCAGCCGGCAGACGAGCAGACAGAT...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCACGCAGATCCCAGCATaGAGGGCTGCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSTQIPA*RAAGSP
Trigger: AGGAGAGCCAGCAGCCCTGCATGCTGGGATCTGCGT...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCAGATCCCAGCATaGAGGGCTGCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYTQIPA*RAAGSP
Trigger: AGGAGAGCCAGCAGCCCTGCATGCTGGGATCTGCGT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGAAGAACTTCATAGGCTaGCAACCGGCTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRKNFIG*QPAIYC
Trigger: ACAGTAAATAGCCGGTTGGCAGCCTATGAAGTTCTT...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACGGCTGCATATACAGCTaGTGGAAGACCGCATTCATG +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNGCIYS*WKTAFM
Trigger: CATGAATGCGGTCTTCCAGCAGCTGTATATGCAGCC...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAGGCTGCATATACAGCTaGTGGAAGACCGCATTCATG +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKGCIYS*WKTAFM
Trigger: CATGAATGCGGTCTTCCAGCAGCTGTATATGCAGCC...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGCATAATACTGCAGCTTaGTCTCCATCAAATGCCCAA +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRHNTAA*SPSNAQ
Trigger: TTGGGCATTTGATGGAGAGCAAGCTGCAGTATTATG...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTCTGGCGAGCCATTCCTaGAACTGTGTAAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCLASHS*NCVRLH
Trigger: ATGGAGCCTTACACAGTTGCAGGAATGGCTCGCCAG...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGACTGGTAGCAACGGCTaGTGTCCACATGATTGCTAT +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRTGSNG*CPHDCY
Trigger: ATAGCAATCATGTGGACAGCAGCCGTTGCTACCAGT...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTGCTCTCGGACCCATTaGTGCTTCCTGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNCSRTH*CFLIAL
Trigger: AAGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAGTCTGGCTAAGTAGGTaGAAGCCAGCAGGCATTTGC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSVWLSR*KPAGIC
Trigger: GCAAATGCCTGCTGGCTTCCACCTACTTAGCCAGAC...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAACACCTTTCCAGAAGTaGCCTCAAACCGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSTPFQK*PQTELP
Trigger: GGGAAGCTCGGTTTGAGGCCACTTCTGGAAAGGTGT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCAGCTCGCAGACGTCCTaGCCAGTCACAAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSSSQTS*PVTRHS
Trigger: GGAGTGCCTTGTGACTGGCCAGGACGTCTGCGAGCT...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGCACCGAGTGCTGAACTaGCTGCTTCTAGTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRHRVLN*LLLVLY
Trigger: ATACAAGACTAGAAGCAGCCAGTTCAGCACTCGGTG...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTTGGCTCCTCCAGGTTaGCAAGTTGGTACAGCATGT +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNLAPPG*QVGTAC
Trigger: ACATGCTGTACCAACTTGCCAACCTGGAGGAGCCAA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGGAGACTTTGAAGACTaGGAGCTTGTTTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRGDFED*ELVSES
Trigger: GCTCTCTGAAACAAGCTCCCAGTCTTCAAAGTCTCC...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTTTCCAAGATGGAGCTaGCACTTGGCTGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNFPRWS*HLADAA
Trigger: AGCAGCATCAGCCAAGTGCCAGCTCCATCTTGGAAA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTGACATTTCGGAATaGACGGGAAGAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRADISE*TGRKCF
Trigger: GAAGCACTTTCTTCCCGTCCATTCCGAAATGTCAGC...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGGCGGCACTGCTGGCTaGAGAATGACTATTTACAAT +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRGGTAG*RMTIYN
Trigger: ATTGTAAATAGTCATTCTCCAGCCAGCAGTGCCGCC...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCCACAAACCCTGAGCTaGACCTGCTATCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSPQTLS*TCYPPG
Trigger: CCCCGGTGGATAGCAGGTCCAGCTCAGGGTTTGTGG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTTGACGCGCTCTACCTaGATGGGATCTTCAATGACC +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNLTRST*MGSSMT
Trigger: GGTCATTGAAGATCCCATCCAGGTAGAGCGCGTCAA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTACAGCCCAGCTCCAGTaGTGGGAGTTCTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCTAQLQ*WEFSLK
Trigger: CTTCAAAGAGAACTCCCACCACTGGAGCTGGGCTGT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAACAGCCCAGCTCCAGTaGTGGGAGTTCTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSTAQLQ*WEFSLK
Trigger: CTTCAAAGAGAACTCCCACCACTGGAGCTGGGCTGT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGTACGGGATAGACCAATaGTCAGTCAAAACGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREYGIDQ*SVKTRL
Trigger: AAGCCGCGTTTTGACTGATCATTGGTCTATCCCGTA...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCGCACTGAAGTGTGGTaGCTTGAGCATGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSRTEVW*LEHAQQ
Trigger: CTGCTGCGCATGCTCAAGTCACCACACTTCAGTGCG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCTGGTGGAGGAGCTTTTaGTCTTTATTTACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSWWRSF*SLFTVS
Trigger: GCTGACTGTAAATAAAGATCAAAAGCTCCTCCACCA...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTGGTCAAGGGCTTCCTaGATGGCTGGGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYWSRAS*MAGSVG
Trigger: ACCCACTGACCCAGCCATTCAGGAAGCCCTTGACCA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAAAGCGAAGGAGACTTTaGAGACTGGGAGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKKRRRL*RLGACF
Trigger: GAAACAAGCTCCCAGTCTTCAAAGTCTCCTTCGCTT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAGAGCACTCTGAAGGTTaGCATGCCAGGAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSEHSEG*HARSKR
Trigger: TCTTTTGCTCCTGGCATGTCAACCTTCAGAGTGCTC...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTAGTTGTAGAGCACTCTaGAGGTTGACATGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCSCRAL*RLTCQE
Trigger: CTCCTGGCATGTCAACCTTCAGAGTGCTCTACAACT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATCAAGCCTCCAGCTTTaGGGAAGTTCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSSSLQL*GSSHRR
Trigger: CCTTCTGTGAGAACTTCCTCAAAGCTGGAGGCTTGA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTGCTCGTCTGCCGGCTaGCATTTCGGAATGGACGGG +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSCSSAG*HFGMDG
Trigger: CCCGTCCATTCCGAAATGTCAGCCGGCAGACGAGCA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAGATCTCAGCACTTGGTaGTCCGAGCAGAATATCGAT +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKDLSTW*SEQNID
Trigger: ATCGATATTCTGCTCGGATCACCAAGTGCTGAGATC...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAACCAACTTCAGAAGATaGATCCTGGCGAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSTNFRR*ILASHS
Trigger: GGAATGGCTCGCCAGGATTCATCTTCTGAAGTTGGT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCCCCAAGGAGGAAGCTaGTCATGTGTCGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSPQGGS*SCVAVL
Trigger: CAGCACTGCGACACATGATCAGCTTCCTCCTTGGGG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCGGTCCGAGAAGCCCATaGACAGCAGCGTGGTCATGT +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSGPRSP*TAAWSC
Trigger: ACATGACCACGCTGCTGTGCATGGGCTTCTCGGACC...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTCTCTCCAGGTCATGCTaGCCCTTTGTAAACCACTCA +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCLSRSC*PFVNHS
Trigger: TGAGTGGTTTACAAAGGGGCAGCATGACCTGGAGAG...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGGGGATGGAATCTCTCTaGATGACATTTACAACCAAA +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRGMESL*MTFTTK
Trigger: TTTGGTTGTAAATGTCATGCAGAGAGATTCCATCCC...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGTGGACGGGAAGAAAGTaGTTCTATGCCATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQWTGRK*FYAIFG
Trigger: ACCAAAGATGGCATAGAAGCACTTTCTTCCCGTCCA...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGATGACCAGGACCTCATaGAGTAGCTGGAATGTATTC +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQMTRTS*SSWNVF
Trigger: GAATACATTCCAGCTACTGCATGAGGTCCTGGTCAT...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCTGCTGCTGCTGGAGCTaGTGGAGGAATCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSCCCWS*WRNLQS
Trigger: GCTCTGCAGATTCCTCCACCAGCTCCAGCAGCAGCA...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTGCTGCTGCTGGAGCTaGTGGAGGAATCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYCCCWS*WRNLQS
Trigger: GCTCTGCAGATTCCTCCACCAGCTCCAGCAGCAGCA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATTGGCTCCTCCAGGTTaGCAAGTTGGTACAGCATGT +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSLAPPG*QVGTAC
Trigger: ACATGCTGTACCAACTTGCCAACCTGGAGGAGCCAA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTCAGAAGATGAATCCTaGCGAGCCATTCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNSEDES*RAIPAT
Trigger: AGTTGCAGGAATGGCTCGCCAGGATTCATCTTCTGA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACGCTCTCCGTTCTCATTaGCAGGACTGCTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYALRSH*QDCSRT
Trigger: GGTCCGAGAGCAGTCCTGCCAATGAGAACGGAGAGC...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGATATGGAGACTGAACTaGTGTTGCTACAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRIWRLN*CCYSWH
Trigger: ATGCCAACTGTAGCAACATCAGTTCAGTCTCCATAT...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGCTATGCCATCTTTGGTaGGGTCTTCATCTAATGATG +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQLCHLW*GLHLMM
Trigger: CATCATTAGATGAAGACCTCACCAAAGATGGCATAG...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAATCACGCTCATATCTGTaGGGACAATCTTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKSRSYL*GQSLQI
Trigger: GATCTGCAAAGATTGTCCTCACAGATATGAGCGTGA...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGCTGAGATGGTTCGCTaGAAGGTTTTTCCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREAEMVR*KVFPVE
Trigger: TTCAACTGGAAAAACCTTTCAGCGAACCATCTCAGC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTCCTTGAAGAGCTGCTaGTGGACGTCACTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYSLKSC*WTSLSR
Trigger: CCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGCAAAGTTTTCTTTCTaGCTAAAGAATCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSAKFSF*LKNPAG
Trigger: ACCAGCTGGATTCTTTAGGCAGAAAGAAAACTTTGC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGGGATGGAATCTCTCTaGATGACATTTACAACCAAA +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSGMESL*MTFTTK
Trigger: TTTGGTTGTAAATGTCATGCAGAGAGATTCCATCCC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGGCAGTGAAATCACTTaGTTCCATAGTTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSGSEIT*FHSLYC
Trigger: GCAATACAAACTATGGAAGCAAGTGATTTCACTGCC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTCCGGAAGCCCGGGCTaGATATACAGCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSSGSPG*IYSCWK
Trigger: CTTCCAGCAGCTGTATATGCAGCCCGGGCTTCCGGA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGCATAATACTGCAGCTTaGTCTCCATCAAATGCCCAA +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQHNTAA*SPSNAQ
Trigger: TTGGGCATTTGATGGAGAGCAAGCTGCAGTATTATG...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCTGGGCCTGCCCACTGTaGACAATGACACCAACAAGC +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSWACPL*TMTPTS
Trigger: GCTTGTTGGTGTCATTGTGCACAGTGGGCAGGCCCA...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTGGCCTGCATGGGCCTaGCCACTGTGCACAATGACA +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSWPAWA*PLCTMT
Trigger: TGTCATTGTGCACAGTGGGCAGGCCCATGCAGGCCA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGCTGCAAGCTCACTTTTaGCATGCAAGGATAATATGG +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRLQAHF*HARIIW
Trigger: CCATATTATCCTTGCATGGCAAAAGTGAGCTTGCAG...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAGTGCTGAACTCCATCTaGGTATCTGACTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSVLNSI*VSDCSV
Trigger: GACAGAACAGTCAGATACGCAGATGGAGTTCAGCAC...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGTGGTTCTTAATGAAATaGAGCATCGTGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRWFLMK*SIVKEK
Trigger: CTTTTCCTTCACGATGCTGCATTTCATTAAGAACCA...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGTCTCGGACCCATTGCTaGTTCCTGATTGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASRESRTHC*FLIALF
Trigger: AAAAAGAGCAATCAGGAAGCAGCAATGGGTCCGAGA...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAGAATGGAGTTTGGCTTaGATTGCTGCAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKEWSLA*IAANPP
Trigger: AGGTGGATTTGCAGCAATCCAAGCCAAACTCCATTC...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCTCACAGTATTGTGCTTaGTCTATGTTGCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSSQYCA*SMLPSS
Trigger: ACTAGAAGGCAACATAGACCAAGCACAATACTGTGA...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGCTTTCTTTAATTGGCTaGCTACTTCCGACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRLSLIG*LLPTRS
Trigger: TGACCTTGTCGGAAGTAGCCAGCCAATTAAAGAAAG...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGCTGATTCTTAACTaGTCCATTTCAGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQGLILN*SISEVV
Trigger: GACAACTTCTGAAATGGACCAGTTAAGAATCAGCCC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAATTCACCAATCATCATaGGAGATTCCGAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKIHQSS*EIPNPA
Trigger: AGCAGGGTTCGGAATCTCCCATGATGATTGGTGAAT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCTTTTCTACATACAACTaGGCTCCTTGTCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: LRGWLCLFDLANLADSGSFSTYN*APCLFN
Trigger: GTTGAAAAGACAAGGAGCTCAGTTGTATGTAGAAAA...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGCCTTGTTCCACATCTTaGAGATCTTCCAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQPCSTS*RSSRNS
Trigger: AGAATTTCTGGAAGATCTTCAAGATGTGGAACAAGG...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCCTCCCGTGCTTGTGCTaGACTCCATCTGCGTATCTG +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSLPCLC*TPSAYL
Trigger: CAGATACGCAGATGGAGTTCAGCACAAGCACGGGAG...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTGCTGAGATGGTTCGCTaGAAGGTTTTTCCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCAEMVR*KVFPVE
Trigger: TTCAACTGGAAAAACCTTTCAGCGAACCATCTCAGC...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTTCTCCTTGAAGAGCTaGTGCTGGACGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYFSLKS*CWTSLS
Trigger: GGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGAGAA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGCAAAGTTTTCTTTCTaGCTAAAGAATCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQAKFSF*LKNPAG
Trigger: ACCAGCTGGATTCTTTAGGCAGAAAGAAAACTTTGC...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATGGACGGGAAGAAAGTaGTTCTATGCCATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSWTGRK*FYAIFG
Trigger: ACCAAAGATGGCATAGAAGCACTTTCTTCCCGTCCA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACGCTAGTCTCACAGTCTaGTGTTCGATTAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNASLTV*CSIRFK
Trigger: TTTGAACCTAATCGAACAGCAGACTGTGAGACTAGC...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCGGAATAGTAATGGCCTaGATGGGCCTGCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSGIVMA*MGLPTV
Trigger: CACAGTGGGCAGGCCCATGCAGGCCATTACTATTCC...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTTCTTCTGTAACCACTaGACAGCCCAGCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYFFCNH*TAQLQW
Trigger: CCACTGGAGCTGGGCTGTGCAGTGGTTACAGAAGAA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAAAGACCAATGGGAATTaGATCCTGTTTCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKKTNGN*ILFHPL
Trigger: GAGAGGATGAAACAGGATCCAATTCCCATTGGTCTT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGCTTCTGAATGGAGTTTaGCTTGGATTGCTGCAAATC +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASRELLNGV*LGLLQI
Trigger: GATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAG...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGTCACAGTATTGTGCTTaGTCTATGTTGCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQSQYCA*SMLPSS
Trigger: ACTAGAAGGCAACATAGACCAAGCACAATACTGTGA...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACACCTTTCCAGAAGTaGCCTCAAACCGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYTPFQK*PQTELP
Trigger: GGGAAGCTCGGTTTGAGGCCACTTCTGGAAAGGTGT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTTGAAGAGCTGCTGCTaGACGTCACTCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYLKSCC*TSLSRS
Trigger: TGACCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCAAGGGCTTCCTGAATaGCTGGGTCAGTGGGTATCA +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSQGLPE*LGQWVS
Trigger: TGATACCCACTGACCCAGCCATTCAGGAAGCCCTTG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGATTGCTTTCTTTAATTaGCTGGCTACTTCCGACAAG +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRIAFFN*LATSDK
Trigger: CTTGTCGGAAGTAGCCAGCCAATTAAAGAAAGCAAT...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCAGCATGCAGGGCTGCTaGCTCTCCTTCACTGCTAGA +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSSMQGC*LSFTAR
Trigger: TCTAGCAGTGAAGGAGAGCCAGCAGCCCTGCATGCT...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCTGGCTTCTGCACTTCTaGATGGGCCGAAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSWLLHF*MGRSVC
Trigger: ACAGACACTTCGGCCCATCCAGAAGTGCAGAAGCCA...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTGGCTTCTGCACTTCTaGATGGGCCGAAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYWLLHF*MGRSVC
Trigger: ACAGACACTTCGGCCCATCCAGAAGTGCAGAAGCCA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGAGATCATCTAATAACTaGCACCGCAAATCAAAATAC +
Preference number: 4 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRRSSNN*HRKSKY
Trigger: GTATTTTGATTTGCGGTGCCAGTTATTAGATGATCT...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACGGGCTGATTCTTAACTaGTCCATTTCAGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNGLILN*SISEVV
Trigger: GACAACTTCTGAAATGGACCAGTTAAGAATCAGCCC...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGGAAAAGGAATTGAATaGCAAGCTGCAAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREGKGIE*QAASSL
Trigger: AAGTGAGCTTGCAGCTTGCCATTCAATTCCTTTTCC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGGAGCAGTTTCTAGCTaGTTCTTAATGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREGAVSS*FLMKCS
Trigger: GCTGCATTTCATTAAGAACCAGCTAGAAACTGCTCC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGTATTCTTTAACTCATaGGGTGGAGCAGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREVFFNS*GGAVSS
Trigger: GCTAGAAACTGCTCCACCCCATGAGTTAAAGAATAC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCTCAGAATCTTCTCCTTaGAGAGCTGCTGCTGGACGT +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSSESSP*RAAAGR
Trigger: ACGTCCAGCAGCAGCTCTTCAAGGAGAAGATTCTGA...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAGATCTATATGGAGACTaGACTGATGTTGCTACAGTT +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKDLYGD*TDVATV
Trigger: AACTGTAGCAACATCAGTTCAGTCTCCATATAGATC...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTTGGTGGAGGAGCTTTTaGTCTTTATTTACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCWWRSF*SLFTVS
Trigger: GCTGACTGTAAATAAAGATCAAAAGCTCCTCCACCA...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCAGTTGTAGAGCACTCTaGAGGTTGACATGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSSCRAL*RLTCQE
Trigger: CTCCTGGCATGTCAACCTTCAGAGTGCTCTACAACT...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTCAAGCCTCCAGCTTTaGGGAAGTTCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYSSLQL*GSSHRR
Trigger: CCTTCTGTGAGAACTTCCTCAAAGCTGGAGGCTTGA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTGGAATCTCTCTGCATaGCATTTACAACCAAACTCA +
Preference number: 4 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNWNLSA*HLQPNS
Trigger: TGAGTTTGGTTGTAAATGTCATGCAGAGAGATTCCA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTGCAGCTGCAGCCCATaGCAGTCTCATGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSCSCSP*QSHETS
Trigger: GCTTGTTTCATGAGACTGTCATGGGCTGCAGCTGCA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACCAACTTCAGAAGATaGATCCTGGCGAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYTNFRR*ILASHS
Trigger: GGAATGGCTCGCCAGGATTCATCTTCTGAAGTTGGT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGTATTCAACAAGCCACTaGCAAGCATCCAAACTTTTT +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQYSTSH*QASKLF
Trigger: AAAAAGTTTGGATGCTTGTCAGTGGCTTGTTGAATA...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACGCAGCAGGGCACTTTTaGGCAAGAGTGACAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYAAGHF*ARVTRN
Trigger: GTTTCTTGTCACTCTTGCTCAAAAGTGCCCTGCTGC...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCCTCTCCAAACACCTCTaGCCAGTTCCTCTGAGACAC +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSLSKHL*PVPLRH
Trigger: GTGTCTCAGAGGAACTGGGCAGAGGTGTTTGGAGAG...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATCGATCACAGTATTGTaGTTGGTCTATGTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSSITVL*LVYVAF
Trigger: GAAGGCAACATAGACCAAGCACAATACTGTGATCGA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTTCGATCACAGTATTGTaGTTGGTCTATGTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCSITVL*LVYVAF
Trigger: GAAGGCAACATAGACCAAGCACAATACTGTGATCGA...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACATCTGTCTGCTCGTCTaGCGGCTGACATTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYICLLV*RLTFRN
Trigger: ATTCCGAAATGTCAGCCGGCAGACGAGCAGACAGAT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTGCTAGTCTCACAGTCTaGTGTTCGATTAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCASLTV*CSIRFK
Trigger: TTTGAACCTAATCGAACAGCAGACTGTGAGACTAGC...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTAAGAACTTCATAGGCTaGCAACCGGCTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCKNFIG*QPAIYC
Trigger: ACAGTAAATAGCCGGTTGGCAGCCTATGAAGTTCTT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGTTGCTGCTTCCTGATTaGTCTTTTTCATTCAACAAG +
Preference number: 4 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQLLLPD*SFSFNK
Trigger: CTTGTTGAATGAAAAAGAGCAATCAGGAAGCAGCAA...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAAAGACCAATGGGAATTaGATCCTGTTTCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSKTNGN*ILFHPL
Trigger: GAGAGGATGAAACAGGATCCAATTCCCATTGGTCTT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTCTTCTGAATGGAGTTTaGCTTGGATTGCTGCAAATC +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCLLNGV*LGLLQI
Trigger: GATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAG...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTTTCCAAGATGGAGCTaGCACTTGGCTGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYFPRWS*HLADAA
Trigger: AGCAGCATCAGCCAAGTGCCAGCTCCATCTTGGAAA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTCTTCTCCAGAATGGTaGCCACAGCGACTCGTACTT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYSSPEW*PQRLVL
Trigger: AAGTACGAGTCGCTGTGGCCACCATTCTGGAGAAGA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGAGCGACACTAATAGGTaGTCGTTGTTTAAATATTCC +
Preference number: 4 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRSDTNR*SLFKYS
Trigger: GGAATATTTAAACAACGACCACCTATTAGTGTCGCT...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTGGAGCAGTTTCTAGCTaGTTCTTAATGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCGAVSS*FLMKCS
Trigger: GCTGCATTTCATTAAGAACCAGCTAGAAACTGCTCC...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTACGGGATAGACCAATaGTCAGTCAAAACGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYYGIDQ*SVKTRL
Trigger: AAGCCGCGTTTTGACTGATCATTGGTCTATCCCGTA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTCAGTACCCCACTTGTaGACAGCACTTGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSSVPHL*TALDVR
Trigger: CCTGACATCAAGTGCTGTTCACAAGTGGGGTACTGA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATGGAATCTCTCTGCATaGCATTTACAACCAAACTCA +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSWNLSA*HLQPNS
Trigger: TGAGTTTGGTTGTAAATGTCATGCAGAGAGATTCCA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCGATCTCAGCACTTGGTaGTCCGAGCAGAATATCGAT +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSDLSTW*SEQNID
Trigger: ATCGATATTCTGCTCGGATCACCAAGTGCTGAGATC...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACTCCTAGGAGGAACTaGTTTGGCTTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYTPRRN*FGFCTS
Trigger: AGAAGTGCAGAAGCCAAATCAGTTCCTCCTAGGAGT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACGATCCTCCACCTCCTTaGTCCATATTCCTCCCATTT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYDPPPP*SIFLPF
Trigger: AAATGGGAGGAATATGGATCAAGGAGGTGGAGGATC...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGTATTCAACAAGCCACTaGCAAGCATCCAAACTTTTT +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREYSTSH*QASKLF
Trigger: AAAAAGTTTGGATGCTTGTCAGTGGCTTGTTGAATA...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCACATTACATACAAGTaGCATCACCACACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSHITYK*HHHTRE
Trigger: CTCCCTGGTGTGGTGATGGCACTTGTATGTAATGTG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAATGTGAGGACAATCTTTaGAGATCTTCTGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: SRDCDLPAECPHNAKATKCEDNL*RSSDQN
Trigger: ATTCTGATCAGAAGATCTGCAAAGATTGTCCTCACA...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGTGGTTCTTAATGAAATaGAGCATCGTGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREWFLMK*SIVKEK
Trigger: CTTTTCCTTCACGATGCTGCATTTCATTAAGAACCA...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGTTGCTGCTTCCTGATTaGTCTTTTTCATTCAACAAG +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASRELLLPD*SFSFNK
Trigger: CTTGTTGAATGAAAAAGAGCAATCAGGAAGCAGCAA...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTGCTCTCGGACCCATTaGTGCTTCCTGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSCSRTH*CFLIAL
Trigger: AAGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACGGAGACTTTGAAGACTaGGAGCTTGTTTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYGDFED*ELVSES
Trigger: GCTCTCTGAAACAAGCTCCCAGTCTTCAAAGTCTCC...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTATTGCTTTCTTTAATTaGCTGGCTACTTCCGACAAG +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCIAFFN*LATSDK
Trigger: CTTGTCGGAAGTAGCCAGCCAATTAAAGAAAGCAAT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATACTGTACTACACTTTaGATGAAAGTCCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSYCTTL*MKVLLT
Trigger: AGTCAGCAGGACTTTCATCCAAAGTGTAGTACAGTA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTGAAATTTCCAAGCTTTaGCAAGACGTAACTCCTAGA +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCEISKL*QDVTPR
Trigger: TCTAGGAGTTACGTCTTGCCAAAGCTTGGAAATTTC...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTTTCAATTCCTTCTCCTaGGCAATTTCCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCFNSFS*AISIFI
Trigger: GATGAAAATGGAAATTGCTCAGGAGAAGGAATTGAA...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTCTGCCCAGTTCCTCTaGGACACTTTCATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYSAQFL*DTFILF
Trigger: AAACAGAATGAAAGTGTCTCAGAGGAACTGGGCAGA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCATCGTCTCATTACTGTaGGCCTCTACAGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSIVSLL*ASTVKV
Trigger: TACCTTCACTGTAGAGGCTCACAGTAATGAGACGAT...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCGTTTGGAAAAGGAATTaGATGGCAAGCTGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSVWKRN*MASCKL
Trigger: GAGCTTGCAGCTTGCCATTCAATTCCTTTTCCAAAC...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTATTAAACTTCACAGCTaGCGCAGCAATAATTGTATG +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCIKLHS*RSNNCM
Trigger: CATACAATTATTGCTGCGGCAGCTGTGAAGTTTAAT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTTGCTCTCCATCAAATaGCCAAAGAGAGACTGCACT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYLLSIK*PKRDCT
Trigger: AGTGCAGTCTCTCTTTGGGCATTTGATGGAGAGCAA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCGTGCTGAACTCCATCTaGGTATCTGACTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSVLNSI*VSDCSV
Trigger: GACAGAACAGTCAGATACGCAGATGGAGTTCAGCAC...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCACTGGTAGCAACGGCTaGTGTCCACATGATTGCTAT +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSTGSNG*CPHDCY
Trigger: ATAGCAATCATGTGGACAGCAGCCGTTGCTACCAGT...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACGAATGGAGTTTGGCTTaGATTGCTGCAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYEWSLA*IAANPP
Trigger: AGGTGGATTTGCAGCAATCCAAGCCAAACTCCATTC...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGCATTCTTCACAGACTTaGATAGAGTACTATCTTCTA +
Preference number: 4 (lower is better)
Translates to: SLLVPSLRCCTRLGASREHSSQT*IEYYLL
Trigger: TAGAAGATAGTACTCTATCCAAGTCTGTGAAGAATG...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCCACCGAGTGCTGAACTaGCTGCTTCTAGTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSHRVLN*LLLVLY
Trigger: ATACAAGACTAGAAGCAGCCAGTTCAGCACTCGGTG...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTAGCGACACTAATAGGTaGTCGTTGTTTAAATATTCC +
Preference number: 4 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCSDTNR*SLFKYS
Trigger: GGAATATTTAAACAACGACCACCTATTAGTGTCGCT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTGTCCTGAGCTGAGATaGTTCGCTGAAAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYCPELR*FAERFF
Trigger: GAAAAACCTTTCAGCGAACCATCTCAGCTCAGGACA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTCTGCCCAGTTCCTCTaGGACACTTTCATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSSAQFL*DTFILF
Trigger: AAACAGAATGAAAGTGTCTCAGAGGAACTGGGCAGA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCATATGGAGACTGAACTaGTGTTGCTACAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSIWRLN*CCYSWH
Trigger: ATGCCAACTGTAGCAACATCAGTTCAGTCTCCATAT...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACAGATACTCATCCATCTaGTCAATGAGGCTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYRYSSI*SMRLVK
Trigger: CTTCACTAGCCTCATTGATCAGATGGATGAGTATCT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTCACGCTCATATCTGTaGGGACAATCTTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSSRSYL*GQSLQI
Trigger: GATCTGCAAAGATTGTCCTCACAGATATGAGCGTGA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCTGCAAGCTCACTTTTaGCATGCAAGGATAATATGG +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSLQAHF*HARIIW
Trigger: CCATATTATCCTTGCATGGCAAAAGTGAGCTTGCAG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACAGGAAAAGTGCTCATTaGAGAAACAGCAGTACACCA +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYRKSAH*RNSSTP
Trigger: TGGTGTACTGCTGTTTCTGCAATGAGCACTTTTCCT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCACCTAGAAGACCAATaGGAATTGGATCCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSHLEDQ*ELDPVS
Trigger: TGAAACAGGATCCAATTCCCATTGGTCTTCTAGGTG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACCACCTAGAAGACCAATaGGAATTGGATCCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYHLEDQ*ELDPVS
Trigger: TGAAACAGGATCCAATTCCCATTGGTCTTCTAGGTG...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCTTTCTTTAATTGGCTaGCTACTTCCGACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSLSLIG*LLPTRS
Trigger: TGACCTTGTCGGAAGTAGCCAGCCAATTAAAGAAAG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCGGAAAAGGAATTGAATaGCAAGCTGCAAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSGKGIE*QAASSL
Trigger: AAGTGAGCTTGCAGCTTGCCATTCAATTCCTTTTCC...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCATTCACCAATCATCATaGGAGATTCCGAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSIHQSS*EIPNPA
Trigger: AGCAGGGTTCGGAATCTCCCATGATGATTGGTGAAT...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACGATCTATATGGAGACTaGACTGATGTTGCTACAGTT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYDLYGD*TDVATV
Trigger: AACTGTAGCAACATCAGTTCAGTCTCCATATAGATC...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCAGATACTCATCCATCTaGTCAATGAGGCTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSRYSSI*SMRLVK
Trigger: CTTCACTAGCCTCATTGATCAGATGGATGAGTATCT...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCAGGAAAAGTGCTCATTaGAGAAACAGCAGTACACCA +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSRKSAH*RNSSTP
Trigger: TGGTGTACTGCTGTTTCTGCAATGAGCACTTTTCCT...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCGTATTCTTTAACTCATaGGGTGGAGCAGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSVFFNS*GGAVSS
Trigger: GCTAGAAACTGCTCCACCCCATGAGTTAAAGAATAC...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTGTCTTTTCAACCGATaGTCACAGAGATTCACATTT +
Preference number: 4 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYCLFNR*SQRFTF
Trigger: AAATGTGAATCTCTGTGATCATCGGTTGAAAAGACA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCATTAAACTTCACAGCTaGCGCAGCAATAATTGTATG +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSIKLHS*RSNNCM
Trigger: CATACAATTATTGCTGCGGCAGCTGTGAAGTTTAAT...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTACTGTACTACACTTTaGATGAAAGTCCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSYCTTL*MKVLLT
Trigger: AGTCAGCAGGACTTTCATCCAAAGTGTAGTACAGTA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCGAAATTTCCAAGCTTTaGCAAGACGTAACTCCTAGA +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSEISKL*QDVTPR
Trigger: TCTAGGAGTTACGTCTTGCCAAAGCTTGGAAATTTC...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCACCTCATGCAGTAGCTaGAATGTATTCTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSTSCSS*NVFFNS
Trigger: TGAGTTAAAGAATACATTCCAGCTACTGCATGAGGT...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTTTTTCTTCAGGTCTTaGATAATGCTCTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSFFFRS*IMLLSC
Trigger: GCAAGACAAGAGCATTATTCAAGACCTGAAGAAAAA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTGTCTTTTCAACCGATaGTCACAGAGATTCACATTT +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSCLFNR*SQRFTF
Trigger: AAATGTGAATCTCTGTGATCATCGGTTGAAAAGACA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR TCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTTTTCTACATACAACTaGGCTCCTTGTCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSFSTYN*APCLFN
Trigger: GTTGAAAAGACAAGGAGCTCAGTTGTATGTAGAAAA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR GCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTGTGAGGACAATCTTTaGAGATCTTCTGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSCEDNL*RSSDQN
Trigger: ATTCTGATCAGAAGATCTGCAAAGATTGTCCTCACA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CCA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCCATTCTTCACAGACTTaGATAGAGTACTATCTTCTA +
Preference number: 4 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSHSSQT*IEYYLL
Trigger: TAGAAGATAGTACTCTATCCAAGTCTGTGAAGAATG...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp CCTCGTGGTAGGCGGGCGGGGGATCGAAGCCGCCACCACCTCCGGTaGTCCCGCCGCGGGAAGGCCCGCTGCCGTCGCTGCCGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: PRGRRAGDRSRHHLR*SRRGKARCRRCRCR
Trigger: GCGACAGCGGCAGCGACGGCAGCGGGCCTTCCCGCGGCGGGAGCACCGGAGGTGGTGGCGGCTTCGATCCCCCGCCCGCCTACCACGAGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGAGCGCCACGGCCTCGTaGATGTCGTTCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ELQELPVGGSSVCPGALGSATAS*MSFLAR
Trigger: CCTGGCCAAGAACGACATCAACGAGGCCGTGGCGCT...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGCTTGGCTCCTCCAGGTaGGCAAGTTGGTACAGCATG +
Preference number: 5 (lower is better)
Translates to: ELQELPVGGSSVCPGALGLGSSR*ASWYSM
Trigger: CATGCTGTACCAACTTGCCAACCTGGAGGAGCCAAG...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp GACAAAGCCTCTCCAGCAATCAGGGCATCTTTGGTGGACACAGACTaGTGCCGGACGCAGATCCCAGCATGCAGGGCTGCTGGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: DKASPAIRASLVDTD*CRTQIPACRAAGSP
Trigger: AGGAGAGCCAGCAGCCCTGCATGCTGGGATCTGCGTCCGGCAGCAGTCTGTGTCCACCAAAGATGCCCTGATTGCTGGAGAGGCTTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp AGGATGTCCAGGCGAAGGGCGTCCACGGTCGTCACCAGAGCCGGTTaGAAGCGCATGCAAAGCAACTTAATGGCAGACAAGAGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: RMSRRRASTVVTRAG*KRMQSNLMADKSSG
Trigger: CCCCGAGCTCTTGTCTGCCATTAAGTTGCTTTGCATGCGCTTCCAACCGGCTCTGGTGACGACCGTGGACGCCCTTCGCCTGGACATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp AAAGCCTCTCCAGCAATCAGGGCATCTTTGGTGGACACAGACTGCTaGCGGACGCAGATCCCAGCATGCAGGGCTGCTGGCTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: KASPAIRASLVDTDC*RTQIPACRAAGSPS
Trigger: TGAAGGAGAGCCAGCAGCCCTGCATGCTGGGATCTGCGTCCGGCAGCAGTCTGTGTCCACCAAAGATGCCCTGATTGCTGGAGAGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp GCATCTTTGGTGGACACAGACTGCTGCCGGACGCAGATCCCAGCATaGAGGGCTGCTGGCTCTCCTTCACTGCTAGAGCTGCAATTGCTT +
Preference number: 5 (lower is better)
Translates to: ASLVDTDCCRTQIPA*RAAGSPSLLELQLL
Trigger: AAGCAATTGCAGCTCTAGCAGTGAAGGAGAGCCAGCAGCCCTGCATGCTGGGATCTGCGTCCGGCAGCAGTCTGTGTCCACCAAAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCAGGCCGGGCCGCTCGTaGGTGAGCAGCGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSRPGRS*VSSATA
Trigger: GGCCGTGGCGCTGCTCACCAACGAGCGGCCCGGCCT...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACAGGCCGGGCCGCTCGTaGGTGAGCAGCGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYRPGRS*VSSATA
Trigger: GGCCGTGGCGCTGCTCACCAACGAGCGGCCCGGCCT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp CTGTCGGCTGACCCCAAGGAGGAAGCTGATCATGTGTCGCAGTGCTaGGTGCCGCAGAAGAAGGTCTCCAGCCCTGATACCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LSADPKEEADHVSQC*VPQKKVSSPDTLLL
Trigger: CAAAAGCAAGGTATCAGGGCTGGAGACCTTCTTCTGCGGCACTCAGCACTGCGACACATGATCAGCTTCCTCCTTGGGGTCAGCCGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACAGCGCCACGGCCTCGTaGATGTCGTTCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNSATAS*MSFLAR
Trigger: CCTGGCCAAGAACGACATCAACGAGGCCGTGGCGCT...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGGAAGACCAATGGGAATaGGATCCTGTTTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: ELQELPVGGSSVCPGALGEDQWE*DPVSSS
Trigger: AGAGGATGAAACAGGATCCAATTCCCATTGGTCTTC...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGGGAGTTTGGCTTGGATaGCTGCAAATCCACCTAATT +
Preference number: 5 (lower is better)
Translates to: ELQELPVGGSSVCPGALGGVWLG*LQIHLI
Trigger: AATTAGGTGGATTTGCAGCAATCCAAGCCAAACTCC...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp ATCTCAGGTGAAGATGGAGCTGACAGAGAGAGATCCTCAGCCTCCTaGCTTACGACGCTCACTCGGCTTTTCTTTGGCAGCACGGGTGAG +
Preference number: 5 (lower is better)
Translates to: ISGEDGADRERSSAS*LTTLTRLFFGSTGE
Trigger: CTCACCCGTGCTGCCAAAGAAAAGCCGAGTGAGCGTCGTAAGGCAGGAGGCTGAGGATCTCTCTCTGTCAGCTCCATCTTCACCTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp CGGCTGACCCCAAGGAGGAAGCTGATCATGTGTCGCAGTGCTGAGTaGCGCAGAAGAAGGTCTCCAGCCCTGATACCTTGCTTTTGTACA +
Preference number: 5 (lower is better)
Translates to: RLTPRRKLIMCRSAE*RRRRSPALIPCFCT
Trigger: TGTACAAAAGCAAGGTATCAGGGCTGGAGACCTTCTTCTGCGGCACTCAGCACTGCGACACATGATCAGCTTCCTCCTTGGGGTCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGGGCGGATCTCAGCACTaGGTGATCCGAGCAGAATAT +
Preference number: 5 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRGGSQH*VIRAEY
Trigger: ATATTCTGCTCGGATCACCAAGTGCTGAGATCCGCC...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGTTACTGTACTACACTTaGGATGAAAGTCCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: ELQELPVGGSSVCPGALGLLYYT*DESPAD
Trigger: GTCAGCAGGACTTTCATCCAAAGTGTAGTACAGTAA...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp CTGGCTACTTCCGACAAGGTCAAGCCGTCCTGCAGCTGCAGCCCATaGCAGTCTCATGAAACAAGCTACGGTGGCAGTGAAATCACTTGC +
Preference number: 5 (lower is better)
Translates to: LATSDKVKPSCSCSP*QSHETSYGGSEITC
Trigger: GCAAGTGATTTCACTGCCACCGTAGCTTGTTTCATGAGACTGTCATGGGCTGCAGCTGCAGGACGGCTTGACCTTGTCGGAAGTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp GACGACTTCTCTGGGGTCCCACATAGGGACATCTGTCTGCTCGTCTaGCGGCTGACATTTCGGAATGGACGGGAAGAAAGTGCTTCTATG +
Preference number: 5 (lower is better)
Translates to: DDFSGVPHRDICLLV*RLTFRNGREESASM
Trigger: CATAGAAGCACTTTCTTCCCGTCCATTCCGAAATGTCAGCCGGCAGACGAGCAGACAGATGTCCCTATGTGGGACCCCAGAGAAGTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp TGGGAGATTCCGAACCCTGCTGTAAGTGTCGCTCTCCGTTCTCATTaGCAGGACTGCTCTCGGACCCATTGCTGCTTCCTGATTGCTCTT +
Preference number: 5 (lower is better)
Translates to: WEIPNPAVSVALRSH*QDCSRTHCCFLIAL
Trigger: AAGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGAACGGAGAGCGACACTTACAGCAGGGTTCGGAATCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GAGCTCCAGGAGCTGCCTGTGGGAGGCTCATCTGTGTGTCCCGGTGCCTTAGGGCGCTCCATAAATCTTTaGCAATTCTCATCAGACTCT +
Preference number: 5 (lower is better)
Translates to: ELQELPVGGSSVCPGALGRSINL*QFSSDS
Trigger: AGAGTCTGATGAGAATTGCAAAAGATTTATGGAGCG...CCCTAAGGCACCGGGACACACAGATGAGCCTCCCACAGGCAGCTCCTGGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGAGATGGAGCTGGCACTaGGCTGATGCTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRRWSWH*ADAAAL
Trigger: CAAAGCAGCAGCATCAGCCAAGTGCCAGCTCCATCT...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp AAGCCGGTTAAGCCTCCAGGCCCAGCCACGGCTGCTGCAAGTCGGTaGCAAGCCAGTAAGCTTCCCGTTACCAGTTTGACTATTTCAAAA +
Preference number: 5 (lower is better)
Translates to: KPVKPPGPATAAASR*QASKLPVTSLTISK
Trigger: TTTTGAAATAGTCAAACTGGTAACGGGAAGCTTACTGGCTTGTCACCGACTTGCAGCAGCCGTGGCTGGGCCTGGAGGCTTAACCGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp TCTCTGGGGTCCCACATAGGGACATCTGTCTGCTCGTCTGCCGGCTaGCATTTCGGAATGGACGGGAAGAAAGTGCTTCTATGCCATCTT +
Preference number: 5 (lower is better)
Translates to: SLGSHIGTSVCSSAG*HFGMDGKKVLLCHL
Trigger: AAGATGGCATAGAAGCACTTTCTTCCCGTCCATTCCGAAATGTCAGCCGGCAGACGAGCAGACAGATGTCCCTATGTGGGACCCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp CAGGGCAACAGTGTTGTGAAGATTCCCAAACTCCCGTGCTTGTGCTaGACTCCATCTGCGTATCTGACTGTTCTGTCGGCTGACCCCAAG +
Preference number: 5 (lower is better)
Translates to: QGNSVVKIPKLPCLC*TPSAYLTVLSADPK
Trigger: CTTGGGGTCAGCCGACAGAACAGTCAGATACGCAGATGGAGTTCAGCACAAGCACGGGAGTTTGGGAATCTTCACAACACTGTTGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp TTCTATGCATTTAATGATGTAGCTCCTCTTGACCGCCTCCTTCACTaGGTACGCGTCACTGAGGATGGTGAGGTGCTCCTCCAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: FYAFNDVAPLDRLLH*VRVTEDGEVLLQGL
Trigger: CAGGCCTTGGAGGAGCACCTCACCATCCTCAGTGACGCGTACGCAGTGAAGGAGGCGGTCAAGAGGAGCTACATCATTAAATGCATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp CTCTTCTTGTCTTTGAGGTCCTTCTCCTCTACACTCCGCACGTCCTaGATTGTGGTAAGGATGACCGGGTCTAGCATAGGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: LFLSLRSFSSTLRTS*IVVRMTGSSIGCTT
Trigger: TGTGGTGCAGCCTATGCTAGACCCGGTCATCCTTACCACAATCCAGGACGTGCGGAGTGTAGAGGAGAAGGACCTCAAAGACAAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTCGTCACCAGAGCCGGTaGGAAGCGCATGCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCRHQSR*EAHAKQ
Trigger: TTGCTTTGCATGCGCTTCCAACCGGCTCTGGTGACG...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGCTCGTAGAGTTATCCTaGGCTCCTCCAGGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQLVELS*APPGWQ
Trigger: TTGCCAACCTGGAGGAGCCAAGGATAACTCTACGAG...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACAGATGGAGCTGGCACTaGGCTGATGCTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNRWSWH*ADAAAL
Trigger: CAAAGCAGCAGCATCAGCCAAGTGCCAGCTCCATCT...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCTCTCACAGAAGGACTTaGCGCAGCTTCTTGCCATGT +
Preference number: 5 (lower is better)
Translates to: LRGWLCLFDLANLADSGSSHRRT*RSFLPC
Trigger: ACATGGCAAGAAGCTGCGCAAAGTCCTTCTGTGAGA...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGCTGCTCTCGGACCCATaGCTGCTTCCTGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: SLLVPSLRCCTRLGASRELLSDP*LLPDCS
Trigger: AGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCAG...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp CTCCTGCCTTACGACGCTCACTCGGCTTTTCTTTGGCAGCACGGGTaGGTTCTGATCGGACACCCTTTGATAGAAGAGCATGTAGGCATT +
Preference number: 5 (lower is better)
Translates to: LLPYDAHSAFLWQHG*VLIGHPLIEEHVGI
Trigger: AATGCCTACATGCTCTTCTATCAAAGGGTGTCCGATCAGAACTCACCCGTGCTGCCAAAGAAAAGCCGAGTGAGCGTCGTAAGGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp TGTGAAGAGACATCCGAATGCAGGACCAGCAGGGCAACAGTGTTGTaGAGATTCCCAAACTCCCGTGCTTGTGCTGAACTCCATCTGCGT +
Preference number: 5 (lower is better)
Translates to: CEETSECRTSRATVL*RFPNSRACAELHLR
Trigger: ACGCAGATGGAGTTCAGCACAAGCACGGGAGTTTGGGAATCTTCACAACACTGTTGCCCTGCTGGTCCTGCATTCGGATGTCTCTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp GTCGCTCTCCGTTCTCATTGGCAGGACTGCTCTCGGACCCATTGCTaGTTCCTGATTGCTCTTTTTCATTCAACAAGGCTGTGGCGTATG +
Preference number: 5 (lower is better)
Translates to: VALRSHWQDCSRTHC*FLIALFHSTRLWRM
Trigger: CATACGCCACAGCCTTGTTGAATGAAAAAGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGAACGGAGAGCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp AGTGTCGCTCTCCGTTCTCATTGGCAGGACTGCTCTCGGACCCATTaGTGCTTCCTGATTGCTCTTTTTCATTCAACAAGGCTGTGGCGT +
Preference number: 5 (lower is better)
Translates to: SVALRSHWQDCSRTH*CFLIALFHSTRLWR
Trigger: ACGCCACAGCCTTGTTGAATGAAAAAGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGAACGGAGAGCGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGCTGATGCTGCTGCTTaGACGAAAGCGAAGGAGACT +
Preference number: 5 (lower is better)
Translates to: SLLVPSLRCCTRLGASREADAAA*TKAKET
Trigger: AGTCTCCTTCGCTTTCGTCAAAGCAGCAGCATCAGC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACGCTGATGCTGCTGCTTaGACGAAAGCGAAGGAGACT +
Preference number: 5 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNADAAA*TKAKET
Trigger: AGTCTCCTTCGCTTTCGTCAAAGCAGCAGCATCAGC...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTCACTCGGCTTTTCTTaGGCAGCACGGGTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNSLGFS*AARVSS
Trigger: AGAACTCACCCGTGCTGCCAAAGAAAAGCCGAGTGA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGGCTGCAAGCTCACTTTaGCCATGCAAGGATAATATG +
Preference number: 5 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRAASSL*PCKDNM
Trigger: CATATTATCCTTGCATGGCAAAAGTGAGCTTGCAGC...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGAAGGAAAAGTGCTCATaGCAGAAACAGCAGTACACC +
Preference number: 5 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRKEKCS*QKQQYT
Trigger: GGTGTACTGCTGTTTCTGCAATGAGCACTTTTCCTT...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp ATGGAGACTGAACTGATGTTGCTACAGTTGGCATGGCAGTTGCAGTaGGCATTTTGGTTGCTCGGGTCACAGCATGTGTTAGAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: METELMLLQLAWQLQ*AFWLLGSQHVLEWG
Trigger: GCCCCACTCTAACACATGCTGTGACCCGAGCAACCAAAATGCTCACTGCAACTGCCATGCCAACTGTAGCAACATCAGTTCAGTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp TTCTCCTTGAAGAGCTGCTGCTGGACGTCACTCTCCAGGTCATGCTaGCCCTTTGTAAACCACTCAAAGCACATCTCTCTATCTAGCTCG +
Preference number: 5 (lower is better)
Translates to: FSLKSCCWTSLSRSC*PFVNHSKHISLSSS
Trigger: CGAGCTAGATAGAGAGATGTGCTTTGAGTGGTTTACAAAGGGGCAGCATGACCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp CAAACTCAAGCCTCCAGCTTTGAGGAAGTTCTCACAGAAGGACTTTaGGCAGCTTCTTGCCATGTCGTCATCAGCCGTGGGCATGAGTTT +
Preference number: 5 (lower is better)
Translates to: QTQASSFEEVLTEGL*AASCHVVISRGHEF
Trigger: AAACTCATGCCCACGGCTGATGACGACATGGCAAGAAGCTGCGCAAAGTCCTTCTGTGAGAACTTCCTCAAAGCTGGAGGCTTGAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp CTAAAGAATCCAGCTGGTCAAGGGCTTCCTGAATGGCTGGGTCAGTaGGTATCAAGAGCAGAAGCTTCCGCACTCGTAGAGTTATCCTTG +
Preference number: 5 (lower is better)
Translates to: LKNPAGQGLPEWLGQ*VSRAEASALVELSL
Trigger: CAAGGATAACTCTACGAGTGCGGAAGCTTCTGCTCTTGATACCCACTGACCCAGCCATTCAGGAAGCCCTTGACCAGCTGGATTCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGTCTTCTGAATGGAGTTaGGCTTGGATTGCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRSSEWS*AWIAAN
Trigger: ATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAGA...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGATACAACTGAGCTCCTaGTCTTTTCAACCGATGATC +
Preference number: 5 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRIQLSS*SFQPMI
Trigger: GATCATCGGTTGAAAAGACAAGGAGCTCAGTTGTAT...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGCTTCACGGTAAGAACTaGTTCATCAGAGAACCCCAG +
Preference number: 5 (lower is better)
Translates to: GSMSSRSETMLRAFTRHQLHGKN*FIREPQ
Trigger: CTGGGGTTCTCTGATGAACAAGTTCTTACCGTGAAG...CTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCTTGATGACATGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACCTCCAGGTTGGCAAGTaGGTACAGCATGTCAAACAC +
Preference number: 5 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNLQVGK*VQHVKH
Trigger: GTGTTTGACATGCTGTACCAACTTGCCAACCTGGAG...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAACTCCAGGTTGGCAAGTaGGTACAGCATGTCAAACAC +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKLQVGK*VQHVKH
Trigger: GTGTTTGACATGCTGTACCAACTTGCCAACCTGGAG...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAACTCAAGCCTCCAGCTTaGAGGAAGTTCTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKLKPPA*RKFSQK
Trigger: CTTCTGTGAGAACTTCCTCAAAGCTGGAGGCTTGAG...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGGCCGAAGTGTCTGTTaGACTAAGAGTGTAGAGCTG +
Preference number: 5 (lower is better)
Translates to: SLLVPSLRCCTRLGASREGRSVC*TKSVEL
Trigger: CAGCTCTACACTCTTAGTCAAACAGACACTTCGGCC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACGGCCGAAGTGTCTGTTaGACTAAGAGTGTAGAGCTG +
Preference number: 5 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNGRSVC*TKSVEL
Trigger: CAGCTCTACACTCTTAGTCAAACAGACACTTCGGCC...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGACGTAACTCCTAGATaGAGAGCCATGAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRDVTPR*RAMKAS
Trigger: GGAAGCTTTCATGGCTCTCAATCTAGGAGTTACGTC...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACCGCTCTCCGTTCTCATaGGCAGGACTGCTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYRSPFS*AGLLSD
Trigger: GTCCGAGAGCAGTCCTGCCAATGAGAACGGAGAGCG...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp ATCTTCTCCTTGAAGAGCTGCTGCTGGACGTCACTCTCCAGGTCATaGTGCCCCTTTGTAAACCACTCAAAGCACATCTCTCTATCTAGC +
Preference number: 5 (lower is better)
Translates to: IFSLKSCCWTSLSRS*CPFVNHSKHISLSS
Trigger: GCTAGATAGAGAGATGTGCTTTGAGTGGTTTACAAAGGGGCAGCATGACCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGAGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp TTTTCTTTCTGCCTAAAGAATCCAGCTGGTCAAGGGCTTCCTGAATaGCTGGGTCAGTGGGTATCAAGAGCAGAAGCTTCCGCACTCGTA +
Preference number: 5 (lower is better)
Translates to: FSFCLKNPAGQGLPE*LGQWVSRAEASALV
Trigger: TACGAGTGCGGAAGCTTCTGCTCTTGATACCCACTGACCCAGCCATTCAGGAAGCCCTTGACCAGCTGGATTCTTTAGGCAGAAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAACCAGCCTCTTGTCTTaGAGGTCCTTCTCCTCTACA +
Preference number: 5 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSTSLLS*RSFSST
Trigger: TGTAGAGGAGAAGGACCTCAAAGACAAGAGGCTGGT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094933.5
CDS-3UTR CAA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCGTCACCAGAGCCGGTaGGAAGCGCATGCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSRHQSR*EAHAKQ
Trigger: TTGCTTTGCATGCGCTTCCAACCGGCTCTGGTGACG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAGAGACTGAACTGATGTaGCTACAGTTGGCATGGCAG +
Preference number: 5 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSETELM*LQLAWQ
Trigger: CTGCCATGCCAACTGTAGCAACATCAGTTCAGTCTC...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGTAAATATCTGTATGTaGTCCACAGGAGAGCACAGC +
Preference number: 5 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRVNICM*STGEHS
Trigger: GCTGTGCTCTCCTGTGGACAACATACAGATATTTAC...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAATCAGAGAACCCCAGTaGGTGGAGGAGCTTTTGATC +
Preference number: 5 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSIREPQ*VEELLI
Trigger: GATCAAAAGCTCCTCCACCAACTGGGGTTCTCTGAT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCATCTCACAGAAGGACTTaGCGCAGCTTCTTGCCATGT +
Preference number: 5 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSSHRRT*RSFLPC
Trigger: ACATGGCAAGAAGCTGCGCAAAGTCCTTCTGTGAGA...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAAATAAACACCCTGCCTaGTCTCATAGTCCACCTCTG +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKNKHPA*SHSPPL
Trigger: CAGAGGTGGACTATGAGACAAGGCAGGGTGTTTATT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGACTTGCTTCCATAGTTaGTATTGCAACTCGAGCAGC +
Preference number: 5 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRTCFHS*YCNSSS
Trigger: GCTGCTCGAGTTGCAATACAAACTATGGAAGCAAGT...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCAGTTTGGAAAAGGAATaGAATGGCAAGCTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LRGWLCLFDLANLADSGSSLEKE*NGKLQA
Trigger: AGCTTGCAGCTTGCCATTCAATTCCTTTTCCAAACT...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp GGCTGCACCAGTGCTGACACGGCCCCAAGTTCTATATCTTCTGAATaGAGTTTGGCTTGGATTGCTGCAAATCCACCTAATTCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: GCTSADTAPSSISSE*SLAWIAANPPNSPN
Trigger: GTTTGGAGAATTAGGTGGATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAGATATAGAACTTGGGGCCGTGTCAGCACTGGTGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp TGCTCTGACATCTTCTTCTGTAACCACTGCACAGCCCAGCTCCAGTaGTGGGAGTTCTCTTTGAAGTATTCTTTAGCAGCAGGGCACTTT +
Preference number: 5 (lower is better)
Translates to: CSDIFFCNHCTAQLQ*WEFSLKYSLAAGHF
Trigger: AAAGTGCCCTGCTGCTAAAGAATACTTCAAAGAGAACTCCCACCACTGGAGCTGGGCTGTGCAGTGGTTACAGAAGAAGATGTCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGAAGACCAATGGGAATaGGATCCTGTTTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SLLVPSLRCCTRLGASREEDQWE*DPVSSS
Trigger: AGAGGATGAAACAGGATCCAATTCCCATTGGTCTTC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAGGAGTTTGGCTTGGATaGCTGCAAATCCACCTAATT +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKGVWLG*LQIHLI
Trigger: AATTAGGTGGATTTGCAGCAATCCAAGCCAAACTCC...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGGTCTGAGACCATGCTGAGGGCTTTCACCAGACACCAGGGGTCTGTACAGAGGAGTTTTGTTACTTCCTaGAGGGAATTCATTTTCGCA +
Preference number: 5 (lower is better)
Translates to: RSETMLRAFTRHQGSVQRSFVTS*REFIFA
Trigger: TGCGAAAATGAATTCCCTCAAGGAAGTAACAAAACT...CCTCTGTACAGACCCCTGGTGTCTGGTGAAAGCCCTCAGCATGGTCTCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCGCATTCTTCACAGACTaGGATAGAGTACTATCTTCT +
Preference number: 5 (lower is better)
Translates to: LRGWLCLFDLANLADSGSAFFTD*DRVLSS
Trigger: AGAAGATAGTACTCTATCCAAGTCTGTGAAGAATGC...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACCTTGGCTCCTCCAGGTaGGCAAGTTGGTACAGCATG +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYLGSSR*ASWYSM
Trigger: CATGCTGTACCAACTTGCCAACCTGGAGGAGCCAAG...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCTTCTATGCCATCTTaGGTGAGGTCTTCATCTAAT +
Preference number: 5 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRASMPS*VRSSSN
Trigger: ATTAGATGAAGACCTCACCAAAGATGGCATAGAAGC...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGACTTGCTTCCATAGTTaGTATTGCAACTCGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLLVPSLRCCTRLGASRETCFHS*YCNSSS
Trigger: GCTGCTCGAGTTGCAATACAAACTATGGAAGCAAGT...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCAGGAAACAGAGAATaGCTTTCTTTAATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRAGNRE*LSLIGW
Trigger: CCAGCCAATTAAAGAAAGCAATTCTCTGTTTCCTGC...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp CTTAGGGGCTGGCTGTGCCTCTTTGACTTGGCAAATCTAGCTGACAGTGGCAGCTCCTTGTTCCACATCTaGAAGATCTTCCAGAAATTC +
Preference number: 5 (lower is better)
Translates to: LRGWLCLFDLANLADSGSSLFHI*KIFQKF
Trigger: GAATTTCTGGAAGATCTTCAAGATGTGGAACAAGGA...GCTGCCACTGTCAGCTAGATTTGCCAAGTCAAAGAGGCACAGCCAGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTGACGTAACTCCTAGATaGAGAGCCATGAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCDVTPR*RAMKAS
Trigger: GGAAGCTTTCATGGCTCTCAATCTAGGAGTTACGTC...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGCTGCAAGCTCACTTTaGCCATGCAAGGATAATATG +
Preference number: 5 (lower is better)
Translates to: SLLVPSLRCCTRLGASREAASSL*PCKDNM
Trigger: CATATTATCCTTGCATGGCAAAAGTGAGCTTGCAGC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAAAGGAAAAGTGCTCATaGCAGAAACAGCAGTACACC +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKKEKCS*QKQQYT
Trigger: GGTGTACTGCTGTTTCTGCAATGAGCACTTTTCCTT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCTGCTCTCGGACCCATaGCTGCTTCCTGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSLLSDP*LLPDCS
Trigger: AGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCAG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp TCATATGACTCCAATTTCAGAATCTTCTCCTTGAAGAGCTGCTGCTaGACGTCACTCTCCAGGTCATGCTGCCCCTTTGTAAACCACTCA +
Preference number: 5 (lower is better)
Translates to: SYDSNFRIFSLKSCC*TSLSRSCCPFVNHS
Trigger: TGAGTGGTTTACAAAGGGGCAGCATGACCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGAGAAGATTCTGAAATTGGAGTCATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp TATCCTGATAAAACAAGGCACTGTCTAAGGTCTTCTCCAGAATGGTaGCCACAGCGACTCGTACTTCTCTCACACTGCACTCCAACAAGA +
Preference number: 5 (lower is better)
Translates to: YPDKTRHCLRSSPEW*PQRLVLLSHCTPTR
Trigger: TCTTGTTGGAGTGCAGTGTGAGAGAAGTACGAGTCGCTGTGGCCACCATTCTGGAGAAGACCTTAGACAGTGCCTTGTTTTATCAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp ACTTATCCTGATAAAACAAGGCACTGTCTAAGGTCTTCTCCAGAATaGTGGCCACAGCGACTCGTACTTCTCTCACACTGCACTCCAACA +
Preference number: 5 (lower is better)
Translates to: TYPDKTRHCLRSSPE*WPQRLVLLSHCTPT
Trigger: TGTTGGAGTGCAGTGTGAGAGAAGTACGAGTCGCTGTGGCCACCATTCTGGAGAAGACCTTAGACAGTGCCTTGTTTTATCAGGATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp TCTACCTGGATGGGATCTTCAATGACCAGGACCTCATGCAGTAGCTaGAATGTATTCTTTAACTCATGGGGTGGAGCAGTTTCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: STWMGSSMTRTSCSS*NVFFNSWGGAVSSW
Trigger: CCAGCTAGAAACTGCTCCACCCCATGAGTTAAAGAATACATTCCAGCTACTGCATGAGGTCCTGGTCATTGAAGATCCCATCCAGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGGCATTCTTCACAGACTaGGATAGAGTACTATCTTCT +
Preference number: 5 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRAFFTD*DRVLSS
Trigger: AGAAGATAGTACTCTATCCAAGTCTGTGAAGAATGC...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACTATTCGATCACAGTATaGTGCTTGGTCTATGTTGCC +
Preference number: 5 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNYSITV*CLVYVA
Trigger: GGCAACATAGACCAAGCACAATACTGTGATCGAATA...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCCACAGTCTCTGATGCTGGAAGCATGTCATCAAGGTCTGAGACCATGCTGAGGTTGGTGGAGGAGCTTTaGATCTTTATTTACAGTCAG +
Preference number: 5 (lower is better)
Translates to: ATVSDAGSMSSRSETMLRLVEEL*IFIYSQ
Trigger: CTGACTGTAAATAAAGATCAAAAGCTCCTCCACCAA...CCTCAGCATGGTCTCAGACCTTGATGACATGCTTCCAGCATCAGAGACTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAATTGAAGACTGGGAGCTaGTTTCAGAGAGCAAAGTTT +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKLKTGS*FQRAKF
Trigger: AAACTTTGCTCTCTGAAACAAGCTCCCAGTCTTCAA...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAGCTTCTATGCCATCTTaGGTGAGGTCTTCATCTAAT +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKASMPS*VRSSSN
Trigger: ATTAGATGAAGACCTCACCAAAGATGGCATAGAAGC...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACGCAGGAAACAGAGAATaGCTTTCTTTAATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNAGNRE*LSLIGW
Trigger: CCAGCCAATTAAAGAAAGCAATTCTCTGTTTCCTGC...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAACACTGTCATCTGGATaGTCTGTGTCATCATCCACT +
Preference number: 5 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSTLSSG*SVSSST
Trigger: AGTGGATGATGACACAGACAATCCAGATGACAGTGT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTCACTCGGCTTTTCTTaGGCAGCACGGGTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYSLGFS*AARVSS
Trigger: AGAACTCACCCGTGCTGCCAAAGAAAAGCCGAGTGA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAAGTTTGGAAAAGGAATaGAATGGCAAGCTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKSLEKE*NGKLQA
Trigger: AGCTTGCAGCTTGCCATTCAATTCCTTTTCCAAACT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAATGGTGGGAGTTCTCTTaGAAGTATTCTTTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKWWEFS*KYSLAA
Trigger: TGCTGCTAAAGAATACTTCAAAGAGAACTCCCACCA...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp GTGATTTCATATGACTCCAATTTCAGAATCTTCTCCTTGAAGAGCTaGTGCTGGACGTCACTCTCCAGGTCATGCTGCCCCTTTGTAAAC +
Preference number: 5 (lower is better)
Translates to: VISYDSNFRIFSLKS*CWTSLSRSCCPFVN
Trigger: GTTTACAAAGGGGCAGCATGACCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGAGAAGATTCTGAAATTGGAGTCATATGAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp GTTTCTAGCTGGTTCTTAATGAAATGCAGCATCGTGAAGGAAAAGTaGTCATTGCAGAAACAGCAGTACACCACCATCTCCATGAGCGCC +
Preference number: 5 (lower is better)
Translates to: VSSWFLMKCSIVKEK*SLQKQQYTTISMSA
Trigger: GGCGCTCATGGAGATGGTGGTGTACTGCTGTTTCTGCAATGAGCACTTTTCCTTCACGATGCTGCATTTCATTAAGAACCAGCTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp TTAATGGACCGTCCGCTCTCCCAGTCAAAGCCGAATCTCATCAGGTaGATTACCAACACACTAGGTAAAGACTTAATGCACGTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LMDRPLSQSKPNLIR*ITNTLGKDLMHVLF
Trigger: GAAGAGAACGTGCATTAAGTCTTTACCTAGTGTGTTGGTAATCCACCTGATGAGATTCGGCTTTGACTGGGAGAGCGGACGGTCCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACATGCTAACCAGCCTCTaGTCTTTGAGGTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYMLTSL*SLRSFS
Trigger: GGAGAAGGACCTCAAAGACAAGAGGCTGGTTAGCAT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094933.5
CDS-3UTR CAA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTTATTCGATCACAGTATaGTGCTTGGTCTATGTTGCC +
Preference number: 5 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCYSITV*CLVYVA
Trigger: GGCAACATAGACCAAGCACAATACTGTGATCGAATA...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTATACAACTGAGCTCCTaGTCTTTTCAACCGATGATC +
Preference number: 5 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCIQLSS*SFQPMI
Trigger: GATCATCGGTTGAAAAGACAAGGAGCTCAGTTGTAT...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACCTCAAGCCTCCAGCTTaGAGGAAGTTCTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYLKPPA*RKFSQK
Trigger: CTTCTGTGAGAACTTCCTCAAAGCTGGAGGCTTGAG...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCTTTGGTCTGTGTTAGGCTACAGAACCCACAACTGAAGCTGGTTGCACGGAACCTTCATCTAATGATGTaGGCATTGTCTGTCCAACAA +
Preference number: 5 (lower is better)
Translates to: ALVCVRLQNPQLKLVARNLHLMM*ALSVQQ
Trigger: TTGTTGGACAGACAATGCCAACATCATTAGATGAAG...GTTCCGTGCAACCAGCTTCAGTTGTGGGTTCTGTAGCCTAACACAGACCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGCTTCATCTAATGATGTaGGCATTGTCTGTCCAACAA +
Preference number: 5 (lower is better)
Translates to: SLLVPSLRCCTRLGASRELHLMM*ALSVQQ
Trigger: TTGTTGGACAGACAATGCCAACATCATTAGATGAAG...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCGGCGGATCTCAGCACTaGGTGATCCGAGCAGAATAT +
Preference number: 5 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSGGSQH*VIRAEY
Trigger: ATATTCTGCTCGGATCACCAAGTGCTGAGATCCGCC...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCAAAAGAGAGACTGCACTaGGTAAAACACACTGTCATC +
Preference number: 5 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSKERLH*VKHTVI
Trigger: GATGACAGTGTGTTTTACCAAGTGCAGTCTCTCTTT...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 90 bp GAGATACTCATCCATCTGATCAATGAGGCTAGTGAAGAACTCATATaGATCCTGCTGCTCCCTCACATAGAGCTCCTTGTTCCACATCTT +
Preference number: 5 (lower is better)
Translates to: EILIHLINEASEELI*ILLLPHIELLVPHL
Trigger: AAGATGTGGAACAAGGAGCTCTATGTGAGGGAGCAGCAGGATGCATATGAGTTCTTCACTAGCCTCATTGATCAGATGGATGAGTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGCAGGGACTGTGACCTGCCTGCCGAATGTCCTCACAATGCAAAAGCAACCAAAAGTTTTGTTACTTCCTaGAGGGAATTCATTTTCGCA +
Preference number: 5 (lower is better)
Translates to: SRDCDLPAECPHNAKATKSFVTS*REFIFA
Trigger: TGCGAAAATGAATTCCCTCAAGGAAGTAACAAAACT...TTTGGTTGCTTTTGCATTGTGAGGACATTCGGCAGGCAGGTCACAGTCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCGAGACTGAACTGATGTaGCTACAGTTGGCATGGCAG +
Preference number: 5 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSETELM*LQLAWQ
Trigger: CTGCCATGCCAACTGTAGCAACATCAGTTCAGTCTC...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCATCAGAGAACCCCAGTaGGTGGAGGAGCTTTTGATC +
Preference number: 5 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSIREPQ*VEELLI
Trigger: GATCAAAAGCTCCTCCACCAACTGGGGTTCTCTGAT...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACCTTCACGGTAAGAACTaGTTCATCAGAGAACCCCAG +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYLHGKN*FIREPQ
Trigger: CTGGGGTTCTCTGATGAACAAGTTCTTACCGTGAAG...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACAATAAACACCCTGCCTaGTCTCATAGTCCACCTCTG +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYNKHPA*SHSPPL
Trigger: CAGAGGTGGACTATGAGACAAGGCAGGGTGTTTATT...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGTCTGCTTGTTCCAAGCTTAAGATGCTGTACACGCCTTGGTGCTAGCAGGGAGGGTCCATTTCAGAAGTaGTCAGATCATCTAATAACT +
Preference number: 5 (lower is better)
Translates to: SLLVPSLRCCTRLGASREGPFQK*SDHLIT
Trigger: AGTTATTAGATGATCTGACAACTTCTGAAATGGACC...CTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp ACACTTTGGATGAAAGTCCTGCTGACTGATGGCGGCACTGCTGGCTaGAGAATGACTATTTACAATAATTCTAGAAGCTCGGAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: TLWMKVLLTDGGTAG*RMTIYNNSRSSEKE
Trigger: TTCCTTTTCCGAGCTTCTAGAATTATTGTAAATAGTCATTCTCCAGCCAGCAGTGCCGCCATCAGTCAGCAGGACTTTCATCCAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp ATGACCAGGACCTCATGCAGTAGCTGGAATGTATTCTTTAACTCATaGGGTGGAGCAGTTTCTAGCTGGTTCTTAATGAAATGCAGCATC +
Preference number: 5 (lower is better)
Translates to: MTRTSCSSWNVFFNS*GGAVSSWFLMKCSI
Trigger: GATGCTGCATTTCATTAAGAACCAGCTAGAAACTGCTCCACCCCATGAGTTAAAGAATACATTCCAGCTACTGCATGAGGTCCTGGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp AGTAATCCATTTTCTGTCTCAAATACAAACTTGACGCGCTCTACCTaGATGGGATCTTCAATGACCAGGACCTCATGCAGTAGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: SNPFSVSNTNLTRST*MGSSMTRTSCSSWN
Trigger: ATTCCAGCTACTGCATGAGGTCCTGGTCATTGAAGATCCCATCCAGGTAGAGCGCGTCAAGTTTGTATTTGAGACAGAAAATGGATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp AAGGATCAACATCATCAAGGTCACTTCTTAATTCACCAATCATCATaGGAGATTCCGAACCCTGCTGTAAGTGTCGCTCTCCGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: KDQHHQGHFLIHQSS*EIPNPAVSVALRSH
Trigger: ATGAGAACGGAGAGCGACACTTACAGCAGGGTTCGGAATCTCCCATGATGATTGGTGAATTAAGAAGTGACCTTGATGATGTTGATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACGTAAATATCTGTATGTaGTCCACAGGAGAGCACAGC +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYVNICM*STGEHS
Trigger: GCTGTGCTCTCCTGTGGACAACATACAGATATTTAC...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGAAGAAGATGGACCAACGTGAACAGTGTCGGCGACCCTGATTCAGCTTTATGTGGTCCATTTCAGAAGTaGTCAGATCATCTAATAACT +
Preference number: 5 (lower is better)
Translates to: GRRWTNVNSVGDPDSALCGPFQK*SDHLIT
Trigger: AGTTATTAGATGATCTGACAACTTCTGAAATGGACC...ACATAAAGCTGAATCAGGGTCGCCGACACTGTTCACGTTGGTCCATCTTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp TGGACTGAAGCTGTTGGAAATCAAGTGGTTCCTGATGGCGTGGAAGGATGCTCACGTCAGTGTATGGGTTaGTTTGATCATAAACTTTTG +
Preference number: 5 (lower is better)
Translates to: WTEAVGNQVVPDGVEGCSRQCMG*FDHKLL
Trigger: CAAAAGTTTATGATCAAACAAACCCATACACTGACG...TGAGCATCCTTCCACGCCATCAGGAACCACTTGATTTCCAACAGCTTCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp AGGCATTTGCCTAATGACTCTTCTCTCTTGTACGGGATAGACCAATaGTCAGTCAAAACGCGGCTTTCCAGCTCATACAAATTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: RHLPNDSSLLYGIDQ*SVKTRLSSSYKLVV
Trigger: TACAACCAATTTGTATGAGCTGGAAAGCCGCGTTTTGACTGATCATTGGTCTATCCCGTACAAGAGAGAAGAGTCATTAGGCAAATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp CATTTCGGAATGGACGGGAAGAAAGTGCTTCTATGCCATCTTTGGTaGGGTCTTCATCTAATGATGTTGGCATTGTCTGTCCAACAAGTA +
Preference number: 5 (lower is better)
Translates to: HFGMDGKKVLLCHLW*GLHLMMLALSVQQV
Trigger: TACTTGTTGGACAGACAATGCCAACATCATTAGATGAAGACCTCACCAAAGATGGCATAGAAGCACTTTCTTCCCGTCCATTCCGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp GCTGACACGGCCCCAAGTTCTATATCTTCTGAATGGAGTTTGGCTTaGATTGCTGCAAATCCACCTAATTCTCCAAACTTATTTACCAAG +
Preference number: 5 (lower is better)
Translates to: ADTAPSSISSEWSLA*IAANPPNSPNLFTK
Trigger: CTTGGTAAATAAGTTTGGAGAATTAGGTGGATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAGATATAGAACTTGGGGCCGTGTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTCTTCTGAATGGAGTTaGGCTTGGATTGCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYSSEWS*AWIAAN
Trigger: ATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAGA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTTGAAGACTGGGAGCTaGTTTCAGAGAGCAAAGTTT +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYLKTGS*FQRAKF
Trigger: AAACTTTGCTCTCTGAAACAAGCTCCCAGTCTTCAA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCTGGTGGGAGTTCTCTTaGAAGTATTCTTTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSWWEFS*KYSLAA
Trigger: TGCTGCTAAAGAATACTTCAAAGAGAACTCCCACCA...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp AGCAGTCTCTCGATTATCACAAGTTTTGTTGATCTATATGGAGACTaGACTGATGTTGCTACAGTTGGCATGGCAGTTGCAGTGAGCATT +
Preference number: 5 (lower is better)
Translates to: SSLSIITSFVDLYGD*TDVATVGMAVAVSI
Trigger: AATGCTCACTGCAACTGCCATGCCAACTGTAGCAACATCAGTTCAGTCTCCATATAGATCAACAAAACTTGTGATAATCGAGAGACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 90 bp AGAACTTCACCTCTAACAAACTGGTCCAAAGAAATTTCCAAGCTTTaGCAAGACGTAACTCCTAGATTGAGAGCCATGAAAGCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RTSPLTNWSKEISKL*QDVTPRLRAMKASS
Trigger: TGAGGAAGCTTTCATGGCTCTCAATCTAGGAGTTACGTCTTGCCAAAGCTTGGAAATTTCTTTGGACCAGTTTGTTAGAGGTGAAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCTTACTGTACTACACTTaGGATGAAAGTCCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSLLYYT*DESPAD
Trigger: GTCAGCAGGACTTTCATCCAAAGTGTAGTACAGTAA...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GCAACTGAAGATACAAAATGTAAAGAACACAGGGAATGGCTATGTAAGCCCAGCAAAGAGAGACTGCACTaGGTAAAACACACTGTCATC +
Preference number: 5 (lower is better)
Translates to: ATEDTKCKEHREWLCKPSKERLH*VKHTVI
Trigger: GATGACAGTGTGTTTTACCAAGTGCAGTCTCTCTTT...GCTGGGCTTACATAGCCATTCCCTGTGTTCTTTACATTTTGTATCTTCAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp AGAGGTAGCAGAGGAAAATTCCAGTCTGCTTGTTCCAAGCTTAAGATGCTGTACTCCTTGTTCCACATCTaGAAGATCTTCCAGAAATTC +
Preference number: 5 (lower is better)
Translates to: RGSRGKFQSACSKLKMLYSLFHI*KIFQKF
Trigger: GAATTTCTGGAAGATCTTCAAGATGTGGAACAAGGA...GTACAGCATCTTAAGCTTGGAACAAGCAGACTGGAATTTTCCTCTGCTACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS-3UTR CAA 90 bp GGCTTATTTAAGGCCTTCAATGATGAGATTCTGGTTTCCCAAAAGGTGCTGAGCCGTCAGTGTATGGGTTaGTTTGATCATAAACTTTTG +
Preference number: 5 (lower is better)
Translates to: GLFKAFNDEILVSQKVLSRQCMG*FDHKLL
Trigger: CAAAAGTTTATGATCAAACAAACCCATACACTGACG...GCTCAGCACCTTTTGGGAAACCAGAATCTCATCATTGAAGGCCTTAAATAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp AGCTGGTCTGCATTAAACTTCACAGCTGCCGCAGCAATAATTGTATaGATGTTCTCAATTACTGTAGATGACTGTCCTGATTGTATCTTC +
Preference number: 5 (lower is better)
Translates to: SWSALNFTAAAAIIV*MFSITVDDCPDCIF
Trigger: GAAGATACAATCAGGACAGTCATCTACAGTAATTGAGAACATTCATACAATTATTGCTGCGGCAGCTGTGAAGTTTAATGCAGACCAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp GTAAGAACTTGTTCATCAGAGAACCCCAGTTGGTGGAGGAGCTTTTaGTCTTTATTTACAGTCAGCAGACTATCGTTCGTAAATATCTGT +
Preference number: 5 (lower is better)
Translates to: VRTCSSENPSWWRSF*SLFTVSRLSFVNIC
Trigger: ACAGATATTTACGAACGATAGTCTGCTGACTGTAAATAAAGATCAAAAGCTCCTCCACCAACTGGGGTTCTCTGATGAACAAGTTCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 90 bp TTAAAAATTTGTTCTCGTCCCATTTTCTTGAGATACTCATCCATCTaGTCAATGAGGCTAGTGAAGAACTCATATGCATCCTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LKICSRPIFLRYSSI*SMRLVKNSYASCCS
Trigger: GGAGCAGCAGGATGCATATGAGTTCTTCACTAGCCTCATTGATCAGATGGATGAGTATCTCAAGAAAATGGGACGAGAACAAATTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp AGGCGGGCGGGGGATCGAAGCCGCCACCACCTCCGGTaGTCCCGCCGCGGGAAGGCCCGCTGCCGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: RRAGDRSRHHLR*SRRGKARCRRC
Trigger: GCAGCGACGGCAGCGGGCCTTCCCGCGGCGGGAGCACCGGAGGTGGTGGCGGCTTCGATCCCCCGCCCGCCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp GGGCCTTGCGGATGGTGGCCGGGTCCGAGAAGCCCATaGACAGCAGCGTGGTCATGTGCTGCTCCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GPCGWWPGPRSP*TAAWSCAAPPP
Trigger: CGGAGGAGGAGCAGCACATGACCACGCTGCTGTGCATGGGCTTCTCGGACCCGGCCACCATCCGCAAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp GTGGACACAGACTGCTGCCGGACGCAGATCCCAGCATaGAGGGCTGCTGGCTCTCCTTCACTGCTAGAGCTG +
Preference number: 6 (lower is better)
Translates to: VDTDCCRTQIPA*RAAGSPSLLEL
Trigger: CAGCTCTAGCAGTGAAGGAGAGCCAGCAGCCCTGCATGCTGGGATCTGCGTCCGGCAGCAGTCTGTGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp ACAAGTAGCGCCACCGTTCCTCAGCCCCACAAACCCTaGGCTGGACCTGCTATCCACCGGGGGCAGGTAATC +
Preference number: 6 (lower is better)
Translates to: TSSATVPQPHKP*AGPAIHRGQVI
Trigger: GATTACCTGCCCCCGGTGGATAGCAGGTCCAGCTCAGGGTTTGTGGGGCTGAGGAACGGTGGCGCTACTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp CTGCTGCCGGACGCAGATCCCAGCATGCAGGGCTGCTaGCTCTCCTTCACTGCTAGAGCTGCAATTGCTTCC +
Preference number: 6 (lower is better)
Translates to: LLPDADPSMQGC*LSFTARAAIAS
Trigger: GGAAGCAATTGCAGCTCTAGCAGTGAAGGAGAGCCAGCAGCCCTGCATGCTGGGATCTGCGTCCGGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp CAGGATGTCCAGGCGAAGGGCGTCCACGGTCGTCACCAGAGCCGGTaGGAAGCGCATGCAAAGCAACTTAATGGCAGACAAGAGCTCGGG +
Preference number: 6 (lower is better)
Translates to: QDVQAKGVHGRHQSR*EAHAKQLNGRQELG
Trigger: CCCGAGCTCTTGTCTGCCATTAAGTTGCTTTGCATGCGCTTCCAACCGGCTCTGGTGACGACCGTGGACGCCCTTCGCCTGGACATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp AGACTGCTGCCGGACGCAGATCCCAGCATGCAGGGCTaGTGGCTCTCCTTCACTGCTAGAGCTGCAATTGCT +
Preference number: 6 (lower is better)
Translates to: RLLPDADPSMQG*WLSFTARAAIA
Trigger: AGCAATTGCAGCTCTAGCAGTGAAGGAGAGCCAGCAGCCCTGCATGCTGGGATCTGCGTCCGGCAGCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp CACCGTTCCTCAGCCCCACAAACCCTGAGCTGGACCTaGTATCCACCGGGGGCAGGTAATCAAACTCCTTGG +
Preference number: 6 (lower is better)
Translates to: HRSSAPQTLSWT*YPPGAGNQTPW
Trigger: CCAAGGAGTTTGATTACCTGCCCCCGGTGGATAGCAGGTCCAGCTCAGGGTTTGTGGGGCTGAGGAACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp AAGCCTCCAGGCCCAGCCACGGCTGCTGCAAGTCGGTaGCAAGCCAGTAAGCTTCCCGTTACCAGTTTGACT +
Preference number: 6 (lower is better)
Translates to: KPPGPATAAASR*QASKLPVTSLT
Trigger: AGTCAAACTGGTAACGGGAAGCTTACTGGCTTGTCACCGACTTGCAGCAGCCGTGGCTGGGCCTGGAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp GACCCCAAGGAGGAAGCTGATCATGTGTCGCAGTGCTaGGTGCCGCAGAAGAAGGTCTCCAGCCCTGATACC +
Preference number: 6 (lower is better)
Translates to: DPKEEADHVSQC*VPQKKVSSPDT
Trigger: GGTATCAGGGCTGGAGACCTTCTTCTGCGGCACTCAGCACTGCGACACATGATCAGCTTCCTCCTTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp AGGCGAAGGGCGTCCACGGTCGTCACCAGAGCCGGTTaGAAGCGCATGCAAAGCAACTTAATGGCAGACAAG +
Preference number: 6 (lower is better)
Translates to: RRRASTVVTRAG*KRMQSNLMADK
Trigger: CTTGTCTGCCATTAAGTTGCTTTGCATGCGCTTCCAACCGGCTCTGGTGACGACCGTGGACGCCCTTCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp CCAGCTCCCAGAGGACATCTAACACCTTTCCAGAAGTaGCCTCAAACCGAGCTTCCCGGCCGATTCGTCCGA +
Preference number: 6 (lower is better)
Translates to: PAPRGHLTPFQK*PQTELPGRFVR
Trigger: TCGGACGAATCGGCCGGGAAGCTCGGTTTGAGGCCACTTCTGGAAAGGTGTTAGATGTCCTCTGGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp CCGAACCCTGCTGTAAGTGTCGCTCTCCGTTCTCATTaGCAGGACTGCTCTCGGACCCATTGCTGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: PNPAVSVALRSH*QDCSRTHCCFL
Trigger: CAGGAAGCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGAACGGAGAGCGACACTTACAGCAGGGTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp CAGGCGAAGGGCGTCCACGGTCGTCACCAGAGCCGGTaGGAAGCGCATGCAAAGCAACTTAATGGCAGACAA +
Preference number: 6 (lower is better)
Translates to: QAKGVHGRHQSR*EAHAKQLNGRQ
Trigger: TTGTCTGCCATTAAGTTGCTTTGCATGCGCTTCCAACCGGCTCTGGTGACGACCGTGGACGCCCTTCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp CCAAGGAGGAAGCTGATCATGTGTCGCAGTGCTGAGTaGCGCAGAAGAAGGTCTCCAGCCCTGATACCTTGC +
Preference number: 6 (lower is better)
Translates to: PRRKLIMCRSAE*RRRRSPALIPC
Trigger: GCAAGGTATCAGGGCTGGAGACCTTCTTCTGCGGCACTCAGCACTGCGACACATGATCAGCTTCCTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp CCAGCTGGTCAAGGGCTTCCTGAATGGCTGGGTCAGTaGGTATCAAGAGCAGAAGCTTCCGCACTCGTAGAG +
Preference number: 6 (lower is better)
Translates to: PAGQGLPEWLGQ*VSRAEASALVE
Trigger: CTCTACGAGTGCGGAAGCTTCTGCTCTTGATACCCACTGACCCAGCCATTCAGGAAGCCCTTGACCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp GAGACAAAGCCTCTCCAGCAATCAGGGCATCTTTGGTaGACACAGACTGCTGCCGGACGCAGATCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: ETKPLQQSGHLW*TQTAAGRRSQH
Trigger: ATGCTGGGATCTGCGTCCGGCAGCAGTCTGTGTCCACCAAAGATGCCCTGATTGCTGGAGAGGCTTTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp GAAGAGACAAAGCCTCTCCAGCAATCAGGGCATCTTTaGTGGACACAGACTGCTGCCGGACGCAGATCCCAG +
Preference number: 6 (lower is better)
Translates to: EETKPLQQSGHL*WTQTAAGRRSQ
Trigger: CTGGGATCTGCGTCCGGCAGCAGTCTGTGTCCACCAAAGATGCCCTGATTGCTGGAGAGGCTTTGTCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp CAGCCTCCTGCCTTACGACGCTCACTCGGCTTTTCTTaGGCAGCACGGGTGAGTTCTGATCGGACACCCTTT +
Preference number: 6 (lower is better)
Translates to: QPPALRRSLGFS*AARVSSDRTPF
Trigger: AAAGGGTGTCCGATCAGAACTCACCCGTGCTGCCAAAGAAAAGCCGAGTGAGCGTCGTAAGGCAGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp TCCGAACCCTGCTGTAAGTGTCGCTCTCCGTTCTCATaGGCAGGACTGCTCTCGGACCCATTGCTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SEPCCKCRSPFS*AGLLSDPLLLP
Trigger: AGGAAGCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGAACGGAGAGCGACACTTACAGCAGGGTTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp CACGTAACAAGAAGAGACAAAGCCTCTCCAGCAATCAGGGCATCTTaGGTGGACACAGACTGCTGCCGGACGCAGATCCCAGCATGCAGG +
Preference number: 6 (lower is better)
Translates to: HVTRRDKASPAIRAS*VDTDCCRTQIPACR
Trigger: CCTGCATGCTGGGATCTGCGTCCGGCAGCAGTCTGTGTCCACCAAAGATGCCCTGATTGCTGGAGAGGCTTTGTCTCTTCTTGTTACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp AACTCCCGTGCTTGTGCTGAACTCCATCTGCGTATCTaGCTGTTCTGTCGGCTGACCCCAAGGAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: NSRACAELHLRI*LFCRLTPRRKL
Trigger: CAGCTTCCTCCTTGGGGTCAGCCGACAGAACAGTCAGATACGCAGATGGAGTTCAGCACAAGCACGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp GAGGAGTTGAGGTACTCTGCACACACCCCTAAGGGCTaGACCAGTGCTGACACGGCCCCAAGTTCTATATCT +
Preference number: 6 (lower is better)
Translates to: EELRYSAHTPKG*TSADTAPSSIS
Trigger: AGATATAGAACTTGGGGCCGTGTCAGCACTGGTGCAGCCCTTAGGGGTGTGTGCAGAGTACCTCAACTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp TCTGGGGTCCCACATAGGGACATCTGTCTGCTCGTCTaGCGGCTGACATTTCGGAATGGACGGGAAGAAAGT +
Preference number: 6 (lower is better)
Translates to: SGVPHRDICLLV*RLTFRNGREES
Trigger: ACTTTCTTCCCGTCCATTCCGAAATGTCAGCCGGCAGACGAGCAGACAGATGTCCCTATGTGGGACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp GCATTTTGGTTGCTCGGGTCACAGCATGTGTTAGAGTaGGGCCACCGAGTGCTGAACTGGCTGCTTCTAGTC +
Preference number: 6 (lower is better)
Translates to: AFWLLGSQHVLE*GHRVLNWLLLV
Trigger: GACTAGAAGCAGCCAGTTCAGCACTCGGTGGCCCCACTCTAACACATGCTGTGACCCGAGCAACCAAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp TGGCTTCTGCACTTCTGGATGGGCCGAAGTGTCTGTTaGACTAAGAGTGTAGAGCTGATCGCAGGCGACCCG +
Preference number: 6 (lower is better)
Translates to: WLLHFWMGRSVC*TKSVELIAGDP
Trigger: CGGGTCGCCTGCGATCAGCTCTACACTCTTAGTCAAACAGACACTTCGGCCCATCCAGAAGTGCAGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp GAACTGATTTGGCTTCTGCACTTCTGGATGGGCCGAAGTGTCTGTTaGACTAAGAGTGTAGAGCTGATCGCAGGCGACCCGGCGGATCTC +
Preference number: 6 (lower is better)
Translates to: ELIWLLHFWMGRSVC*TKSVELIAGDPADL
Trigger: GAGATCCGCCGGGTCGCCTGCGATCAGCTCTACACTCTTAGTCAAACAGACACTTCGGCCCATCCAGAAGTGCAGAAGCCAAATCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp ATGGGAGATTCCGAACCCTGCTGTAAGTGTCGCTCTCCGTTCTCATaGGCAGGACTGCTCTCGGACCCATTGCTGCTTCCTGATTGCTCT +
Preference number: 6 (lower is better)
Translates to: MGDSEPCCKCRSPFS*AGLLSDPLLLPDCS
Trigger: AGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGAACGGAGAGCGACACTTACAGCAGGGTTCGGAATCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp TTTAATGATGTAGCTCCTCTTGACCGCCTCCTTCACTaGGTACGCGTCACTGAGGATGGTGAGGTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: FNDVAPLDRLLH*VRVTEDGEVLL
Trigger: GAGGAGCACCTCACCATCCTCAGTGACGCGTACGCAGTGAAGGAGGCGGTCAAGAGGAGCTACATCATTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp TCTTTGAGGTCCTTCTCCTCTACACTCCGCACGTCCTaGATTGTGGTAAGGATGACCGGGTCTAGCATAGGC +
Preference number: 6 (lower is better)
Translates to: SLRSFSSTLRTS*IVVRMTGSSIG
Trigger: GCCTATGCTAGACCCGGTCATCCTTACCACAATCCAGGACGTGCGGAGTGTAGAGGAGAAGGACCTCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp GGGGGTCCCACTGCCAGAAGTCTTCACGGTAAGAACTaGTTCATCAGAGAACCCCAGTTGGTGGAGGAGCTT +
Preference number: 6 (lower is better)
Translates to: GGPTARSLHGKN*FIREPQLVEEL
Trigger: AAGCTCCTCCACCAACTGGGGTTCTCTGATGAACAAGTTCTTACCGTGAAGACTTCTGGCAGTGGGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp CCAAGATGGAGCTGGCACTTGGCTGATGCTGCTGCTTaGACGAAAGCGAAGGAGACTTTGAAGACTGGGAGC +
Preference number: 6 (lower is better)
Translates to: PRWSWHLADAAA*TKAKETLKTGS
Trigger: GCTCCCAGTCTTCAAAGTCTCCTTCGCTTTCGTCAAAGCAGCAGCATCAGCCAAGTGCCAGCTCCATCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TCCCACATAGGGACATCTGTCTGCTCGTCTGCCGGCTaGCATTTCGGAATGGACGGGAAGAAAGTGCTTCTA +
Preference number: 6 (lower is better)
Translates to: SHIGTSVCSSAG*HFGMDGKKVLL
Trigger: TAGAAGCACTTTCTTCCCGTCCATTCCGAAATGTCAGCCGGCAGACGAGCAGACAGATGTCCCTATGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp CTGATCGCAGGCGACCCGGCGGATCTCAGCACTTGGTaGTCCGAGCAGAATATCGATGATAAAATCAGCAAC +
Preference number: 6 (lower is better)
Translates to: LIAGDPADLSTW*SEQNIDDKISN
Trigger: GTTGCTGATTTTATCATCGATATTCTGCTCGGATCACCAAGTGCTGAGATCCGCCGGGTCGCCTGCGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp ACATCCGAATGCAGGACCAGCAGGGCAACAGTGTTGTaGAGATTCCCAAACTCCCGTGCTTGTGCTGAACTC +
Preference number: 6 (lower is better)
Translates to: TSECRTSRATVL*RFPNSRACAEL
Trigger: GAGTTCAGCACAAGCACGGGAGTTTGGGAATCTTCACAACACTGTTGCCCTGCTGGTCCTGCATTCGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp GAGGAAGTTCTCACAGAAGGACTTTGCGCAGCTTCTTaGCATGTCGTCATCAGCCGTGGGCATGAGTTTGGA +
Preference number: 6 (lower is better)
Translates to: EEVLTEGLCAAS*HVVISRGHEFG
Trigger: TCCAAACTCATGCCCACGGCTGATGACGACATGGCAAGAAGCTGCGCAAAGTCCTTCTGTGAGAACTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp GTTGCTACAGTTGGCATGGCAGTTGCAGTGAGCATTTaGGTTGCTCGGGTCACAGCATGTGTTAGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: VATVGMAVAVSI*VARVTACVRVG
Trigger: CCCCACTCTAACACATGCTGTGACCCGAGCAACCAAAATGCTCACTGCAACTGCCATGCCAACTGTAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TTCCTTGAGGGAATTCATTTTCGCACTGAAGTGTGGTaGCTTGAGCATGCGCAGCAGGATGTCCAGGCGAAG +
Preference number: 6 (lower is better)
Translates to: FLEGIHFRTEVW*LEHAQQDVQAK
Trigger: CTTCGCCTGGACATCCTGCTGCGCATGCTCAAGTCACCACACTTCAGTGCGAAAATGAATTCCCTCAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TGGCTCTCCTTCACTGCTAGAGCTGCAATTGCTTCCTaGGCTGCTGAGTCTACTTCTGATCCCAGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: WLSFTARAAIAS*AAESTSDPSRK
Trigger: TTTCCTGCTGGGATCAGAAGTAGACTCAGCAGCTCAGGAAGCAATTGCAGCTCTAGCAGTGAAGGAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TGCTATCCACCGGGGGCAGGTAATCAAACTCCTTGGTaGGAGCAGGGTCAGGCTGATGATGCATTGAAAGTA +
Preference number: 6 (lower is better)
Translates to: CYPPGAGNQTPW*EQGQADDALKV
Trigger: TACTTTCAATGCATCATCAGCCTGACCCTGCTCTCACCAAGGAGTTTGATTACCTGCCCCCGGTGGATAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TACGACGCTCACTCGGCTTTTCTTTGGCAGCACGGGTaGGTTCTGATCGGACACCCTTTGATAGAAGAGCAT +
Preference number: 6 (lower is better)
Translates to: YDAHSAFLWQHG*VLIGHPLIEEH
Trigger: ATGCTCTTCTATCAAAGGGTGTCCGATCAGAACTCACCCGTGCTGCCAAAGAAAAGCCGAGTGAGCGTCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp AAGAGCTGCTGCTGGACGTCACTCTCCAGGTCATGCTaGCCCTTTGTAAACCACTCAAAGCACATCTCTCTA +
Preference number: 6 (lower is better)
Translates to: KSCCWTSLSRSC*PFVNHSKHISL
Trigger: TAGAGAGATGTGCTTTGAGTGGTTTACAAAGGGGCAGCATGACCTGGAGAGTGACGTCCAGCAGCAGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp TTGAAGAGCTGCTGCTGGACGTCACTCTCCAGGTCATaGTGCCCCTTTGTAAACCACTCAAAGCACATCTCT +
Preference number: 6 (lower is better)
Translates to: LKSCCWTSLSRS*CPFVNHSKHIS
Trigger: AGAGATGTGCTTTGAGTGGTTTACAAAGGGGCAGCATGACCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp TATGACTCCAATTTCAGAATCTTCTCCTTGAAGAGCTaGTGCTGGACGTCACTCTCCAGGTCATGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: YDSNFRIFSLKS*CWTSLSRSCCP
Trigger: GGGGCAGCATGACCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGAGAAGATTCTGAAATTGGAGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp CATCTGTCTGCTCGTCTGCCGGCTGACATTTCGGAATaGACGGGAAGAAAGTGCTTCTATGCCATCTTTGGT +
Preference number: 6 (lower is better)
Translates to: HLSARLPADISE*TGRKCFYAIFG
Trigger: ACCAAAGATGGCATAGAAGCACTTTCTTCCCGTCCATTCCGAAATGTCAGCCGGCAGACGAGCAGACAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp ACGTCCTGGCCAGTCACAAGGCACTCCCAAATTTCTTaGGCTCGGTTCCACCCAAGATACAGTGTAGCTTCT +
Preference number: 6 (lower is better)
Translates to: TSWPVTRHSQIS*ARFHPRYSVAS
Trigger: AGAAGCTACACTGTATCTTGGGTGGAACCGAGCCAAAGAAATTTGGGAGTGCCTTGTGACTGGCCAGGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp AGCTCGCAGACGTCCTGGCCAGTCACAAGGCACTCCCAAATTTCTTaGGCTCGGTTCCACCCAAGATACAGTGTAGCTTCTTGTAAGAAA +
Preference number: 6 (lower is better)
Translates to: SSQTSWPVTRHSQIS*ARFHPRYSVASCKK
Trigger: TTTCTTACAAGAAGCTACACTGTATCTTGGGTGGAACCGAGCCAAAGAAATTTGGGAGTGCCTTGTGACTGGCCAGGACGTCTGCGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp ATCTTCCAGCGGACGCTGCCTATCGTCTCATTACTGTaGGCCTCTACAGTGAAGGTATCTTTGGTAGACTCG +
Preference number: 6 (lower is better)
Translates to: IFQRTLPIVSLL*ASTVKVSLVDS
Trigger: CGAGTCTACCAAAGATACCTTCACTGTAGAGGCTCACAGTAATGAGACGATAGGCAGCGTCCGCTGGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp AGTGTTGTGAAGATTCCCAAACTCCCGTGCTTGTGCTaGACTCCATCTGCGTATCTGACTGTTCTGTCGGCT +
Preference number: 6 (lower is better)
Translates to: SVVKIPKLPCLC*TPSAYLTVLSA
Trigger: AGCCGACAGAACAGTCAGATACGCAGATGGAGTTCAGCACAAGCACGGGAGTTTGGGAATCTTCACAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp CGTTCTCATTGGCAGGACTGCTCTCGGACCCATTGCTaGTTCCTGATTGCTCTTTTTCATTCAACAAGGCTG +
Preference number: 6 (lower is better)
Translates to: RSHWQDCSRTHC*FLIALFHSTRL
Trigger: CAGCCTTGTTGAATGAAAAAGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp CTCCGTTCTCATTGGCAGGACTGCTCTCGGACCCATTaGTGCTTCCTGATTGCTCTTTTTCATTCAACAAGG +
Preference number: 6 (lower is better)
Translates to: LRSHWQDCSRTH*CFLIALFHSTR
Trigger: CCTTGTTGAATGAAAAAGAGCAATCAGGAAGCAGCAATGGGTCCGAGAGCAGTCCTGCCAATGAGAACGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp ATATCTGTATGTTGTCCACAGGAGAGCACAGCTGTTTaGCTATCTTCCAGCGGACGCTGCCTATCGTCTCAT +
Preference number: 6 (lower is better)
Translates to: ISVCCPQESTAV*LSSSGRCLSSH
Trigger: ATGAGACGATAGGCAGCGTCCGCTGGAAGATAGCCAAACAGCTGTGCTCTCCTGTGGACAACATACAGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp AAAACAAGGCACTGTCTAAGGTCTTCTCCAGAATGGTaGCCACAGCGACTCGTACTTCTCTCACACTGCACT +
Preference number: 6 (lower is better)
Translates to: KTRHCLRSSPEW*PQRLVLLSHCT
Trigger: AGTGCAGTGTGAGAGAAGTACGAGTCGCTGTGGCCACCATTCTGGAGAAGACCTTAGACAGTGCCTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp GATAAAACAAGGCACTGTCTAAGGTCTTCTCCAGAATaGTGGCCACAGCGACTCGTACTTCTCTCACACTGC +
Preference number: 6 (lower is better)
Translates to: DKTRHCLRSSPE*WPQRLVLLSHC
Trigger: GCAGTGTGAGAGAAGTACGAGTCGCTGTGGCCACCATTCTGGAGAAGACCTTAGACAGTGCCTTGTTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp AATATCTGTATGTTGTCCACAGGAGAGCACAGCTGTTaGGCTATCTTCCAGCGGACGCTGCCTATCGTCTCA +
Preference number: 6 (lower is better)
Translates to: NICMLSTGEHSC*AIFQRTLPIVS
Trigger: TGAGACGATAGGCAGCGTCCGCTGGAAGATAGCCAAACAGCTGTGCTCTCCTGTGGACAACATACAGATATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp CCTGAGCTGCTGAGTCTACTTCTGATCCCAGCAGGAAACAGAGAATaGCTTTCTTTAATTGGCTGGCTACTTCCGACAAGGTCAAGCCGT +
Preference number: 6 (lower is better)
Translates to: PELLSLLLIPAGNRE*LSLIGWLLPTRSSR
Trigger: ACGGCTTGACCTTGTCGGAAGTAGCCAGCCAATTAAAGAAAGCAATTCTCTGTTTCCTGCTGGGATCAGAAGTAGACTCAGCAGCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp AGCTGGTTCTTAATGAAATGCAGCATCGTGAAGGAAAAGTGCTCATaGCAGAAACAGCAGTACACCACCATCTCCATGAGCGCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SWFLMKCSIVKEKCS*QKQQYTTISMSARR
Trigger: CCTCCTGGCGCTCATGGAGATGGTGGTGTACTGCTGTTTCTGCAATGAGCACTTTTCCTTCACGATGCTGCATTTCATTAAGAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp CTTAATTCACCAATCATCATGGGAGATTCCGAACCCTaGTGTAAGTGTCGCTCTCCGTTCTCATTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LNSPIIMGDSEP*CKCRSPFSLAG
Trigger: TCCTGCCAATGAGAACGGAGAGCGACACTTACAGCAGGGTTCGGAATCTCCCATGATGATTGGTGAATTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp CATCAGACTCTGAAAGACCAAGTCTGGCTAAGTAGGTaGAAGCCAGCAGGCATTTGCCTAATGACTCTTCTC +
Preference number: 6 (lower is better)
Translates to: HQTLKDQVWLSR*KPAGICLMTLL
Trigger: GAGAAGAGTCATTAGGCAAATGCCTGCTGGCTTCCACCTACTTAGCCAGACTTGGTCTTTCAGAGTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp CGTCCGCTCTCCCAGTCAAAGCCGAATCTCATCAGGTaGATTACCAACACACTAGGTAAAGACTTAATGCAC +
Preference number: 6 (lower is better)
Translates to: RPLSQSKPNLIR*ITNTLGKDLMH
Trigger: GTGCATTAAGTCTTTACCTAGTGTGTTGGTAATCCACCTGATGAGATTCGGCTTTGACTGGGAGAGCGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp AAGATCGAAACAAACTTTCCAAGATGGAGCTGGCACTaGGCTGATGCTGCTGCTTTGACGAAAGCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: KIETNFPRWSWH*ADAAALTKAKE
Trigger: CTCCTTCGCTTTCGTCAAAGCAGCAGCATCAGCCAAGTGCCAGCTCCATCTTGGAAAGTTTGTTTCGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp CCATTCATAGTGATTTCATATGACTCCAATTTCAGAATCTTCTCCTaGAAGAGCTGCTGCTGGACGTCACTCTCCAGGTCATGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: PFIVISYDSNFRIFS*KSCCWTSLSRSCCP
Trigger: GGGGCAGCATGACCTGGAGAGTGACGTCCAGCAGCAGCTCTTCAAGGAGAAGATTCTGAAATTGGAGTCATATGAAATCACTATGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp TGGCACTTGGCTGATGCTGCTGCTTTGACGAAAGCGAAGGAGACTTaGAAGACTGGGAGCTTGTTTCAGAGAGCAAAGTTTTCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: WHLADAAALTKAKET*KTGSLFQRAKFSFC
Trigger: GCAGAAAGAAAACTTTGCTCTCTGAAACAAGCTCCCAGTCTTCAAAGTCTCCTTCGCTTTCGTCAAAGCAGCAGCATCAGCCAAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp CAGGAGCAAAAGATCGAAACAAACTTTCCAAGATGGAGCTGGCACTaGGCTGATGCTGCTGCTTTGACGAAAGCGAAGGAGACTTTGAAG +
Preference number: 6 (lower is better)
Translates to: QEQKIETNFPRWSWH*ADAAALTKAKETLK
Trigger: CTTCAAAGTCTCCTTCGCTTTCGTCAAAGCAGCAGCATCAGCCAAGTGCCAGCTCCATCTTGGAAAGTTTGTTTCGATCTTTTGCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp GATAGCAGGGTCTTAATGAGCCGCAAATGTCCTGCCAATAGGATGTaGTCAGCTTCGCTAGTCTCACAGTCTGCTGTTCGATTAGGTTCA +
Preference number: 6 (lower is better)
Translates to: DSRVLMSRKCPANRM*SASLVSQSAVRLGS
Trigger: TGAACCTAATCGAACAGCAGACTGTGAGACTAGCGAAGCTGACAACATCCTATTGGCAGGACATTTGCGGCTCATTAAGACCCTGCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TCGTTGTTTAAATATTCCAGGAGCAACATTCCTCTGTaGAGAGACATCCGAATGCAGGACCAGCAGGGCAAC +
Preference number: 6 (lower is better)
Translates to: SLFKYSRSNIPL*RDIRMQDQQGN
Trigger: GTTGCCCTGCTGGTCCTGCATTCGGATGTCTCTTCACAGAGGAATGTTGCTCCTGGAATATTTAAACAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp GGTGGCAGTGAAATCACTTGCTTCCATAGTTTGTATTaGAACTCGAGCAGCGGGAATGATTTCCTCAACCCT +
Preference number: 6 (lower is better)
Translates to: GGSEITCFHSLY*NSSSGNDFLNP
Trigger: AGGGTTGAGGAAATCATTCCCGCTGCTCGAGTTGCAATACAAACTATGGAAGCAAGTGATTTCACTGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp CGTAGAGTTATCCTTGGCTCCTCCAGGTTGGCAAGTTaGTACAGCATGTCAAACACATTACATACAAGTGCC +
Preference number: 6 (lower is better)
Translates to: RRVILGSSRLAS*YSMSNTLHTSA
Trigger: GGCACTTGTATGTAATGTGTTTGACATGCTGTACCAACTTGCCAACCTGGAGGAGCCAAGGATAACTCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp GCTGCTGCTTTGACGAAAGCGAAGGAGACTTTGAAGACTGGGAGCTaGTTTCAGAGAGCAAAGTTTTCTTTCTGCCTAAAGAATCCAGCT +
Preference number: 6 (lower is better)
Translates to: AAALTKAKETLKTGS*FQRAKFSFCLKNPA
Trigger: AGCTGGATTCTTTAGGCAGAAAGAAAACTTTGCTCTCTGAAACAAGCTCCCAGTCTTCAAAGTCTCCTTCGCTTTCGTCAAAGCAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp ATACTGCAGCTTGCTCTCCATCAAATGCCCAAAGAGAGACTGCACTaGGTAAAACACACTGTCATCTGGATTGTCTGTGTCATCATCCAC +
Preference number: 6 (lower is better)
Translates to: ILQLALHQMPKERLH*VKHTVIWIVCVIIH
Trigger: GTGGATGATGACACAGACAATCCAGATGACAGTGTGTTTTACCAAGTGCAGTCTCTCTTTGGGCATTTGATGGAGAGCAAGCTGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp TGGTGCATCAGTGCTAGTAATCCATTTTCTGTCTCAAATACAAACTaGACGCGCTCTACCTGGATGGGATCTTCAATGACCAGGACCTCA +
Preference number: 6 (lower is better)
Translates to: WCISASNPFSVSNTN*TRSTWMGSSMTRTS
Trigger: TGAGGTCCTGGTCATTGAAGATCCCATCCAGGTAGAGCGCGTCAAGTTTGTATTTGAGACAGAAAATGGATTACTAGCACTGATGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp GTTTGGAGCTTAGGACTTCCAAGTTGTAGAGCACTCTaGAGGTTGACATGCCAGGAGCAAAAGATCGAAACA +
Preference number: 6 (lower is better)
Translates to: VWSLGLPSCRAL*RLTCQEQKIET
Trigger: TGTTTCGATCTTTTGCTCCTGGCATGTCAACCTTCAGAGTGCTCTACAACTTGGAAGTCCTAAGCTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TTACTGTACTACACTTTGGATGAAAGTCCTGCTGACTaGTGGCGGCACTGCTGGCTGGAGAATGACTATTTA +
Preference number: 6 (lower is better)
Translates to: LLYYTLDESPAD*WRHCWLENDYL
Trigger: TAAATAGTCATTCTCCAGCCAGCAGTGCCGCCATCAGTCAGCAGGACTTTCATCCAAAGTGTAGTACAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp ATCCATCTGATCAATGAGGCTAGTGAAGAACTCATATaGATCCTGCTGCTCCCTCACATAGAGCTCCTTGTT +
Preference number: 6 (lower is better)
Translates to: IHLINEASEELI*ILLLPHIELLV
Trigger: AACAAGGAGCTCTATGTGAGGGAGCAGCAGGATGCATATGAGTTCTTCACTAGCCTCATTGATCAGATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp TCTACCTGGATGGGATCTTCAATGACCAGGACCTCATaGAGTAGCTGGAATGTATTCTTTAACTCATGGGGT +
Preference number: 6 (lower is better)
Translates to: STWMGSSMTRTS*SSWNVFFNSWG
Trigger: ACCCCATGAGTTAAAGAATACATTCCAGCTACTGCATGAGGTCCTGGTCATTGAAGATCCCATCCAGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp TTTTCTGTCTCAAATACAAACTTGACGCGCTCTACCTaGATGGGATCTTCAATGACCAGGACCTCATGCAGT +
Preference number: 6 (lower is better)
Translates to: FSVSNTNLTRST*MGSSMTRTSCS
Trigger: ACTGCATGAGGTCCTGGTCATTGAAGATCCCATCCAGGTAGAGCGCGTCAAGTTTGTATTTGAGACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp AGGCTGTGGCGTATGCTAATGTGTCCTGAGCTGAGATaGTTCGCTGAAAGGTTTTTCCAGTTGAAGTTTCAT +
Preference number: 6 (lower is better)
Translates to: RLWRMLMCPELR*FAERFFQLKFH
Trigger: ATGAAACTTCAACTGGAAAAACCTTTCAGCGAACCATCTCAGCTCAGGACACATTAGCATACGCCACAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp TGCTTCCTGATTGCTCTTTTTCATTCAACAAGGCTGTaGCGTATGCTAATGTGTCCTGAGCTGAGATGGTTC +
Preference number: 6 (lower is better)
Translates to: CFLIALFHSTRL*RMLMCPELRWF
Trigger: GAACCATCTCAGCTCAGGACACATTAGCATACGCCACAGCCTTGTTGAATGAAAAAGAGCAATCAGGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp CATCATCAAGGTCACTTCTTAATTCACCAATCATCATaGGAGATTCCGAACCCTGCTGTAAGTGTCGCTCTC +
Preference number: 6 (lower is better)
Translates to: HHQGHFLIHQSS*EIPNPAVSVAL
Trigger: GAGAGCGACACTTACAGCAGGGTTCGGAATCTCCCATGATGATTGGTGAATTAAGAAGTGACCTTGATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp GACACGGCCCCAAGTTCTATATCTTCTGAATGGAGTTaGGCTTGGATTGCTGCAAATCCACCTAATTCTCCA +
Preference number: 6 (lower is better)
Translates to: DTAPSSISSEWS*AWIAANPPNSP
Trigger: TGGAGAATTAGGTGGATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAGATATAGAACTTGGGGCCGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp CGGAATGGACGGGAAGAAAGTGCTTCTATGCCATCTTaGGTGAGGTCTTCATCTAATGATGTTGGCATTGTC +
Preference number: 6 (lower is better)
Translates to: RNGREESASMPS*VRSSSNDVGIV
Trigger: GACAATGCCAACATCATTAGATGAAGACCTCACCAAAGATGGCATAGAAGCACTTTCTTCCCGTCCATTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp CTTGCTCTCCATCAAATGCCCAAAGAGAGACTGCACTaGGTAAAACACACTGTCATCTGGATTGTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: LALHQMPKERLH*VKHTVIWIVCV
Trigger: GACACAGACAATCCAGATGACAGTGTGTTTTACCAAGTGCAGTCTCTCTTTGGGCATTTGATGGAGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp TCTTTATTTACAGTCAGCAGACTATCGTTCGTAAATATCTGTATGTaGTCCACAGGAGAGCACAGCTGTTTGGCTATCTTCCAGCGGACG +
Preference number: 6 (lower is better)
Translates to: SLFTVSRLSFVNICM*STGEHSCLAIFQRT
Trigger: CGTCCGCTGGAAGATAGCCAAACAGCTGTGCTCTCCTGTGGACAACATACAGATATTTACGAACGATAGTCTGCTGACTGTAAATAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp GCCAGAAGTCTTCACGGTAAGAACTTGTTCATCAGAGAACCCCAGTaGGTGGAGGAGCTTTTGATCTTTATTTACAGTCAGCAGACTATC +
Preference number: 6 (lower is better)
Translates to: ARSLHGKNLFIREPQ*VEELLIFIYSQQTI
Trigger: GATAGTCTGCTGACTGTAAATAAAGATCAAAAGCTCCTCCACCAACTGGGGTTCTCTGATGAACAAGTTCTTACCGTGAAGACTTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp CTGACATTTCGGAATGGACGGGAAGAAAGTGCTTCTATGCCATCTTaGGTGAGGTCTTCATCTAATGATGTTGGCATTGTCTGTCCAACA +
Preference number: 6 (lower is better)
Translates to: LTFRNGREESASMPS*VRSSSNDVGIVCPT
Trigger: TGTTGGACAGACAATGCCAACATCATTAGATGAAGACCTCACCAAAGATGGCATAGAAGCACTTTCTTCCCGTCCATTCCGAAATGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp CCTAATGACTCTTCTCTCTTGTACGGGATAGACCAATaGTCAGTCAAAACGCGGCTTTCCAGCTCATACAAA +
Preference number: 6 (lower is better)
Translates to: PNDSSLLYGIDQ*SVKTRLSSSYK
Trigger: TTTGTATGAGCTGGAAAGCCGCGTTTTGACTGATCATTGGTCTATCCCGTACAAGAGAGAAGAGTCATTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp ATGGACGGGAAGAAAGTGCTTCTATGCCATCTTTGGTaGGGTCTTCATCTAATGATGTTGGCATTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: MDGKKVLLCHLW*GLHLMMLALSV
Trigger: GACAGACAATGCCAACATCATTAGATGAAGACCTCACCAAAGATGGCATAGAAGCACTTTCTTCCCGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp TCTTCCAGAAATTCTCAGGCACATAATACTGCAGCTTaGTCTCCATCAAATGCCCAAAGAGAGACTGCACTT +
Preference number: 6 (lower is better)
Translates to: SSRNSQAHNTAA*SPSNAQRETAL
Trigger: AAGTGCAGTCTCTCTTTGGGCATTTGATGGAGAGCAAGCTGCAGTATTATGTGCCTGAGAATTTCTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp TGGGGTGGAGCAGTTTCTAGCTGGTTCTTAATGAAATaGAGCATCGTGAAGGAAAAGTGCTCATTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: WGGAVSSWFLMK*SIVKEKCSLQK
Trigger: TTTCTGCAATGAGCACTTTTCCTTCACGATGCTGCATTTCATTAAGAACCAGCTAGAAACTGCTCCACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp TGCTGCTTTGACGAAAGCGAAGGAGACTTTGAAGACTaGGAGCTTGTTTCAGAGAGCAAAGTTTTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: CCFDESEGDFED*ELVSESKVFFL
Trigger: CAGAAAGAAAACTTTGCTCTCTGAAACAAGCTCCCAGTCTTCAAAGTCTCCTTCGCTTTCGTCAAAGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp ACAGTCAGCAGACTATCGTTCGTAAATATCTGTATGTaGTCCACAGGAGAGCACAGCTGTTTGGCTATCTTC +
Preference number: 6 (lower is better)
Translates to: TVSRLSFVNICM*STGEHSCLAIF
Trigger: GAAGATAGCCAAACAGCTGTGCTCTCCTGTGGACAACATACAGATATTTACGAACGATAGTCTGCTGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp GAAATTTCCAAGCTTTGGCAAGACGTAACTCCTAGATaGAGAGCCATGAAAGCTTCCTCACGCTCATATCTG +
Preference number: 6 (lower is better)
Translates to: EISKLWQDVTPR*RAMKASSRSYL
Trigger: CAGATATGAGCGTGAGGAAGCTTTCATGGCTCTCAATCTAGGAGTTACGTCTTGCCAAAGCTTGGAAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp ACCAGTGCTGACACGGCCCCAAGTTCTATATCTTCTGAATGGAGTTaGGCTTGGATTGCTGCAAATCCACCTAATTCTCCAAACTTATTT +
Preference number: 6 (lower is better)
Translates to: TSADTAPSSISSEWS*AWIAANPPNSPNLF
Trigger: AAATAAGTTTGGAGAATTAGGTGGATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAGATATAGAACTTGGGGCCGTGTCAGCACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TGTTCATCAGAGAACCCCAGTTGGTGGAGGAGCTTTTaGTCTTTATTTACAGTCAGCAGACTATCGTTCGTA +
Preference number: 6 (lower is better)
Translates to: CSSENPSWWRSF*SLFTVSRLSFV
Trigger: TACGAACGATAGTCTGCTGACTGTAAATAAAGATCAAAAGCTCCTCCACCAACTGGGGTTCTCTGATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp TTAAATGCCTCGGGCATACACCGCTCCATAAATCTTTaGCAATTCTCATCAGACTCTGAAAGACCAAGTCTG +
Preference number: 6 (lower is better)
Translates to: LNASGIHRSINL*QFSSDSERPSL
Trigger: CAGACTTGGTCTTTCAGAGTCTGATGAGAATTGCAAAAGATTTATGGAGCGGTGTATGCCCGAGGCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp TTGTTCATCAGAGAACCCCAGTTGGTGGAGGAGCTTTaGATCTTTATTTACAGTCAGCAGACTATCGTTCGT +
Preference number: 6 (lower is better)
Translates to: LFIREPQLVEEL*IFIYSQQTIVR
Trigger: ACGAACGATAGTCTGCTGACTGTAAATAAAGATCAAAAGCTCCTCCACCAACTGGGGTTCTCTGATGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp CTTCACGGTAAGAACTTGTTCATCAGAGAACCCCAGTaGGTGGAGGAGCTTTTGATCTTTATTTACAGTCAG +
Preference number: 6 (lower is better)
Translates to: LHGKNLFIREPQ*VEELLIFIYSQ
Trigger: CTGACTGTAAATAAAGATCAAAAGCTCCTCCACCAACTGGGGTTCTCTGATGAACAAGTTCTTACCGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp ACACGGCCCCAAGTTCTATATCTTCTGAATGGAGTTTGGCTTGGATaGCTGCAAATCCACCTAATTCTCCAAACTTATTTACCAAGTCCA +
Preference number: 6 (lower is better)
Translates to: TRPQVLYLLNGVWLG*LQIHLILQTYLPSP
Trigger: TGGACTTGGTAAATAAGTTTGGAGAATTAGGTGGATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAGATATAGAACTTGGGGCCGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TGTTCTCGTCCCATTTTCTTGAGATACTCATCCATCTaGTCAATGAGGCTAGTGAAGAACTCATATGCATCC +
Preference number: 6 (lower is better)
Translates to: CSRPIFLRYSSI*SMRLVKNSYAS
Trigger: GGATGCATATGAGTTCTTCACTAGCCTCATTGATCAGATGGATGAGTATCTCAAGAAAATGGGACGAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp GCCCCAAGTTCTATATCTTCTGAATGGAGTTTGGCTTaGATTGCTGCAAATCCACCTAATTCTCCAAACTTA +
Preference number: 6 (lower is better)
Translates to: APSSISSEWSLA*IAANPPNSPNL
Trigger: TAAGTTTGGAGAATTAGGTGGATTTGCAGCAATCCAAGCCAAACTCCATTCAGAAGATATAGAACTTGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp TCATCTTCAAGCATGGTAGCGGGGCTGATTCTTAACTaGTCCATTTCAGAAGTTGTCAGATCATCTAATAAC +
Preference number: 6 (lower is better)
Translates to: SSSSMVAGLILN*SISEVVRSSNN
Trigger: GTTATTAGATGATCTGACAACTTCTGAAATGGACCAGTTAAGAATCAGCCCCGCTACCATGCTTGAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CCA 72 bp ACCTCATGCAGTAGCTGGAATGTATTCTTTAACTCATaGGGTGGAGCAGTTTCTAGCTGGTTCTTAATGAAA +
Preference number: 6 (lower is better)
Translates to: TSCSSWNVFFNS*GGAVSSWFLMK
Trigger: TTTCATTAAGAACCAGCTAGAAACTGCTCCACCCCATGAGTTAAAGAATACATTCCAGCTACTGCATGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp GGTAAGAACTTGTTCATCAGAGAACCCCAGTTGGTGGAGGAGCTTTaGATCTTTATTTACAGTCAGCAGACTATCGTTCGTAAATATCTG +
Preference number: 6 (lower is better)
Translates to: GKNLFIREPQLVEEL*IFIYSQQTIVRKYL
Trigger: CAGATATTTACGAACGATAGTCTGCTGACTGTAAATAAAGATCAAAAGCTCCTCCACCAACTGGGGTTCTCTGATGAACAAGTTCTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp TCGATTATCACAAGTTTTGTTGATCTATATGGAGACTaGACTGATGTTGCTACAGTTGGCATGGCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: SIITSFVDLYGD*TDVATVGMAVA
Trigger: TGCAACTGCCATGCCAACTGTAGCAACATCAGTTCAGTCTCCATATAGATCAACAAAACTTGTGATAATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp ACAGACTTGGATAGAGTACTATCTTCTATTAGTTTTGTTACTTCCTaGAGGGAATTCATTTTCGCACTGAAGTGTGGTGACTTGAGCATG +
Preference number: 6 (lower is better)
Translates to: TDLDRVLSSISFVTS*REFIFALKCGDLSM
Trigger: CATGCTCAAGTCACCACACTTCAGTGCGAAAATGAATTCCCTCAAGGAAGTAACAAAACTAATAGAAGATAGTACTCTATCCAAGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 72 bp TACCAACTCCAACTTTTCTACATACAACTGAGCTCCTaGTCTTTTCAACCGATGATCACAGAGATTCACATT +
Preference number: 6 (lower is better)
Translates to: YQLQLFYIQLSS*SFQPMITEIHI
Trigger: AATGTGAATCTCTGTGATCATCGGTTGAAAAGACAAGGAGCTCAGTTGTATGTAGAAAAGTTGGAGTTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS GCA 72 bp CAAATGATTAAGCTGGTCTGCATTAAACTTCACAGCTaGCGCAGCAATAATTGTATGAATGTTCTCAATTAC +
Preference number: 6 (lower is better)
Translates to: QMIKLVCIKLHS*RSNNCMNVLNY
Trigger: GTAATTGAGAACATTCATACAATTATTGCTGCGGCAGCTGTGAAGTTTAATGCAGACCAGCTTAATCATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS CAA 90 bp AGCCAATCTAGTAATCTGTCTGTATCTATAGCATTCTTCACAGACTaGGATAGAGTACTATCTTCTATTAGTTTTGTTACTTCCTTGAGG +
Preference number: 6 (lower is better)
Translates to: SQSSNLSVSIAFFTD*DRVLSSISFVTSLR
Trigger: CCTCAAGGAAGTAACAAAACTAATAGAAGATAGTACTCTATCCAAGTCTGTGAAGAATGCTATAGATACAGACAGATTACTAGATTGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8
CDS TCA 72 bp CGTCCTTCAGAGCTAATAAAATATTCAACAAGCCACTaGCAAGCATCCAAACTTTTTGAAAGTAATGCTTCA +
Preference number: 6 (lower is better)
Translates to: RPSELIKYSTSH*QASKLFESNAS
Trigger: TGAAGCATTACTTTCAAAAAGTTTGGATGCTTGTCAGTGGCTTGTTGAATATTTTATTAGCTCTGAAGGACG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094933.5
ENSMUST00000165709.8