Pregenerated sensors for USP22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042506Ensembl transcript IDs: ENSMUST00000041683.9, ENSMUST00000174301.8
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCAGGCCTGGCCAGCACACCTGCTCATCTCCCCTGTTCTGGATaGCCCATTCACTGGAGTGTCAAGGAGGCAGACCTTCAGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: EAGLASTPAHLPCSG*PIHWSVKEADLQEA Trigger: AGCTTCCTGAAGGTCTGCCTCCTTGACACTCCAGTGAATGGGGCATCCAGAACAGGGGAGATGAGCAGGTGTGCTGGCCAGGCCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR CCA 90 bp | AGAGGAGGCAGGCCTGGCCAGCACACCTGCTCATCTCCCCTGTTCTaGATGCCCCATTCACTGGAGTGTCAAGGAGGCAGACCTTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: RGGRPGQHTCSSPLF*MPHSLECQGGRPSG Trigger: TCCTGAAGGTCTGCCTCCTTGACACTCCAGTGAATGGGGCATCCAGAACAGGGGAGATGAGCAGGTGTGCTGGCCAGGCCTGCCTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR TCA 90 bp | GGTCTACGGCTCAGAGCCTGGCTCTTAGGAAATAGTTGCCTGTTCTaGTGGGCAACTCCTGGGTGGGTGCCAACAGGCTCCTGGGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: GLRLRAWLLGNSCLF*WATPGWVPTGSWVS Trigger: GCTTACCCAGGAGCCTGTTGGCACCCACCCAGGAGTTGCCCATCAGAACAGGCAACTATTTCCTAAGAGCCAGGCTCTGAGCCGTAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR GCA 90 bp | AGCAGCAGGCAGAGTGGTTGGTCTGCTCTGAAGACATCCATCCCCTaGCTACAAGGCTCAAAGGACAGGTGCTGGGGAGGCAGCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: SSRQSGWSALKTSIP*LQGSKDRCWGGSSF Trigger: AAAGGAGCTGCCTCCCCAGCACCTGTCCTTTGAGCCTTGTAGGCAGGGGATGGATGTCTTCAGAGCAGACCAACCACTCTGCCTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR GCA 90 bp | CCAGAGGGCTGCTGCTGCAAGCACTCTGCCCTCTGGCATCATCTCTaGCCACTCTACAGCTTTGACGGGCTCATTTTCAAGGAGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PEGCCCKHSALWHHL*PLYSFDGLIFKEAG Trigger: ACCTGCCTCCTTGAAAATGAGCCCGTCAAAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAGCCCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR CCA 90 bp | CTGCCCTTCATGCCAGAGGGCTGCTGCTGCAAGCACTCTGCCCTCTaGCATCATCTCTGCCCACTCTACAGCTTTGACGGGCTCATTTTC | + |
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Preference number: 1 (lower is better) Translates to: LPFMPEGCCCKHSAL*HHLCPLYSFDGLIF Trigger: GAAAATGAGCCCGTCAAAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAGCCCTCTGGCATGAAGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR TCA 90 bp | CAAGCACTCTGCCCTCTGGCATCATCTCTGCCCACTCTACAGCTTTaGCGGGCTCATTTTCAAGGAGGCAGGTGGGATGGCAGGGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: QALCPLASSLPTLQL*RAHFQGGRWDGRVK Trigger: CTTCACCCTGCCATCCCACCTGCCTCCTTGAAAATGAGCCCGTCAAAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR GCA 90 bp | CTCCTTCAGACAGCTAGCTCAGAGCCATGTGTTCTAGGCACCGCCTaGCCAGAGCACTTTCCTCCTTCAGTTACAGGTGCTCCAACTTCG | + |
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Preference number: 1 (lower is better) Translates to: LLQTASSEPCVLGTA*PEHFPPSVTGAPTS Trigger: CGAAGTTGGAGCACCTGTAACTGAAGGAGGAAAGTGCTCTGGGCAGGCGGTGCCTAGAACACATGGCTCTGAGCTAGCTGTCTGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
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| 3UTR TCA 90 bp | GAGCCACCAAGGAATCTACTGCAAAGATCAAGATACCAGGGACTCTaGTATCTGCCTGGCCACCAGCCGTTTGAGAAGGAAGGCAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: EPPRNLLQRSRYQGL*YLPGHQPFEKEGRA Trigger: TGCCCTGCCTTCCTTCTCAAACGGCTGGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR GCA 90 bp | CAAGGAATCTACTGCAAAGATCAAGATACCAGGGACTCTGATATCTaGCTGGCCACCAGCCGTTTGAGAAGGAAGGCAGGGCACAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: QGIYCKDQDTRDSDI*LATSRLRRKAGHRA Trigger: TGCCCTGTGCCCTGCCTTCCTTCTCAAACGGCTGGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR CCA 90 bp | TGCCCCATTCACTGGAGTGTCAAGGAGGCAGACCTTCAGGAAGCTTaGAGCTCTGGTTCCCGTGGCAACTGCAGTGAAGTTTTTCATGTG | + |
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Preference number: 1 (lower is better) Translates to: CPIHWSVKEADLQEA*SSGSRGNCSEVFHV Trigger: CACATGAAAAACTTCACTGCAGTTGCCACGGGAACCAGAGCTCCAAGCTTCCTGAAGGTCTGCCTCCTTGACACTCCAGTGAATGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR CCA 90 bp | CAGAATGGAGGCAAGCGGGTGACACTATGCAATGCAGTCTCCAACTaGACCTCAGCTTCAAATCTCACACAGTCACTAAACCTCCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: QNGGKRVTLCNAVSN*TSASNLTQSLNLPG Trigger: CCCAGGGAGGTTTAGTGACTGTGTGAGATTTGAAGCTGAGGTCCAGTTGGAGACTGCATTGCATAGTGTCACCCGCTTGCCTCCATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR TCA 90 bp | AGCCGTTTGAGAAGGAAGGCAGGGCACAGGGCAAGGAAACAACACTaGTCAAAAGAGCAAGACACGCTCTCAGAGGGGAGAGAATCATCT | + |
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Preference number: 1 (lower is better) Translates to: SRLRRKAGHRARKQH*SKEQDTLSEGRESS Trigger: AGATGATTCTCTCCCCTCTGAGAGCGTGTCTTGCTCTTTTGATCAGTGTTGTTTCCTTGCCCTGTGCCCTGCCTTCCTTCTCAAACGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR GCA 90 bp | AGAAACATGGGAGGATTGGGTCAATGGAGCCACCAAGGAATCTACTaGAAAGATCAAGATACCAGGGACTCTGATATCTGCCTGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: RNMGGLGQWSHQGIY*KDQDTRDSDICLAT Trigger: GGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCCCATGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR TCA 90 bp | GTTATGCTTCAGCAGTTCCAGCTCCCGTTTAGTTGGTTCCCAAGTTaGAAACTTCTCTCCAACACCTTGCATCTTCCAAGCCTTGCGCTG | + |
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Preference number: 1 (lower is better) Translates to: VMLQQFQLPFSWFPS*KLLSNTLHLPSLAL Trigger: CAGCGCAAGGCTTGGAAGATGCAAGGTGTTGGAGAGAAGTTTTCAACTTGGGAACCAACTAAACGGGAGCTGGAACTGCTGAAGCATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
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| 3UTR GCA 90 bp | GAGGCAGACCTTCAGGAAGCTTGGAGCTCTGGTTCCCGTGGCAACTaGAGTGAAGTTTTTCATGTGGACTTGTTCACAAATACAACATGC | + |
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Preference number: 1 (lower is better) Translates to: EADLQEAWSSGSRGN*SEVFHVDLFTNTTC Trigger: GCATGTTGTATTTGTGAACAAGTCCACATGAAAAACTTCACTGCAGTTGCCACGGGAACCAGAGCTCCAAGCTTCCTGAAGGTCTGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR CCA 90 bp | GGGCAGGCAAAAAGACCAAGAAGAAACATGGGAGGATTGGGTCAATaGAGCCACCAAGGAATCTACTGCAAAGATCAAGATACCAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: GQAKRPRRNMGGLGQ*SHQGIYCKDQDTRD Trigger: GTCCCTGGTATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCCCATGTTTCTTCTTGGTCTTTTTGCCTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR CCA 90 bp | CAACTGGACCTCAGCTTCAAATCTCACACAGTCACTAAACCTCCCTaGGCAGGCAAAAAGACCAAGAAGAAACATGGGAGGATTGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: QLDLSFKSHTVTKPP*AGKKTKKKHGRIGS Trigger: TGACCCAATCCTCCCATGTTTCTTCTTGGTCTTTTTGCCTGCCCAGGGAGGTTTAGTGACTGTGTGAGATTTGAAGCTGAGGTCCAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR GCA 90 bp | ACTATAGTGAACACAGAATGGAGGCAAGCGGGTGACACTATGCAATaGAGTCTCCAACTGGACCTCAGCTTCAAATCTCACACAGTCACT | + |
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Preference number: 1 (lower is better) Translates to: TIVNTEWRQAGDTMQ*SLQLDLSFKSHTVT Trigger: AGTGACTGTGTGAGATTTGAAGCTGAGGTCCAGTTGGAGACTGCATTGCATAGTGTCACCCGCTTGCCTCCATTCTGTGTTCACTATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR GCA 90 bp | AGACCTATGGTACAATTGGAGGTGATCTTCCGCCTCTTTGGGTTATaGTTCAGCAGTTCCAGCTCCCGTTTAGTTGGTTCCCAAGTTGAA | + |
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Preference number: 1 (lower is better) Translates to: RPMVQLEVIFRLFGL*FSSSSSRLVGSQVE Trigger: TTCAACTTGGGAACCAACTAAACGGGAGCTGGAACTGCTGAAGCATAACCCAAAGAGGCGGAAGATCACCTCCAATTGTACCATAGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
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| 3UTR CCA 90 bp | ACCTCCCTGGGCAGGCAAAAAGACCAAGAAGAAACATGGGAGGATTaGGTCAATGGAGCCACCAAGGAATCTACTGCAAAGATCAAGATA | + |
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Preference number: 1 (lower is better) Translates to: TSLGRQKDQEETWED*VNGATKESTAKIKI Trigger: TATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCCCATGTTTCTTCTTGGTCTTTTTGCCTGCCCAGGGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR TCA 90 bp | TGCAGTGAAGTTTTTCATGTGGACTTGTTCACAAATACAACATGCTaGCCCTGGGGCATCTCCACAGTAGAGTCCCACAAACATGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: CSEVFHVDLFTNTTC*PWGISTVESHKHGP Trigger: TGGACCATGTTTGTGGGACTCTACTGTGGAGATGCCCCAGGGTCAGCATGTTGTATTTGTGAACAAGTCCACATGAAAAACTTCACTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR CAA 90 bp | GCAAGCACTCTGCCCTCTGGCATCATCTCTGCCCACTCTACAGCTTaGACGGGCTCATTTTCAAGGAGGCAGGTGGGATGGCAGGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: ASTLPSGIISAHSTA*TGSFSRRQVGWQGE Trigger: TTCACCCTGCCATCCCACCTGCCTCCTTGAAAATGAGCCCGTCAAAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR CCA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGCTGATGGGCAACTCCTaGGTGGGTGCCAACAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQLMGNS*VGANRL Trigger: GAGCCTGTTGGCACCCACCCAGGAGTTGCCCATCAG...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR TCA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGGTGGTTGGTCTGCTCTaGAGACATCCATCCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQVVGLL*RHPSPA Trigger: GGCAGGGGATGGATGTCTTCAGAGCAGACCAACCAC...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTCACAGCGGTGCCTATCCGACAGAAAGAAGTCTCTCAGGAGCGGAGTGTGGGCATCTTCCAAGCCTTaGGCTGCTCCTCTTTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: ISQRCLSDRKKSLRSGVWASSKP*AAPLWQ Trigger: TTGCCAAAGAGGAGCAGCGCAAGGCTTGGAAGATGC...CCACACTCCGCTCCTGAGAGACTTCTTTCTGTCGGATAGGCACCGCTGTGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTTCTAGGATGAGGAACCCTTTTCCTGCCTTGCTATCCAGAGGGGCAACTGGATGCCCCATTCACTaGAGTGTCAAGGAGGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: GGSRMRNPFPALLSRGATGCPIH*SVKEAD Trigger: GTCTGCCTCCTTGACACTCCAGTGAATGGGGCATCC...AGTTGCCCCTCTGGATAGCAAGGCAGGAAAAGGGTTCCTCATCCTAGAACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR TCA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGGGAAAGGCAGTGGTATaGGGAGAAACACCAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQGKAVV*GETPRP Trigger: GGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCC...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR CCA 90 bp | GAATCTACTGCAAAGATCAAGATACCAGGGACTCTGATATCTGCCTGGCCACCATTTGTAGCCTGTGGGTaGCCTCAACCTGGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ESTAKIKIPGTLISAWPPFVACG*PQPGPG Trigger: CCCAGGCCCAGGTTGAGGCCACCCACAGGCTACAAA...TGGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGCGGTGCCTATCCGACAGAAAGAAGTCTCTCAGGAGCGGAGTGTGGGTCAGGATCTTCCGCCTCTTTaGGTTATGCTTCAGCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: TAVPIRQKEVSQERSVGQDLPPL*VMLQQF Trigger: GAACTGCTGAAGCATAACCCAAAGAGGCGGAAGATC...CTGACCCACACTCCGCTCCTGAGAGACTTCTTTCTGTCGGATAGGCACCGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAGATGCATGTGCGGCAGCCATAGAGTTGGCAGACCTTGCTACAGGTACAGCAAGGAAACAACACTaGTCAAAAGAGCAAGACACG | + |
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Preference number: 2 (lower is better) Translates to: GPDACAAAIELADLATGTARKQH*SKEQDT Trigger: CGTGTCTTGCTCTTTTGATCAGTGTTGTTTCCTTGC...TGTACCTGTAGCAAGGTCTGCCAACTCTATGGCTGCCGCACATGCATCTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAGATGCATGTGCGGCAGCCATAGAGTTGGCAGACCTTGCTACAGGTACAAATAAACTTCATGAATaGCCCTGCCAGGAGAACTGG | + |
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Preference number: 2 (lower is better) Translates to: GPDACAAAIELADLATGTNKLHE*PCQENW Trigger: CCAGTTCTCCTGGCAGGGTCATTCATGAAGTTTATT...TGTACCTGTAGCAAGGTCTGCCAACTCTATGGCTGCCGCACATGCATCTGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR TCA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGAGTTTCTGCTGCCCCTaGCCTCGAGTGATTTTCACA | + |
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Preference number: 2 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQSFCCP*PRVIFT Trigger: TGTGAAAATCACTCGAGGTCAGGGGCAGCAGAAACT...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR TCA 90 bp | ATCCGACAGAAAGAAGTCTCTCAGGAGCGGAGTGTGGGTCAGCGCCTGCACGATAGTTGGTTCCCAAGTTaGAAACTTCTCTCCAACACC | + |
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Preference number: 2 (lower is better) Translates to: IRQKEVSQERSVGQRLHDSWFPS*KLLSNT Trigger: GGTGTTGGAGAGAAGTTTTCAACTTGGGAACCAACT...ATCGTGCAGGCGCTGACCCACACTCCGCTCCTGAGAGACTTCTTTCTGTCGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTGCTCAGGGCGCACTCCACTCTaGTCATCCCACCTGACACAT | + |
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Preference number: 2 (lower is better) Translates to: WKGSGMRRNTKTLDSSCSGRTPL*SSHLTH Trigger: ATGTGTCAGGTGGGATGAGCAGAGTGGAGTGCGCCC...TGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTGCTCAGGCTCAAAGGACAGGTaGTGGGGAGGCAGCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: WKGSGMRRNTKTLDSSCSGSKDR*WGGSSF Trigger: AAAGGAGCTGCCTCCCCAGCACCTGTCCTTTGAGCC...TGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTTCTAGGATGAGGAACCCTTTTCCTGCCTTGCTATCCAGAGGGGCAACTAAGCGGGTGACACTATaGAATGCAGTCTCCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: GGSRMRNPFPALLSRGATKRVTL*NAVSNW Trigger: CCAGTTGGAGACTGCATTGCATAGTGTCACCCGCTT...AGTTGCCCCTCTGGATAGCAAGGCAGGAAAAGGGTTCCTCATCCTAGAACCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR CCA 90 bp | ACTAGAGAAGAACAGGGCAACTGTTACCACGTGACAAAGTTTCTGCTGCCCCTGGCTAAGGAGCTGGGCTaGGCCCTGTACTGCTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: TREEQGNCYHVTKFLLPLAKELG*ALYCSF Trigger: AAAAGAGCAGTACAGGGCCCAGCCCAGCTCCTTAGC...CAGGGGCAGCAGAAACTTTGTCACGTGGTAACAGTTGCCCTGTTCTTCTCTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR TCA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGCCGTGGCAACTGCAGTaGAGTTTTTCATGTGGACTT | + |
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Preference number: 2 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQPWQLQ*SFSCGL Trigger: AAGTCCACATGAAAAACTTCACTGCAGTTGCCACGG...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTGCTCACTGCTGCAAGCACTCTaGCCTCTGGCATCATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: WKGSGMRRNTKTLDSSCSLLQAL*PLASSL Trigger: CAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAG...TGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR CCA 90 bp | ACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTGTCAAAGGACAGGTGCTaGGGAGGCAGCTCCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TILERRDIPSALHARGLLSKDRC*GGSSFP Trigger: TGGAAAGGAGCTGCCTCCCCAGCACCTGTCCTTTGA...CAGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR CCA 90 bp | ACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTGTTTCAAGGAGGCAGGTaGGATGGCAGGGTGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TILERRDIPSALHARGLLFQGGR*DGRVKQ Trigger: CTGCTTCACCCTGCCATCCCACCTGCCTCCTTGAAA...CAGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR GCA 90 bp | ACTAGAGAAGAACAGGGCAACTGTTACCACGTGACAAAGTTTCTGCTGCCCCTGCTCTGGCATCATCTCTaGCCACTCTACAGCTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: TREEQGNCYHVTKFLLPLLWHHL*PLYSFD Trigger: GTCAAAGCTGTAGAGTGGGCAGAGATGATGCCAGAG...CAGGGGCAGCAGAAACTTTGTCACGTGGTAACAGTTGCCCTGTTCTTCTCTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR-3UTR CCA 90 bp | GAATCTACTGCAAAGATCAAGATACCAGGGACTCTGATATCTGCCTGGCCACCAAGCAGGCAGAGTGGTTaGTCTGCTCTGAAGACATCC | + |
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Preference number: 2 (lower is better) Translates to: ESTAKIKIPGTLISAWPPSRQSG*SALKTS Trigger: GGATGTCTTCAGAGCAGACCAACCACTCTGCCTGCT...TGGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR CAA 90 bp | GAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTaGCTCAGAAGTGGACAGCCTAGGCTTGTCCAGAGATACATGCAA | + |
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Preference number: 2 (lower is better) Translates to: ERQWYEEKHQDPRFQ*LRSGQPRLVQRYMQ Trigger: TTGCATGTATCTCTGGACAAGCCTAGGCTGTCCACTTCTGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| 3UTR CAA 90 bp | AACCTCCCTGGGCAGGCAAAAAGACCAAGAAGAAACATGGGAGGATaGGGTCAATGGAGCCACCAAGGAATCTACTGCAAAGATCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: NLPGQAKRPRRNMGG*GQWSHQGIYCKDQD Trigger: ATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCCCATGTTTCTTCTTGGTCTTTTTGCCTGCCCAGGGAGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTGGTTCTAGGATGAGGAACCCTTTTCCTGCCTTGCTATCCAGAGGGGCAACTATGTTAAAACCATGGTaGAGGAGAATGCTTTCGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GGSRMRNPFPALLSRGATMLKPW*RRMLSD Trigger: ATCCGAAAGCATTCTCCTTCACCATGGTTTTAACAT...AGTTGCCCCTCTGGATAGCAAGGCAGGAAAAGGGTTCCTCATCCTAGAACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTGTCATGTCGGGAAGTTTaGCAACTTGCTCTCTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: TILERRDIPSALHARGLLSCREV*QLALSL Trigger: GAGAGAGAGAGCAAGTTGGCAAACTTCCCGACATGA...CAGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR TCA 90 bp | GACAGCCTAGGCTTGTCCAGAGATACATGCAAAATATCTTACAATAAACTTCATTGGCCACCAGCCGTTTaGGAAGGAAGGCAGGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: DSLGLSRDTCKISYNKLHWPPAV*EGRQGT Trigger: TGTGCCCTGCCTTCCTTCTCAAACGGCTGGTGGCCA...ATGAAGTTTATTGTAAGATATTTTGCATGTATCTCTGGACAAGCCTAGGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAAGAGCAAGACACGCTCTCAGAGGGGAGAGAATCATCTAGAATTCCGTATCATGGTGTTCTGATTTaGGGGGAGCAGGGATCATGT | + |
|
Preference number: 2 (lower is better) Translates to: SKEQDTLSEGRESSRIPYHGVLI*GEQGSC Trigger: ACATGATCCCTGCTCCCCCCAAATCAGAACACCATG...ATACGGAATTCTAGATGATTCTCTCCCCTCTGAGAGCGTGTCTTGCTCTTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAAGAGCAAGACACGCTCTCAGAGGGGAGAGAATCATCTAGAATTCCGTATGGAAGTTTGCCAACTTaGTCTCTCTCTCTTTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SKEQDTLSEGRESSRIPYGSLPT*SLSLSL Trigger: GAGAGAAAGAGAGAGAGAGCAAGTTGGCAAACTTCC...ATACGGAATTCTAGATGATTCTCTCCCCTCTGAGAGCGTGTCTTGCTCTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAAGAGCAAGACACGCTCTCAGAGGGGAGAGAATCATCTAGAATTCCGTATTGGAAAAAGAGCAAATaGGGTAGAGGTAAGACGACA | + |
|
Preference number: 2 (lower is better) Translates to: SKEQDTLSEGRESSRIPYWKKSK*GRGKTT Trigger: TGTCGTCTTACCTCTACCCCATTTGCTCTTTTTCCA...ATACGGAATTCTAGATGATTCTCTCCCCTCTGAGAGCGTGTCTTGCTCTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR TCA 90 bp | GACAGCCTAGGCTTGTCCAGAGATACATGCAAAATATCTTACAATAAACTTCATCCCACTCTACAGCTTTaGCGGGCTCATTTTCAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: DSLGLSRDTCKISYNKLHPTLQL*RAHFQG Trigger: TCCTTGAAAATGAGCCCGTCAAAGCTGTAGAGTGGG...ATGAAGTTTATTGTAAGATATTTTGCATGTATCTCTGGACAAGCCTAGGCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR GCA 90 bp | GACAGCCTAGGCTTGTCCAGAGATACATGCAAAATATCTTACAATAAACTTCATAAGACATCCATCCCCTaGCTACAAGGCTCAAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: DSLGLSRDTCKISYNKLHKTSIP*LQGSKD Trigger: GTCCTTTGAGCCTTGTAGGCAGGGGATGGATGTCTT...ATGAAGTTTATTGTAAGATATTTTGCATGTATCTCTGGACAAGCCTAGGCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CAA 90 bp | ACCAAGACCCTAGATTCCAGTTGCTCAGAAGTGGACAGCCTAGGCTaGTCCAGAGATACATGCAAAATATCTTACAATAAACTTCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: TKTLDSSCSEVDSLG*SRDTCKISYNKLHE Trigger: TTCATGAAGTTTATTGTAAGATATTTTGCATGTATCTCTGGACAAGCCTAGGCTGTCCACTTCTGAGCAACTGGAATCTAGGGTCTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | AGGACCCCAGGACAGAGAGGGAGGGCCAGATGCATGTaGGGCAGCCATAGAGTTGGCAGACCTTGCTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTPGQRGRARCM*GSHRVGRPCYR Trigger: CCTGTAGCAAGGTCTGCCAACTCTATGGCTGCCGCACATGCATCTGGCCCTCCCTCTCTGTCCTGGGGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | GCCCTTCATGCCAGAGGGCTGCTGCTGCAAGCACTCTaGCCTCTGGCATCATCTCTGCCCACTCTACAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ALHARGLLLQAL*PLASSLPTLQL Trigger: AAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAGCCCTCTGGCATGAAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | ACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTGCTaGAAGCACTCTGCCCTCTGGCATCATCTCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TYPLPFMPEGCC*KHSALWHHLCP Trigger: TGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | GAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTaGTGCAAGCACTCTGCCCTCTGGCATCATCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ETYPLPFMPEGC*CKHSALWHHLC Trigger: GCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR TCA 72 bp | CCAGGGACTCTGATATCTGCCTGGCCACCAGCCGTTTaGGAAGGAAGGCAGGGCACAGGGCAAGGAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGTLISAWPPAV*EGRQGTGQGNN Trigger: GTTGTTTCCTTGCCCTGTGCCCTGCCTTCCTTCTCAAACGGCTGGTGGCCAGGCAGATATCAGAGTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | CAGAGTGGTTGGTCTGCTCTGAAGACATCCATCCCCTaGCTACAAGGCTCAAAGGACAGGTGCTGGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QSGWSALKTSIP*LQGSKDRCWGG Trigger: GCCTCCCCAGCACCTGTCCTTTGAGCCTTGTAGGCAGGGGATGGATGTCTTCAGAGCAGACCAACCACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | GAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTaGTGCTGCAAGCACTCTGCCCTCTGGCATCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: EETYPLPFMPEG*CCKHSALWHHL Trigger: GAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | CTGGCCAGCACACCTGCTCATCTCCCCTGTTCTGGATaGCCCATTCACTGGAGTGTCAAGGAGGCAGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: LASTPAHLPCSG*PIHWSVKEADL Trigger: AAGGTCTGCCTCCTTGACACTCCAGTGAATGGGGCATCCAGAACAGGGGAGATGAGCAGGTGTGCTGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | ACCAAGCAGGAGCTGGGGCTCTGCATCTCACAGCGGTaGCTATCCGACAGAAAGAAGTCTCTCAGGAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: TKQELGLCISQR*LSDRKKSLRSG Trigger: TCCGCTCCTGAGAGACTTCTTTCTGTCGGATAGGCACCGCTGTGAGATGCAGAGCCCCAGCTCCTGCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
||
| 3UTR TCA 72 bp | TGCCCTCTGGCATCATCTCTGCCCACTCTACAGCTTTaGCGGGCTCATTTTCAAGGAGGCAGGTGGGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: CPLASSLPTLQL*RAHFQGGRWDG Trigger: GCCATCCCACCTGCCTCCTTGAAAATGAGCCCGTCAAAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | TGGCGCCAGCAGTGTATGGAAGAGAGGGGTAGGCAATaGAGCCCTGTGGTGAGATGCACTTCTGTGACCATC | + |
|
Preference number: 3 (lower is better) Translates to: WRQQCMEERGRQ*SPVVRCTSVTI Trigger: GATGGTCACAGAAGTGCATCTCACCACAGGGCTGCATTGCCTACCCCTCTCTTCCATACACTGCTGGCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CCA 72 bp | CCTGCTCATCTCCCCTGTTCTGGATGCCCCATTCACTaGAGTGTCAAGGAGGCAGACCTTCAGGAAGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PAHLPCSGCPIH*SVKEADLQEAW Trigger: CCAAGCTTCCTGAAGGTCTGCCTCCTTGACACTCCAGTGAATGGGGCATCCAGAACAGGGGAGATGAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CCA 72 bp | AAACTGTTCCTTAGCCATCCACACATGCCTGTCCAGTaGAGACAGCACGCTGAGGACCCCAGGACAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KLFLSHPHMPVQ*RQHAEDPRTER Trigger: CCTCTCTGTCCTGGGGTCCTCAGCGTGCTGTCTCCACTGGACAGGCATGTGTGGATGGCTAAGGAACAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | ACAGCTAGCTCAGAGCCATGTGTTCTAGGCACCGCCTaGCCAGAGCACTTTCCTCCTTCAGTTACAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TASSEPCVLGTA*PEHFPPSVTGA Trigger: AGCACCTGTAACTGAAGGAGGAAAGTGCTCTGGGCAGGCGGTGCCTAGAACACATGGCTCTGAGCTAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
||
| 3UTR CCA 72 bp | CACTGGAGTGTCAAGGAGGCAGACCTTCAGGAAGCTTaGAGCTCTGGTTCCCGTGGCAACTGCAGTGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HWSVKEADLQEA*SSGSRGNCSEV Trigger: AACTTCACTGCAGTTGCCACGGGAACCAGAGCTCCAAGCTTCCTGAAGGTCTGCCTCCTTGACACTCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | TGCTGCTGCAAGCACTCTGCCCTCTGGCATCATCTCTaGCCACTCTACAGCTTTGACGGGCTCATTTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CCCKHSALWHHL*PLYSFDGLIFK Trigger: CTTGAAAATGAGCCCGTCAAAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCAGATGCATGTGCGGCAGCCATAGAGTTGGCAGACCTTGCTACAGGTACAGGGAAGTTTGCCAACTaGCTCTCTCTCTCTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GPDACAAAIELADLATGTGKFAN*LSLSFS Trigger: AGAGAAAGAGAGAGAGAGCAAGTTGGCAAACTTCCC...TGTACCTGTAGCAAGGTCTGCCAACTCTATGGCTGCCGCACATGCATCTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGAGCGGCCGCTTAGTTTaGCCACAGCTATGTCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQSGRLV*PQLCHS Trigger: GGAATGACATAGCTGTGGCAAAACTAAGCGGCCGCT...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR TCA 72 bp | AGAAGGAAGGCAGGGCACAGGGCAAGGAAACAACACTaGTCAAAAGAGCAAGACACGCTCTCAGAGGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRKAGHRARKQH*SKEQDTLSEGR Trigger: TCTCCCCTCTGAGAGCGTGTCTTGCTCTTTTGATCAGTGTTGTTTCCTTGCCCTGTGCCCTGCCTTCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR TCA 72 bp | CAGCAGCTTGTATGGAATGTGTGGGGAGCGGTGCCCTaGGTAAAACTCCTGGAAGAGAGAGGACATCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: QQLVWNVWGAVP*VKLLEERGHLT Trigger: TGTGAGATGTCCTCTCTCTTCCAGGAGTTTTACTCAGGGCACCGCTCCCCACACATTCCATACAAGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACACGTGTTCCCCAGGTTGATCAGTCCACGCAGACCTATGGTACAATTGGAGTGCATCTTCCAAGCCTaGCGCTGCTCCTCTTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KHVFPRLISPRRPMVQLECIFQA*RCSSLA Trigger: TGCCAAAGAGGAGCAGCGCAAGGCTTGGAAGATGCA...CTCCAATTGTACCATAGGTCTGCGTGGACTGATCAACCTGGGGAACACGTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
||
| 3UTR GCA 72 bp | AACACAGAATGGAGGCAAGCGGGTGACACTATGCAATaGAGTCTCCAACTGGACCTCAGCTTCAAATCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: NTEWRQAGDTMQ*SLQLDLSFKSH Trigger: GTGAGATTTGAAGCTGAGGTCCAGTTGGAGACTGCATTGCATAGTGTCACCCGCTTGCCTCCATTCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | GGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTaGTCAGAAGTGGACAGCCTAGGCTTGTCCAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GMRRNTKTLDSS*SEVDSLGLSRD Trigger: ATCTCTGGACAAGCCTAGGCTGTCCACTTCTGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | GTACAATTGGAGGTGATCTTCCGCCTCTTTGGGTTATaGTTCAGCAGTTCCAGCTCCCGTTTAGTTGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VQLEVIFRLFGL*FSSSSSRLVGS Trigger: GGAACCAACTAAACGGGAGCTGGAACTGCTGAAGCATAACCCAAAGAGGCGGAAGATCACCTCCAATTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
||
| 3UTR CCA 72 bp | GGCAAGCGGGTGACACTATGCAATGCAGTCTCCAACTaGACCTCAGCTTCAAATCTCACACAGTCACTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GKRVTLCNAVSN*TSASNLTQSLN Trigger: GTTTAGTGACTGTGTGAGATTTGAAGCTGAGGTCCAGTTGGAGACTGCATTGCATAGTGTCACCCGCTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR TCA 72 bp | CAGCAGTTCCAGCTCCCGTTTAGTTGGTTCCCAAGTTaGAAACTTCTCTCCAACACCTTGCATCTTCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QQFQLPFSWFPS*KLLSNTLHLPS Trigger: GCTTGGAAGATGCAAGGTGTTGGAGAGAAGTTTTCAACTTGGGAACCAACTAAACGGGAGCTGGAACTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
||
| 3UTR GCA 72 bp | GGAGGATTGGGTCAATGGAGCCACCAAGGAATCTACTaGAAAGATCAAGATACCAGGGACTCTGATATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GGLGQWSHQGIY*KDQDTRDSDIC Trigger: GCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CCA 72 bp | GTTATCTGTAGGACAGATGTATTTGTAGCCTGTGGGTaGCCTCAACCTGGGCCTGGGGCTATCTTACAATTT | + |
|
Preference number: 3 (lower is better) Translates to: VICRTDVFVACG*PQPGPGAILQF Trigger: AAATTGTAAGATAGCCCCAGGCCCAGGTTGAGGCCACCCACAGGCTACAAATACATCTGTCCTACAGATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CCA 72 bp | GGCAGGCAAAAAGACCAAGAAGAAACATGGGAGGATTaGGTCAATGGAGCCACCAAGGAATCTACTGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRQKDQEETWED*VNGATKESTAK Trigger: CTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCCCATGTTTCTTCTTGGTCTTTTTGCCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CCA 72 bp | CTCAGCTTCAAATCTCACACAGTCACTAAACCTCCCTaGGCAGGCAAAAAGACCAAGAAGAAACATGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSFKSHTVTKPP*AGKKTKKKHGR Trigger: CCTCCCATGTTTCTTCTTGGTCTTTTTGCCTGCCCAGGGAGGTTTAGTGACTGTGTGAGATTTGAAGCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTGCTCAATCATGTCGGGAAGTTaGCCAACTTGCTCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: WKGSGMRRNTKTLDSSCSIMSGS*PTCSLS Trigger: AGAGAGAGAGCAAGTTGGCAAACTTCCCGACATGAT...TGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR TCA 72 bp | GAACTGGTAATGGAGCCTTCCTATTCTGGCTGTAACTaGAACTATAGTGAACACAGAATGGAGGCAAGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: ELVMEPSYSGCN*NYSEHRMEASG Trigger: CCCGCTTGCCTCCATTCTGTGTTCACTATAGTTTCAGTTACAGCCAGAATAGGAAGGCTCCATTACCAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | CTATCTTACAATTTTAGAAAGAAGAGACATACCCTCTaGCCTTCATGCCAGAGGGCTGCTGCTGCAAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: LSYNFRKKRHTL*PSCQRAAAAST Trigger: AGTGCTTGCAGCAGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGTAAGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR GCA 72 bp | CTTCAGGAAGCTTGGAGCTCTGGTTCCCGTGGCAACTaGAGTGAAGTTTTTCATGTGGACTTGTTCACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LQEAWSSGSRGN*SEVFHVDLFTN Trigger: ATTTGTGAACAAGTCCACATGAAAAACTTCACTGCAGTTGCCACGGGAACCAGAGCTCCAAGCTTCCTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CCA 72 bp | GACAGATGTATTTGTAGCCTGTGGGTGGCCTCAACCTaGGCCTGGGGCTATCTTACAATTTTAGAAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: DRCICSLWVAST*AWGYLTILERR Trigger: TCTTCTTTCTAAAATTGTAAGATAGCCCCAGGCCCAGGTTGAGGCCACCCACAGGCTACAAATACATCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CCA 72 bp | AAAAGACCAAGAAGAAACATGGGAGGATTGGGTCAATaGAGCCACCAAGGAATCTACTGCAAAGATCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KRPRRNMGGLGQ*SHQGIYCKDQD Trigger: ATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCCCATGTTTCTTCTTGGTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR GCA 90 bp | CACCACTGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTGCCAGGTGCCGGGCGTaGGTCCACACCAGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HHWKGSGMRRNTKTLDSSARCRA*VHTRCS Trigger: GCTGCACCTGGTGTGGACGCACGCCCGGCACCTGGC...ACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCAGTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGTTCTAGGATGAGGAACCCTTTTCCTGCCTTGCTATCCAGAGGGGCAACTTGCAGCCGGTTCAGGTaGATGCCGCAGACATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGSRMRNPFPALLSRGATCSRFR*MPQTWQ Trigger: CTGCCATGTCTGCGGCATCCACCTGAACCGGCTGCA...AGTTGCCCCTCTGGATAGCAAGGCAGGAAAAGGGTTCCTCATCCTAGAACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTGCAAGCACTCTGCCCTCTGGCATCATCTCTGCCCACTCTACAGCTTGTGGTGGAGACCCCGTaGCAGACTTGGCATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQALCPLASSLPTLQLVVETP*QTWHVT Trigger: TGTTACATGCCAAGTCTGCCACGGGGTCTCCACCAC...AAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCTGCAAGCACTCTGCCCTCTGGCATCATCTCTGCCCACTCTACAGCTTCGCCTCTTTGGGTTATaGTTCAGCAGTTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQALCPLASSLPTLQLRLFGL*FSSSSS Trigger: GGAGCTGGAACTGCTGAAGCATAACCCAAAGAGGCG...AAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGAGACCAAGCAGGAGCTaGGGCTCTGCATCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQRPSRS*GSASHS Trigger: GCTGTGAGATGCAGAGCCCCAGCTCCTGCTTGGTCT...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR TCA 90 bp | CACCACTGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTCCAGTTGTCCACCTTaGAGCTGCCCAGGTGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HHWKGSGMRRNTKTLDSSSSCPP*SCPGAS Trigger: GCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGA...ACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCAGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR TCA 90 bp | ACTCCACTCTGCTCATCCCACCTGACACATCTCCTAGTGCAGGCCATGAGGGAGCCGCCGAAGTTTGGCTaGGTGTTCAAATCGTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPLCSSHLTHLLVQAMREPPKFG*VFKSFE Trigger: CTCAAACGATTTGAACACTCAGCCAAACTTCGGCGG...CTCCCTCATGGCCTGCACTAGGAGATGTGTCAGGTGGGATGAGCAGAGTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGATGCATGTGCGGCAGCCATAGAGTTGGCAGACCTTGCTACAGGTACATGCATCTCACAGCGGTaGCTATCCGACAGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPDACAAAIELADLATGTCISQR*LSDRKK Trigger: CTTCTTTCTGTCGGATAGGCACCGCTGTGAGATGCA...TGTACCTGTAGCAAGGTCTGCCAACTCTATGGCTGCCGCACATGCATCTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | GAATCTACTGCAAAGATCAAGATACCAGGGACTCTGATATCTGCCTGGCCACCACTCAGGAGCGGAGTGTaGGTCAGCGCCTGCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: ESTAKIKIPGTLISAWPPLRSGV*VSACTM Trigger: CATCGTGCAGGCGCTGACCCACACTCCGCTCCTGAG...TGGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGATTGGGTCAATGGAGCCACCAAGGAATCTACTGCAAAGATCAAGATACCCCTTTGCAGTGCCGGTaGAGGACGTCCAGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLGQWSHQGIYCKDQDTPLQCR*RTSRAA Trigger: TGCAGCCCTGGACGTCCTCCACCGGCACTGCAAAGG...GGTATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTGCTCAACTGCCCTCGCTCCCTaGGCTCAAGGGCCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: WKGSGMRRNTKTLDSSCSTALAP*AQGPEW Trigger: CCATTCTGGCCCTTGAGCCCAGGGAGCGAGGGCAGT...TGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGCTGTCCAGGGGCTGCTaGTATTGCCCATTCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQLSRGC*YCPFIL Trigger: CAGGATGAATGGGCAATACCAGCAGCCCCTGGACAG...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR TCA 90 bp | ACTAGAGAAGAACAGGGCAACTGTTACCACGTGACAAAGTTTCTGCTGCCCCTGCGTCCAGGGCTGCAATaGGGAACTCATGTGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TREEQGNCYHVTKFLLPLRPGLQ*GTHVRP Trigger: AGGACGCACATGAGTTCCTCATTGCAGCCCTGGACG...CAGGGGCAGCAGAAACTTTGTCACGTGGTAACAGTTGCCCTGTTCTTCTCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR GCA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGATGGCCCGCAGGTTTTaGTTCCAGTTGTCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQMARRF*FQLSTL Trigger: CAAGGTGGACAACTGGAAGCAAAACCTGCGGGCCAT...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | CACCACTGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTAGGGGTCTATGGTGGTaGAGACCCCGTGGCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: HHWKGSGMRRNTKTLDSSRGLWW*RPRGRL Trigger: AAGTCTGCCACGGGGTCTCCACCACCATAGACCCCT...ACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCAGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CAA 72 bp | CTAGGTGGTTCTAGGATGAGGAACCCTTTTCCTGCCTaGCTATCCAGAGGGGCAACTGAAAGAACCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGGSRMRNPFPA*LSRGATERTKP Trigger: GGGCTTGGTTCTTTCAGTTGCCCCTCTGGATAGCAAGGCAGGAAAAGGGTTCCTCATCCTAGAACCACCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGAGAAGAACAGGGCAACTGTTACCACGTGACAAAGTTTCTGCTGCCCCTGTGGATGCCGCAGACATaGCAGACACAGGACTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TREEQGNCYHVTKFLLPLWMPQT*QTQDFA Trigger: GGCAAAGTCCTGTGTCTGCCATGTCTGCGGCATCCA...CAGGGGCAGCAGAAACTTTGTCACGTGGTAACAGTTGCCCTGTTCTTCTCTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTGCAAGCACTCTGCCCTCTGGCATCATCTCTGCCCACTCTACAGCTTGACTTGGCATGGTCATaGATGTGCTTCTTCGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQALCPLASSLPTLQLDLAWS*MCFFVK Trigger: TTTCACGAAGAAGCACATCCATGACCATGCCAAGTC...AAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTGCTCAAGAAGGGGTCTATGGTaGTGGAGACCCCGTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKGSGMRRNTKTLDSSCSRRGLW*WRPRGR Trigger: TCTGCCACGGGGTCTCCACCACCATAGACCCCTTCT...TGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR TCA 90 bp | ACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTGACGTGTTCCCCAGGTTaGTCAGTCCACGCAGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: TILERRDIPSALHARGLLTCSPG*SVHADL Trigger: TAGGTCTGCGTGGACTGATCAACCTGGGGAACACGT...CAGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR TCA 90 bp | TACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTCTTTGTGCTGCCGGATaGAGCTGGTGTAGTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YNFRKKRHTLCPSCQRAALCAAG*SWCSGH Trigger: GTGGCCACTACACCAGCTTCATCCGGCAGCACAAAG...AGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGAGAAGAACAGGGCAACTGTTACCACGTGACAAAGTTTCTGCTGCCCCTGGCATCTTCCAAGCCTTaGGCTGCTCCTCTTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TREEQGNCYHVTKFLLPLASSKP*AAPLWQ Trigger: TTGCCAAAGAGGAGCAGCGCAAGGCTTGGAAGATGC...CAGGGGCAGCAGAAACTTTGTCACGTGGTAACAGTTGCCCTGTTCTTCTCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR TCA 90 bp | TCACTGAGGCCATTTGAAGAGGACTTTAGTCTCCTGTCAAGCTGGCGCCAGCAGAGTTGGTTCCCAAGTTaGAAACTTCTCTCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: SLRPFEEDFSLLSSWRQQSWFPS*KLLSNT Trigger: GGTGTTGGAGAGAAGTTTTCAACTTGGGAACCAACT...CTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCAAATGGCCTCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTGCTCATGCGTCCACACCAGGTaGAGCAGCTTGTATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: WKGSGMRRNTKTLDSSCSCVHTR*SSLYGM Trigger: CATTCCATACAAGCTGCTGCACCTGGTGTGGACGCA...TGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR GCA 90 bp | GAATCTACTGCAAAGATCAAGATACCAGGGACTCTGATATCTGCCTGGCCACCAAGGGGCTGCTGGTATTaGCCATTCATCCTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESTAKIKIPGTLISAWPPRGCWY*PFILLS Trigger: AGAGAGCAGGATGAATGGGCAATACCAGCAGCCCCT...TGGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGATGCATGTGCGGCAGCCATAGAGTTGGCAGACCTTGCTACAGGTACAATGATGCAATTGCAGTaGTTAGGATTGTTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPDACAAAIELADLATGTMMQLQ*LGLLAF Trigger: GAAAGCCAACAATCCTAACCACTGCAATTGCATCAT...TGTACCTGTAGCAAGGTCTGCCAACTCTATGGCTGCCGCACATGCATCTGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | GAATCTACTGCAAAGATCAAGATACCAGGGACTCTGATATCTGCCTGGCCACCAACCCCGTGGCAGACTTaGCATGTAACATCAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESTAKIKIPGTLISAWPPTPWQT*HVTSDW Trigger: CCAGTCTGATGTTACATGCCAAGTCTGCCACGGGGT...TGGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CAA 72 bp | TGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTaGCTCAGAAGTGGACAGCCTAGGCTTGTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WYEEKHQDPRFQ*LRSGQPRLVQR Trigger: TCTCTGGACAAGCCTAGGCTGTCCACTTCTGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR GCA 90 bp | TACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTCATTGTCATCACCTTTaGAGTGCCGGTGGAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: YNFRKKRHTLCPSCQRAAHCHHL*SAGGGR Trigger: ACGTCCTCCACCGGCACTGCAAAGGTGATGACAATG...AGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGATTGGGTCAATGGAGCCACCAAGGAATCTACTGCAAAGATCAAGATACCATTGCCCATTCATCCTaGTCTCTTTGCTGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLGQWSHQGIYCKDQDTIAHSS*SLCWRP Trigger: TGGCCTCCAGCAAAGAGAGCAGGATGAATGGGCAAT...GGTATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | GACAGCCTAGGCTTGTCCAGAGATACATGCAAAATATCTTACAATAAACTTCATCCAGCTCAGCGTCCATaGCCTCGACCTCAGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DSLGLSRDTCKISYNKLHPAQRP*PRPQAP Trigger: CGGAGCCTGAGGTCGAGGCCATGGACGCTGAGCTGG...ATGAAGTTTATTGTAAGATATTTTGCATGTATCTCTGGACAAGCCTAGGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | CACCACTGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTCGCTTTGACTTGGCATaGTCATGGATGTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHWKGSGMRRNTKTLDSSRFDLA*SWMCFF Trigger: GAAGAAGCACATCCATGACCATGCCAAGTCAAAGCG...ACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCAGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGAGCAAGACACGCTCTCAGAGGGGAGAGAATCATCTAGAATTCCGTATGTGCAGCAGCTTGTATaGAATGTGTGGGGAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKEQDTLSEGRESSRIPYVQQLV*NVWGAV Trigger: CACCGCTCCCCACACATTCCATACAAGCTGCTGCAC...ATACGGAATTCTAGATGATTCTCTCCCCTCTGAGAGCGTGTCTTGCTCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CAA 72 bp | GGGCAGGCAAAAAGACCAAGAAGAAACATGGGAGGATaGGGTCAATGGAGCCACCAAGGAATCTACTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQAKRPRRNMGG*GQWSHQGIYCK Trigger: TTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCCCATGTTTCTTCTTGGTCTTTTTGCCTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | GAATCTACTGCAAAGATCAAGATACCAGGGACTCTGATATCTGCCTGGCCACCAGATCTTCCGCCTCTTTaGGTTATGCTTCAGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESTAKIKIPGTLISAWPPDLPPL*VMLQQF Trigger: GAACTGCTGAAGCATAACCCAAAGAGGCGGAAGATC...TGGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTGCTCAAGTGTTCAAATCGTTTaGGATGGAAACAGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: WKGSGMRRNTKTLDSSCSSVQIV*DGNRPQ Trigger: TTGTGGCCTGTTTCCATCTCAAACGATTTGAACACT...TGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR TCA 90 bp | TCAAAAGAGCAAGACACGCTCTCAGAGGGGAGAGAATCATCTAGAATTCCGTATATTTGTTGTCATTGTTaGGACTGTCCAGGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKEQDTLSEGRESSRIPYICCHC*DCPGAA Trigger: AGCAGCCCCTGGACAGTCTCAACAATGACAACAAAT...ATACGGAATTCTAGATGATTCTCTCCCCTCTGAGAGCGTGTCTTGCTCTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CAA 72 bp | GAAAACTTCTCTCCAACACCTTGCATCTTCCAAGCCTaGCGCTGCTCCTCTTTGGCAATGATTTCTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ENFSPTPCIFQA*RCSSLAMISMS Trigger: AGACATAGAAATCATTGCCAAAGAGGAGCAGCGCAAGGCTTGGAAGATGCAAGGTGTTGGAGAGAAGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174301.8 |
||
| CDS-3UTR CCA 90 bp | GACAGCCTAGGCTTGTCCAGAGATACATGCAAAATATCTTACAATAAACTTCATGCTCAAGGGCCAGAATaGGGTAGAAGAACCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSLGLSRDTCKISYNKLHAQGPE*GRRTGK Trigger: CTTCCCGGTTCTTCTACCCCATTCTGGCCCTTGAGC...ATGAAGTTTATTGTAAGATATTTTGCATGTATCTCTGGACAAGCCTAGGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGAGCAAGACACGCTCTCAGAGGGGAGAGAATCATCTAGAATTCCGTATTCAAATCGTTTGAGATaGAAACAGGCCACAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKEQDTLSEGRESSRIPYSNRLR*KQATMG Trigger: GCCCATTGTGGCCTGTTTCCATCTCAAACGATTTGA...ATACGGAATTCTAGATGATTCTCTCCCCTCTGAGAGCGTGTCTTGCTCTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR TCA 90 bp | GACAGCCTAGGCTTGTCCAGAGATACATGCAAAATATCTTACAATAAACTTCATGGATGTGCTTCTTCGTaGAACAGCCAAAGAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: DSLGLSRDTCKISYNKLHGCASS*NSQRRH Trigger: GTGTCTTCTTTGGCTGTTTCACGAAGAAGCACATCC...ATGAAGTTTATTGTAAGATATTTTGCATGTATCTCTGGACAAGCCTAGGCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| 3UTR CAA 72 bp | CTAGATTCCAGTTGCTCAGAAGTGGACAGCCTAGGCTaGTCCAGAGATACATGCAAAATATCTTACAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSSCSEVDSLG*SRDTCKISYNK Trigger: TTTATTGTAAGATATTTTGCATGTATCTCTGGACAAGCCTAGGCTGTCCACTTCTGAGCAACTGGAATCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS GCA 90 bp | GCCCGCAGGTTTTGCTTCCAGTTGTCCACCTTGAAGCTGCCCAGGTaGGAGCAGCCAGGCGGCGGTACCGCCAGCTCAGCGTCCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARRFCFQLSTLKLPR*EQPGGGTASSASMA Trigger: GGCCATGGACGCTGAGCTGGCGGTACCGCCGCCTGGCTGCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAAAACCTGCGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTCTAGGATGAGGAACCCTTTTCCTGCCTTGCTATCCAGAGGGGCAACTTGCATCTTCCAAGCCTaGCGCTGCTCCTCTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGSRMRNPFPALLSRGATCIFQA*RCSSLA Trigger: TGCCAAAGAGGAGCAGCGCAAGGCTTGGAAGATGCA...AGTTGCCCCTCTGGATAGCAAGGCAGGAAAAGGGTTCCTCATCCTAGAACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTCTAGGATGAGGAACCCTTTTCCTGCCTTGCTATCCAGAGGGGCAACTTTCATCCTGCTCTCTTaGCTGGAGGCCATGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGSRMRNPFPALLSRGATFILLS*LEAMKG Trigger: GCCCTTCATGGCCTCCAGCAAAGAGAGCAGGATGAA...AGTTGCCCCTCTGGATAGCAAGGCAGGAAAAGGGTTCCTCATCCTAGAACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGATTGGGTCAATGGAGCCACCAAGGAATCTACTGCAAAGATCAAGATACCGGCAGACACAGGACTTaGCCTTGCGCTTGCGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGLGQWSHQGIYCKDQDTGRHRT*PCACEP Trigger: AGGCTCGCAAGCGCAAGGCAAAGTCCTGTGTCTGCC...GGTATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CAA 90 bp | ACTAGAGAAGAACAGGGCAACTGTTACCACGTGACAAAGTTTCTGCTGCCCCTGGATGGCCCGCAGGTTTaGCTTCCAGTTGTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: TREEQGNCYHVTKFLLPLDGPQV*LPVVHL Trigger: AAGGTGGACAACTGGAAGCAAAACCTGCGGGCCATC...CAGGGGCAGCAGAAACTTTGTCACGTGGTAACAGTTGCCCTGTTCTTCTCTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CAA 90 bp | TACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTTTCCAGTTGTCCACCTaGAAGCTGCCCAGGTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: YNFRKKRHTLCPSCQRAAFQLST*KLPRCE Trigger: CTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAA...AGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CAA 90 bp | TACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTCACGTGTTCCCCAGGTaGATCAGTCCACGCAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: YNFRKKRHTLCPSCQRAAHVFPR*ISPRRP Trigger: AGGTCTGCGTGGACTGATCAACCTGGGGAACACGTG...AGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
||
| CDS-3UTR CAA 90 bp | ACTAGAGAAGAACAGGGCAACTGTTACCACGTGACAAAGTTTCTGCTGCCCCTGCTGCTTTGTGGACTCTaGGTAGCTATGGCAACCGCT | + |
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Preference number: 5 (lower is better) Translates to: TREEQGNCYHVTKFLLPLLLCGL*VAMATA Trigger: AGCGGTTGCCATAGCTACCAAGAGTCCACAAAGCAG...CAGGGGCAGCAGAAACTTTGTCACGTGGTAACAGTTGCCCTGTTCTTCTCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS-3UTR CAA 90 bp | TACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTCAGGGGCTGCTGGTATaGCCCATTCATCCTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: YNFRKKRHTLCPSCQRAAQGLLV*PIHPAL Trigger: GAGAGCAGGATGAATGGGCAATACCAGCAGCCCCTG...AGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS-3UTR CAA 90 bp | TACAATTTTAGAAAGAAGAGACATACCCTCTGCCCTTCATGCCAGAGGGCTGCTACCAGGTGCAGCAGCTaGTATGGAATGTGTGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: YNFRKKRHTLCPSCQRAATRCSS*YGMCGE Trigger: CTCCCCACACATTCCATACAAGCTGCTGCACCTGGT...AGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS-3UTR CAA 90 bp | GGTGGTTCTAGGATGAGGAACCCTTTTCCTGCCTTGCTATCCAGAGGGGCAACTTTGCAGTGGTTAGGATaGTTGGCTTTCTTCCCATTG | + |
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Preference number: 5 (lower is better) Translates to: GGSRMRNPFPALLSRGATLQWLG*LAFFPL Trigger: CAATGGGAAGAAAGCCAACAATCCTAACCACTGCAA...AGTTGCCCCTCTGGATAGCAAGGCAGGAAAAGGGTTCCTCATCCTAGAACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS-3UTR CAA 90 bp | GGAGGATTGGGTCAATGGAGCCACCAAGGAATCTACTGCAAAGATCAAGATACCTCTTTGATGCTGGCCTaGGTGATAATGGCGTCATCA | + |
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Preference number: 5 (lower is better) Translates to: GGLGQWSHQGIYCKDQDTSLMLA*VIMASS Trigger: TGATGACGCCATTATCACCAAGGCCAGCATCAAAGA...GGTATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS-3UTR CAA 90 bp | CACCACTGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTTGGTCAATGATGCAATaGCAGTGGTTAGGATTGTTG | + |
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Preference number: 5 (lower is better) Translates to: HHWKGSGMRRNTKTLDSSWSMMQ*QWLGLL Trigger: CAACAATCCTAACCACTGCAATTGCATCATTGACCA...ACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCAGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS-3UTR CAA 90 bp | CACCACTGGAAAGGCAGTGGTATGAGGAGAAACACCAAGACCCTAGATTCCAGTGCAAACAGGGAGTATTaGTTGTCATTGTTGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: HHWKGSGMRRNTKTLDSSANREY*LSLLRL Trigger: CAGTCTCAACAATGACAACAAATACTCCCTGTTTGC...ACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCAGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS TCA 72 bp | AGATGGCCCGCAGGTTTTGCTTCCAGTTGTCCACCTTaGAGCTGCCCAGGTGCGAGCAGCCAGGCGGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: RWPAGFASSCPP*SCPGASSQAAV Trigger: TACCGCCGCCTGGCTGCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAAAACCTGCGGGCCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS CCA 72 bp | CGCAGGCAGTCTGTGAGAGTGGTGGTCCCGGATGCATaGCTCTCCCCATTAACCACACTGCCCTCGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RRQSVRVVVPDA*LSPLTTLPSLP Trigger: AGGGAGCGAGGGCAGTGTGGTTAATGGGGAGAGCCATGCATCCGGGACCACCACTCTCACAGACTGCCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS CCA 72 bp | CAAGAGTGCAGCCGGTTCAGGTGGATGCCGCAGACATaGCAGACACAGGACTTTGCCTTGCGCTTGCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: QECSRFRWMPQT*QTQDFALRLRA Trigger: GGCTCGCAAGCGCAAGGCAAAGTCCTGTGTCTGCCATGTCTGCGGCATCCACCTGAACCGGCTGCACTCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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| CDS CCA 72 bp | ATGGCTCTCCCCATTAACCACACTGCCCTCGCTCCCTaGGCTCAAGGGCCAGAATGGGGTAGAAGAACCGGG | + |
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Preference number: 6 (lower is better) Translates to: MALPINHTALAP*AQGPEWGRRTG Trigger: CCCGGTTCTTCTACCCCATTCTGGCCCTTGAGCCCAGGGAGCGAGGGCAGTGTGGTTAATGGGGAGAGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041683.9 |
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